Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0017073

Physical Location & Seq

Genomic Coordinates Reverse (-)

11118207 .. 11121129

Gene Structure 2923 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g18840.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGTGGAGGCAAGTAATATCCTCATCATCAGCTCTTGGCTCAGCCCCATGCAGATCCAGCCATCCATTCCTCATATCATCTTCCTTGGCAATGGAGTCATTTCAGGAATCATTCACTCTGTCATCCTTCTATTCTTCTTTTGCTTCGTCTTCTAGTTCTGCATTTGCTATGAATCCTGAGCATGAGGAGGTTGATTCTGAGCTTGAGGGAAGGAACAATGCATCCAGGCAGAGTGCAACCTACAGTGGGTTTTACGGTCAAAATAATCAGCAGTGGCAACAGAACCCAAATGCGGTTTATGCTGATAGTTCAAGGGCTCCCCAACAGAGCTCATACCAGTTTGGTCAGAATTACAGTGGGGGGTTCAAGGGAAGCACAGACATTGAGTTTGTGAATAATCCAGTTCAACAAAGTGGAAACTTTAGCGGGTTTTGTGGGCCTGAAACTGGAAGGTTGCAGCAAACCACACAACAAGATTGGACACATCTAGGACGTGGAAGTATACAGCAGAATTCATATGTTGCTCACCAGGAAAAGCCTAGGGAACTAGGACAGATTCCATATGGTTTTAAATCACAAAGCAGTTTAGGTTCTCAGGGAAGTATAAACCACAGCTCTTTGCAACATTCTATAGATTATCAGAAAAATACAATCGGTTACAACATAGGAAGCAGTTCTGCACAAAAGCAGCAAAATTTAAATGATTATTATAAAGGTAATGGACAGTATCAGCAGAGTGTTGGTTATGGACGGTTTCAGCCAAGCCCACATGTTGGACAATATCAGCAAATCCCCCAGGTCGGACAATATCAGCAAAGCCCCGAGGTCGGACAGTATCAGCAAAGCTCCGCGGTCGGACAGTATCAGCAAAGCCCCCAGGTTGGACAGTACCAGCAAACCCCACAGGGTGGAGAACCAGGTGAGGCTTCTGATAGTAACCCTAATAGCGTTAAGGGTACTCTTGAAGAGTTGGATTTGTTTTGCAAGGAGGGGAAAGTTAAGGAGGCTGTGGAGGTCTTGGGTCTGCTGAAGAAGCAGCATGTGCACGTGAACTTGGACCAATATTTTCAGCTGATGCATGCATGCGGGGAGGCTAATGCCCTTGAAGAAGCAAAAGCTGTTCATGAAAACATGCGGTTACTTTCTCCTTTAGAAGTGAGTACCTACAACAGAATTTTAGAGATGTATTCAAAATGTGGTTCTATGGAGAATGCATTAATGGTTTTCAATGATATGCCAAAGCGCAATTTGACGTCTTGGGACATTATGATCACATGGTTTGCTAAGAATGGTCTTGGGGAAGATGCCATCGATCTATTTACTCAGTTCAAGAAAGCAGGGTTGAAACCCGACGATCAAATGTTTAATGGGGTTCTCTATGCTTGTAGTGTCGTGGGAGATGCTGAGGAAGGATTGCTGCATTTTGAATCAATGAGCAAAGATTATGGCATTGTCCCAACCATGAAAAATCATGTGTGTGTAGTAGATATGCTTGGATCTATAGGTTTTCTGGATGAGGCATTGGAGTTCATTGAAAAAATGCCATTGGGACCTAATGTTGATGTTTGGAAAACCTTGATGCATTATTGCAGAGTTCATGGGTATTTGGAGCTTGGGGATTGTTGTGCTGAGCTAGTTGATCAGCTGGATCCCTCCTGCTTAAATGAGCAATCAAAGGCTGGCCTTATTCCTGTGAATGAATCAGACCTCGTAAAGGAGAAAGAGAAGAAACAATTAGCAGCTAAAAATCTCTTAGAGGTCAGGAGTCGAGTCCATGAATATAGAGCAGGAGATAGATCTCATCCTGATAATGAGAAGTTTTACACTCTACTTAGGGGTTTGAGGGAACAAATGAAGGAGGCTGGTTACATTCCAGAGACTAGATTTGTGTTGCATGACATCGATCAGGAAGGCAAGGAAGATGCTTTGCTTAGCCATAGTGAGAGACTTGCTGTTGCTGATGGTCTTCTTTCCAGCTCAGCTCGTTCACCACCTATTAGGGTAATCAAGAATCTTCGTGTATGTGGTGATTGCCACTCTGCTTTAAAGATTATTTCCAAAATTGTAGGTAGAGAACTTATTATGCGAGATGCTAAGAGGTTCCACCATCTCAAAGACGGCAAGTGCTCTTGCAATGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

