Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0007191

Physical Location & Seq

Genomic Coordinates Reverse (-)

7828892 .. 7832251

Gene Structure 3360 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g07120.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGCCTCATCACTGGAAATCCCTCTTCCTCCTCCTACAGCTCCTCAATCTCTGCTCCACCAAATCCCAGGCGTTCACATCATCATCAAATCCCCACCTTCAATTCCCATGCAAGCCACCCCACCACAGCTCCTACCCTTTCTGCAACAACTCCCTCCCGATCCCCACCAGAGCTCAGTCCCTAATTTCCCTCCTTACCCTCCAAGAAAAGATCCAACAGCTCTCAAACAGCGCTTCTGCAATCCCCAGACTTGGCATCCCACCCTACGAATGGTGGTCCGAGTCCCTCCACGGCATAGCCACCAACGGCCCTGGTGTCTCCTTCAATGGCACCATCCCTTCAGCCACAAGCTTCCCACAGGTGATTGTCACAGCAGCTGCTTTCAACAGGACTCTCTGGTCCTCCATCGGGGCAGCCATTGCTGTTGAGGCCAGAGCAATGTACAATTTTGGGCAAGCTGGGTTGACTTTTTGGGCACCCAATATCAATATCTTTAGGGACCCCAGATGGGGGAGGGGTCAGGAGACCCCTGGGGAGGACCCCATGGTTGCTTCTGCTTATGCTGTTGAGTTTGTGAAGGGTTTTCAGGGTGGGGGAATTAGAGATGGTGGGCTTGGAGCGAGGACAGTGTTGGAAAGTGATGAGAGTGGTGATAGTTTAATGCTCTCTGCTTGTTGCAAGCATTTCACTGCTTATGATTTGGAGTCGTGGAGGAATTTCAGTAGATATAGCTTCAATGCTGTGGTTTCAGAACAAGATTTGGAGGATACATATCAGCCGCCTTTTCGAAGTTGTATACAACAAGGTAAAGCTAGCTGCTTAATGTGTTCTTACAATGCAGTAAATGGGGTTCCTGCTTGTGCACAGAAGGATCTCTTGGATAAGGCTCGGAACGAGTGGGGATTCAAAGGATATATCACCTCAGACTGTGATGCTGTGGCCACAGTGTTTGAATATCAGAACTACACAAAAAGTCCCGAGGACGCAGTTGCTGATGTTCTTAAAGCAGGGACGGATATTGATTGTGGCACATACTTGCTTCGAAATACTCTATCTACAATCAAACAAGGGAAGGTGCAAGAGGAAGACATAGACAAGGCGCTTCTCAATCTTTTCTCTGTTCAACTCCGTCTTGGGTTATTTAATGGAGATCCCAGAAAAGGGAAATTTGGTAGTTTTGGAGCTCAGGATGTCTGTACCTCAGAGCATAAGACGTTGGCACTTGAGGCAGCAAGGCAGGGAATTGTGCTCCTTAAAAATGATAAGAAGTTTTTGCCTTTGAAAAGGGGTGTTGATTTTTCCTTGGCTGTCATTGGTCCATTGGCAAACAATGCAAGTTTGCTGGGTGGGGATTACACAGGAATTCCCTGCAACCCAAAGAGTCCTTTTGAGGGTCTTCAAGAGTACTCAACTAGAACATCTTATGTAGCTGGCTGCCAGGATGTACCATGTATGTCTGATGCTGGGTTCAAAAAAGCAATTTACGCTGCAAAAAAAGCTGATTTTGTTGTTATAGTCGTCGGTATTGATGCATCGCAAGAAAGAGAAGATCACGATCGAGTTAGTCTTCTCTTACCTGGTAAACAGATGGCCCTTGTATCTTCTGTGGCTGCTGCAAGCAAGGGACCAGTGATTCTAGTTCTTGCTGGTGGTGGACCACTTGACGTAACATTTGCCAAAGAAGATACGCGAATTCCAAGCATTCTTTGGATTGGGTACCCTGGGGAAGCTGGCGGGAGAGCACTAGCAGAAGTCATCTTTGGAGATTTTAATCCAGGTGGAAGGCTGCCTATGACTTGGTATCCTGAGTCATTCACCAATGTACCAATGAATAATATGAACATGAGGGCTGATCCTTCTTTAGGTTACCCTGGAAGAACCTACCGGTTTTACACTGGGGACAGGCTATATGGATTCGGGCATGGGTTAAGCTATAGTAGTTTCACTTACAATATCGTATCAGCGCCAAAAAAGTTAAGCTTGTCAAAACCCTTCAAGGTAGATTTGAGTAAAAATGTACTACACCAACCTGGAGATGTACTTGACCATTTACACATTGATGAGGTAACGTCGTGTGATTCTTTGAGATTCTTTGTTGAAATCGCTGTGAAGAATAACGGAGACATGGATGGAGGCCATAGTGTGATGTTGTTCTCCAGAGTGCCAAAAGTAGTCAAGGGTGCTCCACTACAACAGCTGATCGGATTTAACCGTGTGTATACGGTTTCAAACCAATATACTACAGCATCCATTCTAGTTGATCCCTGTACACATCTAAGCTTTGCGGATGAGCATGGGGAAAGGATATTGCCATTGGGTGAACATGTATTAATGGTAGGAGATATACAACACTTTGTCTCAGTTGAAATTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009044 GO:0016020 GO:0016787 GO:0016798 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0097599 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

792

Amino Acids

86.31

Weight (kDa)

6.24

Isoelectric Point (pI)

33.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10560
fragaria_vesca	FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940 FvH4_1g18940
malus_domestica	MD01G1045300.v1.1
prunus_persica	Prupe.6G210000_v2.0.a1 Prupe.6G210000_v2.0.a1
pyrus_communis	pycom01g07120
rosa_chinensis	RchiOBHm_Chr2g0109951
rosa_laevigata	RLG00000017773
rosa_multiflora	Rmu_sc0005173.1_g000029 Rmu_sc0028281.1_g000001 Rmu_sc0033728.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133850
rosa_rugosa	Rorug02G0164200
rosa_samantha	Rh2AG216100 Rh2BG226200 Rh2CG218300 Rh2DG221700
rosa_wichuraiana	Rw2G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	397
Acc65I	GGTACC	1 cut(s)	1716
AccB1I	GGYRCC	3 cut(s)	329, 475, 1716
AccI	GTMKAC	2 cut(s)	796, 2219
AccII	CGCG	1 cut(s)	1690
AciI	CCGC	3 cut(s)	779, 1734, 2285
AclWI	GGATC	6 cut(s)	154, 205, 879, 1145, 1847, 2255
AcoI	YGGCCR	1 cut(s)	939
AcsI	RAATTY	4 cut(s)	715, 1166, 1362, 1692
AcuI	CTGAAG	1 cut(s)	324
AfaI	GTAC	9 cut(s)	443, 1198, 1406, 1446, 1718, 1824, 2019, 2040, 2269
AfeI	AGCGCT	1 cut(s)	232
AflIII	ACRYGT	1 cut(s)	2323
AgeI	ACCGGT	1 cut(s)	1884
AjnI	CCWGG	9 cut(s)	66, 310, 529, 1437, 1576, 1720, 1774, 1870, 2029
AjuI	GAANNNNNNNTTGG	4 cut(s)	860, 892, 1743, 1775
Alw21I	GWGCWC	6 cut(s)	175, 865, 1186, 1251, 1744, 2185
Alw26I	GTCTC	4 cut(s)	322, 518, 2115, 2362
Alw44I	GTGCAC	1 cut(s)	861
AlwI	GGATC	6 cut(s)	154, 205, 879, 1145, 1847, 2255
AlwNI	CAGNNNCTG	2 cut(s)	377, 992
Ama87I	CYCGRG	1 cut(s)	977
Aor51HI	AGCGCT	1 cut(s)	232
AoxI	GGCC	5 cut(s)	307, 429, 939, 1590, 2134
ApaLI	GTGCAC	1 cut(s)	861
