Rh7AG381600

Guanosine nucleotide diphosphate dissociation inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0002570
Physical Location & Seq
Reverse (-)
49836761 .. 49838877
2117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG381600.1

Sequence Viewer

Length: 636 bp
ATGGAAGAGGGAGGTGGATGTTGGCGAATCCTCGGTCGTGTAATGGTCAGAGGGTGGTGGCGGCGGTTCTGTGTGGAAGTTTGTCATTGTTTGGATGACAAGCTGGTGCAGGAAATGCATCTGTTCTACTTTTATTTGAAAGAACAAAGGCTTCCTCCTCAGACATTCATACCTCTCCAATCTGTTCGTGTAAAGCAAGCAATGGAGAGATTGCATAACTTGGGTGGTACTGCAAAGCTGGTTTTTGATGTTCTACACATGGATAGGAATGACTATTACGGAGGAGAGTGTGCATCACTTAATCTTATTCAGCTCTGGAAGAGGTTCAGGGGAGATGATAAGCCCCCAGCCCAGTTGGGCTCTAGTAGGGATTATAATGTGGACATGGTCCCTAAGTTTTTGATGGCCAATGGAACTCTAGTGCGTGTCCTCATTCATACAGATGTTACCAAGTATTTGTCCTTCAAAGCTGTGGATGGTAGTTTTGTCTATAATAAAGGAAAGGTTCACAAGGTTCCAGCAAATGATATGGAGGCACTTAAATCTCCACTCATGGGTCTATTTGAAAAGCGCCGTGCCCGCAAGTTCTTCATAGAGATGATCGCTACCTGGATGAACCTGCACTGGATACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001558 GO:0003674 GO:0005092 GO:0005093 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0007275 GO:0007399 GO:0008150 GO:0008361 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010771 GO:0010975 GO:0010976 GO:0010977 GO:0016043 GO:0017016 GO:0017137 GO:0019899 GO:0022008 GO:0022603 GO:0022604 GO:0023052 GO:0030054 GO:0030154 GO:0030234 GO:0030307 GO:0030424 GO:0030516 GO:0030695 GO:0031267 GO:0031344 GO:0031345 GO:0031346 GO:0032386 GO:0032387 GO:0032482 GO:0032501 GO:0032502 GO:0032535 GO:0032879 GO:0032880 GO:0032991 GO:0033157 GO:0035556 GO:0036477 GO:0040008 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043209 GO:0044297 GO:0044424 GO:0044444 GO:0044464 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045666 GO:0045773 GO:0045927 GO:0048046 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050769 GO:0050770 GO:0050771 GO:0050772 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051051 GO:0051093 GO:0051094 GO:0051128 GO:0051129 GO:0051130 GO:0051223 GO:0051224 GO:0051239 GO:0051240 GO:0051241 GO:0051592 GO:0051716 GO:0051960 GO:0051961 GO:0051962 GO:0055044 GO:0060284 GO:0060341 GO:0060589 GO:0061387 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0071840 GO:0090066 GO:0090087 GO:0090313 GO:0090315 GO:0090317 GO:0097458 GO:0098772 GO:0120025 GO:0120035 GO:1903533 GO:1903827 GO:1903828 GO:1904950 GO:1905475 GO:1905476 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDI

Protein Analysis

211

Amino Acids

24.72

Weight (kDa)

9.4

Isoelectric Point (pI)

