Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0007191

Physical Location & Seq

Genomic Coordinates Forward (+)

21049890 .. 21053255

Gene Structure 3366 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017773

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGTCTCCTAATAACTGGAGATCATCCCTCTTCCTCCTCTTCCTGCTCCACTTCATCATATCATCATCATCATCAAATCCACACCCTCAGTTTCCATGCAACCAACCCCACCATAATACCCTGTACCCTTTTTGCAACACCTCTCTCTCCACCACCACCAGAGCCCAGTCCCTAATTTCCCTCCTCACCCTCAATGAGAAGATCCAACAGCTCTCCAACACTGCCTCTGGAATCCCCAGACTTGGAATCCCACCCTATGAGTGGTGGTCTGAGTCGCTTCATGGAATTGCCACAAATGGCCCTGGTGTCTCCTTCAATGGCACCATCCCTTCAGCCACAAGCTTCCCACAAGTGATTGTCACAGCAGCTGCTTTCAATAGGACTCTGTGGAACTTGATTGGCTCTGCCATTGCTGTTGAGGCTAGAGCTATGTACAACTTTGGCCAAGCTGGCTTGACATTTTGGGCACCCAATATTAATATCTTTAGGGACCCAAGATGGGGGAGAGGCCAAGAGACCCCTGGGGAGGACCCCATGGTTGCTTCTGCTTATGCTGTTGAGTTTGTGAAGGGATTTCAAGGTGGGAATTGGGGAGGTGGGAGTGGTATTGGAAATGGGTTTGGAGGGAAAAGAGTGTTGGAAGAGAGTGATGGGTTAATGCTTTCAGCTTGTTGCAAGCATTTCATTGCTTATGATTTGGAGATGTGGGGAAAGTATAGTAGATATAGCTTCAATGCAGTTGTTTCAGAACAAGATTTGGAGGACACATATCAGCCGCCTTTTCGTAGCTGCATACAGCAAGGCAAAGCGAGCTGCTTGATGTGTTCTTACAATGCAGTAAATGGGGTTCCAGCATGTGCAGACAAGGATTTGTTGGAGAAAGCTCGAGACAAATGGCGCTTCAAAGGGTATATCACCTCAGACTGTGATGCTGTGGCCACAGTTTTTGAATATCAGAATTATACAAAAACTGCTGAGGATGCAGTTGCTGATGTTCTTAAAGCAGGAACGGATATTGATTGTGGTACATTCTTGGTTCGAAATACTCTTTCTTCAATTAAACAAGGAAAGGTGCAAGAGGAAGACATAGATAGGGCTCTTCTTAATCTTTTCTCCGTTCAACTCCGTCTTGGGCTGTTTGATGGAGATCCCATAAAAGGGCAATTCGGAAGGTTGGGACCTCAAGACGTGTGTACATCAGAGCACAAAAATTTGGCACTTGAAGCAGCAAGGCAGGGAATTGTGCTTCTTAAAAATGATGAGAAGTTCCTGCCCCTGAAAAAGGGTGTTGATTTTTCGTTGGCTGTTATTGGTCCATTGGCGAACAATGCAAGTTTGCTGGGTGGGGGTTACACAGGGATTCCTTGCAACCCAAAGACTCCTTTTGAGGGTCTTCAGGAGTACAGAAAAAGAACATCTTACACAACTGGTTGCCTTGATGTACCATGTGTTTCTGATTCTGAGTTCAACGAAGCAATTCGCGCTGCCAAAAAAGCCGATTTTTCTGTTATAGTTGTTGGTCTTGATGCGTCACAAGAAAGAGAAGATCATGACCGAGTTAGTCTTCTCCTACCTGGTAAGCAGATGGCCCTTGTATCTTCAGTAGCTGCTGCAAGTAAAAACCCAGTGATTCTAGTTCTTGCTGGTGGTGGACCACTTGACGTATCATTCGCTGAAAAAGACCCGCGAATTGCTAGCATTCTTTGGATTGGGTACCCTGGTGAAATTGGTGGGAGGGCGCTGTCAGAAATCATCTTTGGAGACTTTAATCCAAGTGGAAGGCTGCCTATGACTTGGTATTTTGAGTCATTCACCAACATTCCAATGAATGATATGAACATGAGAGCTGATCCTTCTCGCGGTTATCCAGGAAGAACCTACCGGTTTTACACAGGGAATAGGGTGTATGGATTTGGACATGGCTTGAGCTACACAAATTTCACTTACAATATCGTGTCAGCACCAACCAAATTAAGCATACCAACACCTTTCAAGGTTGATTCAATCAAAAACATACTACACCAAACAGGAGATATAGTTGATTATTTACGCATAGATGAAGTGACATCTTGTGACTCCTTGAGATTTTCTGTCGAAATCAATGTGATGAATGTAGGAGACATGGATGGAAGCCATACTGTGATATTGTACTGTCGAGTGCCAGAAATTATGAAAGGTGCTCCAAAACAACAGCTGGTTGGATTTAATCAAGTGCATACTGTCTCATATAAATCTACATCAACAAGCATTTTGGTAGATCCTTGTACTCATCTTAGCTTTGCAAATGATTACGGCGAAAGGATACTGGCATTGGGTGATCATATGTTATTGGTTGGAGATGTAAAGCATTTTGTTTCTGTTGAAACAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009044 GO:0016020 GO:0016787 GO:0016798 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0097599 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

791

Amino Acids

86.61

Weight (kDa)

5.89

Isoelectric Point (pI)

30.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	110 - 368	4.1e-31	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	414 - 644	4.4e-48	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10560
fragaria_vesca	FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940
malus_domestica	MD01G1045300.v1.1
prunus_persica	Prupe.6G210000_v2.0.a1 Prupe.6G210000_v2.0.a1
pyrus_communis	pycom01g07120
rosa_chinensis	RchiOBHm_Chr2g0109951
rosa_laevigata	RLG00000017773
rosa_multiflora	Rmu_sc0005173.1_g000029 Rmu_sc0028281.1_g000001 Rmu_sc0033728.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133850
rosa_rugosa	Rorug02G0164200
rosa_samantha	Rh2AG216100 Rh2BG226200 Rh2CG218300 Rh2DG221700
rosa_wichuraiana	Rw2G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1713
AccB1I	GGYRCC	3 cut(s)	320, 466, 1713
AccII	CGCG	3 cut(s)	1482, 1687, 1860
AciI	CCGC	3 cut(s)	776, 1685, 1860
AclWI	GGATC	4 cut(s)	196, 1142, 1844, 2252
AcoI	YGGCCR	2 cut(s)	442, 936
AcsI	RAATTY	2 cut(s)	1210, 1936
AcuI	CTGAAG	3 cut(s)	315, 1379, 1584
AfaI	GTAC	9 cut(s)	125, 434, 1027, 1195, 1403, 1443, 1715, 2150, 2266
AflIII	ACRYGT	1 cut(s)	1188
AgeI	ACCGGT	1 cut(s)	1881
AjiI	CACGTC	1 cut(s)	1189
AjnI	CCWGG	5 cut(s)	301, 520, 1573, 1717, 1867
AjuI	GAANNNNNNNTTGG	4 cut(s)	620, 652, 1740, 1772
Alw21I	GWGCWC	2 cut(s)	1206, 2182
Alw26I	GTCTC	7 cut(s)	9, 313, 509, 882, 1755, 2112, 2227
