Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0007191

Physical Location & Seq

Genomic Coordinates Forward (+)

11234743 .. 11241874

Gene Structure 7132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g18940.t8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3120 bp

ATGTTTCTGTTGGCTTTAAGCTTCGTTCCTTCTCCATCCCCTTGTGTTTTGTTACAACTCGTTTTGTATCCTTGTACAAAACAATTCAAAGTTTCAAACCCTTCCAAAATTGTAATATATATAAGTAAAAATATGCAAAGCGGATCAGCTACTGGTCTTCTCTCTTCTGAGATGTCTCCTAACAACTGGAGACCATCATCATCCCTCTTCCTCCTCCTCCTCCAATTTATCATATCATCATCAAATTCACACCCTCAGTTCCCATGCAGCCAACCCCACCACAACACCCTGTACCCTTTCTGCAACACCTCTCTCCCAACCTCCACCAGAGCCCAGTCTCTAGTTTCCCTCCTCACCCTCAATGAGAAAATCCAGCAGCTCTCCAACTCTGCCTCTGGAATCCCCAGACTTGGAATCCCACCTTATGAGTGGTGGTCTGAGTCCCTCCATGGAATTGCCACTAATGGCCCTGGTGTCTCCTTCAATGGCTCCATCGCTTCTGCCACAAGCTTCCCACAAGTGATTGTCACTGCAGCTGCTTTCAATAGGACTCTGTGGAACCTCATTGGGTCTGCCATTGCTGTTGAGGCCAGAGCTATGTACAACTTTGGGCAGGCTGGATTGACATTTTGGGCACCTAATATTAATATCTTTAGGGACCCAAGATGGGGGAGAGGCCAGGAGACCCCTGGGGAAGATCCCATGGTTGCTTCTGCTTATGCTGTTGAGTTTGTCAAGGGGTTTCAAGGTGGGAGTTGGGGAGGTGGGAGTGGTGTTAGGAATGGGTTTGGAGGGAGAAGAGTGTTGGAGGAGAGTGATGGGCTAATGCTCTCTGCTTGTTGCAAGCATTTCACTGCTTATGACTTGGAGATGTGGGGGAAGTATAGTAGATATAGCTTCAATGCAGTGGTTTCAGAACAAGATTTGGAGGACACATATCAGCCGCCTTTTCGTAGTTGCATACAACAAGGCAAAGCTAGCTGTTTGATGTGTTCCTACAATGCAGTAAATGGGGTTCCAGCATGTGCAGACAAGGATTTGTTGGACAAAGTTCGAGAGGAATGGGGCTTTAAAGGGTATATCACCTCAGACTGTGATGCTGTGGCCACAGTTTTTGAATATCAGAATTATACAAAAACTATTGAAGATGCAGTTGCTGATGTTCTTAAAGCAGGGACGGATATTAATTGTGGTACATACTTGGTTCGAAATACTCTTTCTACAATCAAACAAGGAAAGGTGCAAGAGGAAGACATAGACAGGGCTCTTCTCAATCTTTTCTCCGTTCAACTCCGTCTTGGGCTGTTTGATGGAGATCCCATAAAAGGCCAATATGGAAGGTTGGGACCTCAAGACGTGTGTACATCAGAGCACAAAAATTTGGCACTCGAAGCAGCAAGGCAGGGAATTGTGCTTCTTAAAAATGATAAGAAGTTCTTGCCTTTGAATAAGGGTGTTGATTTTTCATTGGCTGTTATTGGTCCATTGGCAAACAATGCAAGTTTGCTGGGTGGGGGTTACACAGGGATTCCCTGCAACCCAAAGACTCCTTTTGAGGGTCTTCAGGAGTACAGAAAAGGAACATCTTACACAGCTGGTTGCCATGATGTACCATGTGATTCTGATACTGGGTTCAAGGAAGCAATTCATGCTGCCAAGGAAGCTGATTTTTCTGTTATAGTTGTTGGTCTTGATGCGTCACAAGAAAGAGAAGATCATGACCGAGTTAGTCTTCTCCTACCTGGTAAGCAGATGGCCCTTGTATCTTCAGTAGCTGCTGCGAGTAAAAACCCAGTGATTCTAGTTCTTGCTGGTGGTGGACCACTTGATGTATCATTTGCCAAAAAAGACCCGCGAATTGCTAGCATTCTTTATATTGGATACCCTGGTGAAACTGGTGGGAGGGCACTATCAGAAATCATCTTTGGAGACTTTAATCCAAGTGGAAGGCTGACTATGACTTGGTATTTTGAGTCATTCACAAACATCCCAATGAACGATATGAACATGAGGGCTGATCCTTCTCGCGGCTATCCAGGAAGAACCTACCGGTTCTACACAGGGAATAGGGTGTATGGATTTGGACATGGTTTGAGCTACACAAATTTCACATACAACATTGTTTCAGCTCCGACCAAATTAAGCATACAAACACCATTCAAGGTTTATTCAATCAAAAACGTACTTCATCAAGCAGGAGATGCAAATGGTTATTTACGCCTAGATGAGAGCTCAGACCTAGTCGAAACCAGTCCTCACCGCCAGACCTTCGTCTACTCCGTCTCCGACGATACACCAGCAGCAATCATGGCAGACGATCAGAATGATGTGAAAGAAGAGGTGGCGCTGGCAGATGTTGCACCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATTGAGGATCCGGCTGATGATTCTGTGGATAAGTTGGCTGAGAAAACGGAAAGCCTGGCAGTTTCTGAAGGCCAGGACAGTTCCTTTACTGGCTTGAAAAAGAAAAAGAAGAAGCCAATCGAAACTAGCATTTTGAATGAGGAGACTGGTGATGTACCAGAGGATTTGGATGAGCACCCAGCCGAGGATGAAGAAGGAGAAGGCATTATACTTGGGGCCTCCAATCCTTGGGAGGGAAGCGACCGTGATTATGAATATGAGGAGCTTCTTGGAAGGGTGTACAACATCCTTAGGGAGAATAATCCGGAGCTAGCTGGAGATAGGCGTAGGACAGTTATGAGGCCTCCACAAGTTCTGCGTGAGGGCACAAAGAAAACTGTCTTTGTCAATTTCATGGATCTGTGCAAGACGATGCATAGGCAACCAGAGCATGTCCAGAATTTCTTGTTGGCCGAACTGGGGACAAGTGGATCACTTGATGGACAACAGAGGTTAGTTGTGAAGGGAAGGTTTGCGCCAAAGAATTTTGAAGGGATACTGCGGCGATATGTCAATGAATATGTGATCTGTCTTGGGTGCAAAAGCCCCGACACCATACTATCAAAGGAGAATCGCCTGTATTTCCTCAGATGCGAGAAGTGCGGTTCTGGACGATCTGTTGCTCAGATCAAACAAGGTTTTGTTGCTCGTGTTGGGCGCAGGAATGCTGGGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009044 GO:0016020 GO:0016787 GO:0016798 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0097599 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

1040

Amino Acids

114.14

Weight (kDa)

6.04

Isoelectric Point (pI)

37.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	121 - 380	1.8e-33	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	426 - 604	3.2e-37	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10560
fragaria_vesca	FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940
malus_domestica	MD01G1045300.v1.1
prunus_persica	Prupe.6G210000_v2.0.a1 Prupe.6G210000_v2.0.a1
pyrus_communis	pycom01g07120
rosa_chinensis	RchiOBHm_Chr2g0109951
rosa_laevigata	RLG00000017773
rosa_multiflora	Rmu_sc0005173.1_g000029 Rmu_sc0028281.1_g000001 Rmu_sc0033728.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133850
rosa_rugosa	Rorug02G0164200
rosa_samantha	Rh2AG216100 Rh2BG226200 Rh2CG218300 Rh2DG221700
rosa_wichuraiana	Rw2G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	634
AccB7I	CCANNNNNTGG	1 cut(s)	2631
AccI	GTMKAC	1 cut(s)	2274
AccII	CGCG	2 cut(s)	1855, 2028
AccIII	TCCGGA	1 cut(s)	2707
