TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g19921 FvH4_5g03280 |
| rosa_laevigata | RLG00000017921 RLG00000017922 RLG00000017924 |
| rosa_multiflora | Rmu_sc0000448.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00132130 |
| rosa_rugosa | Rorug02G0176100 |
| rosa_wichuraiana | Rw2G017680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 94 |
| AccB1I | GGYRCC | 2 cut(s) | 476, 629 |
| AciI | CCGC | 2 cut(s) | 41, 547 |
| AclWI | GGATC | 2 cut(s) | 343, 618 |
| AdeI | CACNNNGTG | 1 cut(s) | 920 |
| AfaI | GTAC | 7 cut(s) | 9, 66, 131, 455, 515, 572, 704 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 79, 585 |
| AflIII | ACRYGT | 2 cut(s) | 13, 519 |
| AgsI | TTSAA | 2 cut(s) | 487, 645 |
| AjiI | CACGTC | 2 cut(s) | 14, 520 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 118, 150, 404, 436 |
| AluBI | AGCT | 1 cut(s) | 962 |
| AluI | AGCT | 1 cut(s) | 962 |
| Alw21I | GWGCWC | 2 cut(s) | 152, 725 |
| Alw26I | GTCTC | 1 cut(s) | 873 |
| AlwI | GGATC | 2 cut(s) | 343, 618 |
| Ama87I | CYCGRG | 1 cut(s) | 30 |
| ApeKI | GCWGC | 1 cut(s) | 656 |
| AsuC2I | CCSGG | 3 cut(s) | 31, 32, 538 |
| AsuHPI | GGTGA | 3 cut(s) | 114, 526, 808 |
| AvaI | CYCGRG | 1 cut(s) | 30 |
| BaeGI | GKGCMC | 2 cut(s) | 197, 770 |
| BanI | GGYRCC | 2 cut(s) | 476, 629 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 236, 268, 892, 924 |
| Bbv12I | GWGCWC | 2 cut(s) | 152, 725 |
| BbvI | GCAGC | 1 cut(s) | 643 |
| BccI | CCATC | 3 cut(s) | 271, 325, 927 |
| BcnI | CCSGG | 3 cut(s) | 31, 32, 538 |
| BcoDI | GTCTC | 1 cut(s) | 873 |
| BfaI | CTAG | 2 cut(s) | 297, 963 |
| BisI | GCNGC | 1 cut(s) | 657 |
| BlsI | GCNGC | 1 cut(s) | 658 |
| Bme1390I | CCNGG | 3 cut(s) | 31, 32, 538 |
| BmeT110I | CYCGRG | 1 cut(s) | 30 |
| BmgBI | CACGTC | 2 cut(s) | 14, 520 |
| BmiI | GGNNCC | 2 cut(s) | 478, 631 |
| BmrFI | CCNGG | 3 cut(s) | 31, 32, 538 |
| BmsI | GCATC | 1 cut(s) | 277 |
| BpuMI | CCSGG | 3 cut(s) | 31, 32, 538 |
| BsaBI | GATNNNNATC | 2 cut(s) | 281, 937 |
| BsaJI | CCNNGG | 4 cut(s) | 29, 30, 31, 537 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 79, 585 |
| Bse1I | ACTGG | 1 cut(s) | 624 |
| Bse8I | GATNNNNATC | 2 cut(s) | 281, 937 |
| BseDI | CCNNGG | 4 cut(s) | 29, 30, 31, 537 |
| BseGI | GGATG | 2 cut(s) | 282, 938 |
| BseJI | GATNNNNATC | 2 cut(s) | 281, 937 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 79, 585 |
| BseMII | CTCAG | 4 cut(s) | 12, 275, 518, 908 |
| BseNI | ACTGG | 1 cut(s) | 624 |
| BseRI | GAGGAG | 1 cut(s) | 371 |
| BseSI | GKGCMC | 2 cut(s) | 197, 770 |
| BseXI | GCAGC | 1 cut(s) | 643 |
| BshNI | GGYRCC | 2 cut(s) | 476, 629 |
| BsiHKAI | GWGCWC | 2 cut(s) | 152, 725 |
| BsiHKCI | CYCGRG | 1 cut(s) | 30 |
| BsiSI | CCGG | 2 cut(s) | 31, 537 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 79, 585 |
| BsmAI | GTCTC | 1 cut(s) | 873 |
| BsoBI | CYCGRG | 1 cut(s) | 30 |
| Bsp1286I | GDGCHC | 4 cut(s) | 152, 197, 725, 770 |
