Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8400599.1

Orthogroup ID

OG0015503

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 1247

Gene Structure 1246 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8400599.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1246 bp

atgccgtttctgtatgtgaaagttgtcaaagccaagagagcagatggtactaattcatcagcacctatttacgccaagcttgtgattggaacccatagcatcaaaacaaagagccaaagcgacaaggattgggaccaagtgtttgcgtttgataaggaagggttgaattcaacctctctggaagtgtctgtgtgggtggaagaggagatcaagaaggagggagaagcagctgccactcgtacggagacaagtctcggaatggtgtctttcgatttgcaggaggtgcccaagcgagtcccaccggacagtcctcttgctccccagtggtacactctcgactcagaaaagtctcagggaaatgatgtcatgctcgccgtctggatagggactcaggccgacgaagcattccaagaggcctggcagtcggattccggtgggttgatacccgagacccgggccaaggtttatttgtctccgaagctctggtatttgagagtaacggtcatccaaacccaagatctccagctaggttcgggatccgagcccaacaacaagaaggttcggaatccggaactttatgtgaaggctcactttggggcccaacttttgaaaacaagcaggactgccgtggggtccacgttgtgtagctcatccaatcccacttggaacgaggacctggtgtttgtagcagccgagccgtttgagccgtacatgactgtgaccgttgaggatgtgaccaatgggcaatcggtgggtcacaccaagttacacgtgccaagcgttgagaagagaacagacgatcgggctgagcccaagtccagatggttcaatttggtcggagatgaggcgcgtccttatgcgggtaggatacacctgcgggtttgtttggaagggggctatcacgtgctggacgaggcagctcacgtgaccagcgatgttagagctgcggcgaagcagctggccaaacctcccattggctcacttgaagttggtattcgcggcgccaccaatctgcttcccgtgaagatcaagaatggcatgcgtgggtcgaccgatacgtacgtggttgccaagtacgggccgaaatgggtccgaacccgcacaattctggatcggtttaatccgcggtggaacgagcaatacacatgggatgtatacgatccctgcactgttctcactatcggcgtcttcgataatggaaggtacaggcgcgatgaagcaggaaaacccgagaaagacattcgga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0001505 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006836 GO:0006887 GO:0007154 GO:0007267 GO:0007268 GO:0007269 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016043 GO:0016079 GO:0016082 GO:0016192 GO:0017075 GO:0017156 GO:0019905 GO:0022607 GO:0023051 GO:0023052 GO:0023061 GO:0030133 GO:0030424 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031410 GO:0031982 GO:0032879 GO:0032940 GO:0033267 GO:0034622 GO:0042995 GO:0043005 GO:0043195 GO:0043226 GO:0043227 GO:0043229 GO:0043679 GO:0043933 GO:0044085 GO:0044306 GO:0044422 GO:0044424 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044463 GO:0044464 GO:0045055 GO:0045202 GO:0046903 GO:0046907 GO:0046928 GO:0048489 GO:0048786 GO:0050789 GO:0050794 GO:0050804 GO:0051046 GO:0051049 GO:0051179 GO:0051234 GO:0051588 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0060341 GO:0065003 GO:0065007 GO:0065008 GO:0070382 GO:0071840 GO:0071944 GO:0097458 GO:0097479 GO:0097480 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098916 GO:0099003 GO:0099177 GO:0099501 GO:0099503 GO:0099504 GO:0099536 GO:0099537 GO:0099643 GO:0120025 GO:0120038 GO:0140029 GO:0150034 GO:1903530

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

415

Amino Acids

46.35

Weight (kDa)

6.69

Isoelectric Point (pI)

