Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0015503

Physical Location & Seq

Genomic Coordinates Reverse (-)

4121484 .. 4124519

Gene Structure 3036 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022574

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3036 bp

ATGGCAGAAACCTCTGGTCGTAAGCTGATCGTCGAAGTCTGCAACGCCAAGAATTTAATGCCCAAAGACGGTCAAGGAACGGCGAGTGCCTATGCCATCGTAGATTTCGACGGGCAGAGACGGCGAACAAAGACCAAACAGAGAGATCTCAACCCCGAATGGGACGAAAAGCTCGAGTTTCTAGTCCATGACAATTTGTCCATGGGCTCCGAGATATTAGAAATCAATATCTACAACGATAAGAAGAGTGGGAAAAGAAGTACTTTTCTTGGCAAAGTCAAGATCCCAGGCTCTACCTTTGTGAAAGCAGAGCCGGAGAACACACTCGTTTACTTCCCCTTGGAGAAACGGAGCGTGTTTTCTCAGATCAAAGGCGAGTTGGGATTGAAGATTTACTATATCGATGAAGACCCACCAGCAGCAGCGGCGGCGGCGGCGGCGGAAGACCAGAAACCTGCAGCGGAGGATAAGCCGCCGGAGAAGCCAAAGGAAGAGGAAAACAAGCAAGAAGCAGCTAAACCTCCAGAGGAGAAGCCGAAAGAGGAGCAGGAGAACAAACAAGAAGAGAAACCGAAAGACGAGTCTAACAAACCTGAAGACAAGCCCACGGCACCGGAAAATACCCCAAAAACAGCGGAGGCTTCTTCAGCTGTTGCTGCTCCCCCGCCAGAGGTAGAAAATCCACCGTTTGCTTACAGTGAGAAGCAAAATCAAGACAAAGAGATGCATGTAGAGAGGAAGGATTTGGGCATCAACGAGATGGAGCTCCAACCTTTAGCCCGGGACCGAAGTCGGAGGGCGTACGATCTTGTTGATCGGATGCCGTTTCTTTATGTGAAAGTTGTCAAAGCCAAGAGAGCAGATGGTACTAATTCATCAGCACCTATTTACGCCAAGCTTGTGATTGGAACTCATAGCATCAAAACAAAGAGCCAAAGCGACAAGGATTGGGACCAAGTGTTTGCGTTTGATAAGGAAGGGTTGAATTCGACCTCTCTGGAAGTGTCTGTGTGGGTGGAAGAGGAGATCAAGAAGGAGGGAGAAGCAGCTGCCACTCGTACGGAGACTAGTCTCGGAATGGTGTCTTTCGATTTGCAGGAGGTGCCCAAGCGTGTCCCACCGGACAGTCCTCTTGCTCCCCAGTGGTACACTCTCGACTCAGAAAAGTCACCGGTAAATGATGTCATGCTCGCCGTCTGGATAGGGACTCAGGCAGACGAAGCATTCCAAGAGGCCTGGCAGTCGGATTCCGGTGGGTTGATACCCGAGACCCGGGCTAAGGTTTATTTGTCTCCGAAGCTCTGGTATTTGAGAGTAACGGTCATCCAAACCCAAGATCTCCAGCTAGGTTCGGGATCCGAGCCCAACAACAAGAAGGTTCGGAATCCGGAACTTTATGTGAAGGCTCACTTTGGGGCCCAACTTTTCAAAACGAGTAGGACCTCCATGGGGTCCACGTTGTGCAGCTCATCCAATCCCACTTGGAACGAGGACTTGGTGTTTGTAGCAGCCGAGCCGTTTGAGCCGTACATGACTGTGACCGTTGAAGATGTGACCAATGGGCAATCGGTGGGGCACACCAAGTTACACGTGCCAAGCGTTGAGAAGAGAACAGACGATCGGGCTGAGCCCAAGTCCAGGTGGTTCAATTTGGTTGGAGATGAGGCGCGTCCTTATGCGGGTAGGATACACCTGCGGGTTTGTTTGGAAGGTGGGTATCACGTGCTGGACGAGGCAGCTCACGTGACCAGCGATGTTCGACCCGCGGCAAAGCAGCTGGCCAAACCTCCCATTGGCTCACTTGAAGTTGGTATTCGCGGCGCCACCAATCTGCTTCCGGTGAAGATCAAGAATGGCATGCGTGGGTCGACCGATACGTACGTGGTTGCCAAGTACGGGCCGAAATGGGTCCGAACCCGTACAATTCTGGATCGGTTTAATCCGCGGTGGAACGAGCAATACACTTGGGATGTATACGACCCCTGCACTGTTCTCACTATCGGCGTCTTCGATAATGGAAGGTACAGGCGCGATGAAGCGGGAAAACCCGAGAAAGACATTCGGATCGGAAAGATACGGGTACGGTTATCCACTCTTGATACGAATCGGGTTTACAAGAATTCGTACTCTCTTACAGTGCTGCTCCCCGGTGGGGCTAAGAAAATGGGTGAGATAGAGATAGCCGTCCGATTTTCATGCTCGTCGTGGCTGACTCTGGTACAAGCCTACAGCACCCCAATGCTTCCGAGAATGCATTACGTGCGCCCAATGGGTCCGGCCCAACAAGACATTCTGCGGCACACGGCTATGCGCGTAGTGACCGCCCGGCTGGCAAGGTCGGAGCCACCGCTGGGTCAGGAAGTTGTTCAGTTCATGCTGGACTCCGATACGCATGTGTGGAGCATGAGGAGAAGCAAGGCCAACTGGTTTCGCGTGGTGGGATGTCTGTCACGCGTGGCGACACTGGCGCGGTGGCTGGATGGAATTCGCACGTGGCTGCATCCGCCCACCACTGTTTTAATGCACGTGATCCTGGTGGCTGTGGTTTTGTGCCCGCATTTGATATTTCCGACACTGTTCATGTACGCCTTCTTGATCTTACTGCTGAGATCGCGGTATCGTCTAAGAGTGCCGGCCAACATGGACCCTCGGATCTCATATGTTGATGCGGTGAGCCCGGATGAGTTGGATGAAGAGCTTGATGGGTTCCCCTCTACACGACCCACGGATGTAGTTCGAATCCGATACGATCGATTGCGGGCCCTTGGTGGGCGGGCTCAAACTTTGTTGGGTGACGTGGCAGCCCAAGGAGAGCGTTTGGAGGCCCTGTTCAGTTGGAGGGACCCAAGGCCAACCGGAATATTTGTTGTCTTCTGTCTGGTGGCGTCTTTGGTGTTTTACGTGCTGCCATTCAAGGCTTTTGTGTTGGGGTCAGGGTTCTATTACCTGCGCCATCCTAGGTTCCGTGACGATATGCCGTCAGTTTCCACCAACTTTTTCCGGCGACTTCCATCCTTGTCTGACCAGATCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0001505 GO:0003674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006836 GO:0006887 GO:0007154 GO:0007267 GO:0007268 GO:0007269 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016043 GO:0016079 GO:0016082 GO:0016192 GO:0017075 GO:0017156 GO:0019905 GO:0022607 GO:0023051 GO:0023052 GO:0023061 GO:0030133 GO:0030424 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031410 GO:0031982 GO:0032879 GO:0032940 GO:0033267 GO:0034622 GO:0042995 GO:0043005 GO:0043195 GO:0043226 GO:0043227 GO:0043229 GO:0043679 GO:0043933 GO:0044085 GO:0044306 GO:0044422 GO:0044424 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044463 GO:0044464 GO:0045055 GO:0045202 GO:0046903 GO:0046907 GO:0046928 GO:0048489 GO:0048786 GO:0050789 GO:0050794 GO:0050804 GO:0051046 GO:0051049 GO:0051179 GO:0051234 GO:0051588 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0060341 GO:0065003 GO:0065007 GO:0065008 GO:0070382 GO:0071840 GO:0071944 GO:0097458 GO:0097479 GO:0097480 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098916 GO:0099003 GO:0099177 GO:0099501 GO:0099503 GO:0099504 GO:0099536 GO:0099537 GO:0099643 GO:0120025 GO:0120038 GO:0140029 GO:0150034 GO:1903530

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1012

Amino Acids

114.14

Weight (kDa)

8.28

Isoelectric Point (pI)

49.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	8 - 106	2.4e-19	C2 domain
C2	PF00168	435 - 550	2.9e-08	C2 domain
C2	PF00168	599 - 711	2.1e-18	C2 domain
PRT_C	PF08372	857 - 1011	3.5e-68	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03680
fragaria_vesca	FvH4_1g09453
malus_domestica	MD12G1012200.v1.1
prunus_persica	Prupe.7G016100_v2.0.a1
