Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0017073

Physical Location & Seq

Genomic Coordinates Reverse (-)

9953523 .. 9955657

Gene Structure 2135 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011499

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGCGCCGTTTCAGGGATCCTTTACTCTGTCATCCTTCCACACTTCTTTCGCTTCCTCCTCTAGTTCTGCATTTGCTACAAATCATGAGCATGATGAAGTTGAATCCGAGTTTGAGGGAAGGAACACTACATCCAGGCAGAGTGCAACATACAGTGGGCATTACGGTCAAAATAATCATCAGTGGCAACAGAACCCAAATGTGGTTTATGCCGATAGTTCAAGGGCTCCCCAGCAGAGCTCAAATCAGTTTAGTCAGAATTACAGCGGGGGTTTCAAGGGAAGCACAGGCAATGAATTTGTGAATAACCCAGTTCAACAAAGTGGAAACTTTAGTGGGTATCATGGGCATGAAAATGGAAGGTTTCAGCAAACCACCCAACAAAATTGGACACAATTAGGAAATGGAAGTATGCAGCAGAATTCATACGTGGCTCGCCAGGAAAGGCCAAGGGAAGTGGGACAGATTCCAGATGGTTTTAACTCACAAAGCAGTTCAGGATCTCAGGGAAGCATAAGCCGCAGTTCTATGCACAACTCTGCAGAATATCAGCAAAATACAATCAGCTATAACAGAGGGATCGGTGCTGCAGAAAAGCAGCAAAATTTAAGTGATTATTACAAATATAATGGACAGTATCAGCAGAGTGTTGGTTATGGACAGTATCAGCAGAGTGTTCGTTATGGACAGTATCAGTCAAGTTCACACGTCGGCGAATATCAGCAAACCCCAAATGTTGGACAATATCAGCAAACCCCCCAGGTTGGAGAATATCAGCAAAGCCCACAGGCTGGACAACCAGCTGAGGCTTCTGAAAGTAACCCTAATAGTGTTAAGGGAACTCTTGAAGAGTTGGATTTGTTTTGCAAGGAGGGGAAAGTTAAGGAGGCTGTGGAGGTCTTGGGTCTGCTGGAGAGACAGCATGTGCAGGTGAACTTGGACCGATATTTACAGTTGATGCATGCGTGTGGGGAGGCTATAGCTCTCGAAGAAGCAAAATCTGTTCATGAAAAGATTAGATTACTGTTTCCTTTGGAAGTGAGCACCTACAACAGAATTTTAGAGATGTATTCAAAATGTGGTTCTATGGAGAATGCATTAATGGTTTTCAACGATATGCCGAAGCGCAATATGACGTCTTGGGACATTATGATAACATGGCTTGCTAGGAATGGTCTTGGGGAAGATGCCATTGATCTATTTGCACAGTTCAAGAAAGCAGGGCTGAAACCTGATGGTCAAATGTTTATTGGGGTTTTCCATGCTTGTAGTGTTGTGGGAGATGCTGAAGAAGGATTACTGCATTTTGAATCAATGAGCAAAGATTATGGCATTGTCCCAACCATGGATCATTATGTGAGTGTAGTAGATATGCTCGGATCTATAGGTTTGTTGGATGAGGCTTTGGAGTTCATTGAAAAAATGCCATTGGAACCTAATGTTGATGTTTGGAAAACCTTGATGCATTTATGCAGAGTTCATGGGTACTTGGAGCTTGGGGATCATTGTGCTGAGCTAGTTGATCAGTTAGATCCCTCCTGCTTAAATGAGCATTCAAAGGCTGGCCTGGTTCCTGTGAATGAATCAGACCTCGTAAAGGAGAAAGAGAAGAAACAATTAGCAGCAAAGAATCTTTTAGAAATCAGGAGTCGAGTCCATGAATATAGAGCAGGAGATAGATCTCATCCTGATAATGAGAAGTTTTACACTCTACTTAGGGGTTTGAGGGAACAAATGAAGGAGGCTGGTTACATTCCAGAGACTAGATTTGTGTTGCATGACATAGATCAGGAAGGCAAGGAAGATGCTTTGCTTAGCCATAGTGAGAGACTTGCTGTTGCTGATGGTCTCCTCGCCAGCTCAGCTCGTTCACCTATTAGGGTAATCAAGAATCTTCGTGTTTGTGGTGATTGCCACTCTGCGTTAAAGATCATTTCCAAAATTGTAGGTAGAGAACTTATTATGCGAGATGCTAAGAGGTTCCACCATCTCAAAGATGGCAAGTGTTCTTGCAATGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