38.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03680
fragaria_vesca	FvH4_1g09453
malus_domestica	MD12G1012200.v1.1
prunus_persica	Prupe.7G016100_v2.0.a1
pyrus_communis	pycom12g00950
rosa_chinensis	RchiOBHm_Chr3g0495971
rosa_laevigata	RLG00000022574
rosa_multiflora	Rmu_co8400599.1_g000001 Rmu_sc0000334.1_g000055
rosa_roxburghii	Rroxscaffold_6G00389670
rosa_rugosa	Rorug03G0278600
rosa_samantha	Rh3AG325400 Rh3BG362000 Rh3CG358000 Rh3DG361300
rosa_wichuraiana	Rw3G028450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	882
Acc36I	ACCTGC	1 cut(s)	882
AccB1I	GGYRCC	2 cut(s)	283, 1001
AccI	GTMKAC	2 cut(s)	1049, 1155
AccII	CGCG	4 cut(s)	850, 999, 1126, 1212
AccIII	TCCGGA	1 cut(s)	568
AciI	CCGC	7 cut(s)	860, 877, 947, 999, 1099, 1124, 1126
AclWI	GGATC	4 cut(s)	531, 544, 1119, 1154
AcoI	YGGCCR	1 cut(s)	960
AcsI	RAATTY	1 cut(s)	166
AcvI	CACGTG	3 cut(s)	772, 904, 925
AcyI	GRCGYC	2 cut(s)	1002, 1185
AdeI	CACNNNGTG	1 cut(s)	642
AfaI	GTAC	7 cut(s)	49, 241, 329, 710, 1061, 1076, 1205
AfiI	CCNNNNNNNGG	5 cut(s)	453, 460, 860, 974, 1077
AflIII	ACRYGT	1 cut(s)	769
AgsI	TTSAA	5 cut(s)	166, 171, 610, 829, 986
AjnI	CCWGG	2 cut(s)	416, 675
AluBI	AGCT	8 cut(s)	79, 230, 481, 526, 648, 920, 944, 958
AluI	AGCT	8 cut(s)	79, 230, 481, 526, 648, 920, 944, 958
Alw26I	GTCTC	5 cut(s)	239, 257, 354, 443, 477
AlwI	GGATC	4 cut(s)	531, 544, 1119, 1154
Ama87I	CYCGRG	3 cut(s)	446, 453, 1229
Aor13HI	TCCGGA	1 cut(s)	568
AoxI	GGCC	6 cut(s)	393, 414, 456, 597, 960, 1079
ApaI	GGGCCC	1 cut(s)	601
ApeKI	GCWGC	6 cut(s)	227, 230, 689, 917, 944, 955
ApoI	RAATTY	1 cut(s)	166
ArsI	GACNNNNNNTTYG	4 cut(s)	125, 157, 665, 697
AspLEI	GCGC	3 cut(s)	850, 1004, 1212
AspS9I	GGNCC	8 cut(s)	133, 456, 597, 598, 633, 673, 1079, 1090
AsuC2I	CCSGG	2 cut(s)	454, 455
AvaI	CYCGRG	3 cut(s)	446, 453, 1229
AvaII	GGWCC	4 cut(s)	133, 633, 673, 1090
BaeGI	GKGCMC	2 cut(s)	288, 601
BaeI	ACNNNNGTAYC	2 cut(s)	1047, 1080
BalI	TGGCCA	1 cut(s)	962
BamHI	GGATCC	1 cut(s)	536
BanI	GGYRCC	2 cut(s)	283, 1001
BanII	GRGCYC	3 cut(s)	546, 601, 813
BbrPI	CACGTG	3 cut(s)	772, 904, 925
BbsI	GAAGAC	1 cut(s)	1180
BbvI	GCAGC	6 cut(s)	217, 239, 701, 929, 931, 967
BccI	CCATC	2 cut(s)	38, 816
BceAI	ACGGC	4 cut(s)	359, 611, 682, 691
BciT130I	CCWGG	2 cut(s)	418, 677
BciVI	GTATCC	1 cut(s)	861
BcnI	CCSGG	2 cut(s)	454, 455
BcoDI	GTCTC	5 cut(s)	239, 257, 354, 443, 477
BfaI	CTAG	1 cut(s)	527