AlwI	GGATC	4 cut(s)	196, 1142, 1844, 2252
AlwNI	CAGNNNCTG	3 cut(s)	368, 989, 1607
Ama87I	CYCGRG	1 cut(s)	885
AoxI	GGCC	5 cut(s)	298, 442, 508, 936, 1587
ApeKI	GCWGC	9 cut(s)	365, 368, 789, 813, 1226, 1484, 1607, 1610, 1783
ApoI	RAATTY	2 cut(s)	1210, 1936
ArsI	GACNNNNNNTTYG	2 cut(s)	1652, 1684
AseI	ATTAAT	1 cut(s)	477
AsiGI	ACCGGT	1 cut(s)	1881
Asp700I	GAANNNNTTC	1 cut(s)	1476
Asp718I	GGTACC	1 cut(s)	1713
AspLEI	GCGC	3 cut(s)	900, 1484, 1741
AspS9I	GGNCC	7 cut(s)	299, 490, 529, 1178, 1313, 1588, 1652
AsuHPI	GGTGA	5 cut(s)	178, 907, 1733, 1804, 2327
AsuII	TTCGAA	1 cut(s)	1039
AsuNHI	GCTAGC	1 cut(s)	1694
AvaI	CYCGRG	1 cut(s)	885
AvaII	GGWCC	5 cut(s)	490, 529, 1178, 1313, 1652
BaeGI	GKGCMC	1 cut(s)	469
BaeI	ACNNNNGTAYC	2 cut(s)	1705, 1738
BalI	TGGCCA	2 cut(s)	444, 938
BanI	GGYRCC	3 cut(s)	320, 466, 1713
BanII	GRGCYC	2 cut(s)	166, 1099
BbsI	GAAGAC	3 cut(s)	1089, 1385, 1556
Bbv12I	GWGCWC	2 cut(s)	1206, 2182
BbvCI	CCTCAGC	1 cut(s)	975
BbvI	GCAGC	9 cut(s)	355, 377, 776, 800, 1238, 1471, 1594, 1597, 1770
BccI	CCATC	6 cut(s)	332, 492, 644, 1136, 1579, 2120
BceAI	ACGGC	1 cut(s)	2308
BciT130I	CCWGG	5 cut(s)	303, 522, 1575, 1719, 1869
BciVI	GTATCC	1 cut(s)	2295
BclI	TGATCA	1 cut(s)	2317
BcoDI	GTCTC	7 cut(s)	9, 313, 509, 882, 1755, 2112, 2227
BfaI	CTAG	3 cut(s)	423, 1634, 1695
BfoI	RGCGCY	2 cut(s)	901, 1742
BfuI	GTATCC	1 cut(s)	2295
BglI	GCCNNNNNGGC	1 cut(s)	450
Bme1390I	CCNGG	5 cut(s)	303, 522, 1575, 1719, 1869
Bme18I	GGWCC	5 cut(s)	490, 529, 1178, 1313, 1652
BmeT110I	CYCGRG	1 cut(s)	885
BmgBI	CACGTC	1 cut(s)	1189
BmgT120I	GGNCC	7 cut(s)	299, 490, 529, 1178, 1313, 1588, 1652
BmiI	GGNNCC	8 cut(s)	322, 468, 491, 492, 531, 849, 1179, 1715
BmrFI	CCNGG	5 cut(s)	303, 522, 1575, 1719, 1869
BmrI	ACTGGG	2 cut(s)	160, 1619
BmsI	GCATC	3 cut(s)	919, 970, 1516
BmtI	GCTAGC	1 cut(s)	1698
BmuI	ACTGGG	2 cut(s)	160, 1619
BpiI	GAAGAC	3 cut(s)	1089, 1385, 1556
BpmI	CTGGAG	1 cut(s)	37
Bpu10I	CCTNAGC	1 cut(s)	975
Bpu14I	TTCGAA	1 cut(s)	1039
BpuEI	CTTGAG	3 cut(s)	1167, 1945, 2101
BsaBI	GATNNNNATC	1 cut(s)	1146
BsaI	GGTCTC	1 cut(s)	509
BsaJI	CCNNGG	5 cut(s)	301, 520, 521, 534, 1717
BsaWI	WCCGGW	1 cut(s)	1881
BsaXI	ACNNNNNCTCC	2 cut(s)	2022, 2052
Bse118I	RCCGGY	1 cut(s)	1881