| Bsp1407I | TGTACA | 2 cut(s) | 64, 570 |
| Bsp143I | GATC | 3 cut(s) | 335, 432, 610 |
| BspACI | CCGC | 2 cut(s) | 41, 547 |
| BspCNI | CTCAG | 4 cut(s) | 13, 274, 519, 909 |
| BspLI | GGNNCC | 2 cut(s) | 478, 631 |
| BspPI | GGATC | 2 cut(s) | 343, 618 |
| BspT107I | GGYRCC | 2 cut(s) | 476, 629 |
| BsrGI | TGTACA | 2 cut(s) | 64, 570 |
| BsrI | ACTGG | 1 cut(s) | 624 |
| BssECI | CCNNGG | 4 cut(s) | 29, 30, 31, 537 |
| BssMI | GATC | 3 cut(s) | 335, 432, 610 |
| Bst4CI | ACNGT | 1 cut(s) | 816 |
| Bst6I | CTCTTC | 2 cut(s) | 646, 660 |
| BstAUI | TGTACA | 2 cut(s) | 64, 570 |
| BstDEI | CTNAG | 5 cut(s) | 21, 261, 457, 527, 917 |
| BstF5I | GGATG | 2 cut(s) | 282, 938 |
| BstKTI | GATC | 3 cut(s) | 338, 435, 613 |
| BstMAI | GTCTC | 1 cut(s) | 873 |
| BstMBI | GATC | 3 cut(s) | 335, 432, 610 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 968 |
| BstNSI | RCATGY | 1 cut(s) | 362 |
| BstSCI | CCNGG | 3 cut(s) | 29, 30, 536 |
| BstSLI | GKGCMC | 2 cut(s) | 197, 770 |
| BstV1I | GCAGC | 1 cut(s) | 643 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 408 |
| BtgZI | GCGATG | 1 cut(s) | 254 |
| BtrI | CACGTC | 2 cut(s) | 14, 520 |
| BtsCI | GGATG | 2 cut(s) | 282, 938 |
| BtsIMutI | CAGTG | 2 cut(s) | 269, 914 |
| Cfr9I | CCCGGG | 1 cut(s) | 30 |
| Csp6I | GTAC | 7 cut(s) | 8, 65, 130, 454, 514, 571, 703 |
| CviAII | CATG | 3 cut(s) | 313, 359, 854 |
| CviJI | RGCY | 8 cut(s) | 72, 225, 296, 578, 802, 842, 962, 971 |
| CviKI_1 | RGCY | 8 cut(s) | 72, 225, 296, 578, 802, 842, 962, 971 |
| CviQI | GTAC | 7 cut(s) | 8, 65, 130, 454, 514, 571, 703 |
| DdeI | CTNAG | 5 cut(s) | 21, 261, 457, 527, 917 |
| DpnI | GATC | 3 cut(s) | 337, 434, 612 |
| DpnII | GATC | 3 cut(s) | 335, 432, 610 |
| DraIII | CACNNNGTG | 1 cut(s) | 920 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 94 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 94 |
| Eam1104I | CTCTTC | 2 cut(s) | 646, 660 |
| EarI | CTCTTC | 2 cut(s) | 646, 660 |
| Eco32I | GATATC | 2 cut(s) | 283, 939 |
| Eco88I | CYCGRG | 1 cut(s) | 30 |
| EcoRV | GATATC | 2 cut(s) | 283, 939 |
| FaeI | CATG | 3 cut(s) | 316, 362, 857 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 814, 846 |
| FatI | CATG | 3 cut(s) | 312, 358, 853 |
| FauI | CCCGC | 2 cut(s) | 48, 554 |
| Fnu4HI | GCNGC | 1 cut(s) | 657 |
| FokI | GGATG | 2 cut(s) | 289, 945 |
| Fsp4HI | GCNGC | 1 cut(s) | 657 |
| FspBI | CTAG | 2 cut(s) | 297, 963 |
| GluI | GCNGC | 1 cut(s) | 657 |
| HapII | CCGG | 2 cut(s) | 31, 537 |
| Hin1II | CATG | 3 cut(s) | 316, 362, 857 |
| HincII | GTYRAC | 1 cut(s) | 871 |
| HindII | GTYRAC | 1 cut(s) | 871 |
| HinfI | GANTC | 5 cut(s) | 88, 301, 317, 594, 668 |
| HpaI | GTTAAC | 1 cut(s) | 871 |
| HpaII | CCGG | 2 cut(s) | 31, 537 |
| HphI | GGTGA | 3 cut(s) | 114, 526, 808 |
| Hpy166II | GTNNAC | 2 cut(s) | 812, 871 |
| Hpy188I | TCNGA | 5 cut(s) | 22, 154, 322, 528, 727 |
| Hpy188III | TCNNGA | 2 cut(s) | 614, 672 |