BfoI	RGCGCY	1 cut(s)	1005
BfuAI	ACCTGC	1 cut(s)	882
BfuI	GTATCC	1 cut(s)	861
BglII	AGATCT	1 cut(s)	517
BisI	GCNGC	8 cut(s)	228, 231, 690, 918, 945, 948, 956, 1000
BlpI	GCTNAGC	1 cut(s)	807
BlsI	GCNGC	8 cut(s)	229, 232, 691, 919, 946, 949, 957, 1001
Bme1390I	CCNGG	4 cut(s)	418, 454, 455, 677
Bme18I	GGWCC	4 cut(s)	133, 633, 673, 1090
BmeT110I	CYCGRG	3 cut(s)	446, 453, 1229
BmgT120I	GGNCC	8 cut(s)	133, 456, 597, 598, 633, 673, 1079, 1090
BmiI	GGNNCC	9 cut(s)	91, 134, 285, 538, 598, 599, 634, 1003, 1091
BmrFI	CCNGG	4 cut(s)	418, 454, 455, 677
BmrI	ACTGGG	1 cut(s)	316
BmsI	GCATC	1 cut(s)	108
BmuI	ACTGGG	1 cut(s)	316
BpiI	GAAGAC	1 cut(s)	1180
BpmI	CTGGAG	1 cut(s)	506
Bpu1102I	GCTNAGC	1 cut(s)	807
BpuMI	CCSGG	2 cut(s)	454, 455
BsaAI	YACGTR	5 cut(s)	772, 904, 925, 1059, 1063
BsaHI	GRCGYC	2 cut(s)	1002, 1185
BsaI	GGTCTC	1 cut(s)	443
BsaJI	CCNNGG	4 cut(s)	453, 459, 627, 1124
BsaWI	WCCGGW	3 cut(s)	301, 431, 568
Bsc4I	CCNNNNNNNGG	5 cut(s)	453, 460, 860, 974, 1077
Bse1I	ACTGG	1 cut(s)	322
BseAI	TCCGGA	1 cut(s)	568
BseBI	CCWGG	2 cut(s)	418, 677
BseDI	CCNNGG	4 cut(s)	453, 459, 627, 1124
BseGI	GGATG	4 cut(s)	504, 650, 736, 1156
BseLI	CCNNNNNNNGG	5 cut(s)	453, 460, 860, 974, 1077
BseMII	CTCAG	4 cut(s)	354, 365, 404, 798
BseNI	ACTGG	1 cut(s)	322
BseRI	GAGGAG	1 cut(s)	218
BseSI	GKGCMC	2 cut(s)	288, 601
BseXI	GCAGC	6 cut(s)	217, 239, 701, 929, 931, 967
BsgI	GTGCAG	1 cut(s)	1150
Bsh1236I	CGCG	4 cut(s)	850, 999, 1126, 1212
Bsh1285I	CGRYCG	2 cut(s)	802, 1053
BshFI	GGCC	6 cut(s)	395, 416, 458, 599, 962, 1081
BshNI	GGYRCC	2 cut(s)	283, 1001
BsiEI	CGRYCG	2 cut(s)	802, 1053
BsiHKCI	CYCGRG	3 cut(s)	446, 453, 1229
BsiSI	CCGG	4 cut(s)	302, 432, 454, 569
BsiWI	CGTACG	2 cut(s)	239, 1059
BslFI	GGGAC	3 cut(s)	146, 281, 400
BslI	CCNNNNNNNGG	5 cut(s)	453, 460, 860, 974, 1077
BsmAI	GTCTC	5 cut(s)	239, 257, 354, 443, 477
BsmFI	GGGAC	3 cut(s)	146, 281, 400
BsmI	GAATGC	1 cut(s)	404
BsnI	GGCC	6 cut(s)	395, 416, 458, 599, 962, 1081
Bso31I	GGTCTC	1 cut(s)	443
BsoBI	CYCGRG	3 cut(s)	446, 453, 1229
Bsp120I	GGGCCC	1 cut(s)	597
Bsp1286I	GDGCHC	4 cut(s)	288, 546, 601, 813
Bsp13I	TCCGGA	1 cut(s)	568
Bsp143I	GATC	7 cut(s)	207, 517, 536, 799, 1026, 1111, 1159
Bsp1720I	GCTNAGC	1 cut(s)	807
BspACI	CCGC	7 cut(s)	860, 877, 947, 999, 1099, 1124, 1126
BspANI	GGCC	6 cut(s)	395, 416, 458, 599, 962, 1081
BspCNI	CTCAG	4 cut(s)	353, 364, 403, 799