Bse1I	ACTGG	5 cut(s)	20, 166, 1432, 1625, 2310
Bse3DI	GCAATG	2 cut(s)	408, 684
Bse8I	GATNNNNATC	1 cut(s)	1146
BseBI	CCWGG	5 cut(s)	303, 522, 1575, 1719, 1869
BseDI	CCNNGG	5 cut(s)	301, 520, 521, 534, 1717
BseGI	GGATG	4 cut(s)	23, 324, 985, 2131
BseJI	GATNNNNATC	1 cut(s)	1146
BseMI	GCAATG	2 cut(s)	408, 684
BseMII	CTCAG	5 cut(s)	101, 261, 933, 966, 1452
BseNI	ACTGG	5 cut(s)	20, 166, 1432, 1625, 2310
BseRI	GAGGAG	2 cut(s)	26, 173
BseSI	GKGCMC	1 cut(s)	469
BseXI	GCAGC	9 cut(s)	355, 377, 776, 800, 1238, 1471, 1594, 1597, 1770
BseYI	CCCAGC	1 cut(s)	1339
BsgI	GTGCAG	1 cut(s)	879
Bsh1236I	CGCG	3 cut(s)	1482, 1687, 1860
BshFI	GGCC	5 cut(s)	300, 444, 510, 938, 1589
BshNI	GGYRCC	3 cut(s)	320, 466, 1713
BshTI	ACCGGT	1 cut(s)	1881
BsiHKAI	GWGCWC	2 cut(s)	1206, 2182
BsiHKCI	CYCGRG	1 cut(s)	885
BsiSI	CCGG	1 cut(s)	1882
BslFI	GGGAC	3 cut(s)	154, 503, 1191
BsmAI	GTCTC	7 cut(s)	9, 313, 509, 882, 1755, 2112, 2227
BsmFI	GGGAC	3 cut(s)	154, 503, 1191
BsmI	GAATGC	1 cut(s)	1698
BsnI	GGCC	5 cut(s)	300, 444, 510, 938, 1589
Bso31I	GGTCTC	1 cut(s)	509
BsoBI	CYCGRG	1 cut(s)	885
Bsp119I	TTCGAA	1 cut(s)	1039
Bsp1286I	GDGCHC	5 cut(s)	166, 469, 1099, 1206, 2182
Bsp1407I	TGTACA	2 cut(s)	432, 1193
Bsp143I	GATC	7 cut(s)	20, 201, 1147, 1546, 1849, 2257, 2317
Bsp19I	CCATGG	1 cut(s)	534
BspACI	CCGC	3 cut(s)	776, 1685, 1860
BspANI	GGCC	5 cut(s)	300, 444, 510, 938, 1589
BspCNI	CTCAG	5 cut(s)	100, 262, 932, 967, 1453
BspFNI	CGCG	3 cut(s)	1482, 1687, 1860
BspHI	TCATGA	1 cut(s)	1549
BspLI	GGNNCC	8 cut(s)	322, 468, 491, 492, 531, 849, 1179, 1715
BspOI	GCTAGC	1 cut(s)	1698
BspPI	GGATC	4 cut(s)	196, 1142, 1844, 2252
BspQI	GCTCTTC	1 cut(s)	1104
BspT104I	TTCGAA	1 cut(s)	1039
BspT107I	GGYRCC	3 cut(s)	320, 466, 1713
BspTNI	GGTCTC	1 cut(s)	509
BsrDI	GCAATG	2 cut(s)	408, 684
BsrFI	RCCGGY	1 cut(s)	1881
BsrGI	TGTACA	2 cut(s)	432, 1193
BsrI	ACTGG	5 cut(s)	20, 166, 1432, 1625, 2310
BssAI	RCCGGY	1 cut(s)	1881
BssECI	CCNNGG	5 cut(s)	301, 520, 521, 534, 1717
BssMI	GATC	7 cut(s)	20, 201, 1147, 1546, 1849, 2257, 2317
BssT1I	CCWWGG	1 cut(s)	534
Bst2UI	CCWGG	5 cut(s)	303, 522, 1575, 1719, 1869
Bst4CI	ACNGT	5 cut(s)	926, 943, 2140, 2153, 2221
Bst6I	CTCTTC	4 cut(s)	35, 44, 636, 1104
