Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0007191

Physical Location & Seq

Genomic Coordinates Reverse (-)

21843437 .. 21847407

Gene Structure 3971 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G210000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

ATGCTGACTTTGAGAACTCAAAACACTTCTCTGAACTCAATGTCTCCTAACTGGAAATCCCTCTTCTTCCTCCTCCTTCTACAACTCTTCAAATTATGCTTCAGCAAATCCCAGCCATTCACATCATCATCATCAAATTCAGACCTTCAATTCCCATGCAAGCCACCCCACCACAGCTCCTATCCTTTTTGCAACACCTCCCTCCCAATCACAACCAGAGCTCAGTCCCTAATTTCCCTCCTTACCCTCCGAGAAAAAATCCAACAGCTCTCAAACAATGCCTCTGCAATTCCAAGACTTGGCATCCCACCCTATGAATGGTGGTCTGAGTCACTCCATGGCATAGCCACCAATGGCCCTGGTGTCTCCTTCAATGGCACCATCCCTTCAGCCACAAGCTTCCCACAAGTGATTGTCACTGCAGCTGCTTTCAATAGGACTCTCTGGTCCTTAATTGGGTCTGCCATAGCTGTTGAGGCTAGATCAATGTACAATTTGGGGCAAGCTGGGCTGACATTTTGGGCACCCAATATCAATATCTTCAGGGACCCAAGATGGGGCAGAGGTCAAGAGACCCCTGGGGAGGACCCCATGGTTGCTTCTGCTTATGCAATTGAGTTTGTGAACGGTTTCCAAGGTGGGAATTGGGGAATTACACATGATGGGTTTGGAGAGAGGAGAGTTTTGGAAGGTCATGATGGTGGGAGTGATGATGGTCTAATGCTCTCTGCTTGTTGCAAGCATTTCACTGCTTATGATTTGGAGTTGTGGGGGAATTTCAGTAGATATAGCTTCAATGCTGTGGTTTCAGAACAAGATTTGGAGGATACGTATCAGCCACCTTTTCGTAGTTGTATACAACAAGGTAAAGCTAGCTGCTTAATGTGTTCTTACAATGCAGTAAATGGGGTTCCTGCTTGTGCACAGAAGGATCTCTTGGACAAAGCTCGGAATGAGTGGGGCTTCAAAGGATATATCACCTCAGACTGCGATGCTGTGGCCACTGTCTATGAGTATCAGAATTACACAACAAGCTCTGAAGATGCAGTTGCTGATGTTCTTAAAGCAGGGATGGATATTAATTGTGGTACATTCTTGCTTCGACATACTCTATCGACGATCAAAAAAGGGAAGGTGCAAGAGGAAGACATAGACAAGGCTCTTCTCAATCTTTTCTCAGTTCAACTCCGCCTTGGGCTGTTTGATGGGGATCCCAGAAATGGGCAATTTGGTAGTTTGGGACCTAAGGACGTCTGTACATCAGAGCACAAGGCTTTGGCACTTGAGGCCACAAGGCAGGGAATTGTGCTTCTTAAAAATGATAAGAAGTTTTTGCCTTTAGAAAAGGGTGTTGATTTTTCCTTGGCTGTTATTGGTCCATTGGCAAACAATGCAAGTTTGCTGGGTGGGGGTTACACAGGGATTCCCTGCAGCTCAAAGGGTCTCTTTGAGGGTCTTCAAGAGTACACAAAAAGAGCATTGTATGCAGCTGGTTGCCTTGATGTACCATGTAAGTCTCGTGCTGGGTTCCGAGAAGCAATTCATACTGTCAAGATGGCTGATTTTGTTGTTATAGTTGTTGGTCTTGATTTGACGCAAGAAAGAGAAGATCATGACCGAGTTAGTCTTCTCTTACCTGGTAAACAAATGGCCCTTGTATCTTCTGTGGCAGCTGCAAGTAAAGAACCAGTGATTCTGGTACTTACTGGTGGTGGACCACTTGATGTAACATTTGCCAAAGAAGACCCGCGAATCGCAAGCATTCTTTGGATTGGGTACCCTGGGGAATCTGGCGGGAGAGCACTAGCAGAAGTCCTCTTTGGAGATTTCAATCCGGGTGGAAGGCTACCTATGACTTGGTATCCTGAGTCATTCACCAATATACCGATGAATGATATGAACATGAGGGCCGATCCTTCTCAAGGTTATCCGGGAAGAACCTACCGATTTTACACAGGGAGCAGGCTGTATGGATTTGGAGATGGCTTAAGCTACAGTAAGTTCACTTACAACATCGTATCAGCGCCAAAAAAGTTAAGGTTATCAAGACCTCTCAAGGTTGATTCCAGCAGAAACGTACTACACCAAGCAGGAGATACACTTGATTATTTACACATTGATGAGGTGATATCTTGTGATTCCTTGAGATTTTTTGTTGAAATCACTGTGACGAATATAGGAGACATGGATGGAGGCCATACTGTGATGTTGTTCTCCAGAATGACAAAAGTTGTCAAGGGTGCTCCAAAACAACAGCTGATTGGATTTAACCGTGTGCATACTGGTTCGTACAAATCTACTGCAACAAGCATTCTAGTTGATCCTTGCACACATTTTAGCTTTGCAAATGATTATGGGGAATGGATATTGCCACTGGGTGATCATAGGTTAATGGTAGGAGATATAGAACACACTGTCTCAATTGAAATTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009044 GO:0016020 GO:0016787 GO:0016798 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0097599 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

812

Amino Acids

88.98

Weight (kDa)

6.13

Isoelectric Point (pI)

36.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10560
fragaria_vesca	FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940
malus_domestica	MD01G1045300.v1.1
prunus_persica	Prupe.6G210000_v2.0.a1 Prupe.6G210000_v2.0.a1
pyrus_communis	pycom01g07120
rosa_chinensis	RchiOBHm_Chr2g0109951
rosa_laevigata	RLG00000017773
rosa_multiflora	Rmu_sc0005173.1_g000029 Rmu_sc0028281.1_g000001 Rmu_sc0033728.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133850
rosa_rugosa	Rorug02G0164200
rosa_samantha	Rh2AG216100 Rh2BG226200 Rh2CG218300 Rh2DG221700
rosa_wichuraiana	Rw2G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	445
AatII	GACGTC	1 cut(s)	1254
Acc65I	GGTACC	1 cut(s)	1776
AccB1I	GGYRCC	3 cut(s)	377, 523, 1776
AccB7I	CCANNNNNTGG	1 cut(s)	299
AccI	GTMKAC	1 cut(s)	856
AccII	CGCG	1 cut(s)	1750
AciI	CCGC	3 cut(s)	1189, 1748, 1794
AclWI	GGATC	5 cut(s)	939, 1205, 1218, 1907, 2315
AcoI	YGGCCR	1 cut(s)	999
AcsI	RAATTY	2 cut(s)	136, 775
AcuI	CTGAAG	4 cut(s)	85, 372, 526, 1059
AcyI	GRCGYC	1 cut(s)	1251
AdeI	CACNNNGTG	1 cut(s)	2378
AfaI	GTAC	9 cut(s)	491, 1090, 1258, 1466, 1506, 1701, 1778, 2079, 2291
AfiI	CCNNNNNNNGG	9 cut(s)	299, 318, 456, 556, 557, 583, 1220, 1221, 1922
AflII	CTTAAG	1 cut(s)	1987
AjnI	CCWGG	4 cut(s)	358, 577, 1636, 1780
AjuI	GAANNNNNNNTTGG	4 cut(s)	920, 952, 1803, 1835
Alw21I	GWGCWC	5 cut(s)	223, 925, 1269, 1804, 2245
Alw26I	GTCTC	7 cut(s)	48, 370, 566, 1448, 1521, 2175, 2422
Alw44I	GTGCAC	1 cut(s)	921
AlwI	GGATC	5 cut(s)	939, 1205, 1218, 1907, 2315
AlwNI	CAGNNNCTG	1 cut(s)	1052
AoxI	GGCC	6 cut(s)	355, 999, 1287, 1650, 1908, 2194