716

Amino Acids

79.86

Weight (kDa)

5.69

Isoelectric Point (pI)

47.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	386 - 417	1.3e-06	PPR repeat family
PPR_2	PF13041	416 - 462	1.1e-06	PPR repeat family
DYW_deaminase	PF14432	622 - 715	1.1e-38	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017073)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32450
fragaria_vesca	FvH4_1g18840 FvH4_2g29640
rosa_chinensis	RchiOBHm_Chr6g0298611
rosa_laevigata	RLG00000011499
rosa_multiflora	Rmu_sc0004500.1_g000016
rosa_roxburghii	Rroxscaffold_7G00169490
rosa_rugosa	Rorug06G0281700
rosa_samantha	Rh6AG393100 Rh6BG400800 Rh6CG406800 Rh6DG393400
rosa_wichuraiana	Rw6G034360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	711
AatII	GACGTC	1 cut(s)	1256
AccB7I	CCANNNNNTGG	2 cut(s)	773, 908
AccI	GTMKAC	1 cut(s)	502
AccII	CGCG	1 cut(s)	851
AciI	CCGC	6 cut(s)	293, 426, 849, 851, 1086, 1135
AclWI	GGATC	4 cut(s)	48, 1504, 1643, 1656
AcsI	RAATTY	3 cut(s)	511, 694, 1173
AcuI	CTGAAG	1 cut(s)	1049
AcvI	CACGTG	1 cut(s)	1048
AcyI	GRCGYC	1 cut(s)	1253
AdeI	CACNNNGTG	1 cut(s)	908
AfaI	GTAC	3 cut(s)	890, 958, 1162
AfiI	CCNNNNNNNGG	9 cut(s)	246, 292, 446, 773, 800, 827, 881, 908, 1714
AflIII	ACRYGT	1 cut(s)	769
AjiI	CACGTC	1 cut(s)	494
AjnI	CCWGG	5 cut(s)	224, 528, 795, 876, 916
AloI	GAACNNNNNNTCC	2 cut(s)	206, 238
Alw21I	GWGCWC	3 cut(s)	332, 1047, 2129
Alw26I	GTCTC	2 cut(s)	1871, 1939
Alw44I	GTGCAC	1 cut(s)	1043
AlwI	GGATC	4 cut(s)	48, 1504, 1643, 1656
Ama87I	CYCGRG	1 cut(s)	821
AoxI	GGCC	2 cut(s)	437, 1681
ApaLI	GTGCAC	1 cut(s)	1043
ApeKI	GCWGC	5 cut(s)	457, 688, 1036, 1417, 1739
ApoI	RAATTY	3 cut(s)	511, 694, 1173
ArsI	GACNNNNNNTTYG	2 cut(s)	371, 403
AseI	ATTAAT	1 cut(s)	1217
Asp700I	GAANNNNTTC	1 cut(s)	673
AspA2I	CCTAGG	1 cut(s)	539
AspLEI	GCGC	1 cut(s)	1245
AspS9I	GGNCC	3 cut(s)	437, 1057, 1550
AsuHPI	GGTGA	4 cut(s)	518, 932, 1980, 2039
AvaI	CYCGRG	1 cut(s)	821
AvaII	GGWCC	2 cut(s)	1057, 1550
AvrII	CCTAGG	1 cut(s)	539
BaeGI	GKGCMC	1 cut(s)	1047
BamHI	GGATCC	1 cut(s)	1648