BspEI	TCCGGA	1 cut(s)	568
BspFNI	CGCG	4 cut(s)	850, 999, 1126, 1212
BspLI	GGNNCC	9 cut(s)	91, 134, 285, 538, 598, 599, 634, 1003, 1091
BspMI	ACCTGC	1 cut(s)	882
BspPI	GGATC	4 cut(s)	531, 544, 1119, 1154
BspT107I	GGYRCC	2 cut(s)	283, 1001
BspTNI	GGTCTC	1 cut(s)	443
BsrI	ACTGG	1 cut(s)	322
BssECI	CCNNGG	4 cut(s)	453, 459, 627, 1124
BssMI	GATC	7 cut(s)	207, 517, 536, 799, 1026, 1111, 1159
BssNAI	GTATAC	1 cut(s)	1156
BssNI	GRCGYC	2 cut(s)	1002, 1185
BssT1I	CCWWGG	1 cut(s)	459
Bst1107I	GTATAC	1 cut(s)	1156
Bst2UI	CCWGG	2 cut(s)	418, 677
Bst4CI	ACNGT	5 cut(s)	308, 502, 718, 724, 1171
Bst6I	CTCTTC	2 cut(s)	195, 782
BstACI	GRCGYC	2 cut(s)	1002, 1185
BstAPI	GCANNNNNTGC	1 cut(s)	283
BstBAI	YACGTR	5 cut(s)	772, 904, 925, 1059, 1063
BstC8I	GCNNGC	3 cut(s)	372, 960, 1040
BstDEI	CTNAG	4 cut(s)	340, 351, 390, 807
BstDSI	CCRYGG	2 cut(s)	627, 1124
BstF5I	GGATG	4 cut(s)	504, 650, 736, 1156
BstFNI	CGCG	4 cut(s)	850, 999, 1126, 1212
BstH2I	RGCGCY	1 cut(s)	1005
BstHHI	GCGC	3 cut(s)	850, 1004, 1212
BstKTI	GATC	7 cut(s)	210, 520, 539, 802, 1029, 1114, 1162
BstMAI	GTCTC	5 cut(s)	239, 257, 354, 443, 477
BstMBI	GATC	7 cut(s)	207, 517, 536, 799, 1026, 1111, 1159
BstMCI	CGRYCG	2 cut(s)	802, 1053
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 283, 401, 703
BstNI	CCWGG	2 cut(s)	418, 677
BstNSI	RCATGY	1 cut(s)	1042
BstSCI	CCNGG	4 cut(s)	416, 452, 453, 675
BstSLI	GKGCMC	2 cut(s)	288, 601
BstSNI	TACGTA	1 cut(s)	1059
BstUI	CGCG	4 cut(s)	850, 999, 1126, 1212
BstV1I	GCAGC	6 cut(s)	217, 239, 701, 929, 931, 967
BstV2I	GAAGAC	1 cut(s)	1180
BstX2I	RGATCY	2 cut(s)	517, 536
BstYI	RGATCY	2 cut(s)	517, 536
BstZ17I	GTATAC	1 cut(s)	1156
BsuI	GTATCC	1 cut(s)	861
BsuRI	GGCC	6 cut(s)	395, 416, 458, 599, 962, 1081
BtgI	CCRYGG	2 cut(s)	627, 1124
BtgZI	GCGATG	2 cut(s)	948, 1227
BtsCI	GGATG	4 cut(s)	504, 650, 736, 1156
BtsIMutI	CAGTG	2 cut(s)	329, 1167
BveI	ACCTGC	1 cut(s)	882
Cac8I	GCNNGC	3 cut(s)	372, 960, 1040
CfoI	GCGC	3 cut(s)	850, 1004, 1212
Cfr13I	GGNCC	8 cut(s)	133, 456, 597, 598, 633, 673, 1079, 1090
Cfr42I	CCGCGG	1 cut(s)	1127
Cfr9I	CCCGGG	1 cut(s)	453
CseI	GACGC	2 cut(s)	839, 1174
CsiI	ACCWGGT	1 cut(s)	675
Csp6I	GTAC	7 cut(s)	48, 240, 328, 709, 1060, 1075, 1204
CviAII	CATG	4 cut(s)	367, 712, 1039, 1146
CviQI	GTAC	7 cut(s)	48, 240, 328, 709, 1060, 1075, 1204
DdeI	CTNAG	4 cut(s)	340, 351, 390, 807
DinI	GGCGCC	1 cut(s)	1003