ApaLI	GTGCAC	1 cut(s)	921
ApeKI	GCWGC	7 cut(s)	422, 425, 876, 1431, 1487, 1670, 1673
ApoI	RAATTY	2 cut(s)	136, 775
AseI	ATTAAT	2 cut(s)	1080, 2430
Asp700I	GAANNNNTTC	2 cut(s)	629, 1539
Asp718I	GGTACC	1 cut(s)	1776
AspLEI	GCGC	1 cut(s)	2026
AspS9I	GGNCC	9 cut(s)	356, 447, 547, 586, 1241, 1376, 1651, 1715, 1908
AsuC2I	CCSGG	2 cut(s)	1836, 1932
AsuHPI	GGTGA	4 cut(s)	970, 1867, 2137, 2390
AsuNHI	GCTAGC	1 cut(s)	872
AvaII	GGWCC	6 cut(s)	447, 547, 586, 1241, 1376, 1715
AxyI	CCTNAGG	1 cut(s)	1245
BaeGI	GKGCMC	2 cut(s)	526, 925
BalI	TGGCCA	1 cut(s)	1001
BamHI	GGATCC	1 cut(s)	1210
BanI	GGYRCC	3 cut(s)	377, 523, 1776
BanII	GRGCYC	1 cut(s)	223
BauI	CACGAG	1 cut(s)	1518
BbsI	GAAGAC	4 cut(s)	1152, 1448, 1619, 1749
Bbv12I	GWGCWC	5 cut(s)	223, 925, 1269, 1804, 2245
BbvI	GCAGC	7 cut(s)	412, 434, 863, 1443, 1499, 1660, 1682
BciT130I	CCWGG	4 cut(s)	360, 579, 1638, 1782
BciVI	GTATCC	2 cut(s)	820, 1872
BclI	TGATCA	1 cut(s)	2380
BcnI	CCSGG	2 cut(s)	1836, 1932
BcoDI	GTCTC	7 cut(s)	48, 370, 566, 1448, 1521, 2175, 2422
BfaI	CTAG	4 cut(s)	480, 873, 1805, 2315
BfmI	CTRYAG	3 cut(s)	420, 1429, 1993
BfoI	RGCGCY	1 cut(s)	2027
BfrI	CTTAAG	1 cut(s)	1987
BfuI	GTATCC	2 cut(s)	820, 1872
BisI	GCNGC	7 cut(s)	423, 426, 877, 1432, 1488, 1671, 1674
BlsI	GCNGC	7 cut(s)	424, 427, 878, 1433, 1489, 1672, 1675
Bme1390I	CCNGG	6 cut(s)	360, 579, 1638, 1782, 1836, 1932
Bme18I	GGWCC	6 cut(s)	447, 547, 586, 1241, 1376, 1715
BmgT120I	GGNCC	9 cut(s)	356, 447, 547, 586, 1241, 1376, 1651, 1715, 1908
BmrFI	CCNGG	6 cut(s)	360, 579, 1638, 1782, 1836, 1932
BmrI	ACTGGG	1 cut(s)	2384
BmsI	GCATC	3 cut(s)	312, 982, 1033
BmtI	GCTAGC	1 cut(s)	876
BmuI	ACTGGG	1 cut(s)	2384
BpiI	GAAGAC	4 cut(s)	1152, 1448, 1619, 1749
BpmI	CTGGAG	1 cut(s)	2200
BpuEI	CTTGAG	4 cut(s)	1304, 1905, 2039, 2164
BpuMI	CCSGG	2 cut(s)	1836, 1932
BsaAI	YACGTR	1 cut(s)	831
BsaBI	GATNNNNATC	3 cut(s)	831, 1209, 1830
BsaHI	GRCGYC	1 cut(s)	1251
BsaI	GGTCTC	2 cut(s)	566, 1448
BsaXI	ACNNNNNCTCC	4 cut(s)	161, 191, 815, 845
Bsc4I	CCNNNNNNNGG	9 cut(s)	299, 318, 456, 556, 557, 583, 1220, 1221, 1922
Bse1I	ACTGG	5 cut(s)	56, 1688, 1711, 2287, 2379
Bse21I	CCTNAGG	1 cut(s)	1245
Bse8I	GATNNNNATC	3 cut(s)	831, 1209, 1830
BseBI	CCWGG	4 cut(s)	360, 579, 1638, 1782
BseGI	GGATG	4 cut(s)	303, 381, 1077, 2194
BseJI	GATNNNNATC	3 cut(s)	831, 1209, 1830