ApoI	RAATTY	4 cut(s)	715, 1166, 1362, 1692
ArsI	GACNNNNNNTTYG	2 cut(s)	1655, 1687
AseI	ATTAAT	2 cut(s)	2330, 2370
AsiGI	ACCGGT	1 cut(s)	1884
Asp718I	GGTACC	1 cut(s)	1716
AspLEI	GCGC	3 cut(s)	233, 1102, 1966
AspS9I	GGNCC	9 cut(s)	276, 308, 399, 499, 538, 1316, 1591, 1625, 1655
AsuHPI	GGTGA	5 cut(s)	373, 662, 910, 1807, 2330
AsuII	TTCGAA	2 cut(s)	787, 1042
AsuNHI	GCTAGC	1 cut(s)	812
AvaI	CYCGRG	1 cut(s)	977
AvaII	GGWCC	7 cut(s)	276, 399, 499, 538, 1316, 1625, 1655
BaeGI	GKGCMC	2 cut(s)	478, 865
BaeI	ACNNNNGTAYC	2 cut(s)	1806, 1839
BalI	TGGCCA	1 cut(s)	941
BanI	GGYRCC	3 cut(s)	329, 475, 1716
BanII	GRGCYC	2 cut(s)	175, 1186
BbsI	GAAGAC	3 cut(s)	1092, 1388, 1559
Bbv12I	GWGCWC	6 cut(s)	175, 865, 1186, 1251, 1744, 2185
BccI	CCATC	6 cut(s)	341, 413, 501, 599, 1582, 2123
BceAI	ACGGC	2 cut(s)	307, 322
BciT130I	CCWGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
BciVI	GTATCC	2 cut(s)	760, 1812
BcoDI	GTCTC	4 cut(s)	322, 518, 2115, 2362
BfaI	CTAG	5 cut(s)	813, 1413, 1637, 1745, 2255
BfmI	CTRYAG	3 cut(s)	35, 1933, 2241
BfoI	RGCGCY	3 cut(s)	234, 1103, 1967
BfuI	GTATCC	2 cut(s)	760, 1812
BmcAI	AGTACT	1 cut(s)	1406
Bme1390I	CCNGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
Bme18I	GGWCC	7 cut(s)	276, 399, 499, 538, 1316, 1625, 1655
BmeT110I	CYCGRG	1 cut(s)	977
BmgT120I	GGNCC	9 cut(s)	276, 308, 399, 499, 538, 1316, 1591, 1625, 1655
BmiI	GGNNCC	8 cut(s)	331, 477, 500, 501, 540, 852, 1626, 1718
BmrFI	CCNGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
BmrI	ACTGGG	1 cut(s)	1905
BmsI	GCATC	6 cut(s)	264, 922, 1450, 1519, 1541, 2255
BmtI	GCTAGC	1 cut(s)	816
BmuI	ACTGGG	1 cut(s)	1905
BpiI	GAAGAC	3 cut(s)	1092, 1388, 1559
BpmI	CTGGAG	2 cut(s)	2052, 2140
Bpu10I	CCTNAGC	1 cut(s)	1185
Bpu14I	TTCGAA	2 cut(s)	787, 1042
BpuEI	CTTGAG	1 cut(s)	1244
BsaBI	GATNNNNATC	3 cut(s)	771, 1554, 1770
BsaI	GGTCTC	1 cut(s)	518
BsaWI	WCCGGW	1 cut(s)	1884
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bse118I	RCCGGY	1 cut(s)	1884
Bse1I	ACTGG	3 cut(s)	17, 1628, 1900
Bse3DI	GCAATG	2 cut(s)	417, 444
Bse8I	GATNNNNATC	3 cut(s)	771, 1554, 1770
BseBI	CCWGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
BseGI	GGATG	7 cut(s)	255, 333, 1195, 1447, 2134, 2246, 2293
BseJI	GATNNNNATC	3 cut(s)	771, 1554, 1770
BseMI	GCAATG	2 cut(s)	417, 444