pyrus_communis	pycom12g00950
rosa_chinensis	RchiOBHm_Chr3g0495971
rosa_laevigata	RLG00000022574
rosa_multiflora	Rmu_co8400599.1_g000001 Rmu_sc0000334.1_g000055
rosa_roxburghii	Rroxscaffold_6G00389670
rosa_rugosa	Rorug03G0278600
rosa_samantha	Rh3AG325400 Rh3BG362000 Rh3CG358000 Rh3DG361300
rosa_wichuraiana	Rw3G028450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1701
Acc36I	ACCTGC	3 cut(s)	463, 1701, 2955
AccB1I	GGYRCC	3 cut(s)	610, 1102, 1820
AccI	GTMKAC	2 cut(s)	1868, 1974
AccIII	TCCGGA	1 cut(s)	1387
AclWI	GGATC	7 cut(s)	277, 1350, 1363, 1938, 2072, 2524, 2660
AcoI	YGGCCR	2 cut(s)	1779, 2634
AcsI	RAATTY	4 cut(s)	52, 985, 2119, 2484
AcuI	CTGAAG	2 cut(s)	615, 630
AcvI	CACGTG	5 cut(s)	1591, 1723, 1744, 2493, 2527
AcyI	GRCGYC	3 cut(s)	1821, 2004, 2885
AdeI	CACNNNGTG	1 cut(s)	1461
AflIII	ACRYGT	2 cut(s)	1588, 2452
AgeI	ACCGGT	1 cut(s)	1171
AgsI	TTSAA	7 cut(s)	388, 985, 1429, 1547, 1648, 1805, 2914
AhdI	GACNNNNNGTC	1 cut(s)	196
AhlI	ACTAGT	1 cut(s)	1067
AjiI	CACGTC	1 cut(s)	2797
AjnI	CCWGG	4 cut(s)	286, 1235, 1637, 2532
AjuI	GAANNNNNNNTTGG	4 cut(s)	1478, 1510, 2274, 2306
AloI	GAACNNNNNNTCC	2 cut(s)	2813, 2845
Alw21I	GWGCWC	1 cut(s)	768
Alw26I	GTCTC	5 cut(s)	112, 1058, 1076, 1262, 1296
AlwI	GGATC	7 cut(s)	277, 1350, 1363, 1938, 2072, 2524, 2660
Ama87I	CYCGRG	5 cut(s)	173, 780, 1265, 1272, 2048
Aor13HI	TCCGGA	1 cut(s)	1387
ApaI	GGGCCC	2 cut(s)	1420, 2764
ApoI	RAATTY	4 cut(s)	52, 985, 2119, 2484
ArsI	GACNNNNNNTTYG	6 cut(s)	566, 598, 944, 976, 1484, 1516
AsiGI	ACCGGT	1 cut(s)	1171
Asp700I	GAANNNNTTC	1 cut(s)	2364
AspA2I	CCTAGG	1 cut(s)	2957
AspLEI	GCGC	7 cut(s)	1669, 1823, 2031, 2265, 2313, 2470, 2952
AsuC2I	CCSGG	7 cut(s)	781, 782, 1273, 1274, 2148, 2326, 2678
AsuHPI	GGTGA	5 cut(s)	1161, 1852, 2180, 2683, 2804
AsuII	TTCGAA	1 cut(s)	2737
AvaI	CYCGRG	5 cut(s)	173, 780, 1265, 1272, 2048
AvaII	GGWCC	8 cut(s)	784, 952, 1440, 1452, 1909, 2273, 2644, 2842
AvrII	CCTAGG	1 cut(s)	2957
BaeGI	GKGCMC	5 cut(s)	1107, 1420, 1578, 2555, 2764
BaeI	ACNNNNGTAYC	4 cut(s)	1866, 1899, 2379, 2412
BalI	TGGCCA	1 cut(s)	1781
BamHI	GGATCC	1 cut(s)	1355
BanI	GGYRCC	3 cut(s)	610, 1102, 1820
BanII	GRGCYC	8 cut(s)	209, 768, 1365, 1420, 1632, 2678, 2764, 2779
BbrPI	CACGTG	5 cut(s)	1591, 1723, 1744, 2493, 2527
BbsI	GAAGAC	5 cut(s)	414, 450, 603, 1999, 2863
Bbv12I	GWGCWC	1 cut(s)	768
BccI	CCATC	7 cut(s)	104, 754, 857, 2474, 2696, 2961, 3019
BcgI	CGANNNNNNTGC	2 cut(s)	2178, 2212
BciT130I	CCWGG	4 cut(s)	288, 1237, 1639, 2534
BciVI	GTATCC	1 cut(s)	1680
