AT2G44100

guanosine nucleotide diphosphate dissociation inhibitor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
18241469 .. 18245008
3540 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G44100.2

Sequence Viewer

Length: 1338 bp
ATGGATGAAGAGTACGAAGTCATAGTTCTGGGTACTGGTCTCAAGGAGTGCATCCTTAGTGGTCTTCTCTCCGTCGATGGTCTTAAGGTACTTCACATGGACAGGAATGACTACTACGGTGGAGAGTCAACTTCTCTTAATCTCAATCAGCTGTGGAAGAAGTTCAGGGGAGAAGAGAAGGCTCCTGCTCATTTAGGTTCTAGCAGAGACTACAATGTTGACATGATGCCAAAGTTTATGATGGCTAACGGAAAGCTTGTTCGTGTCCTTATTCATACGGATGTGACCAAGTACTTGTCTTTTAAAGCTGTTGATGGAAGCTATGTTTTTGTCCAAGGCAAGGTCCAAAAAGTGCCAGCAACTCCCATGGAGGCCCTCAAATCTCCTCTTATGGGTATTTTTGAGAAACGTCGAGCTGGAAAGTTTTTCAGCTATGTTCAAGAATACGACGAGAAGGACCCAAAAACACATGATGGAATGGATTTGAGGAGAGTTACAACTAAGGATTTGATTGCGAAATTCGGTCTTAAAGAAGATACTATTGACTTTATTGGTCATGCAGTGGCACTTCACTGTAATGACAATCATCTCCATCAACCTGCCTATGATACTGTAATGAGAATGAAGCTCTACGCAGAGTCCCTTGCACGTTTTCAAGGAGGTTCACCATATATCTATCCTCTCTATGGGTTGGGAGAATTGCCTCAGGCATTTGCACGACTTAGTGCTGTCTATGGTGGGACGTATATGTTGAACAAACCTGAGTGCAAGGTAGAGTTTGACGAGGAGGGTAAGGTTTCTGGTGTTACATCTGAGGGAGAGACTGCCAAATGCAAGAAAGTTGTCTGCGATCCTTCTTACCTAACCAACAAGGTCAGGAAGATTGGCAGGGTTGCTCGGGCGATTGCCATTATGAGCCACCCTATTCCAAACACCAATGATTCTCAGTCGGTGCAAGTCATTCTACCCCAAAAACAATTGGGCCGCAAATCAGACATGTATGTCTTCTGTTGTTCATATTCACACAACGTTGCTCCCAAGGGAAAGTTCATAGCATTTGTGTCAACAGACGCTGAAACTGATAACCCTCAAACCGAGCTCCAGCCTGGAATCGACCTTCTTGGTCCTGTTGATGAGCTGTTCTTCGACATCTATGATAGATATGAGCCTGTCAACGAACCCACTTTGGACAACTGCTTCATATCAACGAGTTATGATGCTACAACACACTTTGACACAACTGTTGTTGATGTGTTGAACATGTATAAATTGATCACCGGAAAGGAACTGGATCTAAGTGTGGATCTTAACGCAGCTAGTGCTGCAGAGGAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001558 GO:0003674 GO:0005092 GO:0005093 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007275 GO:0007399 GO:0008150 GO:0008361 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010771 GO:0010975 GO:0010976 GO:0010977 GO:0016043 GO:0017016 GO:0017137 GO:0019899 GO:0022008 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030154 GO:0030234 GO:0030307 GO:0030424 GO:0030516 GO:0030695 GO:0031267 GO:0031344 GO:0031345 GO:0031346 GO:0032386 GO:0032387 GO:0032482 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032880 GO:0032991 GO:0033157 GO:0035556 GO:0036477 GO:0040008 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043209 GO:0044297 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045666 GO:0045773 GO:0045927 GO:0048046 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050769 GO:0050770 GO:0050771 GO:0050772 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051128 GO:0051129 GO:0051130 GO:0051223 GO:0051224 GO:0051239 GO:0051240 GO:0051241 GO:0051592 GO:0051716 GO:0051960 GO:0051961 GO:0051962 GO:0055044 GO:0060284 GO:0060341 GO:0060589 GO:0061387 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071840 GO:0090066 GO:0090087 GO:0090313 GO:0090315 GO:0090317 GO:0097458 GO:0098772 GO:0120025 GO:0120035 GO:1903533 GO:1903827 GO:1903828 GO:1904950 GO:1905475 GO:1905476 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

445

Amino Acids

49.82

Weight (kDa)

5.49

Isoelectric Point (pI)