DpnI	GATC	7 cut(s)	209, 519, 538, 801, 1028, 1113, 1161
DpnII	GATC	7 cut(s)	207, 517, 536, 799, 1026, 1111, 1159
DraIII	CACNNNGTG	1 cut(s)	642
EaeI	YGGCCR	1 cut(s)	960
Eam1104I	CTCTTC	2 cut(s)	195, 782
EarI	CTCTTC	2 cut(s)	195, 782
Eco105I	TACGTA	1 cut(s)	1059
Eco130I	CCWWGG	1 cut(s)	459
Eco147I	AGGCCT	1 cut(s)	416
Eco24I	GRGCYC	3 cut(s)	546, 601, 813
Eco31I	GGTCTC	1 cut(s)	443
Eco47I	GGWCC	4 cut(s)	133, 633, 673, 1090
Eco72I	CACGTG	3 cut(s)	772, 904, 925
Eco88I	CYCGRG	3 cut(s)	446, 453, 1229
EcoO109I	RGGNCCY	2 cut(s)	597, 673
EcoRI	GAATTC	1 cut(s)	166
EcoRII	CCWGG	2 cut(s)	416, 675
EcoT14I	CCWWGG	1 cut(s)	459
EcoT38I	GRGCYC	3 cut(s)	546, 601, 813
EgeI	GGCGCC	1 cut(s)	1003
EheI	GGCGCC	1 cut(s)	1003
ErhI	CCWWGG	1 cut(s)	459
FaeI	CATG	4 cut(s)	370, 715, 1042, 1149
FaiI	YATR	9 cut(s)	15, 96, 368, 579, 713, 858, 1040, 1147, 1156
FalI	AAGNNNNNCTT	2 cut(s)	575, 607
FaqI	GGGAC	3 cut(s)	146, 281, 400
FatI	CATG	4 cut(s)	366, 711, 1038, 1145
FauI	CCCGC	3 cut(s)	853, 870, 1106
FblI	GTMKAC	2 cut(s)	1049, 1155
Fnu4HI	GCNGC	8 cut(s)	228, 231, 690, 918, 945, 948, 956, 1000
FokI	GGATG	4 cut(s)	491, 637, 743, 1163
FriOI	GRGCYC	3 cut(s)	546, 601, 813
Fsp4HI	GCNGC	8 cut(s)	228, 231, 690, 918, 945, 948, 956, 1000
FspBI	CTAG	1 cut(s)	527
GlaI	GCGC	3 cut(s)	849, 1003, 1211
GluI	GCNGC	8 cut(s)	228, 231, 690, 918, 945, 948, 956, 1000
GsuI	CTGGAG	1 cut(s)	506
HaeII	RGCGCY	1 cut(s)	1005
HaeIII	GGCC	6 cut(s)	395, 416, 458, 599, 962, 1081
HapII	CCGG	4 cut(s)	302, 432, 454, 569
HgaI	GACGC	2 cut(s)	839, 1174
HhaI	GCGC	3 cut(s)	850, 1004, 1212
Hin1I	GRCGYC	2 cut(s)	1002, 1185
Hin1II	CATG	4 cut(s)	370, 715, 1042, 1149
Hin6I	GCGC	3 cut(s)	848, 1002, 1210
HinP1I	GCGC	3 cut(s)	848, 1002, 1210
HincII	GTYRAC	1 cut(s)	1050
HindII	GTYRAC	1 cut(s)	1050
HindIII	AAGCTT	1 cut(s)	77
HinfI	GANTC	5 cut(s)	294, 338, 388, 428, 565
HpaII	CCGG	4 cut(s)	302, 432, 454, 569
Hpy166II	GTNNAC	4 cut(s)	330, 636, 1050, 1156
Hpy188I	TCNGA	9 cut(s)	257, 343, 427, 477, 541, 564, 839, 1094, 1245
Hpy188III	TCNNGA	9 cut(s)	179, 211, 335, 379, 534, 569, 819, 1030, 1109
Hpy8I	GTNNAC	4 cut(s)	330, 636, 1050, 1156
Hpy99I	CGWCG	1 cut(s)	401
HpyAV	CCTTC	6 cut(s)	152, 208, 550, 577, 884, 1194
HpyCH4III	ACNGT	5 cut(s)	308, 502, 718, 724, 1171
HpyCH4IV	ACGT	6 cut(s)	638, 771, 903, 924, 1058, 1062
HpyCH4V	TGCA	2 cut(s)	277, 1167