676

Amino Acids

75.82

Weight (kDa)

5.72

Isoelectric Point (pI)

42.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	347 - 378	1.6e-06	PPR repeat family
DYW_deaminase	PF14432	583 - 675	3.3e-40	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017073)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32450
fragaria_vesca	FvH4_1g18840 FvH4_2g29640
rosa_chinensis	RchiOBHm_Chr6g0298611
rosa_laevigata	RLG00000011499
rosa_multiflora	Rmu_sc0004500.1_g000016
rosa_roxburghii	Rroxscaffold_7G00169490
rosa_rugosa	Rorug06G0281700
rosa_samantha	Rh6AG393100 Rh6BG400800 Rh6CG406800 Rh6DG393400
rosa_wichuraiana	Rw6G034360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	919
AatII	GACGTC	1 cut(s)	1139
Acc36I	ACCTGC	1 cut(s)	919
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	2 cut(s)	737, 791
AciI	CCGC	2 cut(s)	267, 520
AclWI	GGATC	8 cut(s)	12, 25, 508, 587, 1356, 1387, 1509, 1526
AcsI	RAATTY	4 cut(s)	296, 421, 604, 1056
AcuI	CTGAAG	1 cut(s)	1308
AcyI	GRCGYC	2 cut(s)	5, 1136
AfaI	GTAC	1 cut(s)	1487
AfiI	CCNNNNNNNGG	7 cut(s)	14, 202, 737, 764, 791, 1345, 1597
AflIII	ACRYGT	1 cut(s)	706
AjiI	CACGTC	1 cut(s)	709
AjnI	CCWGG	4 cut(s)	134, 438, 759, 1566
AloI	GAACNNNNNNTCC	2 cut(s)	116, 148
AluBI	AGCT	8 cut(s)	240, 567, 803, 983, 1495, 1516, 1860, 1865
AluI	AGCT	8 cut(s)	240, 567, 803, 983, 1495, 1516, 1860, 1865
Alw21I	GWGCWC	2 cut(s)	242, 1046
Alw26I	GTCTC	4 cut(s)	910, 1754, 1822, 1853
AlwI	GGATC	8 cut(s)	12, 25, 508, 587, 1356, 1387, 1509, 1526
AoxI	GGCC	2 cut(s)	446, 1564
ApeKI	GCWGC	4 cut(s)	415, 587, 598, 1622
ApoI	RAATTY	4 cut(s)	296, 421, 604, 1056
AseI	ATTAAT	1 cut(s)	1100
AspLEI	GCGC	2 cut(s)	7, 1128
AspS9I	GGNCC	1 cut(s)	940
AsuHPI	GGTGA	3 cut(s)	943, 1863, 1919
AvaII	GGWCC	1 cut(s)	940
BamHI	GGATCC	1 cut(s)	17
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	2 cut(s)	229, 242
BarI	GAAGNNNNNNTAC	4 cut(s)	112, 144, 1281, 1313
Bbv12I	GWGCWC	2 cut(s)	242, 1046
BbvCI	CCTCAGC	1 cut(s)	804
BbvI	GCAGC	4 cut(s)	427, 574, 610, 1634
BccI	CCATC	5 cut(s)	467, 1229, 1838, 1991, 1995
BcgI	CGANNNNNNTGC	2 cut(s)	659, 693
BciT130I	CCWGG	4 cut(s)	136, 440, 761, 1568
BclI	TGATCA	1 cut(s)	1522
BcoDI	GTCTC	4 cut(s)	910, 1754, 1822, 1853
BfaI	CTAG	4 cut(s)	63, 1167, 1517, 1764
BfmI	CTRYAG	4 cut(s)	540, 588, 978, 1383