34.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDI PF00996 1 - 430 3.8e-226 GDP dissociation inhibitor
Amino_oxidase PF01593 95 - 283 9.7e-07 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1001
Acc36I ACCTGC 1 cut(s) 607
AciI CCGC 1 cut(s) 985
AclI AACGTT 1 cut(s) 1029
AclWI GGATC 3 cut(s) 845, 1299, 1311
AcsI RAATTY 1 cut(s) 518
AfaI GTAC 4 cut(s) 14, 34, 90, 293
AfiI CCNNNNNNNGG 3 cut(s) 340, 392, 686
AflII CTTAAG 1 cut(s) 83
AflIII ACRYGT 2 cut(s) 996, 1260
AgsI TTSAA 4 cut(s) 440, 656, 754, 1258
AjnI CCWGG 1 cut(s) 1105
AjuI GAANNNNNNNTTGG 2 cut(s) 1031, 1063
AloI GAACNNNNNNTCC 2 cut(s) 243, 275
Alw21I GWGCWC 1 cut(s) 1101
Alw26I GTCTC 3 cut(s) 44, 201, 815
AlwI GGATC 3 cut(s) 845, 1299, 1311
AlwNI CAGNNNCTG 1 cut(s) 1073
Ama87I CYCGRG 1 cut(s) 897
AoxI GGCC 2 cut(s) 372, 982
ApeKI GCWGC 2 cut(s) 1313, 1322
ApoI RAATTY 1 cut(s) 518
Asp700I GAANNNNTTC 1 cut(s) 161
AspS9I GGNCC 5 cut(s) 343, 373, 457, 982, 1124
AsuHPI GGTGA 2 cut(s) 657, 1267
AvaI CYCGRG 1 cut(s) 897
AvaII GGWCC 3 cut(s) 343, 457, 1124
AxyI CCTNAGG 1 cut(s) 705
BanII GRGCYC 1 cut(s) 1101
BbsI GAAGAC 2 cut(s) 56, 997
Bbv12I GWGCWC 1 cut(s) 1101
BbvI GCAGC 2 cut(s) 1309, 1325
BccI CCATC 5 cut(s) 71, 235, 308, 467, 600
BciT130I CCWGG 1 cut(s) 1107
BclI TGATCA 1 cut(s) 1272
BcoDI GTCTC 3 cut(s) 44, 201, 815
BfaI CTAG 2 cut(s) 201, 1317
BfmI CTRYAG 1 cut(s) 1323
BfrI CTTAAG 1 cut(s) 83
BfuAI ACCTGC 1 cut(s) 607
BisI GCNGC 3 cut(s) 985, 1314, 1323
BlsI GCNGC 3 cut(s) 986, 1315, 1324
BmcAI AGTACT 1 cut(s) 293
Bme1390I CCNGG 1 cut(s) 1107
Bme18I GGWCC 3 cut(s) 343, 457, 1124
BmeT110I CYCGRG 1 cut(s) 897
BmgT120I GGNCC 5 cut(s) 343, 373, 457, 982, 1124
BmiI GGNNCC 2 cut(s) 183, 459
BmrFI CCNGG 1 cut(s) 1107
BmsI GCATC 3 cut(s) 60, 216, 1207
BpiI GAAGAC 2 cut(s) 56, 997
BpmI CTGGAG 1 cut(s) 1085
BpuEI CTTGAG 1 cut(s) 26
BsaI GGTCTC 1 cut(s) 44
BsaJI CCNNGG 3 cut(s) 334, 366, 1038
BsaWI WCCGGW 1 cut(s) 1277
Bsc4I CCNNNNNNNGG 3 cut(s) 340, 392, 686
Bse1I ACTGG 2 cut(s) 40, 1293
Bse21I CCTNAGG 1 cut(s) 705
BseBI CCWGG 1 cut(s) 1107
BseDI CCNNGG 3 cut(s) 334, 366, 1038
BseGI GGATG 3 cut(s) 10, 51, 286
BseLI CCNNNNNNNGG 3 cut(s) 340, 392, 686
BseMII CTCAG 4 cut(s) 719, 753, 804, 959
BseNI ACTGG 2 cut(s) 40, 1293
BseRI GAGGAG 3 cut(s) 375, 502, 800
BseXI GCAGC 2 cut(s) 1309, 1325
BshFI GGCC 2 cut(s) 374, 984
BsiHKAI GWGCWC 1 cut(s) 1101
BsiHKCI CYCGRG 1 cut(s) 897
BsiSI CCGG 1 cut(s) 1278