BcnI	CCSGG	7 cut(s)	781, 782, 1273, 1274, 2148, 2326, 2678
BcoDI	GTCTC	5 cut(s)	112, 1058, 1076, 1262, 1296
BcuI	ACTAGT	1 cut(s)	1067
BfaI	CTAG	4 cut(s)	182, 1068, 1346, 2958
BfmI	CTRYAG	2 cut(s)	456, 2227
BfoI	RGCGCY	1 cut(s)	1824
BfuAI	ACCTGC	3 cut(s)	463, 1701, 2955
BfuI	GTATCC	1 cut(s)	1680
BglI	GCCNNNNNGGC	1 cut(s)	2330
BglII	AGATCT	2 cut(s)	145, 1336
BlnI	CCTAGG	1 cut(s)	2957
BlpI	GCTNAGC	1 cut(s)	1626
BmcAI	AGTACT	1 cut(s)	262
Bme18I	GGWCC	8 cut(s)	784, 952, 1440, 1452, 1909, 2273, 2644, 2842
BmeRI	GACNNNNNGTC	1 cut(s)	196
BmeT110I	CYCGRG	5 cut(s)	173, 780, 1265, 1272, 2048
BmgBI	CACGTC	1 cut(s)	2797
BmrI	ACTGGG	1 cut(s)	1135
BmsI	GCATC	6 cut(s)	714, 759, 810, 927, 2509, 2656
BmuI	ACTGGG	1 cut(s)	1135
BoxI	GACNNNNGTC	1 cut(s)	789
BpiI	GAAGAC	5 cut(s)	414, 450, 603, 1999, 2863
BpmI	CTGGAG	2 cut(s)	507, 1325
Bpu10I	CCTNAGC	1 cut(s)	1278
Bpu1102I	GCTNAGC	1 cut(s)	1626
Bpu14I	TTCGAA	1 cut(s)	2737
BpuMI	CCSGG	7 cut(s)	781, 782, 1273, 1274, 2148, 2326, 2678
Bsa29I	ATCGAT	2 cut(s)	402, 2752
BsaAI	YACGTR	9 cut(s)	1591, 1723, 1744, 1878, 1882, 2260, 2493, 2527, 2902
BsaBI	GATNNNNATC	1 cut(s)	2103
BsaHI	GRCGYC	3 cut(s)	1821, 2004, 2885
BsaI	GGTCTC	1 cut(s)	1262
BsaWI	WCCGGW	7 cut(s)	613, 1120, 1171, 1250, 1387, 1837, 2855
BsaXI	ACNNNNNCTCC	2 cut(s)	2813, 2843
Bse118I	RCCGGY	2 cut(s)	1171, 2632
Bse1I	ACTGG	3 cut(s)	1141, 2429, 2469
Bse8I	GATNNNNATC	1 cut(s)	2103
BseAI	TCCGGA	1 cut(s)	1387
BseBI	CCWGG	4 cut(s)	288, 1237, 1639, 2534
BseCI	ATCGAT	2 cut(s)	402, 2752
BseJI	GATNNNNATC	1 cut(s)	2103
BseMII	CTCAG	5 cut(s)	377, 1173, 1223, 1617, 2597
BseNI	ACTGG	3 cut(s)	1141, 2429, 2469
BseRI	GAGGAG	4 cut(s)	542, 557, 1037, 2422
BseSI	GKGCMC	5 cut(s)	1107, 1420, 1578, 2555, 2764
BseYI	CCCAGC	1 cut(s)	2350
BsgI	GTGCAG	2 cut(s)	1483, 1969
Bsh1285I	CGRYCG	3 cut(s)	1621, 1872, 2752
BshNI	GGYRCC	3 cut(s)	610, 1102, 1820
BshTI	ACCGGT	1 cut(s)	1171
BshVI	ATCGAT	2 cut(s)	402, 2752
BsiEI	CGRYCG	3 cut(s)	1621, 1872, 2752
BsiHKAI	GWGCWC	1 cut(s)	768
BsiHKCI	CYCGRG	5 cut(s)	173, 780, 1265, 1272, 2048
BsiWI	CGTACG	3 cut(s)	801, 1058, 1878
BslFI	GGGAC	6 cut(s)	176, 797, 965, 1100, 1219, 2855
BsmAI	GTCTC	5 cut(s)	112, 1058, 1076, 1262, 1296
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	6 cut(s)	176, 797, 965, 1100, 1219, 2855
BsmI	GAATGC	2 cut(s)	1223, 2256
Bso31I	GGTCTC	1 cut(s)	1262
BsoBI	CYCGRG	5 cut(s)	173, 780, 1265, 1272, 2048
Bsp119I	TTCGAA	1 cut(s)	2737
Bsp120I	GGGCCC	2 cut(s)	1416, 2760
Bsp13I	TCCGGA	1 cut(s)	1387
Bsp1720I	GCTNAGC	1 cut(s)	1626
Bsp19I	CCATGG	2 cut(s)	201, 1446