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	919
BglII	AGATCT	1 cut(s)	1679
BisI	GCNGC	5 cut(s)	416, 520, 588, 599, 1623
BlpI	GCTNAGC	3 cut(s)	1512, 1814, 1861
BlsI	GCNGC	5 cut(s)	417, 521, 589, 600, 1624
Bme1390I	CCNGG	4 cut(s)	136, 440, 761, 1568
Bme18I	GGWCC	1 cut(s)	940
BmgBI	CACGTC	1 cut(s)	709
BmgT120I	GGNCC	1 cut(s)	940
BmiI	GGNNCC	6 cut(s)	6, 19, 228, 1434, 1572, 1982
BmrFI	CCNGG	4 cut(s)	136, 440, 761, 1568
BmrI	ACTGGG	1 cut(s)	305
BmsI	GCATC	6 cut(s)	948, 1177, 1273, 1452, 1795, 1960
BmuI	ACTGGG	1 cut(s)	305
BpmI	CTGGAG	1 cut(s)	932
Bpu10I	CCTNAGC	1 cut(s)	804
Bpu1102I	GCTNAGC	3 cut(s)	1512, 1814, 1861
BsaAI	YACGTR	1 cut(s)	430
BsaHI	GRCGYC	2 cut(s)	5, 1136
BsaI	GGTCTC	1 cut(s)	1853
BsaJI	CCNNGG	3 cut(s)	449, 759, 1344
Bsc4I	CCNNNNNNNGG	7 cut(s)	14, 202, 737, 764, 791, 1345, 1597
Bse1I	ACTGG	1 cut(s)	311
Bse3DI	GCAATG	2 cut(s)	298, 2020
BseBI	CCWGG	4 cut(s)	136, 440, 761, 1568
BseDI	CCNNGG	3 cut(s)	449, 759, 1344
BseGI	GGATG	4 cut(s)	32, 131, 1402, 1684
BseLI	CCNNNNNNNGG	7 cut(s)	14, 202, 737, 764, 791, 1345, 1597
BseMI	GCAATG	2 cut(s)	298, 2020
BseMII	CTCAG	4 cut(s)	518, 795, 1503, 1875
BseNI	ACTGG	1 cut(s)	311
BseRI	GAGGAG	2 cut(s)	49, 1841
BseXI	GCAGC	4 cut(s)	427, 574, 610, 1634
BseYI	CCCAGC	1 cut(s)	231
BsgI	GTGCAG	1 cut(s)	947
BshFI	GGCC	2 cut(s)	448, 1566
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	2 cut(s)	242, 1046
BslFI	GGGAC	3 cut(s)	474, 1157, 1322
BslI	CCNNNNNNNGG	7 cut(s)	14, 202, 737, 764, 791, 1345, 1597
BsmAI	GTCTC	4 cut(s)	910, 1754, 1822, 1853
BsmFI	GGGAC	3 cut(s)	474, 1157, 1322
BsmI	GAATGC	2 cut(s)	1099, 1552
BsnI	GGCC	2 cut(s)	448, 1566
Bso31I	GGTCTC	1 cut(s)	1853
Bsp1286I	GDGCHC	3 cut(s)	229, 242, 1046
Bsp1720I	GCTNAGC	3 cut(s)	1512, 1814, 1861
Bsp19I	CCATGG	1 cut(s)	1344
BspACI	CCGC	2 cut(s)	267, 520
BspANI	GGCC	2 cut(s)	448, 1566
BspCNI	CTCAG	4 cut(s)	517, 796, 1504, 1874
BspHI	TCATGA	2 cut(s)	85, 1006
BspLI	GGNNCC	6 cut(s)	6, 19, 228, 1434, 1572, 1982
BspMAI	CTGCAG	2 cut(s)	544, 592
BspMI	ACCTGC	1 cut(s)	919
BspPI	GGATC	8 cut(s)	12, 25, 508, 587, 1356, 1387, 1509, 1526
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	1 cut(s)	1853
BsrDI	GCAATG	2 cut(s)	298, 2020
BsrI	ACTGG	1 cut(s)	311
BssECI	CCNNGG	3 cut(s)	449, 759, 1344
BssNI	GRCGYC	2 cut(s)	5, 1136