BstAUI	TGTACA	2 cut(s)	432, 1193
BstBI	TTCGAA	1 cut(s)	1039
BstC8I	GCNNGC	4 cut(s)	451, 677, 811, 1696
BstDEI	CTNAG	6 cut(s)	87, 270, 919, 975, 1461, 2273
BstDSI	CCRYGG	1 cut(s)	534
BstENI	CCTNNNNNAGG	1 cut(s)	1280
BstF5I	GGATG	4 cut(s)	23, 324, 985, 2131
BstFNI	CGCG	3 cut(s)	1482, 1687, 1860
BstH2I	RGCGCY	2 cut(s)	901, 1742
BstHHI	GCGC	3 cut(s)	900, 1484, 1741
BstKTI	GATC	7 cut(s)	23, 204, 1150, 1549, 1852, 2260, 2320
BstMAI	GTCTC	7 cut(s)	9, 313, 509, 882, 1755, 2112, 2227
BstMBI	GATC	7 cut(s)	20, 201, 1147, 1546, 1849, 2257, 2317
BstMWI	GCNNNNNNNGC	8 cut(s)	419, 450, 810, 980, 1223, 1328, 1481, 1493
BstNI	CCWGG	5 cut(s)	303, 522, 1575, 1719, 1869
BstNSI	RCATGY	1 cut(s)	858
BstSCI	CCNGG	5 cut(s)	301, 520, 1573, 1717, 1867
BstSLI	GKGCMC	1 cut(s)	469
BstUI	CGCG	3 cut(s)	1482, 1687, 1860
BstV1I	GCAGC	9 cut(s)	355, 377, 776, 800, 1238, 1471, 1594, 1597, 1770
BstV2I	GAAGAC	3 cut(s)	1089, 1385, 1556
BstX2I	RGATCY	3 cut(s)	201, 1147, 2257
BstYI	RGATCY	3 cut(s)	201, 1147, 2257
BsuI	GTATCC	1 cut(s)	2295
BsuRI	GGCC	5 cut(s)	300, 444, 510, 938, 1589
BtgI	CCRYGG	1 cut(s)	534
BtrI	CACGTC	1 cut(s)	1189
BtsCI	GGATG	4 cut(s)	23, 324, 985, 2131
BtsI	GCAGTG	1 cut(s)	219
BtsIMutI	CAGTG	2 cut(s)	219, 1632
Cac8I	GCNNGC	4 cut(s)	451, 677, 811, 1696
CaiI	CAGNNNCTG	3 cut(s)	368, 989, 1607
CciI	TCATGA	1 cut(s)	1549
CfoI	GCGC	3 cut(s)	900, 1484, 1741
Cfr10I	RCCGGY	1 cut(s)	1881
Cfr13I	GGNCC	7 cut(s)	299, 490, 529, 1178, 1313, 1588, 1652
CseI	GACGC	1 cut(s)	1518
CsiI	ACCWGGT	1 cut(s)	1573
Csp6I	GTAC	9 cut(s)	124, 433, 1026, 1194, 1402, 1442, 1714, 2149, 2265
CspAI	ACCGGT	1 cut(s)	1881
CspCI	CAANNNNNGTGG	2 cut(s)	928, 963
CviAII	CATG	9 cut(s)	96, 281, 535, 855, 1446, 1550, 1840, 1919, 2122
CviQI	GTAC	9 cut(s)	124, 433, 1026, 1194, 1402, 1442, 1714, 2149, 2265
DdeI	CTNAG	6 cut(s)	87, 270, 919, 975, 1461, 2273
DpnI	GATC	7 cut(s)	22, 203, 1149, 1548, 1851, 2259, 2319
DpnII	GATC	7 cut(s)	20, 201, 1147, 1546, 1849, 2257, 2317
EaeI	YGGCCR	2 cut(s)	442, 936
Eam1104I	CTCTTC	4 cut(s)	35, 44, 636, 1104
EarI	CTCTTC	4 cut(s)	35, 44, 636, 1104
Eco130I	CCWWGG	1 cut(s)	534
Eco24I	GRGCYC	2 cut(s)	166, 1099
Eco31I	GGTCTC	1 cut(s)	509