BspCNI	CTCAG	5 cut(s)	376, 1172, 1222, 1618, 2598
BspDI	ATCGAT	2 cut(s)	402, 2752
BspEI	TCCGGA	1 cut(s)	1387
BspMAI	CTGCAG	1 cut(s)	460
BspMI	ACCTGC	3 cut(s)	463, 1701, 2955
BspPI	GGATC	7 cut(s)	277, 1350, 1363, 1938, 2072, 2524, 2660
BspQI	GCTCTTC	1 cut(s)	2688
BspT104I	TTCGAA	1 cut(s)	2737
BspT107I	GGYRCC	3 cut(s)	610, 1102, 1820
BspTNI	GGTCTC	1 cut(s)	1262
BsrFI	RCCGGY	2 cut(s)	1171, 2632
BsrI	ACTGG	3 cut(s)	1141, 2429, 2469
BssAI	RCCGGY	2 cut(s)	1171, 2632
BssNAI	GTATAC	1 cut(s)	1975
BssNI	GRCGYC	3 cut(s)	1821, 2004, 2885
BssT1I	CCWWGG	7 cut(s)	201, 339, 1446, 2764, 2806, 2846, 2957
Bst1107I	GTATAC	1 cut(s)	1975
Bst2UI	CCWGG	4 cut(s)	288, 1237, 1639, 2534
Bst6I	CTCTTC	6 cut(s)	239, 486, 558, 1014, 1601, 2688
BstACI	GRCGYC	3 cut(s)	1821, 2004, 2885
BstAPI	GCANNNNNTGC	2 cut(s)	1102, 2260
BstBAI	YACGTR	9 cut(s)	1591, 1723, 1744, 1878, 1882, 2260, 2493, 2527, 2902
BstBI	TTCGAA	1 cut(s)	2737
BstC8I	GCNNGC	8 cut(s)	1191, 1779, 1859, 2331, 2555, 2634, 2760, 2775
BstDEI	CTNAG	8 cut(s)	363, 1159, 1209, 1278, 1626, 2157, 2606, 2624
BstDSI	CCRYGG	6 cut(s)	201, 606, 1446, 1764, 1943, 2724
BstH2I	RGCGCY	1 cut(s)	1824
BstHHI	GCGC	7 cut(s)	1669, 1823, 2031, 2265, 2313, 2470, 2952
BstMAI	GTCTC	5 cut(s)	112, 1058, 1076, 1262, 1296
BstMCI	CGRYCG	3 cut(s)	1621, 1872, 2752
BstNI	CCWGG	4 cut(s)	288, 1237, 1639, 2534
BstNSI	RCATGY	3 cut(s)	731, 1861, 2396
BstPAI	GACNNNNGTC	1 cut(s)	789
BstSFI	CTRYAG	2 cut(s)	456, 2227
BstSLI	GKGCMC	5 cut(s)	1107, 1420, 1578, 2555, 2764
BstSNI	TACGTA	1 cut(s)	1878
BstV2I	GAAGAC	5 cut(s)	414, 450, 603, 1999, 2863
BstX2I	RGATCY	5 cut(s)	145, 282, 1336, 1355, 2652
BstYI	RGATCY	5 cut(s)	145, 282, 1336, 1355, 2652
BstZ17I	GTATAC	1 cut(s)	1975
Bsu15I	ATCGAT	2 cut(s)	402, 2752
BsuI	GTATCC	1 cut(s)	1680
BsuTUI	ATCGAT	2 cut(s)	402, 2752
BtgI	CCRYGG	6 cut(s)	201, 606, 1446, 1764, 1943, 2724
BtgZI	GCGATG	2 cut(s)	1767, 2046
BtrI	CACGTC	1 cut(s)	2797
BtsIMutI	CAGTG	7 cut(s)	703, 1148, 1986, 2142, 2462, 2511, 2573
BveI	ACCTGC	3 cut(s)	463, 1701, 2955
Cac8I	GCNNGC	8 cut(s)	1191, 1779, 1859, 2331, 2555, 2634, 2760, 2775
CfoI	GCGC	7 cut(s)	1669, 1823, 2031, 2265, 2313, 2470, 2952
Cfr10I	RCCGGY	2 cut(s)	1171, 2632
Cfr42I	CCGCGG	2 cut(s)	1767, 1946
Cfr9I	CCCGGG	2 cut(s)	780, 1272
ClaI	ATCGAT	2 cut(s)	402, 2752
CseI	GACGC	3 cut(s)	1658, 1993, 2874
CspAI	ACCGGT	1 cut(s)	1171
DdeI	CTNAG	8 cut(s)	363, 1159, 1209, 1278, 1626, 2157, 2606, 2624
DinI	GGCGCC	1 cut(s)	1822
DraIII	CACNNNGTG	1 cut(s)	1461
DriI	GACNNNNNGTC	1 cut(s)	196
EaeI	YGGCCR	2 cut(s)	1779, 2634