BssT1I	CCWWGG	2 cut(s)	449, 1344
Bst2UI	CCWGG	4 cut(s)	136, 440, 761, 1568
Bst4CI	ACNGT	8 cut(s)	155, 167, 636, 663, 690, 954, 1026, 1209
Bst6I	CTCTTC	1 cut(s)	843
BstACI	GRCGYC	2 cut(s)	5, 1136
BstBAI	YACGTR	1 cut(s)	430
BstC8I	GCNNGC	5 cut(s)	436, 963, 1164, 1564, 1858
BstDEI	CTNAG	7 cut(s)	504, 804, 1512, 1715, 1814, 1861, 1974
BstDSI	CCRYGG	1 cut(s)	1344
BstENI	CCTNNNNNAGG	1 cut(s)	1595
BstF5I	GGATG	4 cut(s)	32, 131, 1402, 1684
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 1128
BstMAI	GTCTC	4 cut(s)	910, 1754, 1822, 1853
BstMWI	GCNNNNNNNGC	2 cut(s)	519, 1862
BstNI	CCWGG	4 cut(s)	136, 440, 761, 1568
BstNSI	RCATGY	2 cut(s)	926, 965
BstSCI	CCNGG	4 cut(s)	134, 438, 759, 1566
BstSFI	CTRYAG	4 cut(s)	540, 588, 978, 1383
BstV1I	GCAGC	4 cut(s)	427, 574, 610, 1634
BstX2I	RGATCY	5 cut(s)	17, 500, 1379, 1531, 1679
BstYI	RGATCY	5 cut(s)	17, 500, 1379, 1531, 1679
BsuRI	GGCC	2 cut(s)	448, 1566
BtgI	CCRYGG	1 cut(s)	1344
BtrI	CACGTC	1 cut(s)	709
BtsCI	GGATG	4 cut(s)	32, 131, 1402, 1684
BtsIMutI	CAGTG	2 cut(s)	160, 188
BveI	ACCTGC	1 cut(s)	919
Cac8I	GCNNGC	5 cut(s)	436, 963, 1164, 1564, 1858
CciI	TCATGA	2 cut(s)	85, 1006
CfoI	GCGC	2 cut(s)	7, 1128
Cfr13I	GGNCC	1 cut(s)	940
Csp6I	GTAC	1 cut(s)	1486
CspCI	CAANNNNNGTGG	2 cut(s)	438, 473
CviQI	GTAC	1 cut(s)	1486
DdeI	CTNAG	7 cut(s)	504, 804, 1512, 1715, 1814, 1861, 1974
DinI	GGCGCC	1 cut(s)	6
Eam1104I	CTCTTC	1 cut(s)	843
EarI	CTCTTC	1 cut(s)	843
Ecl136II	GAGCTC	1 cut(s)	240
Eco130I	CCWWGG	2 cut(s)	449, 1344
Eco24I	GRGCYC	2 cut(s)	229, 242
Eco31I	GGTCTC	1 cut(s)	1853
Eco47I	GGWCC	1 cut(s)	940
Eco53kI	GAGCTC	1 cut(s)	240
Eco57I	CTGAAG	1 cut(s)	1308
EcoICRI	GAGCTC	1 cut(s)	240
EcoNI	CCTNNNNNAGG	1 cut(s)	1595
EcoRI	GAATTC	1 cut(s)	421
EcoRII	CCWGG	4 cut(s)	134, 438, 759, 1566
EcoT14I	CCWWGG	2 cut(s)	449, 1344
EcoT22I	ATGCAT	3 cut(s)	963, 1099, 1467
EcoT38I	GRGCYC	2 cut(s)	229, 242
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	449, 1344
FaqI	GGGAC	3 cut(s)	474, 1157, 1322
FauI	CCCGC	1 cut(s)	260
FbaI	TGATCA	1 cut(s)	1522
Fnu4HI	GCNGC	5 cut(s)	416, 520, 588, 599, 1623
FokI	GGATG	4 cut(s)	19, 118, 1409, 1671
FriOI	GRGCYC	2 cut(s)	229, 242
Fsp4HI	GCNGC	5 cut(s)	416, 520, 588, 599, 1623
FspBI	CTAG	4 cut(s)	63, 1167, 1517, 1764
GlaI	GCGC	2 cut(s)	6, 1127