Eco47I	GGWCC	5 cut(s)	490, 529, 1178, 1313, 1652
Eco57I	CTGAAG	3 cut(s)	315, 1379, 1584
Eco88I	CYCGRG	1 cut(s)	885
EcoNI	CCTNNNNNAGG	1 cut(s)	1280
EcoO109I	RGGNCCY	3 cut(s)	490, 529, 1178
EcoRII	CCWGG	5 cut(s)	301, 520, 1573, 1717, 1867
EcoT14I	CCWWGG	1 cut(s)	534
EcoT38I	GRGCYC	2 cut(s)	166, 1099
ErhI	CCWWGG	1 cut(s)	534
FaeI	CATG	9 cut(s)	99, 284, 538, 858, 1449, 1553, 1843, 1922, 2125
FalI	AAGNNNNNCTT	2 cut(s)	1402, 1434
FaqI	GGGAC	3 cut(s)	154, 503, 1191
FatI	CATG	9 cut(s)	95, 280, 534, 854, 1445, 1549, 1839, 1918, 2121
FauI	CCCGC	1 cut(s)	1692
FauNDI	CATATG	1 cut(s)	2322
FbaI	TGATCA	1 cut(s)	2317
FokI	GGATG	4 cut(s)	10, 311, 992, 2138
FriOI	GRGCYC	2 cut(s)	166, 1099
FspBI	CTAG	3 cut(s)	423, 1634, 1695
GlaI	GCGC	3 cut(s)	899, 1483, 1740
GsaI	CCCAGC	1 cut(s)	1343
GsuI	CTGGAG	1 cut(s)	37
HaeII	RGCGCY	2 cut(s)	901, 1742
HaeIII	GGCC	5 cut(s)	300, 444, 510, 938, 1589
HapII	CCGG	1 cut(s)	1882
HgaI	GACGC	1 cut(s)	1518
HhaI	GCGC	3 cut(s)	900, 1484, 1741
Hin1II	CATG	9 cut(s)	99, 284, 538, 858, 1449, 1553, 1843, 1922, 2125
Hin6I	GCGC	3 cut(s)	898, 1482, 1739
HinP1I	GCGC	3 cut(s)	898, 1482, 1739
HindIII	AAGCTT	1 cut(s)	340
HpaII	CCGG	1 cut(s)	1882
HphI	GGTGA	5 cut(s)	178, 907, 1733, 1804, 2327
Hpy166II	GTNNAC	2 cut(s)	1194, 1652
Hpy188I	TCNGA	9 cut(s)	271, 748, 922, 957, 1169, 1201, 1456, 1462, 1747
Hpy188III	TCNNGA	6 cut(s)	228, 887, 1184, 1397, 1523, 1550
Hpy8I	GTNNAC	2 cut(s)	1194, 1652
HpyAV	CCTTC	6 cut(s)	322, 339, 562, 1164, 1773, 1863
HpyCH4III	ACNGT	5 cut(s)	926, 943, 2140, 2153, 2221
HpyCH4IV	ACGT	2 cut(s)	1188, 1662
HpyF10VI	GCNNNNNNNGC	8 cut(s)	419, 450, 810, 980, 1223, 1328, 1481, 1493
HpyF3I	CTNAG	6 cut(s)	87, 270, 919, 975, 1461, 2273
HpySE526I	ACGT	2 cut(s)	1188, 1662
Hsp92II	CATG	9 cut(s)	99, 284, 538, 858, 1449, 1553, 1843, 1922, 2125
HspAI	GCGC	3 cut(s)	898, 1482, 1739
KflI	GGGWCCC	1 cut(s)	490
KpnI	GGTACC	1 cut(s)	1717
Ksp22I	TGATCA	1 cut(s)	2317
Kzo9I	GATC	7 cut(s)	20, 201, 1147, 1546, 1849, 2257, 2317
LguI	GCTCTTC	1 cut(s)	1104
LmnI	GCTCC	2 cut(s)	51, 2185
Lsp1109I	GCAGC	9 cut(s)	355, 377, 776, 800, 1238, 1471, 1594, 1597, 1770
LweI	GCATC	3 cut(s)	919, 970, 1516
MabI	ACCWGGT	1 cut(s)	1573
MaeI	CTAG	3 cut(s)	423, 1634, 1695