52.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDI PF00996 83 - 198 1.7e-60 GDP dissociation inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 375
Acc36I ACCTGC 1 cut(s) 627
AciI CCGC 3 cut(s) 61, 64, 580
AcoI YGGCCR 1 cut(s) 405
AfaI GTAC 1 cut(s) 229
AfiI CCNNNNNNNGG 1 cut(s) 554
AgsI TTSAA 3 cut(s) 139, 466, 566
AjnI CCWGG 1 cut(s) 608
AluBI AGCT 4 cut(s) 103, 238, 313, 470
AluI AGCT 4 cut(s) 103, 238, 313, 470
AoxI GGCC 1 cut(s) 405
ArsI GACNNNNNNTTYG 2 cut(s) 19, 51
Asp700I GAANNNNTTC 1 cut(s) 323
AspLEI GCGC 1 cut(s) 573
AspS9I GGNCC 1 cut(s) 388
AvaII GGWCC 1 cut(s) 388
BaeGI GKGCMC 1 cut(s) 580
BalI TGGCCA 1 cut(s) 407
BanII GRGCYC 1 cut(s) 362
BarI GAAGNNNNNNTAC 2 cut(s) 446, 478
BccI CCATC 2 cut(s) 397, 470
BceAI ACGGC 1 cut(s) 558
BciT130I CCWGG 1 cut(s) 610
BciVI GTATCC 1 cut(s) 621
BfaI CTAG 2 cut(s) 363, 419
BfoI RGCGCY 1 cut(s) 574
BfuAI ACCTGC 1 cut(s) 627
BfuI GTATCC 1 cut(s) 621
BisI GCNGC 1 cut(s) 62
BlsI GCNGC 1 cut(s) 63
Bme1390I CCNGG 1 cut(s) 610
Bme18I GGWCC 1 cut(s) 388
BmgT120I GGNCC 1 cut(s) 388
BmiI GGNNCC 2 cut(s) 390, 516
BmrFI CCNGG 1 cut(s) 610
BmrI ACTGGG 1 cut(s) 346
BmsI GCATC 2 cut(s) 127, 302
BmuI ACTGGG 1 cut(s) 346
BsaJI CCNNGG 1 cut(s) 31
Bsc4I CCNNNNNNNGG 1 cut(s) 554
Bse1I ACTGG 2 cut(s) 352, 629
Bse3DI GCAATG 1 cut(s) 207
BseBI CCWGG 1 cut(s) 610
BseDI CCNNGG 1 cut(s) 31
BseGI GGATG 4 cut(s) 23, 100, 481, 618
BseLI CCNNNNNNNGG 1 cut(s) 554
BseMI GCAATG 1 cut(s) 207
BseMII CTCAG 1 cut(s) 173
BseNI ACTGG 2 cut(s) 352, 629
BseRI GAGGAG 2 cut(s) 147, 297
BseSI GKGCMC 1 cut(s) 580
BseYI CCCAGC 1 cut(s) 346
BsgI GTGCAG 2 cut(s) 128, 605
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 1 cut(s) 407
BsiEI CGRYCG 1 cut(s) 37
BslFI GGGAC 1 cut(s) 374
BslI CCNNNNNNNGG 1 cut(s) 554
BsmFI GGGAC 1 cut(s) 374
BsnI GGCC 1 cut(s) 407
Bsp1286I GDGCHC 2 cut(s) 362, 580
Bsp143I GATC 1 cut(s) 600
BspACI CCGC 3 cut(s) 61, 64, 580
BspANI GGCC 1 cut(s) 407
BspCNI CTCAG 1 cut(s) 172
BspLI GGNNCC 2 cut(s) 390, 516
BspMI ACCTGC 1 cut(s) 627
BsrDI GCAATG 1 cut(s) 207
BsrI ACTGG 2 cut(s) 352, 629
BssECI CCNNGG 1 cut(s) 31
BssMI GATC 1 cut(s) 600
Bst2UI CCWGG 1 cut(s) 610
Bst4CI ACNGT 1 cut(s) 633
Bst6I CTCTTC 1 cut(s) 314
BstAPI GCANNNNNTGC 1 cut(s) 115
BstC8I GCNNGC 2 cut(s) 198, 580
BstDEI CTNAG 2 cut(s) 159, 393
BstF5I GGATG 4 cut(s) 23, 100, 481, 618
BstH2I RGCGCY 1 cut(s) 574
BstHHI GCGC 1 cut(s) 573
BstKTI GATC 1 cut(s) 603
BstMBI GATC 1 cut(s) 600
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 2 cut(s) 115, 579
BstNI CCWGG 1 cut(s) 610
BstSCI CCNGG 1 cut(s) 608
BstSLI GKGCMC 1 cut(s) 580
BsuI GTATCC 1 cut(s) 621
BsuRI GGCC 1 cut(s) 407
BtsCI GGATG 4 cut(s) 23, 100, 481, 618
BtsIMutI CAGTG 1 cut(s) 622
BveI ACCTGC 1 cut(s) 627
Cac8I GCNNGC 2 cut(s) 198, 580
CfoI GCGC 1 cut(s) 573
Cfr13I GGNCC 1 cut(s) 388
Csp6I GTAC 1 cut(s) 228
CviAII CATG 3 cut(s) 259, 385, 553
CviJI RGCY 9 cut(s) 103, 151, 238, 313, 343, 350, 360, 407, 470
CviKI_1 RGCY 9 cut(s) 103, 151, 238, 313, 343, 350, 360, 407, 470
CviQI GTAC 1 cut(s) 228