BseLI	CCNNNNNNNGG	9 cut(s)	299, 318, 456, 556, 557, 583, 1220, 1221, 1922
BseMII	CTCAG	5 cut(s)	236, 318, 996, 1191, 1857
BseNI	ACTGG	5 cut(s)	56, 1688, 1711, 2287, 2379
BseRI	GAGGAG	2 cut(s)	62, 691
BseSI	GKGCMC	2 cut(s)	526, 925
BseXI	GCAGC	7 cut(s)	412, 434, 863, 1443, 1499, 1660, 1682
BseYI	CCCAGC	4 cut(s)	111, 506, 1402, 1523
Bsh1236I	CGCG	1 cut(s)	1750
BshFI	GGCC	6 cut(s)	357, 1001, 1289, 1652, 1910, 2196
BshNI	GGYRCC	3 cut(s)	377, 523, 1776
BsiHKAI	GWGCWC	5 cut(s)	223, 925, 1269, 1804, 2245
BsiSI	CCGG	2 cut(s)	1835, 1931
BslFI	GGGAC	3 cut(s)	211, 560, 1254
BslI	CCNNNNNNNGG	9 cut(s)	299, 318, 456, 556, 557, 583, 1220, 1221, 1922
BsmAI	GTCTC	7 cut(s)	48, 370, 566, 1448, 1521, 2175, 2422
BsmFI	GGGAC	3 cut(s)	211, 560, 1254
BsmI	GAATGC	2 cut(s)	1761, 2310
BsnI	GGCC	6 cut(s)	357, 1001, 1289, 1652, 1910, 2196
Bso31I	GGTCTC	2 cut(s)	566, 1448
Bsp1286I	GDGCHC	6 cut(s)	223, 526, 925, 1269, 1804, 2245
Bsp1407I	TGTACA	2 cut(s)	489, 1256
Bsp143I	GATC	8 cut(s)	482, 931, 1119, 1210, 1609, 1912, 2320, 2380
Bsp19I	CCATGG	2 cut(s)	337, 591
BspACI	CCGC	3 cut(s)	1189, 1748, 1794
BspANI	GGCC	6 cut(s)	357, 1001, 1289, 1652, 1910, 2196
BspCNI	CTCAG	5 cut(s)	235, 319, 995, 1190, 1858
BspFNI	CGCG	1 cut(s)	1750
BspHI	TCATGA	2 cut(s)	694, 1612
BspMAI	CTGCAG	2 cut(s)	424, 1433
BspOI	GCTAGC	1 cut(s)	876
BspPI	GGATC	5 cut(s)	939, 1205, 1218, 1907, 2315
BspQI	GCTCTTC	1 cut(s)	1167
BspT107I	GGYRCC	3 cut(s)	377, 523, 1776
BspTI	CTTAAG	1 cut(s)	1987
BspTNI	GGTCTC	2 cut(s)	566, 1448
BsrGI	TGTACA	2 cut(s)	489, 1256
BsrI	ACTGG	5 cut(s)	56, 1688, 1711, 2287, 2379
BssMI	GATC	8 cut(s)	482, 931, 1119, 1210, 1609, 1912, 2320, 2380
BssNAI	GTATAC	1 cut(s)	857
BssNI	GRCGYC	1 cut(s)	1251
BssSI	CACGAG	1 cut(s)	1518
BssT1I	CCWWGG	5 cut(s)	337, 591, 634, 1192, 1362
Bst1107I	GTATAC	1 cut(s)	857
Bst2BI	CACGAG	1 cut(s)	1518
Bst2UI	CCWGG	4 cut(s)	360, 579, 1638, 1782
Bst4CI	ACNGT	8 cut(s)	629, 1006, 1549, 1997, 2167, 2203, 2273, 2416
Bst6I	CTCTTC	3 cut(s)	68, 92, 1167
BstACI	GRCGYC	1 cut(s)	1251
BstAFI	CTTAAG	1 cut(s)	1987
BstAPI	GCANNNNNTGC	2 cut(s)	1391, 1484
BstAUI	TGTACA	2 cut(s)	489, 1256
BstBAI	YACGTR	1 cut(s)	831
BstC8I	GCNNGC	6 cut(s)	161, 504, 740, 874, 1759, 1964
BstDEI	CTNAG	6 cut(s)	222, 327, 982, 1177, 1245, 1866
BstDSI	CCRYGG	2 cut(s)	337, 591
BstENI	CCTNNNNNAGG	1 cut(s)	1920