AciI	CCGC	7 cut(s)	141, 944, 1853, 2028, 2260, 2944, 3045
AclWI	GGATC	9 cut(s)	151, 692, 1310, 2012, 2363, 2405, 2418, 2808, 2881
AcoI	YGGCCR	2 cut(s)	1104, 2853
AcsI	RAATTY	5 cut(s)	244, 1378, 2104, 2842, 2926
AcuI	CTGAAG	3 cut(s)	1547, 1752, 2490
AflIII	ACRYGT	1 cut(s)	1356
AgeI	ACCGGT	1 cut(s)	2049
AjiI	CACGTC	1 cut(s)	1357
AjnI	CCWGG	8 cut(s)	469, 678, 688, 1741, 1885, 2035, 2457, 2475
AjuI	GAANNNNNNNTTGG	4 cut(s)	1908, 1940, 2834, 2866
Alw21I	GWGCWC	3 cut(s)	1374, 2234, 2580
Alw26I	GTCTC	8 cut(s)	180, 184, 342, 481, 677, 1923, 2287, 2540
AlwI	GGATC	9 cut(s)	151, 692, 1310, 2012, 2363, 2405, 2418, 2808, 2881
AlwNI	CAGNNNCTG	4 cut(s)	152, 1157, 1775, 2468
Aor13HI	TCCGGA	1 cut(s)	2707
ApeKI	GCWGC	9 cut(s)	267, 376, 533, 536, 1394, 1652, 1775, 1778, 2300
ApoI	RAATTY	5 cut(s)	244, 1378, 2104, 2842, 2926
AseI	ATTAAT	2 cut(s)	645, 1185
AsiGI	ACCGGT	1 cut(s)	2049
Asp700I	GAANNNNTTC	1 cut(s)	1644
AspLEI	GCGC	3 cut(s)	2347, 2920, 3102
AspS9I	GGNCC	7 cut(s)	467, 658, 1346, 1481, 1756, 1820, 2619
AsuHPI	GGTGA	5 cut(s)	346, 1075, 1901, 2249, 2564
AsuII	TTCGAA	1 cut(s)	1207
AsuNHI	GCTAGC	3 cut(s)	977, 1862, 2713
AvaII	GGWCC	4 cut(s)	658, 1346, 1481, 1820
AxyI	CCTNAGG	1 cut(s)	2693
BaeGI	GKGCMC	3 cut(s)	637, 1909, 2771
BaeI	ACNNNNGTAYC	2 cut(s)	1873, 1906
BalI	TGGCCA	1 cut(s)	1106
BamHI	GGATCC	1 cut(s)	2410
BanI	GGYRCC	1 cut(s)	634
BanII	GRGCYC	3 cut(s)	334, 1267, 2234
BarI	GAAGNNNNNNTAC	2 cut(s)	2595, 2627
BauI	CACGAG	1 cut(s)	3090
BbsI	GAAGAC	4 cut(s)	149, 1257, 1553, 1724
Bbv12I	GWGCWC	3 cut(s)	1374, 2234, 2580
BbvI	GCAGC	9 cut(s)	279, 388, 523, 545, 1406, 1639, 1762, 1765, 2312
BccI	CCATC	8 cut(s)	43, 202, 500, 660, 812, 1304, 1747, 2876
BciT130I	CCWGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
BciVI	GTATCC	3 cut(s)	78, 1874, 2931
BcoDI	GTCTC	8 cut(s)	180, 184, 342, 481, 677, 1923, 2287, 2540
BfaI	CTAG	9 cut(s)	341, 978, 1802, 1863, 2222, 2240, 2373, 2529, 2714
BfmI	CTRYAG	1 cut(s)	531
BfoI	RGCGCY	1 cut(s)	2348
BfuI	GTATCC	3 cut(s)	78, 1874, 2931
Bme1390I	CCNGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
Bme18I	GGWCC	4 cut(s)	658, 1346, 1481, 1820
BmgBI	CACGTC	1 cut(s)	1357
BmgT120I	GGNCC	7 cut(s)	467, 658, 1346, 1481, 1756, 1820, 2619
BmiI	GGNNCC	9 cut(s)	490, 560, 636, 659, 660, 1017, 1347, 2412, 2620
BmrFI	CCNGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