BseMII	CTCAG	6 cut(s)	188, 936, 1199, 1215, 1797, 2373
BseNI	ACTGG	3 cut(s)	17, 1628, 1900
BseRI	GAGGAG	2 cut(s)	20, 32
BseSI	GKGCMC	2 cut(s)	478, 865
BseYI	CCCAGC	3 cut(s)	458, 1342, 1463
Bsh1236I	CGCG	1 cut(s)	1690
Bsh1285I	CGRYCG	1 cut(s)	1558
BshFI	GGCC	5 cut(s)	309, 431, 941, 1592, 2136
BshNI	GGYRCC	3 cut(s)	329, 475, 1716
BshTI	ACCGGT	1 cut(s)	1884
BsiEI	CGRYCG	1 cut(s)	1558
BsiHKAI	GWGCWC	6 cut(s)	175, 865, 1186, 1251, 1744, 2185
BsiHKCI	CYCGRG	1 cut(s)	977
BsiSI	CCGG	1 cut(s)	1885
BslFI	GGGAC	7 cut(s)	163, 268, 512, 960, 1024, 1638, 1913
BsmAI	GTCTC	4 cut(s)	322, 518, 2115, 2362
BsmFI	GGGAC	7 cut(s)	163, 268, 512, 960, 1024, 1638, 1913
BsmI	GAATGC	1 cut(s)	1701
BsnI	GGCC	5 cut(s)	309, 431, 941, 1592, 2136
Bso31I	GGTCTC	1 cut(s)	518
BsoBI	CYCGRG	1 cut(s)	977
Bsp119I	TTCGAA	2 cut(s)	787, 1042
Bsp1286I	GDGCHC	7 cut(s)	175, 478, 865, 1186, 1251, 1744, 2185
Bsp1407I	TGTACA	2 cut(s)	441, 2267
Bsp143I	GATC	9 cut(s)	159, 210, 871, 1150, 1549, 1555, 1852, 2199, 2260
Bsp19I	CCATGG	1 cut(s)	543
BspACI	CCGC	3 cut(s)	779, 1734, 2285
BspANI	GGCC	5 cut(s)	309, 431, 941, 1592, 2136
BspCNI	CTCAG	6 cut(s)	187, 935, 1198, 1214, 1798, 2372
BspFNI	CGCG	1 cut(s)	1690
BspLI	GGNNCC	8 cut(s)	331, 477, 500, 501, 540, 852, 1626, 1718
BspOI	GCTAGC	1 cut(s)	816
BspPI	GGATC	6 cut(s)	154, 205, 879, 1145, 1847, 2255
BspT104I	TTCGAA	2 cut(s)	787, 1042
BspT107I	GGYRCC	3 cut(s)	329, 475, 1716
BspTNI	GGTCTC	1 cut(s)	518
BsrDI	GCAATG	2 cut(s)	417, 444
BsrFI	RCCGGY	1 cut(s)	1884
BsrGI	TGTACA	2 cut(s)	441, 2267
BsrI	ACTGG	3 cut(s)	17, 1628, 1900
BssAI	RCCGGY	1 cut(s)	1884
BssMI	GATC	9 cut(s)	159, 210, 871, 1150, 1549, 1555, 1852, 2199, 2260
BssNAI	GTATAC	2 cut(s)	797, 2220
BssT1I	CCWWGG	2 cut(s)	543, 1302
Bst1107I	GTATAC	2 cut(s)	797, 2220
Bst2UI	CCWGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
Bst4CI	ACNGT	5 cut(s)	628, 929, 946, 2213, 2224
Bst6I	CTCTTC	1 cut(s)	29
BstAPI	GCANNNNNTGC	2 cut(s)	419, 1331
BstAUI	TGTACA	2 cut(s)	441, 2267
BstBI	TTCGAA	2 cut(s)	787, 1042
BstC8I	GCNNGC	7 cut(s)	113, 456, 680, 814, 1432, 1618, 1732
BstDEI	CTNAG	7 cut(s)	174, 922, 1185, 1201, 1806, 2276, 2359
BstDSI	CCRYGG	2 cut(s)	289, 543
BstEII	GGTNACC	1 cut(s)	1865
BstENI	CCTNNNNNAGG	1 cut(s)	1860
BstF5I	GGATG	7 cut(s)	255, 333, 1195, 1447, 2134, 2246, 2293