Eam1104I	CTCTTC	6 cut(s)	239, 486, 558, 1014, 1601, 2688
Eam1105I	GACNNNNNGTC	1 cut(s)	196
EarI	CTCTTC	6 cut(s)	239, 486, 558, 1014, 1601, 2688
EciI	GGCGGA	2 cut(s)	455, 2493
Ecl136II	GAGCTC	1 cut(s)	766
Eco105I	TACGTA	1 cut(s)	1878
Eco130I	CCWWGG	7 cut(s)	201, 339, 1446, 2764, 2806, 2846, 2957
Eco147I	AGGCCT	1 cut(s)	1235
Eco24I	GRGCYC	8 cut(s)	209, 768, 1365, 1420, 1632, 2678, 2764, 2779
Eco31I	GGTCTC	1 cut(s)	1262
Eco47I	GGWCC	8 cut(s)	784, 952, 1440, 1452, 1909, 2273, 2644, 2842
Eco53kI	GAGCTC	1 cut(s)	766
Eco57I	CTGAAG	2 cut(s)	615, 630
Eco72I	CACGTG	5 cut(s)	1591, 1723, 1744, 2493, 2527
Eco88I	CYCGRG	5 cut(s)	173, 780, 1265, 1272, 2048
EcoICRI	GAGCTC	1 cut(s)	766
EcoO109I	RGGNCCY	5 cut(s)	1416, 1440, 2761, 2824, 2842
EcoRI	GAATTC	3 cut(s)	985, 2119, 2484
EcoRII	CCWGG	4 cut(s)	286, 1235, 1637, 2532
EcoT14I	CCWWGG	7 cut(s)	201, 339, 1446, 2764, 2806, 2846, 2957
EcoT22I	ATGCAT	2 cut(s)	729, 2256
EcoT38I	GRGCYC	8 cut(s)	209, 768, 1365, 1420, 1632, 2678, 2764, 2779
EgeI	GGCGCC	1 cut(s)	1822
EheI	GGCGCC	1 cut(s)	1822
ErhI	CCWWGG	7 cut(s)	201, 339, 1446, 2764, 2806, 2846, 2957
Esp3I	CGTCTC	1 cut(s)	112
FalI	AAGNNNNNCTT	4 cut(s)	247, 279, 1394, 1426
FaqI	GGGAC	6 cut(s)	176, 797, 965, 1100, 1219, 2855
FauI	CCCGC	8 cut(s)	672, 1672, 1689, 1771, 2032, 2562, 2751, 2766
FauNDI	CATATG	1 cut(s)	2659
FblI	GTMKAC	2 cut(s)	1868, 1974
FriOI	GRGCYC	8 cut(s)	209, 768, 1365, 1420, 1632, 2678, 2764, 2779
FspBI	CTAG	4 cut(s)	182, 1068, 1346, 2958
GlaI	GCGC	7 cut(s)	1668, 1822, 2030, 2264, 2312, 2469, 2951
GsaI	CCCAGC	1 cut(s)	2354
GsuI	CTGGAG	2 cut(s)	507, 1325
HaeII	RGCGCY	1 cut(s)	1824
HgaI	GACGC	3 cut(s)	1658, 1993, 2874
HhaI	GCGC	7 cut(s)	1669, 1823, 2031, 2265, 2313, 2470, 2952
Hin1I	GRCGYC	3 cut(s)	1821, 2004, 2885
Hin6I	GCGC	7 cut(s)	1667, 1821, 2029, 2263, 2311, 2468, 2950
HinP1I	GCGC	7 cut(s)	1667, 1821, 2029, 2263, 2311, 2468, 2950
HincII	GTYRAC	1 cut(s)	1869
HindII	GTYRAC	1 cut(s)	1869
HindIII	AAGCTT	1 cut(s)	896
HinfI	GANTC	9 cut(s)	581, 1157, 1207, 1247, 1384, 2104, 2212, 2381, 2739
HphI	GGTGA	5 cut(s)	1161, 1852, 2180, 2683, 2804
Hpy166II	GTNNAC	6 cut(s)	331, 1149, 1455, 1869, 1975, 2113
Hpy8I	GTNNAC	6 cut(s)	331, 1149, 1455, 1869, 1975, 2113
Hpy99I	CGWCG	3 cut(s)	35, 113, 2206
HpyAV	CCTTC	8 cut(s)	733, 971, 1027, 1369, 1396, 1703, 2013, 2599
HpyCH4V	TGCA	9 cut(s)	42, 458, 727, 1096, 1464, 1986, 2254, 2500, 2524
HpyF3I	CTNAG	8 cut(s)	363, 1159, 1209, 1278, 1626, 2157, 2606, 2624
Hsp92I	GRCGYC	3 cut(s)	1821, 2004, 2885
HspAI	GCGC	7 cut(s)	1667, 1821, 2029, 2263, 2311, 2468, 2950