BslFI GGGAC 2 cut(s) 625, 754
BslI CCNNNNNNNGG 3 cut(s) 340, 392, 686
BsmAI GTCTC 3 cut(s) 44, 201, 815
BsmFI GGGAC 2 cut(s) 625, 754
BsnI GGCC 2 cut(s) 374, 984
Bso31I GGTCTC 1 cut(s) 44
BsoBI CYCGRG 1 cut(s) 897
Bsp1286I GDGCHC 1 cut(s) 1101
Bsp143I GATC 4 cut(s) 850, 1272, 1291, 1303
Bsp19I CCATGG 1 cut(s) 366
BspACI CCGC 1 cut(s) 985
BspANI GGCC 2 cut(s) 374, 984
BspCNI CTCAG 4 cut(s) 718, 754, 805, 958
BspLI GGNNCC 2 cut(s) 183, 459
BspMAI CTGCAG 1 cut(s) 1327
BspMI ACCTGC 1 cut(s) 607
BspPI GGATC 3 cut(s) 845, 1299, 1311
BspTI CTTAAG 1 cut(s) 83
BspTNI GGTCTC 1 cut(s) 44
BsrI ACTGG 2 cut(s) 40, 1293
BssECI CCNNGG 3 cut(s) 334, 366, 1038
BssMI GATC 4 cut(s) 850, 1272, 1291, 1303
BssT1I CCWWGG 3 cut(s) 334, 366, 1038
Bst2UI CCWGG 1 cut(s) 1107
Bst4CI ACNGT 4 cut(s) 119, 575, 613, 1243
Bst6I CTCTTC 2 cut(s) 3, 168
BstAFI CTTAAG 1 cut(s) 83
BstAPI GCANNNNNTGC 1 cut(s) 1319
BstC8I GCNNGC 1 cut(s) 357
BstDEI CTNAG 8 cut(s) 56, 501, 705, 722, 762, 813, 945, 1295
BstDSI CCRYGG 1 cut(s) 366
BstF5I GGATG 3 cut(s) 10, 51, 286
BstKTI GATC 4 cut(s) 853, 1275, 1294, 1306
BstMAI GTCTC 3 cut(s) 44, 201, 815
BstMBI GATC 4 cut(s) 850, 1272, 1291, 1303
BstMWI GCNNNNNNNGC 2 cut(s) 1319, 1322
BstNI CCWGG 1 cut(s) 1107
BstNSI RCATGY 2 cut(s) 1000, 1264
BstSCI CCNGG 1 cut(s) 1105
BstSFI CTRYAG 1 cut(s) 1323
BstV1I GCAGC 2 cut(s) 1309, 1325
BstV2I GAAGAC 2 cut(s) 56, 997
BstX2I RGATCY 2 cut(s) 1291, 1303
BstYI RGATCY 2 cut(s) 1291, 1303
Bsu36I CCTNAGG 1 cut(s) 705
BsuRI GGCC 2 cut(s) 374, 984
BtgI CCRYGG 1 cut(s) 366
BtsCI GGATG 3 cut(s) 10, 51, 286
BtsI GCAGTG 1 cut(s) 567
BtsIMutI CAGTG 2 cut(s) 567, 571
BveI ACCTGC 1 cut(s) 607
Cac8I GCNNGC 1 cut(s) 357
CaiI CAGNNNCTG 1 cut(s) 1073
Cfr13I GGNCC 5 cut(s) 343, 373, 457, 982, 1124
CseI GACGC 1 cut(s) 1079
Csp6I GTAC 4 cut(s) 13, 33, 89, 292
CviAII CATG 7 cut(s) 97, 223, 367, 470, 557, 997, 1261
CviQI GTAC 4 cut(s) 13, 33, 89, 292
DdeI CTNAG 8 cut(s) 56, 501, 705, 722, 762, 813, 945, 1295
DpnI GATC 4 cut(s) 852, 1274, 1293, 1305
DpnII GATC 4 cut(s) 850, 1272, 1291, 1303
DraI TTTAAA 1 cut(s) 304
DrdI GACNNNNNNGTC 1 cut(s) 1001
DseDI GACNNNNNNGTC 1 cut(s) 1001
Eam1104I CTCTTC 2 cut(s) 3, 168
EarI CTCTTC 2 cut(s) 3, 168
Ecl136II GAGCTC 1 cut(s) 1099
Eco130I CCWWGG 3 cut(s) 334, 366, 1038
Eco24I GRGCYC 1 cut(s) 1101
Eco31I GGTCTC 1 cut(s) 44
Eco47I GGWCC 3 cut(s) 343, 457, 1124
Eco53kI GAGCTC 1 cut(s) 1099
Eco81I CCTNAGG 1 cut(s) 705
Eco88I CYCGRG 1 cut(s) 897