BstFNI	CGCG	1 cut(s)	1690
BstH2I	RGCGCY	3 cut(s)	234, 1103, 1967
BstHHI	GCGC	3 cut(s)	233, 1102, 1966
BstKTI	GATC	9 cut(s)	162, 213, 874, 1153, 1552, 1558, 1855, 2202, 2263
BstMAI	GTCTC	4 cut(s)	322, 518, 2115, 2362
BstMBI	GATC	9 cut(s)	159, 210, 871, 1150, 1549, 1555, 1852, 2199, 2260
BstMCI	CGRYCG	1 cut(s)	1558
BstMWI	GCNNNNNNNGC	6 cut(s)	419, 428, 1226, 1331, 1484, 1496
BstNI	CCWGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
BstNSI	RCATGY	1 cut(s)	2327
BstPI	GGTNACC	1 cut(s)	1865
BstSCI	CCNGG	9 cut(s)	66, 310, 529, 1437, 1576, 1720, 1774, 1870, 2029
BstSFI	CTRYAG	3 cut(s)	35, 1933, 2241
BstSLI	GKGCMC	2 cut(s)	478, 865
BstUI	CGCG	1 cut(s)	1690
BstV2I	GAAGAC	3 cut(s)	1092, 1388, 1559
BstX2I	RGATCY	3 cut(s)	210, 871, 1150
BstYI	RGATCY	3 cut(s)	210, 871, 1150
BstZ17I	GTATAC	2 cut(s)	797, 2220
BsuI	GTATCC	2 cut(s)	760, 1812
BsuRI	GGCC	5 cut(s)	309, 431, 941, 1592, 2136
BtgI	CCRYGG	2 cut(s)	289, 543
BtgZI	GCGATG	1 cut(s)	1518
BtsCI	GGATG	7 cut(s)	255, 333, 1195, 1447, 2134, 2246, 2293
BtsI	GCAGTG	1 cut(s)	687
BtsIMutI	CAGTG	6 cut(s)	10, 633, 687, 951, 1635, 1893
Cac8I	GCNNGC	7 cut(s)	113, 456, 680, 814, 1432, 1618, 1732
CaiI	CAGNNNCTG	2 cut(s)	377, 992
CfoI	GCGC	3 cut(s)	233, 1102, 1966
Cfr10I	RCCGGY	1 cut(s)	1884
Cfr13I	GGNCC	9 cut(s)	276, 308, 399, 499, 538, 1316, 1591, 1625, 1655
CseI	GACGC	1 cut(s)	992
CsiI	ACCWGGT	1 cut(s)	1576
Csp6I	GTAC	9 cut(s)	442, 1197, 1405, 1445, 1717, 1823, 2018, 2039, 2268
CspAI	ACCGGT	1 cut(s)	1884
CspCI	CAANNNNNGTGG	2 cut(s)	931, 966
CviAII	CATG	8 cut(s)	108, 544, 1449, 1843, 1922, 2125, 2294, 2324
CviQI	GTAC	9 cut(s)	442, 1197, 1405, 1445, 1717, 1823, 2018, 2039, 2268
DdeI	CTNAG	7 cut(s)	174, 922, 1185, 1201, 1806, 2276, 2359
DpnI	GATC	9 cut(s)	161, 212, 873, 1152, 1551, 1557, 1854, 2201, 2262
DpnII	GATC	9 cut(s)	159, 210, 871, 1150, 1549, 1555, 1852, 2199, 2260
DrdI	GACNNNNNNGTC	1 cut(s)	397
DseDI	GACNNNNNNGTC	1 cut(s)	397
EaeI	YGGCCR	1 cut(s)	939
Eam1104I	CTCTTC	1 cut(s)	29
EarI	CTCTTC	1 cut(s)	29
Ecl136II	GAGCTC	2 cut(s)	173, 1184
Eco130I	CCWWGG	2 cut(s)	543, 1302
Eco24I	GRGCYC	2 cut(s)	175, 1186
Eco31I	GGTCTC	1 cut(s)	518
Eco47I	GGWCC	7 cut(s)	276, 399, 499, 538, 1316, 1625, 1655
Eco47III	AGCGCT	1 cut(s)	232
Eco53kI	GAGCTC	2 cut(s)	173, 1184
Eco57I	CTGAAG	1 cut(s)	324