BanII	GRGCYC	2 cut(s)	319, 332
BbrPI	CACGTG	1 cut(s)	1048
BbsI	GAAGAC	2 cut(s)	141, 1958
Bbv12I	GWGCWC	3 cut(s)	332, 1047, 2129
BbvCI	CCTCAGC	1 cut(s)	1404
BbvI	GCAGC	5 cut(s)	469, 700, 1048, 1404, 1751
BccI	CCATC	4 cut(s)	69, 1316, 1955, 2115
BceAI	ACGGC	1 cut(s)	2134
BciT130I	CCWGG	5 cut(s)	226, 530, 797, 878, 918
BclI	TGATCA	2 cut(s)	1269, 1639
BcoDI	GTCTC	2 cut(s)	1871, 1939
BfaI	CTAG	6 cut(s)	153, 488, 540, 548, 1634, 1881
BfmI	CTRYAG	3 cut(s)	241, 630, 1500
BglII	AGATCT	1 cut(s)	1796
BisI	GCNGC	5 cut(s)	458, 689, 1037, 1418, 1740
BlnI	CCTAGG	1 cut(s)	539
BlpI	GCTNAGC	4 cut(s)	40, 1629, 1931, 1978
BlsI	GCNGC	5 cut(s)	459, 690, 1038, 1419, 1741
Bme1390I	CCNGG	5 cut(s)	226, 530, 797, 878, 918
Bme18I	GGWCC	2 cut(s)	1057, 1550
BmeT110I	CYCGRG	1 cut(s)	821
BmgBI	CACGTC	1 cut(s)	494
BmgT120I	GGNCC	3 cut(s)	437, 1057, 1550
BmiI	GGNNCC	4 cut(s)	318, 1551, 1650, 2102
BmrFI	CCNGG	5 cut(s)	226, 530, 797, 878, 918
BmsI	GCATC	7 cut(s)	230, 1065, 1294, 1390, 1569, 1912, 2080
BpiI	GAAGAC	2 cut(s)	141, 1958
Bpu10I	CCTNAGC	2 cut(s)	177, 1404
Bpu1102I	GCTNAGC	4 cut(s)	40, 1629, 1931, 1978
BpuEI	CTTGAG	1 cut(s)	224
Bsa29I	ATCGAT	2 cut(s)	1311, 1902
BsaAI	YACGTR	1 cut(s)	1048
BsaHI	GRCGYC	1 cut(s)	1253
BsaJI	CCNNGG	6 cut(s)	84, 539, 795, 822, 849, 876
Bsc4I	CCNNNNNNNGG	9 cut(s)	246, 292, 446, 773, 800, 827, 881, 908, 1714
Bse1I	ACTGG	3 cut(s)	337, 401, 451
Bse3DI	GCAATG	2 cut(s)	96, 2140
BseBI	CCWGG	5 cut(s)	226, 530, 797, 878, 918
BseCI	ATCGAT	2 cut(s)	1311, 1902
BseDI	CCNNGG	6 cut(s)	84, 539, 795, 822, 849, 876
BseGI	GGATG	5 cut(s)	61, 122, 221, 1519, 1801
BseLI	CCNNNNNNNGG	9 cut(s)	246, 292, 446, 773, 800, 827, 881, 908, 1714
BseMI	GCAATG	2 cut(s)	96, 2140
BseMII	CTCAG	8 cut(s)	54, 168, 189, 608, 1337, 1395, 1620, 1992
BseNI	ACTGG	3 cut(s)	337, 401, 451
BseRI	GAGGAG	1 cut(s)	200
BseSI	GKGCMC	1 cut(s)	1047
BseXI	GCAGC	5 cut(s)	469, 700, 1048, 1404, 1751
BsgI	GTGCAG	1 cut(s)	663
Bsh1236I	CGCG	1 cut(s)	851
Bsh1285I	CGRYCG	1 cut(s)	855
BshFI	GGCC	2 cut(s)	439, 1683
BshVI	ATCGAT	2 cut(s)	1311, 1902
BsiEI	CGRYCG	1 cut(s)	855
BsiHKAI	GWGCWC	3 cut(s)	332, 1047, 2129
BsiHKCI	CYCGRG	1 cut(s)	821
BslFI	GGGAC	3 cut(s)	1274, 1439, 1563
BslI	CCNNNNNNNGG	9 cut(s)	246, 292, 446, 773, 800, 827, 881, 908, 1714
BsmAI	GTCTC	2 cut(s)	1871, 1939