MaeII	ACGT	2 cut(s)	1188, 1662
MaeIII	GTNAC	5 cut(s)	358, 1349, 1530, 2062, 2072
MalI	GATC	7 cut(s)	22, 203, 1149, 1548, 1851, 2259, 2319
MboI	GATC	7 cut(s)	20, 201, 1147, 1546, 1849, 2257, 2317
MflI	RGATCY	3 cut(s)	201, 1147, 2257
MhlI	GDGCHC	5 cut(s)	166, 469, 1099, 1206, 2182
MlsI	TGGCCA	2 cut(s)	444, 938
MluNI	TGGCCA	2 cut(s)	444, 938
MlyI	GAGTC	5 cut(s)	281, 376, 1372, 1814, 2069
MmeI	TCCRAC	6 cut(s)	229, 240, 618, 855, 2179, 2314
Mox20I	TGGCCA	2 cut(s)	444, 938
MroXI	GAANNNNTTC	1 cut(s)	1476
MscI	TGGCCA	2 cut(s)	444, 938
MseI	TTAA	9 cut(s)	477, 656, 999, 1059, 1104, 1251, 1767, 1973, 2205
MslI	CAYNNNNRTG	1 cut(s)	1823
Msp20I	TGGCCA	2 cut(s)	444, 938
MspA1I	CMGCKG	2 cut(s)	368, 2194
MspI	CCGG	1 cut(s)	1882
MspR9I	CCNGG	5 cut(s)	303, 522, 1575, 1719, 1869
Mva1269I	GAATGC	1 cut(s)	1698
MvaI	CCWGG	5 cut(s)	303, 522, 1575, 1719, 1869
MvnI	CGCG	3 cut(s)	1482, 1687, 1860
MwoI	GCNNNNNNNGC	8 cut(s)	419, 450, 810, 980, 1223, 1328, 1481, 1493
NcoI	CCATGG	1 cut(s)	534
NdeI	CATATG	1 cut(s)	2322
NdeII	GATC	7 cut(s)	20, 201, 1147, 1546, 1849, 2257, 2317
NheI	GCTAGC	1 cut(s)	1694
NlaIII	CATG	9 cut(s)	99, 284, 538, 858, 1449, 1553, 1843, 1922, 2125
NlaIV	GGNNCC	8 cut(s)	322, 468, 491, 492, 531, 849, 1179, 1715
NmuCI	GTSAC	4 cut(s)	358, 1530, 2062, 2072
NspI	RCATGY	1 cut(s)	858
NspV	TTCGAA	1 cut(s)	1039
PaeR7I	CTCGAG	1 cut(s)	885
PagI	TCATGA	1 cut(s)	1549
PasI	CCCWGGG	1 cut(s)	521
PciSI	GCTCTTC	1 cut(s)	1104
PctI	GAATGC	1 cut(s)	1698
PdmI	GAANNNNTTC	1 cut(s)	1476
PfeI	GAWTC	6 cut(s)	231, 246, 1360, 1457, 1630, 2000
PfoI	TCCNGGA	1 cut(s)	1867
PinAI	ACCGGT	1 cut(s)	1881
PleI	GAGTC	5 cut(s)	280, 376, 1372, 1813, 2069
PpsI	GAGTC	5 cut(s)	280, 376, 1372, 1813, 2069
PpuMI	RGGWCCY	3 cut(s)	490, 529, 1178
PshBI	ATTAAT	1 cut(s)	477
Psp5II	RGGWCCY	3 cut(s)	490, 529, 1178
Psp6I	CCWGG	5 cut(s)	301, 520, 1573, 1717, 1867
PspFI	CCCAGC	1 cut(s)	1339
PspGI	CCWGG	5 cut(s)	301, 520, 1573, 1717, 1867
PspN4I	GGNNCC	8 cut(s)	322, 468, 491, 492, 531, 849, 1179, 1715
PspPI	GGNCC	7 cut(s)	299, 490, 529, 1178, 1313, 1588, 1652
PspPPI	RGGWCCY	3 cut(s)	490, 529, 1178
PsrI	GAACNNNNNNTAC	2 cut(s)	831, 863
PstNI	CAGNNNCTG	3 cut(s)	368, 989, 1607