DdeI CTNAG 2 cut(s) 159, 393
DpnI GATC 1 cut(s) 602
DpnII GATC 1 cut(s) 600
EaeI YGGCCR 1 cut(s) 405
Eam1104I CTCTTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 314
Eco24I GRGCYC 1 cut(s) 362
Eco47I GGWCC 1 cut(s) 388
EcoRII CCWGG 1 cut(s) 608
EcoT22I ATGCAT 1 cut(s) 120
EcoT38I GRGCYC 1 cut(s) 362
FaeI CATG 3 cut(s) 262, 388, 556
FaqI GGGAC 1 cut(s) 374
FatI CATG 3 cut(s) 258, 384, 552
FauI CCCGC 1 cut(s) 587
Fnu4HI GCNGC 1 cut(s) 62
FokI GGATG 4 cut(s) 30, 107, 488, 625
FriOI GRGCYC 1 cut(s) 362
Fsp4HI GCNGC 1 cut(s) 62
FspBI CTAG 2 cut(s) 363, 419
GlaI GCGC 1 cut(s) 572
GluI GCNGC 1 cut(s) 62
GsaI CCCAGC 1 cut(s) 350
HaeII RGCGCY 1 cut(s) 574
HaeIII GGCC 1 cut(s) 407
HhaI GCGC 1 cut(s) 573
Hin1II CATG 3 cut(s) 262, 388, 556
Hin6I GCGC 1 cut(s) 571
HinP1I GCGC 1 cut(s) 571
HinfI GANTC 1 cut(s) 27
Hpy166II GTNNAC 2 cut(s) 382, 508
Hpy188I TCNGA 2 cut(s) 50, 162
Hpy188III TCNNGA 1 cut(s) 316
Hpy8I GTNNAC 2 cut(s) 382, 508
HpyAV CCTTC 1 cut(s) 472
HpyCH4III ACNGT 1 cut(s) 633
HpyCH4V TGCA 6 cut(s) 109, 118, 214, 233, 293, 622
HpyF10VI GCNNNNNNNGC 2 cut(s) 115, 579
HpyF3I CTNAG 2 cut(s) 159, 393
Hsp92II CATG 3 cut(s) 262, 388, 556
HspAI GCGC 1 cut(s) 571
Kzo9I GATC 1 cut(s) 600
LweI GCATC 2 cut(s) 127, 302
MaeI CTAG 2 cut(s) 363, 419
MaeIII GTNAC 1 cut(s) 445
MalI GATC 1 cut(s) 602
MboI GATC 1 cut(s) 600
MboII GAAGA 3 cut(s) 17, 331, 580
MhlI GDGCHC 2 cut(s) 362, 580
MlsI TGGCCA 1 cut(s) 407
MluNI TGGCCA 1 cut(s) 407
Mox20I TGGCCA 1 cut(s) 407
Mph1103I ATGCAT 1 cut(s) 120
MroXI GAANNNNTTC 1 cut(s) 323
MscI TGGCCA 1 cut(s) 407
MseI TTAA 2 cut(s) 300, 540
MslI CAYNNNNRTG 2 cut(s) 441, 596
Msp20I TGGCCA 1 cut(s) 407
MspR9I CCNGG 1 cut(s) 610
MvaI CCWGG 1 cut(s) 610
MwoI GCNNNNNNNGC 2 cut(s) 115, 579
NdeII GATC 1 cut(s) 600
NlaIII CATG 3 cut(s) 262, 388, 556
NlaIV GGNNCC 2 cut(s) 390, 516
NsiI ATGCAT 1 cut(s) 120
PdmI GAANNNNTTC 1 cut(s) 323
PfeI GAWTC 1 cut(s) 27
PflFI GACNNNGTC 1 cut(s) 386
PkrI GCNGC 1 cut(s) 63
PsiI TTATAA 1 cut(s) 375
Psp6I CCWGG 1 cut(s) 608
PspFI CCCAGC 1 cut(s) 346
PspGI CCWGG 1 cut(s) 608
PspN4I GGNNCC 2 cut(s) 390, 516
PspPI GGNCC 1 cut(s) 388
PsyI GACNNNGTC 1 cut(s) 386
RsaI GTAC 1 cut(s) 229
RsaNI GTAC 1 cut(s) 228
RseI CAYNNNNRTG 2 cut(s) 441, 596
SaqAI TTAA 2 cut(s) 300, 540
SatI GCNGC 1 cut(s) 62
Sau3AI GATC 1 cut(s) 600
Sau96I GGNCC 1 cut(s) 388
ScrFI CCNGG 1 cut(s) 610
SduI GDGCHC 2 cut(s) 362, 580
SfaNI GCATC 2 cut(s) 127, 302
SinI GGWCC 1 cut(s) 388
SmiMI CAYNNNNRTG 2 cut(s) 441, 596
SsiI CCGC 3 cut(s) 61, 64, 580
SspMI CTAG 2 cut(s) 363, 419
StyD4I CCNGG 1 cut(s) 608
TaaI ACNGT 1 cut(s) 633
TaqII GACCGA 1 cut(s) 23
TauI GCSGC 1 cut(s) 64
TfiI GAWTC 1 cut(s) 27
Tru1I TTAA 2 cut(s) 300, 540
Tru9I TTAA 2 cut(s) 300, 540
TscAI CASTG 1 cut(s) 629
TspDTI ATGAA 4 cut(s) 157, 425, 580, 629
TspGWI ACGGA 1 cut(s) 294
TspRI CASTG 1 cut(s) 629
Tth111I GACNNNGTC 1 cut(s) 386
VpaK11BI GGWCC 1 cut(s) 388
XmnI GAANNNNTTC 1 cut(s) 323
XspI CTAG 2 cut(s) 363, 419
Zsp2I ATGCAT 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.