BsmFI	GGGAC	3 cut(s)	1274, 1439, 1563
BsmI	GAATGC	1 cut(s)	1216
BsnI	GGCC	2 cut(s)	439, 1683
BsoBI	CYCGRG	1 cut(s)	821
Bsp1286I	GDGCHC	4 cut(s)	319, 332, 1047, 2129
Bsp143I	GATC	9 cut(s)	53, 1269, 1312, 1354, 1496, 1639, 1648, 1796, 1903
Bsp1720I	GCTNAGC	4 cut(s)	40, 1629, 1931, 1978
BspACI	CCGC	6 cut(s)	293, 426, 849, 851, 1086, 1135
BspANI	GGCC	2 cut(s)	439, 1683
BspCNI	CTCAG	8 cut(s)	53, 169, 190, 607, 1336, 1396, 1621, 1991
BspDI	ATCGAT	2 cut(s)	1311, 1902
BspFNI	CGCG	1 cut(s)	851
BspHI	TCATGA	1 cut(s)	1123
BspLI	GGNNCC	4 cut(s)	318, 1551, 1650, 2102
BspPI	GGATC	4 cut(s)	48, 1504, 1643, 1656
BsrDI	GCAATG	2 cut(s)	96, 2140
BsrI	ACTGG	3 cut(s)	337, 401, 451
BssECI	CCNNGG	6 cut(s)	84, 539, 795, 822, 849, 876
BssMI	GATC	9 cut(s)	53, 1269, 1312, 1354, 1496, 1639, 1648, 1796, 1903
BssNAI	GTATAC	1 cut(s)	503
BssNI	GRCGYC	1 cut(s)	1253
BssT1I	CCWWGG	2 cut(s)	84, 539
Bst1107I	GTATAC	1 cut(s)	503
Bst2UI	CCWGG	5 cut(s)	226, 530, 797, 878, 918
Bst4CI	ACNGT	8 cut(s)	245, 257, 356, 726, 753, 834, 861, 888
Bst6I	CTCTTC	1 cut(s)	960
BstACI	GRCGYC	1 cut(s)	1253
BstAPI	GCANNNNNTGC	1 cut(s)	1042
BstBAI	YACGTR	1 cut(s)	1048
BstC8I	GCNNGC	3 cut(s)	1080, 1084, 1681
BstDSI	CCRYGG	1 cut(s)	849
BstENI	CCTNNNNNAGG	1 cut(s)	1712
BstF5I	GGATG	5 cut(s)	61, 122, 221, 1519, 1801
BstFNI	CGCG	1 cut(s)	851
BstHHI	GCGC	1 cut(s)	1245
BstKTI	GATC	9 cut(s)	56, 1272, 1315, 1357, 1499, 1642, 1651, 1799, 1906
BstMAI	GTCTC	2 cut(s)	1871, 1939
BstMBI	GATC	9 cut(s)	53, 1269, 1312, 1354, 1496, 1639, 1648, 1796, 1903
BstMCI	CGRYCG	1 cut(s)	855
BstMWI	GCNNNNNNNGC	4 cut(s)	57, 299, 1033, 1042
BstNI	CCWGG	5 cut(s)	226, 530, 797, 878, 918
BstNSI	RCATGY	5 cut(s)	773, 1043, 1082, 1086, 1135
BstSCI	CCNGG	5 cut(s)	224, 528, 795, 876, 916
BstSFI	CTRYAG	3 cut(s)	241, 630, 1500
BstSLI	GKGCMC	1 cut(s)	1047
BstUI	CGCG	1 cut(s)	851
BstV1I	GCAGC	5 cut(s)	469, 700, 1048, 1404, 1751
BstV2I	GAAGAC	2 cut(s)	141, 1958
BstX2I	RGATCY	4 cut(s)	53, 1496, 1648, 1796
BstYI	RGATCY	4 cut(s)	53, 1496, 1648, 1796
BstZ17I	GTATAC	1 cut(s)	503
Bsu15I	ATCGAT	2 cut(s)	1311, 1902
BsuRI	GGCC	2 cut(s)	439, 1683
BsuTUI	ATCGAT	2 cut(s)	1311, 1902
BtgI	CCRYGG	1 cut(s)	849
BtrI	CACGTC	1 cut(s)	494
BtsCI	GGATG	5 cut(s)	61, 122, 221, 1519, 1801
BtsI	GCAGTG	1 cut(s)	278