GluI	GCNGC	5 cut(s)	416, 520, 588, 599, 1623
GsaI	CCCAGC	1 cut(s)	235
GsuI	CTGGAG	1 cut(s)	932
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	2 cut(s)	448, 1566
HhaI	GCGC	2 cut(s)	7, 1128
Hin1I	GRCGYC	2 cut(s)	5, 1136
Hin6I	GCGC	2 cut(s)	5, 1126
HinP1I	GCGC	2 cut(s)	5, 1126
HinfI	GANTC	8 cut(s)	104, 466, 1310, 1583, 1630, 1648, 1653, 1891
HphI	GGTGA	3 cut(s)	943, 1863, 1919
Hpy166II	GTNNAC	3 cut(s)	704, 934, 1871
Hpy188I	TCNGA	5 cut(s)	109, 258, 814, 1379, 1588
Hpy8I	GTNNAC	3 cut(s)	704, 934, 1871
Hpy99I	CGWCG	1 cut(s)	713
HpyAV	CCTTC	6 cut(s)	46, 114, 354, 1286, 1732, 1787
HpyCH4III	ACNGT	8 cut(s)	155, 167, 636, 663, 690, 954, 1026, 1209
HpyCH4IV	ACGT	3 cut(s)	429, 708, 1136
HpyF10VI	GCNNNNNNNGC	2 cut(s)	519, 1862
HpyF3I	CTNAG	7 cut(s)	504, 804, 1512, 1715, 1814, 1861, 1974
HpySE526I	ACGT	3 cut(s)	429, 708, 1136
Hsp92I	GRCGYC	2 cut(s)	5, 1136
HspAI	GCGC	2 cut(s)	5, 1126
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	1522
LmnI	GCTCC	2 cut(s)	232, 1492
Lsp1109I	GCAGC	4 cut(s)	427, 574, 610, 1634
LweI	GCATC	6 cut(s)	948, 1177, 1273, 1452, 1795, 1960
MaeI	CTAG	4 cut(s)	63, 1167, 1517, 1764
MaeII	ACGT	3 cut(s)	429, 708, 1136
MaeIII	GTNAC	2 cut(s)	818, 1748
MboII	GAAGA	7 cut(s)	860, 1001, 1196, 1301, 1621, 1814, 1886
MflI	RGATCY	5 cut(s)	17, 500, 1379, 1531, 1679
MhlI	GDGCHC	3 cut(s)	229, 242, 1046
MluCI	AATT	9 cut(s)	259, 296, 385, 395, 421, 604, 1056, 1616, 1941
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	1657, 1662
MmeI	TCCRAC	4 cut(s)	718, 745, 834, 1374
Mph1103I	ATGCAT	3 cut(s)	963, 1099, 1467
MseI	TTAA	7 cut(s)	480, 608, 834, 882, 1100, 1544, 1925
MslI	CAYNNNNRTG	4 cut(s)	90, 348, 354, 966
MspA1I	CMGCKG	2 cut(s)	267, 803
MspR9I	CCNGG	4 cut(s)	136, 440, 761, 1568
Mva1269I	GAATGC	2 cut(s)	1099, 1552
MvaI	CCWGG	4 cut(s)	136, 440, 761, 1568
MwoI	GCNNNNNNNGC	2 cut(s)	519, 1862
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	1 cut(s)	1344
NlaIV	GGNNCC	6 cut(s)	6, 19, 228, 1434, 1572, 1982
NsiI	ATGCAT	3 cut(s)	963, 1099, 1467
NspI	RCATGY	2 cut(s)	926, 965
PaeI	GCATGC	1 cut(s)	965
PagI	TCATGA	2 cut(s)	85, 1006
PaqCI	CACCTGC	1 cut(s)	919
PctI	GAATGC	2 cut(s)	1099, 1552
PfeI	GAWTC	6 cut(s)	104, 466, 1310, 1583, 1630, 1891
PflMI	CCANNNNNTGG	2 cut(s)	737, 791
PkrI	GCNGC	5 cut(s)	417, 521, 589, 600, 1624