BstF5I	GGATG	4 cut(s)	303, 381, 1077, 2194
BstFNI	CGCG	1 cut(s)	1750
BstH2I	RGCGCY	1 cut(s)	2027
BstHHI	GCGC	1 cut(s)	2026
BstKTI	GATC	8 cut(s)	485, 934, 1122, 1213, 1612, 1915, 2323, 2383
BstMAI	GTCTC	7 cut(s)	48, 370, 566, 1448, 1521, 2175, 2422
BstMBI	GATC	8 cut(s)	482, 931, 1119, 1210, 1609, 1912, 2320, 2380
BstMWI	GCNNNNNNNGC	5 cut(s)	476, 508, 1286, 1391, 1484
BstNI	CCWGG	4 cut(s)	360, 579, 1638, 1782
BstSCI	CCNGG	6 cut(s)	358, 577, 1636, 1780, 1834, 1930
BstSFI	CTRYAG	3 cut(s)	420, 1429, 1993
BstSLI	GKGCMC	2 cut(s)	526, 925
BstSNI	TACGTA	1 cut(s)	831
BstUI	CGCG	1 cut(s)	1750
BstV1I	GCAGC	7 cut(s)	412, 434, 863, 1443, 1499, 1660, 1682
BstV2I	GAAGAC	4 cut(s)	1152, 1448, 1619, 1749
BstX2I	RGATCY	2 cut(s)	931, 1210
BstYI	RGATCY	2 cut(s)	931, 1210
BstZ17I	GTATAC	1 cut(s)	857
Bsu36I	CCTNAGG	1 cut(s)	1245
BsuI	GTATCC	2 cut(s)	820, 1872
BsuRI	GGCC	6 cut(s)	357, 1001, 1289, 1652, 1910, 2196
BtgI	CCRYGG	2 cut(s)	337, 591
BtgZI	GCGATG	1 cut(s)	1005
BtsCI	GGATG	4 cut(s)	303, 381, 1077, 2194
BtsI	GCAGTG	2 cut(s)	417, 747
BtsIMutI	CAGTG	7 cut(s)	417, 747, 1002, 1695, 2163, 2372, 2412
Cac8I	GCNNGC	6 cut(s)	161, 504, 740, 874, 1759, 1964
CaiI	CAGNNNCTG	1 cut(s)	1052
CciI	TCATGA	2 cut(s)	694, 1612
CfoI	GCGC	1 cut(s)	2026
Cfr13I	GGNCC	9 cut(s)	356, 447, 547, 586, 1241, 1376, 1651, 1715, 1908
CseI	GACGC	1 cut(s)	1603
CsiI	ACCWGGT	1 cut(s)	1636
Csp6I	GTAC	9 cut(s)	490, 1089, 1257, 1465, 1505, 1700, 1777, 2078, 2290
CspCI	CAANNNNNGTGG	2 cut(s)	1819, 1854
CviAII	CATG	9 cut(s)	156, 338, 592, 659, 695, 1509, 1613, 1903, 2185
CviQI	GTAC	9 cut(s)	490, 1089, 1257, 1465, 1505, 1700, 1777, 2078, 2290
DdeI	CTNAG	6 cut(s)	222, 327, 982, 1177, 1245, 1866
DpnI	GATC	8 cut(s)	484, 933, 1121, 1212, 1611, 1914, 2322, 2382
DpnII	GATC	8 cut(s)	482, 931, 1119, 1210, 1609, 1912, 2320, 2380
DraIII	CACNNNGTG	1 cut(s)	2378
DrdI	GACNNNNNNGTC	1 cut(s)	445
DseDI	GACNNNNNNGTC	1 cut(s)	445
EaeI	YGGCCR	1 cut(s)	999
Eam1104I	CTCTTC	3 cut(s)	68, 92, 1167
EarI	CTCTTC	3 cut(s)	68, 92, 1167
EciI	GGCGGA	1 cut(s)	1178
Ecl136II	GAGCTC	1 cut(s)	221
Eco105I	TACGTA	1 cut(s)	831
Eco130I	CCWWGG	5 cut(s)	337, 591, 634, 1192, 1362
Eco24I	GRGCYC	1 cut(s)	223
Eco31I	GGTCTC	2 cut(s)	566, 1448
Eco32I	GATATC	1 cut(s)	2130
Eco47I	GGWCC	6 cut(s)	447, 547, 586, 1241, 1376, 1715
Eco53kI	GAGCTC	1 cut(s)	221