| Hpy8I | GTNNAC | 2 cut(s) | 812, 871 |
| Hpy99I | CGWCG | 4 cut(s) | 15, 510, 521, 808 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyCH4III | ACNGT | 1 cut(s) | 816 |
| HpyCH4IV | ACGT | 2 cut(s) | 13, 519 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 968 |
| HpyF3I | CTNAG | 5 cut(s) | 21, 261, 457, 527, 917 |
| HpySE526I | ACGT | 2 cut(s) | 13, 519 |
| Hsp92II | CATG | 3 cut(s) | 316, 362, 857 |
| KspAI | GTTAAC | 1 cut(s) | 871 |
| Kzo9I | GATC | 3 cut(s) | 335, 432, 610 |
| LpnPI | CCDG | 9 cut(s) | 44, 87, 259, 550, 592, 593, 605, 915, 953 |
| Lsp1109I | GCAGC | 1 cut(s) | 643 |
| LweI | GCATC | 1 cut(s) | 277 |
| MaeI | CTAG | 2 cut(s) | 297, 963 |
| MaeII | ACGT | 2 cut(s) | 13, 519 |
| MalI | GATC | 3 cut(s) | 337, 434, 612 |
| MboI | GATC | 3 cut(s) | 335, 432, 610 |
| MboII | GAAGA | 5 cut(s) | 129, 424, 633, 677, 702 |
| MhlI | GDGCHC | 4 cut(s) | 152, 197, 725, 770 |
| MluCI | AATT | 5 cut(s) | 201, 307, 428, 774, 862 |
| MlyI | GAGTC | 3 cut(s) | 82, 588, 677 |
| MseI | TTAA | 5 cut(s) | 189, 762, 846, 870, 973 |
| MspI | CCGG | 2 cut(s) | 31, 537 |
| MspR9I | CCNGG | 3 cut(s) | 31, 32, 538 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 968 |
| NciI | CCSGG | 3 cut(s) | 31, 32, 538 |
| NdeII | GATC | 3 cut(s) | 335, 432, 610 |
| NlaIII | CATG | 3 cut(s) | 316, 362, 857 |
| NlaIV | GGNNCC | 2 cut(s) | 478, 631 |
| NspI | RCATGY | 1 cut(s) | 362 |
| PfeI | GAWTC | 2 cut(s) | 301, 317 |
| PkrI | GCNGC | 1 cut(s) | 658 |
| PleI | GAGTC | 3 cut(s) | 82, 588, 676 |
| PpsI | GAGTC | 3 cut(s) | 82, 588, 676 |
| PspN4I | GGNNCC | 2 cut(s) | 478, 631 |
| RsaI | GTAC | 7 cut(s) | 9, 66, 131, 455, 515, 572, 704 |
| RsaNI | GTAC | 7 cut(s) | 8, 65, 130, 454, 514, 571, 703 |
| SaqAI | TTAA | 5 cut(s) | 189, 762, 846, 870, 973 |
| SatI | GCNGC | 1 cut(s) | 657 |
| Sau3AI | GATC | 3 cut(s) | 335, 432, 610 |
| SchI | GAGTC | 3 cut(s) | 82, 588, 677 |
| ScrFI | CCNGG | 3 cut(s) | 31, 32, 538 |
| SduI | GDGCHC | 4 cut(s) | 152, 197, 725, 770 |
| SfaNI | GCATC | 1 cut(s) | 277 |
| SmaI | CCCGGG | 1 cut(s) | 32 |
| Sse9I | AATT | 5 cut(s) | 201, 307, 428, 774, 862 |
| SsiI | CCGC | 2 cut(s) | 41, 547 |
| SspI | AATATT | 2 cut(s) | 213, 786 |
| SspMI | CTAG | 2 cut(s) | 297, 963 |
| StyD4I | CCNGG | 3 cut(s) | 29, 30, 536 |
| TaaI | ACNGT | 1 cut(s) | 816 |
| TaiI | ACGT | 2 cut(s) | 16, 522 |
| TaqI | TCGA | 5 cut(s) | 98, 285, 329, 663, 671 |
| TasI | AATT | 5 cut(s) | 201, 307, 428, 774, 862 |
| TatI | WGTACW | 3 cut(s) | 64, 453, 570 |
| TfiI | GAWTC | 2 cut(s) | 301, 317 |
| Tru1I | TTAA | 5 cut(s) | 189, 762, 846, 870, 973 |
| Tru9I | TTAA | 5 cut(s) | 189, 762, 846, 870, 973 |
| TscAI | CASTG | 2 cut(s) | 269, 921 |
| TseI | GCWGC | 1 cut(s) | 656 |
| TspGWI | ACGGA | 2 cut(s) | 355, 523 |
| TspMI | CCCGGG | 1 cut(s) | 30 |
| TspRI | CASTG | 2 cut(s) | 269, 921 |
| XceI | RCATGY | 1 cut(s) | 362 |
| XmaI | CCCGGG | 1 cut(s) | 30 |
| XspI | CTAG | 2 cut(s) | 297, 963 |