KasI	GGCGCC	1 cut(s)	1820
KflI	GGGWCCC	1 cut(s)	2842
Kpn2I	TCCGGA	1 cut(s)	1387
KroI	GCCGGC	1 cut(s)	2632
KroNI	GCCGGC	1 cut(s)	2634
KspI	CCGCGG	2 cut(s)	1767, 1946
LguI	GCTCTTC	1 cut(s)	2688
LweI	GCATC	6 cut(s)	714, 759, 810, 927, 2509, 2656
MaeI	CTAG	4 cut(s)	182, 1068, 1346, 2958
MflI	RGATCY	5 cut(s)	145, 282, 1336, 1355, 2652
MlsI	TGGCCA	1 cut(s)	1781
MluCI	AATT	8 cut(s)	52, 193, 871, 985, 1648, 1923, 2119, 2484
MluI	ACGCGT	1 cut(s)	2452
MluNI	TGGCCA	1 cut(s)	1781
Mly113I	GGCGCC	1 cut(s)	1821
MlyI	GAGTC	5 cut(s)	590, 1151, 1201, 2206, 2375
MmeI	TCCRAC	8 cut(s)	773, 793, 1224, 1636, 2319, 2594, 2667, 2816
Mox20I	TGGCCA	1 cut(s)	1781
Mph1103I	ATGCAT	2 cut(s)	729, 2256
MroI	TCCGGA	1 cut(s)	1387
MroNI	GCCGGC	1 cut(s)	2632
MroXI	GAANNNNTTC	1 cut(s)	2364
MscI	TGGCCA	1 cut(s)	1781
MseI	TTAA	3 cut(s)	56, 1938, 2519
MslI	CAYNNNNRTG	3 cut(s)	1535, 2237, 2306
Msp20I	TGGCCA	1 cut(s)	1781
MspA1I	CMGCKG	9 cut(s)	425, 461, 635, 650, 1049, 1766, 1777, 1945, 2350
Mva1269I	GAATGC	2 cut(s)	1223, 2256
MvaI	CCWGG	4 cut(s)	288, 1237, 1639, 2534
NaeI	GCCGGC	1 cut(s)	2634
NarI	GGCGCC	1 cut(s)	1821
NciI	CCSGG	7 cut(s)	781, 782, 1273, 1274, 2148, 2326, 2678
NcoI	CCATGG	2 cut(s)	201, 1446
NdeI	CATATG	1 cut(s)	2659
NgoMIV	GCCGGC	1 cut(s)	2632
NmeAIII	GCCGAG	1 cut(s)	1537
NmuCI	GTSAC	8 cut(s)	1167, 1537, 1552, 1744, 2317, 2448, 2792, 2966
NsiI	ATGCAT	2 cut(s)	729, 2256
NspI	RCATGY	3 cut(s)	731, 1861, 2396
NspV	TTCGAA	1 cut(s)	2737
PaeI	GCATGC	1 cut(s)	1861
PaeR7I	CTCGAG	1 cut(s)	173
PaqCI	CACCTGC	1 cut(s)	1701
PceI	AGGCCT	1 cut(s)	1235
PciSI	GCTCTTC	1 cut(s)	2688
PcsI	WCGNNNNNNNCGW	7 cut(s)	105, 171, 1596, 1728, 1749, 1874, 2007
PctI	GAATGC	2 cut(s)	1223, 2256
PdiI	GCCGGC	1 cut(s)	2634
PdmI	GAANNNNTTC	1 cut(s)	2364
PfeI	GAWTC	4 cut(s)	1247, 1384, 2104, 2739
Pfl23II	CGTACG	3 cut(s)	801, 1058, 1878
PinAI	ACCGGT	1 cut(s)	1171
Ple19I	CGATCG	2 cut(s)	1621, 2752
PleI	GAGTC	5 cut(s)	589, 1151, 1201, 2206, 2375
PluTI	GGCGCC	1 cut(s)	1824
PmaCI	CACGTG	5 cut(s)	1591, 1723, 1744, 2493, 2527
PmlI	CACGTG	5 cut(s)	1591, 1723, 1744, 2493, 2527
PpsI	GAGTC	5 cut(s)	589, 1151, 1201, 2206, 2375
Ppu21I	YACGTR	9 cut(s)	1591, 1723, 1744, 1878, 1882, 2260, 2493, 2527, 2902
PpuMI	RGGWCCY	2 cut(s)	1440, 2842
PshAI	GACNNNNGTC	1 cut(s)	789
Psp124BI	GAGCTC	1 cut(s)	768
Psp5II	RGGWCCY	2 cut(s)	1440, 2842
Psp6I	CCWGG	4 cut(s)	286, 1235, 1637, 2532
PspCI	CACGTG	5 cut(s)	1591, 1723, 1744, 2493, 2527
PspFI	CCCAGC	1 cut(s)	2350
PspGI	CCWGG	4 cut(s)	286, 1235, 1637, 2532
PspLI	CGTACG	3 cut(s)	801, 1058, 1878