Eco57I	CTGAAG	4 cut(s)	85, 372, 526, 1059
Eco81I	CCTNAGG	1 cut(s)	1245
EcoICRI	GAGCTC	1 cut(s)	221
EcoNI	CCTNNNNNAGG	1 cut(s)	1920
EcoO109I	RGGNCCY	3 cut(s)	547, 586, 1241
EcoRII	CCWGG	4 cut(s)	358, 577, 1636, 1780
EcoRV	GATATC	1 cut(s)	2130
EcoT14I	CCWWGG	5 cut(s)	337, 591, 634, 1192, 1362
EcoT38I	GRGCYC	1 cut(s)	223
ErhI	CCWWGG	5 cut(s)	337, 591, 634, 1192, 1362
FaeI	CATG	9 cut(s)	159, 341, 595, 662, 698, 1512, 1616, 1906, 2188
FalI	AAGNNNNNCTT	4 cut(s)	920, 952, 1430, 1462
FaqI	GGGAC	3 cut(s)	211, 560, 1254
FatI	CATG	9 cut(s)	155, 337, 591, 658, 694, 1508, 1612, 1902, 2184
FauI	CCCGC	2 cut(s)	1755, 1787
FbaI	TGATCA	1 cut(s)	2380
FblI	GTMKAC	1 cut(s)	856
Fnu4HI	GCNGC	7 cut(s)	423, 426, 877, 1432, 1488, 1671, 1674
FokI	GGATG	4 cut(s)	290, 368, 1084, 2201
FriOI	GRGCYC	1 cut(s)	223
Fsp4HI	GCNGC	7 cut(s)	423, 426, 877, 1432, 1488, 1671, 1674
FspBI	CTAG	4 cut(s)	480, 873, 1805, 2315
GlaI	GCGC	1 cut(s)	2025
GluI	GCNGC	7 cut(s)	423, 426, 877, 1432, 1488, 1671, 1674
GsaI	CCCAGC	4 cut(s)	115, 510, 1406, 1527
GsuI	CTGGAG	1 cut(s)	2200
HaeII	RGCGCY	1 cut(s)	2027
HaeIII	GGCC	6 cut(s)	357, 1001, 1289, 1652, 1910, 2196
HapII	CCGG	2 cut(s)	1835, 1931
HgaI	GACGC	1 cut(s)	1603
HhaI	GCGC	1 cut(s)	2026
Hin1I	GRCGYC	1 cut(s)	1251
Hin1II	CATG	9 cut(s)	159, 341, 595, 662, 698, 1512, 1616, 1906, 2188
Hin6I	GCGC	1 cut(s)	2024
HinP1I	GCGC	1 cut(s)	2024
HindIII	AAGCTT	1 cut(s)	397
HinfI	GANTC	9 cut(s)	329, 439, 1423, 1693, 1752, 1787, 1868, 2063, 2138
HpaII	CCGG	2 cut(s)	1835, 1931
HphI	GGTGA	4 cut(s)	970, 1867, 2137, 2390
Hpy166II	GTNNAC	7 cut(s)	625, 857, 923, 1467, 1643, 1715, 2004
Hpy188III	TCNNGA	9 cut(s)	569, 695, 1460, 1552, 1586, 1613, 1865, 2046, 2217
Hpy8I	GTNNAC	7 cut(s)	625, 857, 923, 1467, 1643, 1715, 2004
Hpy99I	CGWCG	1 cut(s)	1120
HpyAV	CCTTC	9 cut(s)	86, 155, 379, 396, 683, 922, 1126, 1836, 1926
HpyCH4III	ACNGT	8 cut(s)	629, 1006, 1549, 1997, 2167, 2203, 2273, 2416
HpyCH4IV	ACGT	3 cut(s)	830, 1251, 2076
HpyF10VI	GCNNNNNNNGC	5 cut(s)	476, 508, 1286, 1391, 1484
HpyF3I	CTNAG	6 cut(s)	222, 327, 982, 1177, 1245, 1866
HpySE526I	ACGT	3 cut(s)	830, 1251, 2076
Hsp92I	GRCGYC	1 cut(s)	1251
Hsp92II	CATG	9 cut(s)	159, 341, 595, 662, 698, 1512, 1616, 1906, 2188
HspAI	GCGC	1 cut(s)	2024
KflI	GGGWCCC	1 cut(s)	547
KpnI	GGTACC	1 cut(s)	1780