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 283, 401, 703
HpyF3I	CTNAG	4 cut(s)	340, 351, 390, 807
HpySE526I	ACGT	6 cut(s)	638, 771, 903, 924, 1058, 1062
Hsp92I	GRCGYC	2 cut(s)	1002, 1185
Hsp92II	CATG	4 cut(s)	370, 715, 1042, 1149
HspAI	GCGC	3 cut(s)	848, 1002, 1210
KasI	GGCGCC	1 cut(s)	1001
Kpn2I	TCCGGA	1 cut(s)	568
KspI	CCGCGG	1 cut(s)	1127
Kzo9I	GATC	7 cut(s)	207, 517, 536, 799, 1026, 1111, 1159
LmnI	GCTCC	1 cut(s)	322
Lsp1109I	GCAGC	6 cut(s)	217, 239, 701, 929, 931, 967
LweI	GCATC	1 cut(s)	108
MabI	ACCWGGT	1 cut(s)	675
MaeI	CTAG	1 cut(s)	527
MaeII	ACGT	6 cut(s)	638, 771, 903, 924, 1058, 1062
MaeIII	GTNAC	6 cut(s)	496, 718, 733, 755, 765, 925
MalI	GATC	7 cut(s)	209, 519, 538, 801, 1028, 1113, 1161
MboI	GATC	7 cut(s)	207, 517, 536, 799, 1026, 1111, 1159
MboII	GAAGA	4 cut(s)	212, 799, 1036, 1180
MflI	RGATCY	2 cut(s)	517, 536
MhlI	GDGCHC	4 cut(s)	288, 546, 601, 813
MlsI	TGGCCA	1 cut(s)	962
MluCI	AATT	4 cut(s)	52, 166, 829, 1104
MluNI	TGGCCA	1 cut(s)	962
Mly113I	GGCGCC	1 cut(s)	1002
MlyI	GAGTC	3 cut(s)	303, 332, 382
MmeI	TCCRAC	2 cut(s)	405, 817
Mox20I	TGGCCA	1 cut(s)	962
MroI	TCCGGA	1 cut(s)	568
MscI	TGGCCA	1 cut(s)	962
MseI	TTAA	1 cut(s)	1119
MslI	CAYNNNNRTG	1 cut(s)	716
Msp20I	TGGCCA	1 cut(s)	962
MspA1I	CMGCKG	3 cut(s)	230, 958, 1126
MspI	CCGG	4 cut(s)	302, 432, 454, 569
MspR9I	CCNGG	4 cut(s)	418, 454, 455, 677
Mva1269I	GAATGC	1 cut(s)	404
MvaI	CCWGG	2 cut(s)	418, 677
MvnI	CGCG	4 cut(s)	850, 999, 1126, 1212
MwoI	GCNNNNNNNGC	4 cut(s)	38, 283, 401, 703
NarI	GGCGCC	1 cut(s)	1002
NciI	CCSGG	2 cut(s)	454, 455
NdeII	GATC	7 cut(s)	207, 517, 536, 799, 1026, 1111, 1159
NlaIII	CATG	4 cut(s)	370, 715, 1042, 1149
NlaIV	GGNNCC	9 cut(s)	91, 134, 285, 538, 598, 599, 634, 1003, 1091
NmeAIII	GCCGAG	1 cut(s)	718
NmuCI	GTSAC	4 cut(s)	718, 733, 755, 925
NspI	RCATGY	1 cut(s)	1042
PaeI	GCATGC	1 cut(s)	1042
PaqCI	CACCTGC	1 cut(s)	882
PceI	AGGCCT	1 cut(s)	416
PcsI	WCGNNNNNNNCGW	5 cut(s)	777, 909, 930, 1055, 1188
PctI	GAATGC	1 cut(s)	404
PfeI	GAWTC	2 cut(s)	428, 565
Pfl23II	CGTACG	2 cut(s)	239, 1059
PkrI	GCNGC	8 cut(s)	229, 232, 691, 919, 946, 949, 957, 1001
Ple19I	CGATCG	1 cut(s)	802
PleI	GAGTC	3 cut(s)	302, 332, 382
PluTI	GGCGCC	1 cut(s)	1005
PmaCI	CACGTG	3 cut(s)	772, 904, 925
PmlI	CACGTG	3 cut(s)	772, 904, 925
PpsI	GAGTC	3 cut(s)	302, 332, 382
Ppu21I	YACGTR	5 cut(s)	772, 904, 925, 1059, 1063
PpuMI	RGGWCCY	1 cut(s)	673