BtsIMutI	CAGTG	3 cut(s)	250, 278, 361
Cac8I	GCNNGC	3 cut(s)	1080, 1084, 1681
CciI	TCATGA	1 cut(s)	1123
CfoI	GCGC	1 cut(s)	1245
Cfr13I	GGNCC	3 cut(s)	437, 1057, 1550
Cfr42I	CCGCGG	1 cut(s)	852
ClaI	ATCGAT	2 cut(s)	1311, 1902
CsiI	ACCWGGT	1 cut(s)	916
Csp6I	GTAC	3 cut(s)	889, 957, 1161
CviQI	GTAC	3 cut(s)	889, 957, 1161
DpnI	GATC	9 cut(s)	55, 1271, 1314, 1356, 1498, 1641, 1650, 1798, 1905
DpnII	GATC	9 cut(s)	53, 1269, 1312, 1354, 1496, 1639, 1648, 1796, 1903
DraI	TTTAAA	3 cut(s)	571, 699, 2046
DraIII	CACNNNGTG	1 cut(s)	908
Eam1104I	CTCTTC	1 cut(s)	960
EarI	CTCTTC	1 cut(s)	960
Ecl136II	GAGCTC	1 cut(s)	330
Eco130I	CCWWGG	2 cut(s)	84, 539
Eco24I	GRGCYC	2 cut(s)	319, 332
Eco47I	GGWCC	2 cut(s)	1057, 1550
Eco53kI	GAGCTC	1 cut(s)	330
Eco57I	CTGAAG	1 cut(s)	1049
Eco72I	CACGTG	1 cut(s)	1048
Eco88I	CYCGRG	1 cut(s)	821
EcoICRI	GAGCTC	1 cut(s)	330
EcoNI	CCTNNNNNAGG	1 cut(s)	1712
EcoO109I	RGGNCCY	1 cut(s)	1550
EcoRI	GAATTC	1 cut(s)	511
EcoRII	CCWGG	5 cut(s)	224, 528, 795, 876, 916
EcoT14I	CCWWGG	2 cut(s)	84, 539
EcoT22I	ATGCAT	5 cut(s)	223, 1080, 1084, 1216, 1584
EcoT38I	GRGCYC	2 cut(s)	319, 332
ErhI	CCWWGG	2 cut(s)	84, 539
FaqI	GGGAC	3 cut(s)	1274, 1439, 1563
FauI	CCCGC	2 cut(s)	419, 1079
FauNDI	CATATG	2 cut(s)	517, 562
FbaI	TGATCA	2 cut(s)	1269, 1639
FblI	GTMKAC	1 cut(s)	502
Fnu4HI	GCNGC	5 cut(s)	458, 689, 1037, 1418, 1740
FokI	GGATG	5 cut(s)	48, 109, 208, 1526, 1788
FriOI	GRGCYC	2 cut(s)	319, 332
Fsp4HI	GCNGC	5 cut(s)	458, 689, 1037, 1418, 1740
FspBI	CTAG	6 cut(s)	153, 488, 540, 548, 1634, 1881
GlaI	GCGC	1 cut(s)	1244
GluI	GCNGC	5 cut(s)	458, 689, 1037, 1418, 1740
HaeIII	GGCC	2 cut(s)	439, 1683
HhaI	GCGC	1 cut(s)	1245
Hin1I	GRCGYC	1 cut(s)	1253
Hin6I	GCGC	1 cut(s)	1243
HinP1I	GCGC	1 cut(s)	1243
HphI	GGTGA	4 cut(s)	518, 932, 1980, 2039
Hpy166II	GTNNAC	4 cut(s)	503, 1045, 1051, 1988
Hpy188I	TCNGA	8 cut(s)	199, 348, 642, 803, 830, 857, 931, 1705
Hpy8I	GTNNAC	4 cut(s)	503, 1045, 1051, 1988
Hpy99I	CGWCG	1 cut(s)	1355
HpyAV	CCTTC	6 cut(s)	136, 204, 444, 1403, 1849, 1904
HpyCH4III	ACNGT	8 cut(s)	245, 257, 356, 726, 753, 834, 861, 888
HpyCH4IV	ACGT	3 cut(s)	493, 1047, 1253
HpyF10VI	GCNNNNNNNGC	4 cut(s)	57, 299, 1033, 1042
HpySE526I	ACGT	3 cut(s)	493, 1047, 1253
Hsp92I	GRCGYC	1 cut(s)	1253
HspAI	GCGC	1 cut(s)	1243