Eco88I	CYCGRG	1 cut(s)	977
Eco91I	GGTNACC	1 cut(s)	1865
EcoICRI	GAGCTC	2 cut(s)	173, 1184
EcoNI	CCTNNNNNAGG	1 cut(s)	1860
EcoO109I	RGGNCCY	2 cut(s)	499, 538
EcoO65I	GGTNACC	1 cut(s)	1865
EcoRI	GAATTC	2 cut(s)	1362, 1692
EcoRII	CCWGG	9 cut(s)	66, 310, 529, 1437, 1576, 1720, 1774, 1870, 2029
EcoT14I	CCWWGG	2 cut(s)	543, 1302
EcoT22I	ATGCAT	1 cut(s)	1534
EcoT38I	GRGCYC	2 cut(s)	175, 1186
ErhI	CCWWGG	2 cut(s)	543, 1302
FaeI	CATG	8 cut(s)	111, 547, 1452, 1846, 1925, 2128, 2297, 2327
FalI	AAGNNNNNCTT	4 cut(s)	860, 892, 1964, 1996
FaqI	GGGAC	7 cut(s)	163, 268, 512, 960, 1024, 1638, 1913
FatI	CATG	8 cut(s)	107, 543, 1448, 1842, 1921, 2124, 2293, 2323
FauI	CCCGC	1 cut(s)	1727
FblI	GTMKAC	2 cut(s)	796, 2219
FokI	GGATG	7 cut(s)	242, 320, 1202, 1454, 2141, 2233, 2300
FriOI	GRGCYC	2 cut(s)	175, 1186
FspBI	CTAG	5 cut(s)	813, 1413, 1637, 1745, 2255
GlaI	GCGC	3 cut(s)	232, 1101, 1965
GsaI	CCCAGC	3 cut(s)	462, 1346, 1467
GsuI	CTGGAG	2 cut(s)	2052, 2140
HaeII	RGCGCY	3 cut(s)	234, 1103, 1967
HaeIII	GGCC	5 cut(s)	309, 431, 941, 1592, 2136
HapII	CCGG	1 cut(s)	1885
HgaI	GACGC	1 cut(s)	992
HhaI	GCGC	3 cut(s)	233, 1102, 1966
Hin1II	CATG	8 cut(s)	111, 547, 1452, 1846, 1925, 2128, 2297, 2327
Hin6I	GCGC	3 cut(s)	231, 1100, 1964
HinP1I	GCGC	3 cut(s)	231, 1100, 1964
HincII	GTYRAC	1 cut(s)	465
HindII	GTYRAC	1 cut(s)	465
HindIII	AAGCTT	3 cut(s)	349, 1978, 2278
HpaII	CCGG	1 cut(s)	1885
HphI	GGTGA	5 cut(s)	373, 662, 910, 1807, 2330
Hpy166II	GTNNAC	9 cut(s)	75, 465, 797, 863, 1583, 1655, 2220, 2270, 2321
Hpy188I	TCNGA	8 cut(s)	280, 751, 891, 925, 960, 1204, 1459, 2204
Hpy188III	TCNNGA	8 cut(s)	157, 521, 977, 1187, 1400, 1553, 1805, 2157
Hpy8I	GTNNAC	9 cut(s)	75, 465, 797, 863, 1583, 1655, 2220, 2270, 2321
Hpy99I	CGWCG	2 cut(s)	1523, 2074
HpyAV	CCTTC	9 cut(s)	107, 331, 348, 571, 862, 1066, 1776, 1866, 2002
HpyCH4III	ACNGT	5 cut(s)	628, 929, 946, 2213, 2224
HpyCH4IV	ACGT	3 cut(s)	1214, 1665, 2069
HpyF10VI	GCNNNNNNNGC	6 cut(s)	419, 428, 1226, 1331, 1484, 1496
HpyF3I	CTNAG	7 cut(s)	174, 922, 1185, 1201, 1806, 2276, 2359
HpySE526I	ACGT	3 cut(s)	1214, 1665, 2069
Hsp92II	CATG	8 cut(s)	111, 547, 1452, 1846, 1925, 2128, 2297, 2327
HspAI	GCGC	3 cut(s)	231, 1100, 1964
KflI	GGGWCCC	1 cut(s)	499
KpnI	GGTACC	1 cut(s)	1720