PsuI	RGATCY	3 cut(s)	201, 1147, 2257
PvuII	CAGCTG	2 cut(s)	368, 2194
RsaI	GTAC	9 cut(s)	125, 434, 1027, 1195, 1403, 1443, 1715, 2150, 2266
RsaNI	GTAC	9 cut(s)	124, 433, 1026, 1194, 1402, 1442, 1714, 2149, 2265
RseI	CAYNNNNRTG	1 cut(s)	1823
SapI	GCTCTTC	1 cut(s)	1104
SaqAI	TTAA	9 cut(s)	477, 656, 999, 1059, 1104, 1251, 1767, 1973, 2205
Sau3AI	GATC	7 cut(s)	20, 201, 1147, 1546, 1849, 2257, 2317
Sau96I	GGNCC	7 cut(s)	299, 490, 529, 1178, 1313, 1588, 1652
SchI	GAGTC	5 cut(s)	281, 376, 1372, 1814, 2069
ScrFI	CCNGG	5 cut(s)	303, 522, 1575, 1719, 1869
SduI	GDGCHC	5 cut(s)	166, 469, 1099, 1206, 2182
SexAI	ACCWGGT	1 cut(s)	1573
SfaNI	GCATC	3 cut(s)	919, 970, 1516
Sfr274I	CTCGAG	1 cut(s)	885
SfuI	TTCGAA	1 cut(s)	1039
SinI	GGWCC	5 cut(s)	490, 529, 1178, 1313, 1652
SlaI	CTCGAG	1 cut(s)	885
SmiMI	CAYNNNNRTG	1 cut(s)	1823
SmlI	CTYRAG	4 cut(s)	885, 1182, 1924, 2080
SmoI	CTYRAG	4 cut(s)	885, 1182, 1924, 2080
SsiI	CCGC	3 cut(s)	776, 1685, 1860
SspI	AATATT	1 cut(s)	475
SspMI	CTAG	3 cut(s)	423, 1634, 1695
StyD4I	CCNGG	5 cut(s)	301, 520, 1573, 1717, 1867
StyI	CCWWGG	1 cut(s)	534
TaaI	ACNGT	5 cut(s)	926, 943, 2140, 2153, 2221
TaiI	ACGT	2 cut(s)	1191, 1665
TaqI	TCGA	4 cut(s)	886, 1039, 2094, 2155
TaqII	GACCGA	1 cut(s)	1569
TatI	WGTACW	5 cut(s)	432, 1193, 1401, 2148, 2264
TauI	GCSGC	1 cut(s)	778
TfiI	GAWTC	6 cut(s)	231, 246, 1360, 1457, 1630, 2000
Tru1I	TTAA	9 cut(s)	477, 656, 999, 1059, 1104, 1251, 1767, 1973, 2205
Tru9I	TTAA	9 cut(s)	477, 656, 999, 1059, 1104, 1251, 1767, 1973, 2205
TscAI	CASTG	2 cut(s)	226, 1632
TseFI	GTSAC	4 cut(s)	358, 1530, 2062, 2072
TseI	GCWGC	9 cut(s)	365, 368, 789, 813, 1226, 1484, 1607, 1610, 1783
Tsp45I	GTSAC	4 cut(s)	358, 1530, 2062, 2072
TspDTI	ATGAA	8 cut(s)	43, 269, 673, 1841, 1850, 2073, 2123, 2186
TspGWI	ACGGA	3 cut(s)	1025, 1105, 1115
TspRI	CASTG	2 cut(s)	226, 1632
VpaK11BI	GGWCC	5 cut(s)	490, 529, 1178, 1313, 1652
VspI	ATTAAT	1 cut(s)	477
XagI	CCTNNNNNAGG	1 cut(s)	1280
XapI	RAATTY	2 cut(s)	1210, 1936
XceI	RCATGY	1 cut(s)	858
XcmI	CCANNNNNNNNNTGG	2 cut(s)	258, 518
XhoI	CTCGAG	1 cut(s)	885
XmnI	GAANNNNTTC	1 cut(s)	1476
XspI	CTAG	3 cut(s)	423, 1634, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.