BmrI	ACTGGG	4 cut(s)	328, 1638, 1787, 2870
BmsI	GCATC	6 cut(s)	1087, 1138, 1684, 2191, 2805, 3023
BmtI	GCTAGC	3 cut(s)	981, 1866, 2717
BmuI	ACTGGG	4 cut(s)	328, 1638, 1787, 2870
BoxI	GACNNNNGTC	1 cut(s)	2270
BpiI	GAAGAC	4 cut(s)	149, 1257, 1553, 1724
BpmI	CTGGAG	2 cut(s)	208, 2739
Bpu14I	TTCGAA	1 cut(s)	1207
BpuEI	CTTGAG	1 cut(s)	1335
BsaBI	GATNNNNATC	1 cut(s)	1314
BsaI	GGTCTC	2 cut(s)	184, 677
BsaJI	CCNNGG	9 cut(s)	448, 469, 688, 689, 702, 1656, 1885, 2586, 2630
BsaWI	WCCGGW	2 cut(s)	2049, 2707
BsaXI	ACNNNNNCTCC	2 cut(s)	2267, 2297
Bse118I	RCCGGY	1 cut(s)	2049
Bse21I	CCTNAGG	1 cut(s)	2693
Bse3DI	GCAATG	1 cut(s)	576
Bse8I	GATNNNNATC	1 cut(s)	1314
BseAI	TCCGGA	1 cut(s)	2707
BseBI	CCWGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
BseDI	CCNNGG	9 cut(s)	448, 469, 688, 689, 702, 1656, 1885, 2586, 2630
BseGI	GGATG	6 cut(s)	35, 200, 1986, 2578, 2596, 2688
BseJI	GATNNNNATC	1 cut(s)	1314
BseMI	GCAATG	1 cut(s)	576
BseMII	CTCAG	8 cut(s)	159, 269, 429, 1101, 2247, 2433, 3043, 3080
BseRI	GAGGAG	7 cut(s)	203, 206, 209, 341, 824, 2558, 2678
BseSI	GKGCMC	3 cut(s)	637, 1909, 2771
BseXI	GCAGC	9 cut(s)	279, 388, 523, 545, 1406, 1639, 1762, 1765, 2312
BseYI	CCCAGC	3 cut(s)	1507, 2581, 3110
BsgI	GTGCAG	1 cut(s)	1047
Bsh1236I	CGCG	2 cut(s)	1855, 2028
Bsh1285I	CGRYCG	1 cut(s)	2647
BshNI	GGYRCC	1 cut(s)	634
BshTI	ACCGGT	1 cut(s)	2049
BsiEI	CGRYCG	1 cut(s)	2647
BsiHKAI	GWGCWC	3 cut(s)	1374, 2234, 2580
BsiSI	CCGG	3 cut(s)	2050, 2414, 2708
BslFI	GGGAC	5 cut(s)	427, 671, 1189, 1359, 2878
BsmAI	GTCTC	8 cut(s)	180, 184, 342, 481, 677, 1923, 2287, 2540
BsmBI	CGTCTC	1 cut(s)	2287
BsmFI	GGGAC	5 cut(s)	427, 671, 1189, 1359, 2878
BsmI	GAATGC	2 cut(s)	1866, 3112
Bso31I	GGTCTC	2 cut(s)	184, 677
Bsp119I	TTCGAA	1 cut(s)	1207
Bsp1286I	GDGCHC	8 cut(s)	334, 637, 1267, 1374, 1909, 2234, 2580, 2771
Bsp13I	TCCGGA	1 cut(s)	2707
Bsp1407I	TGTACA	4 cut(s)	74, 600, 1361, 2682
Bsp19I	CCATGG	2 cut(s)	448, 702
BspACI	CCGC	7 cut(s)	141, 944, 1853, 2028, 2260, 2944, 3045
BspCNI	CTCAG	8 cut(s)	160, 268, 430, 1100, 2246, 2434, 3042, 3079
BspEI	TCCGGA	1 cut(s)	2707
BspFNI	CGCG	2 cut(s)	1855, 2028
BspHI	TCATGA	1 cut(s)	1717
BspLI	GGNNCC	9 cut(s)	490, 560, 636, 659, 660, 1017, 1347, 2412, 2620
BspMAI	CTGCAG	1 cut(s)	535
BspOI	GCTAGC	3 cut(s)	981, 1866, 2717