Psp5II	RGGWCCY	1 cut(s)	673
Psp6I	CCWGG	2 cut(s)	416, 675
PspCI	CACGTG	3 cut(s)	772, 904, 925
PspGI	CCWGG	2 cut(s)	416, 675
PspLI	CGTACG	2 cut(s)	239, 1059
PspN4I	GGNNCC	9 cut(s)	91, 134, 285, 538, 598, 599, 634, 1003, 1091
PspOMI	GGGCCC	1 cut(s)	597
PspPI	GGNCC	8 cut(s)	133, 456, 597, 598, 633, 673, 1079, 1090
PspPPI	RGGWCCY	1 cut(s)	673
PsrI	GAACNNNNNNTAC	2 cut(s)	1124, 1156
PsuI	RGATCY	2 cut(s)	517, 536
PvuI	CGATCG	1 cut(s)	802
PvuII	CAGCTG	2 cut(s)	230, 958
RsaI	GTAC	7 cut(s)	49, 241, 329, 710, 1061, 1076, 1205
RsaNI	GTAC	7 cut(s)	48, 240, 328, 709, 1060, 1075, 1204
RseI	CAYNNNNRTG	1 cut(s)	716
SacII	CCGCGG	1 cut(s)	1127
SalI	GTCGAC	1 cut(s)	1048
SaqAI	TTAA	1 cut(s)	1119
SatI	GCNGC	8 cut(s)	228, 231, 690, 918, 945, 948, 956, 1000
Sau3AI	GATC	7 cut(s)	207, 517, 536, 799, 1026, 1111, 1159
Sau96I	GGNCC	8 cut(s)	133, 456, 597, 598, 633, 673, 1079, 1090
SchI	GAGTC	3 cut(s)	303, 332, 382
ScrFI	CCNGG	4 cut(s)	418, 454, 455, 677
SduI	GDGCHC	4 cut(s)	288, 546, 601, 813
SexAI	ACCWGGT	1 cut(s)	675
SfaNI	GCATC	1 cut(s)	108
SfoI	GGCGCC	1 cut(s)	1003
Sfr303I	CCGCGG	1 cut(s)	1127
SgrBI	CCGCGG	1 cut(s)	1127
SinI	GGWCC	4 cut(s)	133, 633, 673, 1090
SmaI	CCCGGG	1 cut(s)	455
SmiMI	CAYNNNNRTG	1 cut(s)	716
SnaBI	TACGTA	1 cut(s)	1059
SphI	GCATGC	1 cut(s)	1042
Sse9I	AATT	4 cut(s)	52, 166, 829, 1104
SseBI	AGGCCT	1 cut(s)	416
SsiI	CCGC	7 cut(s)	860, 877, 947, 999, 1099, 1124, 1126
SspDI	GGCGCC	1 cut(s)	1001
SspMI	CTAG	1 cut(s)	527
StuI	AGGCCT	1 cut(s)	416
StyD4I	CCNGG	4 cut(s)	416, 452, 453, 675
StyI	CCWWGG	1 cut(s)	459
TaaI	ACNGT	5 cut(s)	308, 502, 718, 724, 1171
TaiI	ACGT	6 cut(s)	641, 774, 906, 927, 1061, 1065
TaqI	TCGA	4 cut(s)	270, 336, 1049, 1191
TaqII	GACCGA	1 cut(s)	1067
TasI	AATT	4 cut(s)	52, 166, 829, 1104
TauI	GCSGC	2 cut(s)	950, 1002
TfiI	GAWTC	2 cut(s)	428, 565
Tru1I	TTAA	1 cut(s)	1119
Tru9I	TTAA	1 cut(s)	1119
TscAI	CASTG	2 cut(s)	329, 1174
TseFI	GTSAC	4 cut(s)	718, 733, 755, 925
TseI	GCWGC	6 cut(s)	227, 230, 689, 917, 944, 955
Tsp45I	GTSAC	4 cut(s)	718, 733, 755, 925
TspDTI	ATGAA	2 cut(s)	45, 1230
TspGWI	ACGGA	1 cut(s)	257
TspMI	CCCGGG	1 cut(s)	453
TspRI	CASTG	2 cut(s)	329, 1174
VpaK11BI	GGWCC	4 cut(s)	133, 633, 673, 1090
XapI	RAATTY	1 cut(s)	166
XceI	RCATGY	1 cut(s)	1042
XmaI	CCCGGG	1 cut(s)	453
XmiI	GTMKAC	2 cut(s)	1049, 1155
XspI	CTAG	1 cut(s)	527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.