Ksp22I	TGATCA	2 cut(s)	1269, 1639
KspI	CCGCGG	1 cut(s)	852
Kzo9I	GATC	9 cut(s)	53, 1269, 1312, 1354, 1496, 1639, 1648, 1796, 1903
LmnI	GCTCC	3 cut(s)	322, 851, 1609
Lsp1109I	GCAGC	5 cut(s)	469, 700, 1048, 1404, 1751
LweI	GCATC	7 cut(s)	230, 1065, 1294, 1390, 1569, 1912, 2080
MabI	ACCWGGT	1 cut(s)	916
MaeI	CTAG	6 cut(s)	153, 488, 540, 548, 1634, 1881
MaeII	ACGT	3 cut(s)	493, 1047, 1253
MaeIII	GTNAC	4 cut(s)	656, 935, 1137, 1865
MalI	GATC	9 cut(s)	55, 1271, 1314, 1356, 1498, 1641, 1650, 1798, 1905
MboI	GATC	9 cut(s)	53, 1269, 1312, 1354, 1496, 1639, 1648, 1796, 1903
MflI	RGATCY	4 cut(s)	53, 1496, 1648, 1796
MhlI	GDGCHC	4 cut(s)	319, 332, 1047, 2129
MluCI	AATT	7 cut(s)	349, 511, 694, 1173, 1246, 1733, 2061
MlyI	GAGTC	3 cut(s)	104, 1774, 1779
MmeI	TCCRAC	6 cut(s)	754, 781, 808, 835, 862, 951
Mph1103I	ATGCAT	5 cut(s)	223, 1080, 1084, 1216, 1584
MroXI	GAANNNNTTC	1 cut(s)	673
MseI	TTAA	8 cut(s)	570, 698, 951, 999, 1217, 1365, 1661, 2045
MslI	CAYNNNNRTG	1 cut(s)	1476
MspA1I	CMGCKG	3 cut(s)	851, 1072, 1645
MspR9I	CCNGG	5 cut(s)	226, 530, 797, 878, 918
Mva1269I	GAATGC	1 cut(s)	1216
MvaI	CCWGG	5 cut(s)	226, 530, 797, 878, 918
MvnI	CGCG	1 cut(s)	851
MwoI	GCNNNNNNNGC	4 cut(s)	57, 299, 1033, 1042
NdeI	CATATG	2 cut(s)	517, 562
NdeII	GATC	9 cut(s)	53, 1269, 1312, 1354, 1496, 1639, 1648, 1796, 1903
NlaIV	GGNNCC	4 cut(s)	318, 1551, 1650, 2102
NsiI	ATGCAT	5 cut(s)	223, 1080, 1084, 1216, 1584
NspI	RCATGY	5 cut(s)	773, 1043, 1082, 1086, 1135
PaeI	GCATGC	2 cut(s)	1082, 1086
PagI	TCATGA	1 cut(s)	1123
PciI	ACATGT	1 cut(s)	769
PctI	GAATGC	1 cut(s)	1216
PdmI	GAANNNNTTC	1 cut(s)	673
PfeI	GAWTC	7 cut(s)	107, 172, 194, 556, 1427, 1700, 2011
PflMI	CCANNNNNTGG	2 cut(s)	773, 908
PkrI	GCNGC	5 cut(s)	459, 690, 1038, 1419, 1741
PleI	GAGTC	3 cut(s)	103, 1773, 1778
PmaCI	CACGTG	1 cut(s)	1048
PmlI	CACGTG	1 cut(s)	1048
PpsI	GAGTC	3 cut(s)	103, 1773, 1778
Ppu21I	YACGTR	1 cut(s)	1048
PpuMI	RGGWCCY	1 cut(s)	1550
PscI	ACATGT	1 cut(s)	769
PshBI	ATTAAT	1 cut(s)	1217
PsiI	TTATAA	1 cut(s)	711
Psp124BI	GAGCTC	1 cut(s)	332
Psp5II	RGGWCCY	1 cut(s)	1550
Psp6I	CCWGG	5 cut(s)	224, 528, 795, 876, 916
PspCI	CACGTG	1 cut(s)	1048
PspGI	CCWGG	5 cut(s)	224, 528, 795, 876, 916
PspN4I	GGNNCC	4 cut(s)	318, 1551, 1650, 2102
PspPI	GGNCC	3 cut(s)	437, 1057, 1550