Kzo9I	GATC	9 cut(s)	159, 210, 871, 1150, 1549, 1555, 1852, 2199, 2260
LmnI	GCTCC	7 cut(s)	45, 59, 134, 617, 1181, 1254, 2188
LweI	GCATC	6 cut(s)	264, 922, 1450, 1519, 1541, 2255
MabI	ACCWGGT	1 cut(s)	1576
MaeI	CTAG	5 cut(s)	813, 1413, 1637, 1745, 2255
MaeII	ACGT	3 cut(s)	1214, 1665, 2069
MaeIII	GTNAC	4 cut(s)	367, 1666, 1865, 2065
MalI	GATC	9 cut(s)	161, 212, 873, 1152, 1551, 1557, 1854, 2201, 2262
MboI	GATC	9 cut(s)	159, 210, 871, 1150, 1549, 1555, 1852, 2199, 2260
MboII	GAAGA	9 cut(s)	16, 1097, 1388, 1559, 1559, 1593, 1694, 1887, 2122
MflI	RGATCY	3 cut(s)	210, 871, 1150
MhlI	GDGCHC	7 cut(s)	175, 478, 865, 1186, 1251, 1744, 2185
MlsI	TGGCCA	1 cut(s)	941
MluNI	TGGCCA	1 cut(s)	941
MlyI	GAGTC	5 cut(s)	290, 385, 713, 1390, 1817
MmeI	TCCRAC	2 cut(s)	238, 612
Mox20I	TGGCCA	1 cut(s)	941
Mph1103I	ATGCAT	1 cut(s)	1534
MscI	TGGCCA	1 cut(s)	941
MslI	CAYNNNNRTG	1 cut(s)	2058
Msp20I	TGGCCA	1 cut(s)	941
MspA1I	CMGCKG	2 cut(s)	377, 2197
MspI	CCGG	1 cut(s)	1885
MspR9I	CCNGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
Mva1269I	GAATGC	1 cut(s)	1701
MvaI	CCWGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
MvnI	CGCG	1 cut(s)	1690
MwoI	GCNNNNNNNGC	6 cut(s)	419, 428, 1226, 1331, 1484, 1496
NcoI	CCATGG	1 cut(s)	543
NdeII	GATC	9 cut(s)	159, 210, 871, 1150, 1549, 1555, 1852, 2199, 2260
NheI	GCTAGC	1 cut(s)	812
NlaIII	CATG	8 cut(s)	111, 547, 1452, 1846, 1925, 2128, 2297, 2327
NlaIV	GGNNCC	8 cut(s)	331, 477, 500, 501, 540, 852, 1626, 1718
NmuCI	GTSAC	1 cut(s)	367
NsiI	ATGCAT	1 cut(s)	1534
NspI	RCATGY	1 cut(s)	2327
NspV	TTCGAA	2 cut(s)	787, 1042
PacI	TTAATTAA	1 cut(s)	2374
PasI	CCCWGGG	2 cut(s)	530, 1721
PciI	ACATGT	1 cut(s)	2323
PctI	GAATGC	1 cut(s)	1701
PfeI	GAWTC	5 cut(s)	903, 1633, 1914, 2078, 2088
PinAI	ACCGGT	1 cut(s)	1884
Ple19I	CGATCG	1 cut(s)	1558
PleI	GAGTC	5 cut(s)	289, 385, 712, 1389, 1816
PpsI	GAGTC	5 cut(s)	289, 385, 712, 1389, 1816
PpuMI	RGGWCCY	2 cut(s)	499, 538
PscI	ACATGT	1 cut(s)	2323
PshBI	ATTAAT	2 cut(s)	2330, 2370
Psp124BI	GAGCTC	2 cut(s)	175, 1186
Psp5II	RGGWCCY	2 cut(s)	499, 538
Psp6I	CCWGG	9 cut(s)	66, 310, 529, 1437, 1576, 1720, 1774, 1870, 2029
PspEI	GGTNACC	1 cut(s)	1865
PspFI	CCCAGC	3 cut(s)	458, 1342, 1463
PspGI	CCWGG	9 cut(s)	66, 310, 529, 1437, 1576, 1720, 1774, 1870, 2029
PspN4I	GGNNCC	8 cut(s)	331, 477, 500, 501, 540, 852, 1626, 1718