BspPI	GGATC	9 cut(s)	151, 692, 1310, 2012, 2363, 2405, 2418, 2808, 2881
BspQI	GCTCTTC	1 cut(s)	1272
BspT104I	TTCGAA	1 cut(s)	1207
BspT107I	GGYRCC	1 cut(s)	634
BspTNI	GGTCTC	2 cut(s)	184, 677
BsrDI	GCAATG	1 cut(s)	576
BsrFI	RCCGGY	1 cut(s)	2049
BsrGI	TGTACA	4 cut(s)	74, 600, 1361, 2682
BssAI	RCCGGY	1 cut(s)	2049
BssECI	CCNNGG	9 cut(s)	448, 469, 688, 689, 702, 1656, 1885, 2586, 2630
BssSI	CACGAG	1 cut(s)	3090
BssT1I	CCWWGG	4 cut(s)	448, 702, 1656, 2630
Bst2BI	CACGAG	1 cut(s)	3090
Bst2UI	CCWGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
Bst4CI	ACNGT	6 cut(s)	1094, 1111, 2483, 2648, 2737, 2782
Bst6I	CTCTTC	5 cut(s)	169, 212, 793, 1272, 2331
BstAPI	GCANNNNNTGC	4 cut(s)	1496, 1649, 2201, 2357
BstAUI	TGTACA	4 cut(s)	74, 600, 1361, 2682
BstBI	TTCGAA	1 cut(s)	1207
BstC8I	GCNNGC	6 cut(s)	615, 845, 979, 1864, 2349, 2715
BstDEI	CTNAG	9 cut(s)	168, 255, 438, 1087, 2233, 2442, 2693, 3029, 3066
BstDSI	CCRYGG	2 cut(s)	448, 702
BstF5I	GGATG	6 cut(s)	35, 200, 1986, 2578, 2596, 2688
BstFNI	CGCG	2 cut(s)	1855, 2028
BstH2I	RGCGCY	1 cut(s)	2348
BstHHI	GCGC	3 cut(s)	2347, 2920, 3102
BstMAI	GTCTC	8 cut(s)	180, 184, 342, 481, 677, 1923, 2287, 2540
BstMCI	CGRYCG	1 cut(s)	2647
BstNI	CCWGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
BstNSI	RCATGY	2 cut(s)	1026, 2837
BstPAI	GACNNNNGTC	1 cut(s)	2270
BstSCI	CCNGG	8 cut(s)	469, 678, 688, 1741, 1885, 2035, 2457, 2475
BstSFI	CTRYAG	1 cut(s)	531
BstSLI	GKGCMC	3 cut(s)	637, 1909, 2771
BstUI	CGCG	2 cut(s)	1855, 2028
BstV1I	GCAGC	9 cut(s)	279, 388, 523, 545, 1406, 1639, 1762, 1765, 2312
BstV2I	GAAGAC	4 cut(s)	149, 1257, 1553, 1724
BstX2I	RGATCY	4 cut(s)	697, 1315, 2410, 2800
BstYI	RGATCY	4 cut(s)	697, 1315, 2410, 2800
Bsu36I	CCTNAGG	1 cut(s)	2693
BsuI	GTATCC	3 cut(s)	78, 1874, 2931
BtgI	CCRYGG	2 cut(s)	448, 702
BtgZI	GCGATG	1 cut(s)	478
BtrI	CACGTC	1 cut(s)	1357
BtsCI	GGATG	6 cut(s)	35, 200, 1986, 2578, 2596, 2688
BtsI	GCAGTG	3 cut(s)	528, 852, 912
BtsIMutI	CAGTG	4 cut(s)	528, 852, 912, 1800
Cac8I	GCNNGC	6 cut(s)	615, 845, 979, 1864, 2349, 2715
CaiI	CAGNNNCTG	4 cut(s)	152, 1157, 1775, 2468
CciI	TCATGA	1 cut(s)	1717
CfoI	GCGC	3 cut(s)	2347, 2920, 3102
Cfr10I	RCCGGY	1 cut(s)	2049
Cfr13I	GGNCC	7 cut(s)	467, 658, 1346, 1481, 1756, 1820, 2619
CseI	GACGC	1 cut(s)	1686
CsiI	ACCWGGT	1 cut(s)	1741
CspAI	ACCGGT	1 cut(s)	2049
CspCI	CAANNNNNGTGG	2 cut(s)	1096, 1131