Ksp22I	TGATCA	1 cut(s)	2380
Kzo9I	GATC	8 cut(s)	482, 931, 1119, 1210, 1609, 1912, 2320, 2380
LguI	GCTCTTC	1 cut(s)	1167
LmnI	GCTCC	3 cut(s)	182, 1959, 2248
Lsp1109I	GCAGC	7 cut(s)	412, 434, 863, 1443, 1499, 1660, 1682
LweI	GCATC	3 cut(s)	312, 982, 1033
MabI	ACCWGGT	1 cut(s)	1636
MaeI	CTAG	4 cut(s)	480, 873, 1805, 2315
MaeII	ACGT	3 cut(s)	830, 1251, 2076
MaeIII	GTNAC	5 cut(s)	330, 415, 1412, 1726, 2167
MalI	GATC	8 cut(s)	484, 933, 1121, 1212, 1611, 1914, 2322, 2382
MboI	GATC	8 cut(s)	482, 931, 1119, 1210, 1609, 1912, 2320, 2380
MfeI	CAATTG	2 cut(s)	612, 2421
MflI	RGATCY	2 cut(s)	931, 1210
MhlI	GDGCHC	6 cut(s)	223, 526, 925, 1269, 1804, 2245
MlsI	TGGCCA	1 cut(s)	1001
MluNI	TGGCCA	1 cut(s)	1001
MlyI	GAGTC	3 cut(s)	338, 433, 1877
MmeI	TCCRAC	1 cut(s)	286
Mox20I	TGGCCA	1 cut(s)	1001
MroXI	GAANNNNTTC	2 cut(s)	629, 1539
MscI	TGGCCA	1 cut(s)	1001
MslI	CAYNNNNRTG	2 cut(s)	699, 2118
Msp20I	TGGCCA	1 cut(s)	1001
MspA1I	CMGCKG	4 cut(s)	425, 1490, 1673, 2257
MspCI	CTTAAG	1 cut(s)	1987
MspI	CCGG	2 cut(s)	1835, 1931
MspR9I	CCNGG	6 cut(s)	360, 579, 1638, 1782, 1836, 1932
MunI	CAATTG	2 cut(s)	612, 2421
Mva1269I	GAATGC	2 cut(s)	1761, 2310
MvaI	CCWGG	4 cut(s)	360, 579, 1638, 1782
MvnI	CGCG	1 cut(s)	1750
MwoI	GCNNNNNNNGC	5 cut(s)	476, 508, 1286, 1391, 1484
NciI	CCSGG	2 cut(s)	1836, 1932
NcoI	CCATGG	2 cut(s)	337, 591
NdeII	GATC	8 cut(s)	482, 931, 1119, 1210, 1609, 1912, 2320, 2380
NheI	GCTAGC	1 cut(s)	872
NlaIII	CATG	9 cut(s)	159, 341, 595, 662, 698, 1512, 1616, 1906, 2188
NmuCI	GTSAC	3 cut(s)	330, 415, 2167
PagI	TCATGA	2 cut(s)	694, 1612
PasI	CCCWGGG	2 cut(s)	578, 1781
PciSI	GCTCTTC	1 cut(s)	1167
PctI	GAATGC	2 cut(s)	1761, 2310
PdmI	GAANNNNTTC	2 cut(s)	629, 1539
PfeI	GAWTC	6 cut(s)	1423, 1693, 1752, 1787, 2063, 2138
PflMI	CCANNNNNTGG	1 cut(s)	299
PfoI	TCCNGGA	1 cut(s)	1930
PkrI	GCNGC	7 cut(s)	424, 427, 878, 1433, 1489, 1672, 1675
PleI	GAGTC	3 cut(s)	337, 433, 1876
PpsI	GAGTC	3 cut(s)	337, 433, 1876
Ppu21I	YACGTR	1 cut(s)	831
PpuMI	RGGWCCY	3 cut(s)	547, 586, 1241
PshBI	ATTAAT	2 cut(s)	1080, 2430
Psp124BI	GAGCTC	1 cut(s)	223
Psp5II	RGGWCCY	3 cut(s)	547, 586, 1241
Psp6I	CCWGG	4 cut(s)	358, 577, 1636, 1780
PspFI	CCCAGC	4 cut(s)	111, 506, 1402, 1523
PspGI	CCWGG	4 cut(s)	358, 577, 1636, 1780
PspPI	GGNCC	9 cut(s)	356, 447, 547, 586, 1241, 1376, 1651, 1715, 1908