PleI	GAGTC	2 cut(s)	1656, 1661
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	1656, 1661
Ppu21I	YACGTR	1 cut(s)	430
PshBI	ATTAAT	1 cut(s)	1100
Psp124BI	GAGCTC	1 cut(s)	242
Psp6I	CCWGG	4 cut(s)	134, 438, 759, 1566
PspFI	CCCAGC	1 cut(s)	231
PspGI	CCWGG	4 cut(s)	134, 438, 759, 1566
PspN4I	GGNNCC	6 cut(s)	6, 19, 228, 1434, 1572, 1982
PspPI	GGNCC	1 cut(s)	940
PstI	CTGCAG	2 cut(s)	544, 592
PsuI	RGATCY	5 cut(s)	17, 500, 1379, 1531, 1679
PvuII	CAGCTG	1 cut(s)	803
RsaI	GTAC	1 cut(s)	1487
RsaNI	GTAC	1 cut(s)	1486
RseI	CAYNNNNRTG	4 cut(s)	90, 348, 354, 966
SacI	GAGCTC	1 cut(s)	242
SaqAI	TTAA	7 cut(s)	480, 608, 834, 882, 1100, 1544, 1925
SatI	GCNGC	5 cut(s)	416, 520, 588, 599, 1623
Sau96I	GGNCC	1 cut(s)	940
SchI	GAGTC	2 cut(s)	1657, 1662
ScrFI	CCNGG	4 cut(s)	136, 440, 761, 1568
SduI	GDGCHC	3 cut(s)	229, 242, 1046
SfaNI	GCATC	6 cut(s)	948, 1177, 1273, 1452, 1795, 1960
SfcI	CTRYAG	4 cut(s)	540, 588, 978, 1383
SfoI	GGCGCC	1 cut(s)	6
SinI	GGWCC	1 cut(s)	940
SmiMI	CAYNNNNRTG	4 cut(s)	90, 348, 354, 966
SphI	GCATGC	1 cut(s)	965
Sse9I	AATT	9 cut(s)	259, 296, 385, 395, 421, 604, 1056, 1616, 1941
SsiI	CCGC	2 cut(s)	267, 520
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	4 cut(s)	63, 1167, 1517, 1764
SstI	GAGCTC	1 cut(s)	242
StyD4I	CCNGG	4 cut(s)	134, 438, 759, 1566
StyI	CCWWGG	2 cut(s)	449, 1344
TaaI	ACNGT	8 cut(s)	155, 167, 636, 663, 690, 954, 1026, 1209
TaiI	ACGT	3 cut(s)	432, 711, 1139
TaqI	TCGA	2 cut(s)	987, 1651
TaqII	GACCGA	1 cut(s)	957
TasI	AATT	9 cut(s)	259, 296, 385, 395, 421, 604, 1056, 1616, 1941
TauI	GCSGC	1 cut(s)	522
TfiI	GAWTC	6 cut(s)	104, 466, 1310, 1583, 1630, 1891
Tru1I	TTAA	7 cut(s)	480, 608, 834, 882, 1100, 1544, 1925
Tru9I	TTAA	7 cut(s)	480, 608, 834, 882, 1100, 1544, 1925
TscAI	CASTG	2 cut(s)	160, 188
TseI	GCWGC	4 cut(s)	415, 587, 598, 1622
TspRI	CASTG	2 cut(s)	160, 188
Van91I	CCANNNNNTGG	2 cut(s)	737, 791
VpaK11BI	GGWCC	1 cut(s)	940
VspI	ATTAAT	1 cut(s)	1100
XagI	CCTNNNNNAGG	1 cut(s)	1595
XapI	RAATTY	4 cut(s)	296, 421, 604, 1056
XceI	RCATGY	2 cut(s)	926, 965
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1994
XspI	CTAG	4 cut(s)	63, 1167, 1517, 1764
ZraI	GACGTC	1 cut(s)	1137
Zsp2I	ATGCAT	3 cut(s)	963, 1099, 1467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.