DdeI	CTNAG	9 cut(s)	168, 255, 438, 1087, 2233, 2442, 2693, 3029, 3066
DraI	TTTAAA	1 cut(s)	1072
EaeI	YGGCCR	2 cut(s)	1104, 2853
Eam1104I	CTCTTC	5 cut(s)	169, 212, 793, 1272, 2331
EarI	CTCTTC	5 cut(s)	169, 212, 793, 1272, 2331
Ecl136II	GAGCTC	1 cut(s)	2232
Eco130I	CCWWGG	4 cut(s)	448, 702, 1656, 2630
Eco147I	AGGCCT	1 cut(s)	2746
Eco24I	GRGCYC	3 cut(s)	334, 1267, 2234
Eco31I	GGTCTC	2 cut(s)	184, 677
Eco47I	GGWCC	4 cut(s)	658, 1346, 1481, 1820
Eco53kI	GAGCTC	1 cut(s)	2232
Eco57I	CTGAAG	3 cut(s)	1547, 1752, 2490
Eco81I	CCTNAGG	1 cut(s)	2693
EcoICRI	GAGCTC	1 cut(s)	2232
EcoO109I	RGGNCCY	3 cut(s)	658, 1346, 2619
EcoRII	CCWGG	8 cut(s)	469, 678, 688, 1741, 1885, 2035, 2457, 2475
EcoT14I	CCWWGG	4 cut(s)	448, 702, 1656, 2630
EcoT22I	ATGCAT	1 cut(s)	2820
EcoT38I	GRGCYC	3 cut(s)	334, 1267, 2234
ErhI	CCWWGG	4 cut(s)	448, 702, 1656, 2630
Esp3I	CGTCTC	1 cut(s)	2287
FalI	AAGNNNNNCTT	2 cut(s)	1421, 1453
FaqI	GGGAC	5 cut(s)	427, 671, 1189, 1359, 2878
FauI	CCCGC	1 cut(s)	1860
FblI	GTMKAC	1 cut(s)	2274
FokI	GGATG	6 cut(s)	22, 187, 1973, 2585, 2603, 2675
FriOI	GRGCYC	3 cut(s)	334, 1267, 2234
FspBI	CTAG	9 cut(s)	341, 978, 1802, 1863, 2222, 2240, 2373, 2529, 2714
GlaI	GCGC	3 cut(s)	2346, 2919, 3101
GsaI	CCCAGC	3 cut(s)	1511, 2585, 3114
GsuI	CTGGAG	2 cut(s)	208, 2739
HaeII	RGCGCY	1 cut(s)	2348
HapII	CCGG	3 cut(s)	2050, 2414, 2708
HgaI	GACGC	1 cut(s)	1686
HhaI	GCGC	3 cut(s)	2347, 2920, 3102
Hin6I	GCGC	3 cut(s)	2345, 2918, 3100
HinP1I	GCGC	3 cut(s)	2345, 2918, 3100
HindIII	AAGCTT	2 cut(s)	19, 508
HpaII	CCGG	3 cut(s)	2050, 2414, 2708
HphI	GGTGA	5 cut(s)	346, 1075, 1901, 2249, 2564
Hpy166II	GTNNAC	4 cut(s)	1362, 1820, 2275, 2683
Hpy188III	TCNNGA	9 cut(s)	396, 1055, 1352, 1565, 1691, 1718, 2708, 2839, 3051
Hpy8I	GTNNAC	4 cut(s)	1362, 1820, 2275, 2683
Hpy99I	CGWCG	1 cut(s)	2291
HpyCH4III	ACNGT	6 cut(s)	1094, 1111, 2483, 2648, 2737, 2782
HpyCH4IV	ACGT	2 cut(s)	1356, 2181
HpyF3I	CTNAG	9 cut(s)	168, 255, 438, 1087, 2233, 2442, 2693, 3029, 3066
HpySE526I	ACGT	2 cut(s)	1356, 2181
HspAI	GCGC	3 cut(s)	2345, 2918, 3100
KflI	GGGWCCC	1 cut(s)	658
Kpn2I	TCCGGA	1 cut(s)	2707
LguI	GCTCTTC	1 cut(s)	1272
LmnI	GCTCC	4 cut(s)	494, 2134, 2665, 2710
Lsp1109I	GCAGC	9 cut(s)	279, 388, 523, 545, 1406, 1639, 1762, 1765, 2312
LweI	GCATC	6 cut(s)	1087, 1138, 1684, 2191, 2805, 3023
MabI	ACCWGGT	1 cut(s)	1741