PspPPI	RGGWCCY	3 cut(s)	547, 586, 1241
PsrI	GAACNNNNNNTAC	2 cut(s)	894, 926
PstI	CTGCAG	2 cut(s)	424, 1433
PstNI	CAGNNNCTG	1 cut(s)	1052
PsuI	RGATCY	2 cut(s)	931, 1210
PvuII	CAGCTG	4 cut(s)	425, 1490, 1673, 2257
RsaI	GTAC	9 cut(s)	491, 1090, 1258, 1466, 1506, 1701, 1778, 2079, 2291
RsaNI	GTAC	9 cut(s)	490, 1089, 1257, 1465, 1505, 1700, 1777, 2078, 2290
RseI	CAYNNNNRTG	2 cut(s)	699, 2118
SacI	GAGCTC	1 cut(s)	223
SapI	GCTCTTC	1 cut(s)	1167
SatI	GCNGC	7 cut(s)	423, 426, 877, 1432, 1488, 1671, 1674
Sau3AI	GATC	8 cut(s)	482, 931, 1119, 1210, 1609, 1912, 2320, 2380
Sau96I	GGNCC	9 cut(s)	356, 447, 547, 586, 1241, 1376, 1651, 1715, 1908
SchI	GAGTC	3 cut(s)	338, 433, 1877
ScrFI	CCNGG	6 cut(s)	360, 579, 1638, 1782, 1836, 1932
SduI	GDGCHC	6 cut(s)	223, 526, 925, 1269, 1804, 2245
SexAI	ACCWGGT	1 cut(s)	1636
SfaNI	GCATC	3 cut(s)	312, 982, 1033
SfcI	CTRYAG	3 cut(s)	420, 1429, 1993
SinI	GGWCC	6 cut(s)	447, 547, 586, 1241, 1376, 1715
SmiMI	CAYNNNNRTG	2 cut(s)	699, 2118
SmlI	CTYRAG	5 cut(s)	1283, 1920, 1987, 2054, 2143
SmoI	CTYRAG	5 cut(s)	1283, 1920, 1987, 2054, 2143
SnaBI	TACGTA	1 cut(s)	831
SsiI	CCGC	3 cut(s)	1189, 1748, 1794
SspMI	CTAG	4 cut(s)	480, 873, 1805, 2315
SstI	GAGCTC	1 cut(s)	223
StyD4I	CCNGG	6 cut(s)	358, 577, 1636, 1780, 1834, 1930
StyI	CCWWGG	5 cut(s)	337, 591, 634, 1192, 1362
TaaI	ACNGT	8 cut(s)	629, 1006, 1549, 1997, 2167, 2203, 2273, 2416
TaiI	ACGT	3 cut(s)	833, 1254, 2079
TaqI	TCGA	2 cut(s)	1102, 1115
TaqII	GACCGA	1 cut(s)	1632
TatI	WGTACW	3 cut(s)	489, 1256, 1464
TfiI	GAWTC	6 cut(s)	1423, 1693, 1752, 1787, 2063, 2138
TscAI	CASTG	7 cut(s)	424, 754, 1009, 1695, 2170, 2379, 2419
TseFI	GTSAC	3 cut(s)	330, 415, 2167
TseI	GCWGC	7 cut(s)	422, 425, 876, 1431, 1487, 1670, 1673
Tsp45I	GTSAC	3 cut(s)	330, 415, 2167
TspDTI	ATGAA	4 cut(s)	330, 1532, 1904, 1913
TspRI	CASTG	7 cut(s)	424, 754, 1009, 1695, 2170, 2379, 2419
Van91I	CCANNNNNTGG	1 cut(s)	299
Vha464I	CTTAAG	1 cut(s)	1987
VneI	GTGCAC	1 cut(s)	921
VpaK11BI	GGWCC	6 cut(s)	447, 547, 586, 1241, 1376, 1715
VspI	ATTAAT	2 cut(s)	1080, 2430
XagI	CCTNNNNNAGG	1 cut(s)	1920
XapI	RAATTY	2 cut(s)	136, 775
XcmI	CCANNNNNNNNNTGG	1 cut(s)	315
XmiI	GTMKAC	1 cut(s)	856
XmnI	GAANNNNTTC	2 cut(s)	629, 1539
XspI	CTAG	4 cut(s)	480, 873, 1805, 2315
ZraI	GACGTC	1 cut(s)	1252

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.