PspPPI	RGGWCCY	1 cut(s)	1550
PsuI	RGATCY	4 cut(s)	53, 1496, 1648, 1796
PvuII	CAGCTG	2 cut(s)	1072, 1645
RsaI	GTAC	3 cut(s)	890, 958, 1162
RsaNI	GTAC	3 cut(s)	889, 957, 1161
RseI	CAYNNNNRTG	1 cut(s)	1476
SacI	GAGCTC	1 cut(s)	332
SacII	CCGCGG	1 cut(s)	852
SaqAI	TTAA	8 cut(s)	570, 698, 951, 999, 1217, 1365, 1661, 2045
SatI	GCNGC	5 cut(s)	458, 689, 1037, 1418, 1740
Sau3AI	GATC	9 cut(s)	53, 1269, 1312, 1354, 1496, 1639, 1648, 1796, 1903
Sau96I	GGNCC	3 cut(s)	437, 1057, 1550
SchI	GAGTC	3 cut(s)	104, 1774, 1779
ScrFI	CCNGG	5 cut(s)	226, 530, 797, 878, 918
SduI	GDGCHC	4 cut(s)	319, 332, 1047, 2129
SexAI	ACCWGGT	1 cut(s)	916
SfaNI	GCATC	7 cut(s)	230, 1065, 1294, 1390, 1569, 1912, 2080
SfcI	CTRYAG	3 cut(s)	241, 630, 1500
Sfr303I	CCGCGG	1 cut(s)	852
SgrBI	CCGCGG	1 cut(s)	852
SinI	GGWCC	2 cut(s)	1057, 1550
SmiI	ATTTAAAT	1 cut(s)	699
SmiMI	CAYNNNNRTG	1 cut(s)	1476
SmlI	CTYRAG	1 cut(s)	203
SmoI	CTYRAG	1 cut(s)	203
SphI	GCATGC	2 cut(s)	1082, 1086
Sse9I	AATT	7 cut(s)	349, 511, 694, 1173, 1246, 1733, 2061
SsiI	CCGC	6 cut(s)	293, 426, 849, 851, 1086, 1135
SspI	AATATT	1 cut(s)	1064
SspMI	CTAG	6 cut(s)	153, 488, 540, 548, 1634, 1881
SstI	GAGCTC	1 cut(s)	332
StyD4I	CCNGG	5 cut(s)	224, 528, 795, 876, 916
StyI	CCWWGG	2 cut(s)	84, 539
SwaI	ATTTAAAT	1 cut(s)	699
TaaI	ACNGT	8 cut(s)	245, 257, 356, 726, 753, 834, 861, 888
TaiI	ACGT	3 cut(s)	496, 1050, 1256
TaqI	TCGA	3 cut(s)	1311, 1768, 1902
TasI	AATT	7 cut(s)	349, 511, 694, 1173, 1246, 1733, 2061
TfiI	GAWTC	7 cut(s)	107, 172, 194, 556, 1427, 1700, 2011
Tru1I	TTAA	8 cut(s)	570, 698, 951, 999, 1217, 1365, 1661, 2045
Tru9I	TTAA	8 cut(s)	570, 698, 951, 999, 1217, 1365, 1661, 2045
TscAI	CASTG	3 cut(s)	250, 278, 361
TseI	GCWGC	5 cut(s)	457, 688, 1036, 1417, 1739
TspRI	CASTG	3 cut(s)	250, 278, 361
Van91I	CCANNNNNTGG	2 cut(s)	773, 908
VneI	GTGCAC	1 cut(s)	1043
VpaK11BI	GGWCC	2 cut(s)	1057, 1550
VspI	ATTAAT	1 cut(s)	1217
XagI	CCTNNNNNAGG	1 cut(s)	1712
XapI	RAATTY	3 cut(s)	511, 694, 1173
XceI	RCATGY	5 cut(s)	773, 1043, 1082, 1086, 1135
XmaJI	CCTAGG	1 cut(s)	539
XmiI	GTMKAC	1 cut(s)	502
XmnI	GAANNNNTTC	1 cut(s)	673
XspI	CTAG	6 cut(s)	153, 488, 540, 548, 1634, 1881
ZraI	GACGTC	1 cut(s)	1254
Zsp2I	ATGCAT	5 cut(s)	223, 1080, 1084, 1216, 1584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.