MaeI	CTAG	9 cut(s)	341, 978, 1802, 1863, 2222, 2240, 2373, 2529, 2714
MaeII	ACGT	2 cut(s)	1356, 2181
MaeIII	GTNAC	4 cut(s)	51, 526, 1517, 1698
MflI	RGATCY	4 cut(s)	697, 1315, 2410, 2800
MhlI	GDGCHC	8 cut(s)	334, 637, 1267, 1374, 1909, 2234, 2580, 2771
MlsI	TGGCCA	1 cut(s)	1106
MluNI	TGGCCA	1 cut(s)	1106
MlyI	GAGTC	4 cut(s)	449, 544, 1540, 1982
MmeI	TCCRAC	5 cut(s)	408, 786, 1023, 2156, 2310
Mox20I	TGGCCA	1 cut(s)	1106
Mph1103I	ATGCAT	1 cut(s)	2820
MroI	TCCGGA	1 cut(s)	2707
MroXI	GAANNNNTTC	1 cut(s)	1644
MscI	TGGCCA	1 cut(s)	1106
MseI	TTAA	8 cut(s)	17, 645, 1071, 1167, 1185, 1419, 1935, 2141
MslI	CAYNNNNRTG	1 cut(s)	1991
Msp20I	TGGCCA	1 cut(s)	1106
MspA1I	CMGCKG	2 cut(s)	536, 1595
MspI	CCGG	3 cut(s)	2050, 2414, 2708
MspR9I	CCNGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
Mva1269I	GAATGC	2 cut(s)	1866, 3112
MvaI	CCWGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
MvnI	CGCG	2 cut(s)	1855, 2028
NcoI	CCATGG	2 cut(s)	448, 702
NheI	GCTAGC	3 cut(s)	977, 1862, 2713
NlaIV	GGNNCC	9 cut(s)	490, 560, 636, 659, 660, 1017, 1347, 2412, 2620
NmeAIII	GCCGAG	1 cut(s)	2611
NmuCI	GTSAC	2 cut(s)	526, 1698
NsiI	ATGCAT	1 cut(s)	2820
NspI	RCATGY	2 cut(s)	1026, 2837
NspV	TTCGAA	1 cut(s)	1207
PagI	TCATGA	1 cut(s)	1717
PasI	CCCWGGG	1 cut(s)	689
PceI	AGGCCT	1 cut(s)	2746
PciSI	GCTCTTC	1 cut(s)	1272
PcsI	WCGNNNNNNNCGW	1 cut(s)	2277
PctI	GAATGC	2 cut(s)	1866, 3112
PdmI	GAANNNNTTC	1 cut(s)	1644
PfeI	GAWTC	7 cut(s)	399, 414, 1528, 1619, 1798, 2423, 3013
PflFI	GACNNNGTC	1 cut(s)	2240
PflMI	CCANNNNNTGG	1 cut(s)	2631
PfoI	TCCNGGA	1 cut(s)	2035
PinAI	ACCGGT	1 cut(s)	2049
PleI	GAGTC	4 cut(s)	448, 544, 1540, 1981
PpsI	GAGTC	4 cut(s)	448, 544, 1540, 1981
PpuMI	RGGWCCY	2 cut(s)	658, 1346
PshAI	GACNNNNGTC	1 cut(s)	2270
PshBI	ATTAAT	2 cut(s)	645, 1185
Psp124BI	GAGCTC	1 cut(s)	2234
Psp5II	RGGWCCY	2 cut(s)	658, 1346
Psp6I	CCWGG	8 cut(s)	469, 678, 688, 1741, 1885, 2035, 2457, 2475
PspFI	CCCAGC	3 cut(s)	1507, 2581, 3110
PspGI	CCWGG	8 cut(s)	469, 678, 688, 1741, 1885, 2035, 2457, 2475
PspN4I	GGNNCC	9 cut(s)	490, 560, 636, 659, 660, 1017, 1347, 2412, 2620
PspPI	GGNCC	7 cut(s)	467, 658, 1346, 1481, 1756, 1820, 2619
PspPPI	RGGWCCY	2 cut(s)	658, 1346
PsrI	GAACNNNNNNTAC	2 cut(s)	999, 1031
PstI	CTGCAG	1 cut(s)	535
PstNI	CAGNNNCTG	4 cut(s)	152, 1157, 1775, 2468
PsuI	RGATCY	4 cut(s)	697, 1315, 2410, 2800