EcoICRI GAGCTC 1 cut(s) 1099
EcoO109I RGGNCCY 2 cut(s) 373, 457
EcoRII CCWGG 1 cut(s) 1105
EcoT14I CCWWGG 3 cut(s) 334, 366, 1038
EcoT38I GRGCYC 1 cut(s) 1101
ErhI CCWWGG 3 cut(s) 334, 366, 1038
FaeI CATG 7 cut(s) 100, 226, 370, 473, 560, 1000, 1264
FaqI GGGAC 2 cut(s) 625, 754
FatI CATG 7 cut(s) 96, 222, 366, 469, 556, 996, 1260
FbaI TGATCA 1 cut(s) 1272
Fnu4HI GCNGC 3 cut(s) 985, 1314, 1323
FokI GGATG 3 cut(s) 17, 38, 293
FriOI GRGCYC 1 cut(s) 1101
Fsp4HI GCNGC 3 cut(s) 985, 1314, 1323
FspBI CTAG 2 cut(s) 201, 1317
GluI GCNGC 3 cut(s) 985, 1314, 1323
GsuI CTGGAG 1 cut(s) 1085
HaeIII GGCC 2 cut(s) 374, 984
HapII CCGG 1 cut(s) 1278
HgaI GACGC 1 cut(s) 1079
Hin1II CATG 7 cut(s) 100, 226, 370, 473, 560, 1000, 1264
HincII GTYRAC 4 cut(s) 129, 220, 1065, 1174
HindII GTYRAC 4 cut(s) 129, 220, 1065, 1174
HindIII AAGCTT 1 cut(s) 254
HinfI GANTC 4 cut(s) 125, 638, 941, 1110
HpaII CCGG 1 cut(s) 1278
HphI GGTGA 2 cut(s) 657, 1267
Hpy166II GTNNAC 5 cut(s) 129, 220, 665, 1065, 1174
Hpy188I TCNGA 2 cut(s) 814, 994
Hpy188III TCNNGA 2 cut(s) 440, 877
Hpy8I GTNNAC 5 cut(s) 129, 220, 665, 1065, 1174
Hpy99I CGWCG 3 cut(s) 77, 414, 452
HpyAV CCTTC 4 cut(s) 172, 448, 864, 1127
HpyCH4III ACNGT 4 cut(s) 119, 575, 613, 1243
HpyCH4IV ACGT 4 cut(s) 409, 649, 743, 1029
HpyCH4V TGCA 8 cut(s) 51, 560, 647, 716, 768, 834, 955, 1325
HpyF10VI GCNNNNNNNGC 2 cut(s) 1319, 1322
HpyF3I CTNAG 8 cut(s) 56, 501, 705, 722, 762, 813, 945, 1295
HpySE526I ACGT 4 cut(s) 409, 649, 743, 1029
Hsp92II CATG 7 cut(s) 100, 226, 370, 473, 560, 1000, 1264
Ksp22I TGATCA 1 cut(s) 1272
Kzo9I GATC 4 cut(s) 850, 1272, 1291, 1303
LmnI GCTCC 3 cut(s) 187, 1039, 1104
Lsp1109I GCAGC 2 cut(s) 1309, 1325
LweI GCATC 3 cut(s) 60, 216, 1207
MaeI CTAG 2 cut(s) 201, 1317
MaeII ACGT 4 cut(s) 409, 649, 743, 1029
MaeIII GTNAC 3 cut(s) 283, 493, 805
MalI GATC 4 cut(s) 852, 1274, 1293, 1305
MboI GATC 4 cut(s) 850, 1272, 1291, 1303
MboII GAAGA 8 cut(s) 20, 56, 169, 185, 545, 892, 997, 1135
MfeI CAATTG 1 cut(s) 977
MflI RGATCY 2 cut(s) 1291, 1303
MhlI GDGCHC 1 cut(s) 1101
MluCI AATT 4 cut(s) 518, 698, 977, 1268
MlyI GAGTC 2 cut(s) 134, 647
MroXI GAANNNNTTC 1 cut(s) 161
MseI TTAA 5 cut(s) 84, 138, 303, 528, 1308
MslI CAYNNNNRTG 2 cut(s) 279, 576
MspA1I CMGCKG 1 cut(s) 151
MspCI CTTAAG 1 cut(s) 83
MspI CCGG 1 cut(s) 1278
MspR9I CCNGG 1 cut(s) 1107
MunI CAATTG 1 cut(s) 977
MvaI CCWGG 1 cut(s) 1107
MwoI GCNNNNNNNGC 2 cut(s) 1319, 1322