PspOMI	GGGCCC	2 cut(s)	1416, 2760
PspPPI	RGGWCCY	2 cut(s)	1440, 2842
PspXI	VCTCGAGB	1 cut(s)	173
PsrI	GAACNNNNNNTAC	2 cut(s)	1943, 1975
PstI	CTGCAG	1 cut(s)	460
PsuI	RGATCY	5 cut(s)	145, 282, 1336, 1355, 2652
PvuI	CGATCG	2 cut(s)	1621, 2752
PvuII	CAGCTG	3 cut(s)	650, 1049, 1777
RseI	CAYNNNNRTG	3 cut(s)	1535, 2237, 2306
SacI	GAGCTC	1 cut(s)	768
SacII	CCGCGG	2 cut(s)	1767, 1946
SalI	GTCGAC	1 cut(s)	1867
SapI	GCTCTTC	1 cut(s)	2688
SaqAI	TTAA	3 cut(s)	56, 1938, 2519
ScaI	AGTACT	1 cut(s)	262
SchI	GAGTC	5 cut(s)	590, 1151, 1201, 2206, 2375
SfaNI	GCATC	6 cut(s)	714, 759, 810, 927, 2509, 2656
SfcI	CTRYAG	2 cut(s)	456, 2227
SfoI	GGCGCC	1 cut(s)	1822
Sfr274I	CTCGAG	1 cut(s)	173
Sfr303I	CCGCGG	2 cut(s)	1767, 1946
SfuI	TTCGAA	1 cut(s)	2737
SgrBI	CCGCGG	2 cut(s)	1767, 1946
SinI	GGWCC	8 cut(s)	784, 952, 1440, 1452, 1909, 2273, 2644, 2842
SlaI	CTCGAG	1 cut(s)	173
SmaI	CCCGGG	2 cut(s)	782, 1274
SmiMI	CAYNNNNRTG	3 cut(s)	1535, 2237, 2306
SmlI	CTYRAG	1 cut(s)	173
SmoI	CTYRAG	1 cut(s)	173
SnaBI	TACGTA	1 cut(s)	1878
SpeI	ACTAGT	1 cut(s)	1067
SphI	GCATGC	1 cut(s)	1861
Sse9I	AATT	8 cut(s)	52, 193, 871, 985, 1648, 1923, 2119, 2484
SseBI	AGGCCT	1 cut(s)	1235
SspDI	GGCGCC	1 cut(s)	1820
SspI	AATATT	1 cut(s)	2862
SspMI	CTAG	4 cut(s)	182, 1068, 1346, 2958
SstI	GAGCTC	1 cut(s)	768
StuI	AGGCCT	1 cut(s)	1235
StyI	CCWWGG	7 cut(s)	201, 339, 1446, 2764, 2806, 2846, 2957
TaqII	GACCGA	2 cut(s)	801, 1886
TasI	AATT	8 cut(s)	52, 193, 871, 985, 1648, 1923, 2119, 2484
TatI	WGTACW	1 cut(s)	260
TauI	GCSGC	9 cut(s)	428, 431, 434, 437, 440, 475, 1769, 1821, 2299
TfiI	GAWTC	4 cut(s)	1247, 1384, 2104, 2739
Tru1I	TTAA	3 cut(s)	56, 1938, 2519
Tru9I	TTAA	3 cut(s)	56, 1938, 2519
TscAI	CASTG	7 cut(s)	703, 1148, 1993, 2142, 2469, 2518, 2580
TseFI	GTSAC	8 cut(s)	1167, 1537, 1552, 1744, 2317, 2448, 2792, 2966
Tsp45I	GTSAC	8 cut(s)	1167, 1537, 1552, 1744, 2317, 2448, 2792, 2966
TspDTI	ATGAA	7 cut(s)	420, 864, 2049, 2184, 2362, 2569, 2706
TspGWI	ACGGA	4 cut(s)	364, 1076, 2741, 2954
TspMI	CCCGGG	2 cut(s)	780, 1272
TspRI	CASTG	7 cut(s)	703, 1148, 1993, 2142, 2469, 2518, 2580
VpaK11BI	GGWCC	8 cut(s)	784, 952, 1440, 1452, 1909, 2273, 2644, 2842
XapI	RAATTY	4 cut(s)	52, 985, 2119, 2484
XceI	RCATGY	3 cut(s)	731, 1861, 2396
XhoI	CTCGAG	1 cut(s)	173
XmaI	CCCGGG	2 cut(s)	780, 1272
XmaJI	CCTAGG	1 cut(s)	2957
XmiI	GTMKAC	2 cut(s)	1868, 1974
XmnI	GAANNNNTTC	1 cut(s)	2364
XspI	CTAG	4 cut(s)	182, 1068, 1346, 2958
ZrmI	AGTACT	1 cut(s)	262
Zsp2I	ATGCAT	2 cut(s)	729, 2256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.