PsyI	GACNNNGTC	1 cut(s)	2240
PvuII	CAGCTG	2 cut(s)	536, 1595
RseI	CAYNNNNRTG	1 cut(s)	1991
SacI	GAGCTC	1 cut(s)	2234
SapI	GCTCTTC	1 cut(s)	1272
SaqAI	TTAA	8 cut(s)	17, 645, 1071, 1167, 1185, 1419, 1935, 2141
Sau96I	GGNCC	7 cut(s)	467, 658, 1346, 1481, 1756, 1820, 2619
SchI	GAGTC	4 cut(s)	449, 544, 1540, 1982
ScrFI	CCNGG	8 cut(s)	471, 680, 690, 1743, 1887, 2037, 2459, 2477
SduI	GDGCHC	8 cut(s)	334, 637, 1267, 1374, 1909, 2234, 2580, 2771
SexAI	ACCWGGT	1 cut(s)	1741
SfaNI	GCATC	6 cut(s)	1087, 1138, 1684, 2191, 2805, 3023
SfcI	CTRYAG	1 cut(s)	531
SfuI	TTCGAA	1 cut(s)	1207
SinI	GGWCC	4 cut(s)	658, 1346, 1481, 1820
SmiMI	CAYNNNNRTG	1 cut(s)	1991
SmlI	CTYRAG	1 cut(s)	1350
SmoI	CTYRAG	1 cut(s)	1350
SseBI	AGGCCT	1 cut(s)	2746
SsiI	CCGC	7 cut(s)	141, 944, 1853, 2028, 2260, 2944, 3045
SspI	AATATT	1 cut(s)	643
SspMI	CTAG	9 cut(s)	341, 978, 1802, 1863, 2222, 2240, 2373, 2529, 2714
SstI	GAGCTC	1 cut(s)	2234
StuI	AGGCCT	1 cut(s)	2746
StyD4I	CCNGG	8 cut(s)	469, 678, 688, 1741, 1885, 2035, 2457, 2475
StyI	CCWWGG	4 cut(s)	448, 702, 1656, 2630
TaaI	ACNGT	6 cut(s)	1094, 1111, 2483, 2648, 2737, 2782
TaiI	ACGT	2 cut(s)	1359, 2184
TaqI	TCGA	5 cut(s)	1054, 1207, 1389, 2244, 2523
TaqII	GACCGA	1 cut(s)	1737
TatI	WGTACW	5 cut(s)	74, 600, 1361, 1569, 2682
TauI	GCSGC	3 cut(s)	946, 2031, 2947
TfiI	GAWTC	7 cut(s)	399, 414, 1528, 1619, 1798, 2423, 3013
Tru1I	TTAA	8 cut(s)	17, 645, 1071, 1167, 1185, 1419, 1935, 2141
Tru9I	TTAA	8 cut(s)	17, 645, 1071, 1167, 1185, 1419, 1935, 2141
TscAI	CASTG	4 cut(s)	535, 859, 912, 1800
TseFI	GTSAC	2 cut(s)	526, 1698
TseI	GCWGC	9 cut(s)	267, 376, 533, 536, 1394, 1652, 1775, 1778, 2300
Tsp45I	GTSAC	2 cut(s)	526, 1698
TspDTI	ATGAA	9 cut(s)	1455, 1637, 2009, 2018, 2177, 2607, 2670, 2785, 2973
TspGWI	ACGGA	5 cut(s)	1193, 1273, 1283, 2269, 2465
TspRI	CASTG	4 cut(s)	535, 859, 912, 1800
Tth111I	GACNNNGTC	1 cut(s)	2240
Van91I	CCANNNNNTGG	1 cut(s)	2631
VpaK11BI	GGWCC	4 cut(s)	658, 1346, 1481, 1820
VspI	ATTAAT	2 cut(s)	645, 1185
XapI	RAATTY	5 cut(s)	244, 1378, 2104, 2842, 2926
XceI	RCATGY	2 cut(s)	1026, 2837
XcmI	CCANNNNNNNNNTGG	2 cut(s)	426, 686
XmiI	GTMKAC	1 cut(s)	2274
XmnI	GAANNNNTTC	1 cut(s)	1644
XspI	CTAG	9 cut(s)	341, 978, 1802, 1863, 2222, 2240, 2373, 2529, 2714
Zsp2I	ATGCAT	1 cut(s)	2820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.