PspPI	GGNCC	9 cut(s)	276, 308, 399, 499, 538, 1316, 1591, 1625, 1655
PspPPI	RGGWCCY	2 cut(s)	499, 538
PsrI	GAACNNNNNNTAC	2 cut(s)	834, 866
PstNI	CAGNNNCTG	2 cut(s)	377, 992
PsuI	RGATCY	3 cut(s)	210, 871, 1150
PvuI	CGATCG	1 cut(s)	1558
PvuII	CAGCTG	2 cut(s)	377, 2197
RsaI	GTAC	9 cut(s)	443, 1198, 1406, 1446, 1718, 1824, 2019, 2040, 2269
RsaNI	GTAC	9 cut(s)	442, 1197, 1405, 1445, 1717, 1823, 2018, 2039, 2268
RseI	CAYNNNNRTG	1 cut(s)	2058
SacI	GAGCTC	2 cut(s)	175, 1186
Sau3AI	GATC	9 cut(s)	159, 210, 871, 1150, 1549, 1555, 1852, 2199, 2260
Sau96I	GGNCC	9 cut(s)	276, 308, 399, 499, 538, 1316, 1591, 1625, 1655
ScaI	AGTACT	1 cut(s)	1406
SchI	GAGTC	5 cut(s)	290, 385, 713, 1390, 1817
ScrFI	CCNGG	9 cut(s)	68, 312, 531, 1439, 1578, 1722, 1776, 1872, 2031
SduI	GDGCHC	7 cut(s)	175, 478, 865, 1186, 1251, 1744, 2185
SexAI	ACCWGGT	1 cut(s)	1576
SfaNI	GCATC	6 cut(s)	264, 922, 1450, 1519, 1541, 2255
SfcI	CTRYAG	3 cut(s)	35, 1933, 2241
SfuI	TTCGAA	2 cut(s)	787, 1042
SinI	GGWCC	7 cut(s)	276, 399, 499, 538, 1316, 1625, 1655
SmiMI	CAYNNNNRTG	1 cut(s)	2058
SmlI	CTYRAG	1 cut(s)	1223
SmoI	CTYRAG	1 cut(s)	1223
SsiI	CCGC	3 cut(s)	779, 1734, 2285
SspMI	CTAG	5 cut(s)	813, 1413, 1637, 1745, 2255
SstI	GAGCTC	2 cut(s)	175, 1186
StyD4I	CCNGG	9 cut(s)	66, 310, 529, 1437, 1576, 1720, 1774, 1870, 2029
StyI	CCWWGG	2 cut(s)	543, 1302
TaaI	ACNGT	5 cut(s)	628, 929, 946, 2213, 2224
TaiI	ACGT	3 cut(s)	1217, 1668, 2072
TaqI	TCGA	3 cut(s)	787, 1042, 1558
TatI	WGTACW	5 cut(s)	441, 1404, 2017, 2038, 2267
TauI	GCSGC	1 cut(s)	781
TfiI	GAWTC	5 cut(s)	903, 1633, 1914, 2078, 2088
TscAI	CASTG	6 cut(s)	17, 633, 694, 951, 1635, 1900
TseFI	GTSAC	1 cut(s)	367
Tsp45I	GTSAC	1 cut(s)	367
TspDTI	ATGAA	2 cut(s)	1844, 1853
TspGWI	ACGGA	3 cut(s)	1028, 1118, 2133
TspRI	CASTG	6 cut(s)	17, 633, 694, 951, 1635, 1900
VneI	GTGCAC	1 cut(s)	861
VpaK11BI	GGWCC	7 cut(s)	276, 399, 499, 538, 1316, 1625, 1655
VspI	ATTAAT	2 cut(s)	2330, 2370
XagI	CCTNNNNNAGG	1 cut(s)	1860
XapI	RAATTY	4 cut(s)	715, 1166, 1362, 1692
XceI	RCATGY	1 cut(s)	2327
XcmI	CCANNNNNNNNNTGG	2 cut(s)	267, 1704
XmiI	GTMKAC	2 cut(s)	796, 2219
XspI	CTAG	5 cut(s)	813, 1413, 1637, 1745, 2255
ZrmI	AGTACT	1 cut(s)	1406
Zsp2I	ATGCAT	1 cut(s)	1534

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.