NcoI CCATGG 1 cut(s) 366
NdeII GATC 4 cut(s) 850, 1272, 1291, 1303
NlaIII CATG 7 cut(s) 100, 226, 370, 473, 560, 1000, 1264
NlaIV GGNNCC 2 cut(s) 183, 459
NmuCI GTSAC 1 cut(s) 283
NspI RCATGY 2 cut(s) 1000, 1264
PciI ACATGT 2 cut(s) 996, 1260
PdmI GAANNNNTTC 1 cut(s) 161
PfeI GAWTC 2 cut(s) 941, 1110
PkrI GCNGC 3 cut(s) 986, 1315, 1324
PleI GAGTC 2 cut(s) 133, 646
PpsI GAGTC 2 cut(s) 133, 646
PpuMI RGGWCCY 1 cut(s) 457
PscI ACATGT 2 cut(s) 996, 1260
Psp124BI GAGCTC 1 cut(s) 1101
Psp1406I AACGTT 1 cut(s) 1029
Psp5II RGGWCCY 1 cut(s) 457
Psp6I CCWGG 1 cut(s) 1105
PspGI CCWGG 1 cut(s) 1105
PspN4I GGNNCC 2 cut(s) 183, 459
PspPI GGNCC 5 cut(s) 343, 373, 457, 982, 1124
PspPPI RGGWCCY 1 cut(s) 457
PstI CTGCAG 1 cut(s) 1327
PstNI CAGNNNCTG 1 cut(s) 1073
PsuI RGATCY 2 cut(s) 1291, 1303
PvuII CAGCTG 1 cut(s) 151
RsaI GTAC 4 cut(s) 14, 34, 90, 293
RsaNI GTAC 4 cut(s) 13, 33, 89, 292
RseI CAYNNNNRTG 2 cut(s) 279, 576
SacI GAGCTC 1 cut(s) 1101
SaqAI TTAA 5 cut(s) 84, 138, 303, 528, 1308
SatI GCNGC 3 cut(s) 985, 1314, 1323
Sau3AI GATC 4 cut(s) 850, 1272, 1291, 1303
Sau96I GGNCC 5 cut(s) 343, 373, 457, 982, 1124
ScaI AGTACT 1 cut(s) 293
SchI GAGTC 2 cut(s) 134, 647
ScrFI CCNGG 1 cut(s) 1107
SduI GDGCHC 1 cut(s) 1101
SfaNI GCATC 3 cut(s) 60, 216, 1207
SfcI CTRYAG 1 cut(s) 1323
SinI GGWCC 3 cut(s) 343, 457, 1124
SmiMI CAYNNNNRTG 2 cut(s) 279, 576
SmlI CTYRAG 2 cut(s) 41, 83
SmoI CTYRAG 2 cut(s) 41, 83
Sse9I AATT 4 cut(s) 518, 698, 977, 1268
SsiI CCGC 1 cut(s) 985
SspMI CTAG 2 cut(s) 201, 1317
SstI GAGCTC 1 cut(s) 1101
StyD4I CCNGG 1 cut(s) 1105
StyI CCWWGG 3 cut(s) 334, 366, 1038
TaaI ACNGT 4 cut(s) 119, 575, 613, 1243
TaiI ACGT 4 cut(s) 412, 652, 746, 1032
TaqI TCGA 4 cut(s) 75, 412, 1113, 1146
TaqII GACCGA 1 cut(s) 512
TasI AATT 4 cut(s) 518, 698, 977, 1268
TatI WGTACW 1 cut(s) 291
TauI GCSGC 1 cut(s) 987
TfiI GAWTC 2 cut(s) 941, 1110
Tru1I TTAA 5 cut(s) 84, 138, 303, 528, 1308
Tru9I TTAA 5 cut(s) 84, 138, 303, 528, 1308
TscAI CASTG 2 cut(s) 567, 578
TseFI GTSAC 1 cut(s) 283
TseI GCWGC 2 cut(s) 1313, 1322
Tsp45I GTSAC 1 cut(s) 283
TspDTI ATGAA 6 cut(s) 21, 263, 638, 1005, 1039, 1189
TspGWI ACGGA 3 cut(s) 61, 264, 293
TspRI CASTG 2 cut(s) 567, 578
Vha464I CTTAAG 1 cut(s) 83
VpaK11BI GGWCC 3 cut(s) 343, 457, 1124
XapI RAATTY 1 cut(s) 518
XceI RCATGY 2 cut(s) 1000, 1264
XmnI GAANNNNTTC 1 cut(s) 161
XspI CTAG 2 cut(s) 201, 1317
ZrmI AGTACT 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.