FvH4_1g24270

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0016029
Physical Location & Seq
Reverse (-)
16138056 .. 16141515
3460 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g24270.t1

Sequence Viewer

Length: 1566 bp
ATGGACGACATCTCCCGACGACGGAAGCTCACCTCTCGCCAACGACGATCATGGTGCTGCTCCTTCACCGTCCCGCCTTCCAGCCCCGACTCCCTCGCAAACCCTAAGCTCTCCTCCAAGCCCCTCCACAAGCTCGACGCCTCCGTCCCCAGCTCCCCCGGCAGCGCCAAATCCGGCCTCAGCTTAGTCGGCCGGATCGACCCCCGTCGGATCCTCTCCCCGGGTCGGGTCTCCCCTATCGACTCCAGCCCGATCCAGCTACTCGGCCCCGCCCCGTCGCCTCCGCCGCCCGCCGTCGCTAGATCCGAGAGCTTGCCCCGGGTCCGACCCGAGAGCAGCGGTGTGTTCGATGTGAGGTTGAATTTGAGAGGGAAGAGGGGTGGGGGTTTGGTTCTGGAGCTCAGCTCGGAAGTTCTGAGCTCGAATTCGGAGCTCTTCGCCGGGTTGATCAGTGAGTATAGGAAGAGTGGTGCCGGGTCTTCTTCGGGTTCGAAAATGTGTCGGATTGAGGTGCCGGAGGTGGAGAATTTGGGTGTGTTTCGAGAAGCCATTGAGCTCATGTTTGAGGAGGATGACATCACCAAGCGTCTGTTCAAGATTGGAGTCTTTAGAGTTATTGATGTGCTTGAGGTATCTGCTGGCATCATGTTCACTAAGGGTGTCTTGTCCTGTTTAAAATATCTTGAGGCTGTTCCTTGGACTGAGGAAGAAGAGGAGAAACTTAGGAACCTGTTTACAAGGTTTAAGTTTGATGAGGCAACAACTAGAGACATCTTGGCTAGACTTTACTTGCTTGACTCTGTGGATTCTCAACAAAACTTGTCCAGACAACTTGTTTCGTCTATCACCACTTGTACAGATGTAAATGCAAGGCATGAGCTGAAGTTGTTAGTCAGGGGTCTCCTGTGCAGAAGTTCAGTGTATGAGAAGGACCATCATGACCTAAACAAGGAAGATATCTATGGTGTATGTCGATCATGTCTGTCTTCACTAGTTAGTCTCTTTGAGGAAGCCACTGGCAACATTTCCCATCAGAAAACAGGGAAGGAGACAGGTAAGCCTATGATAGAACGTGTCTCAAGGCAGGTTGATAATATAAACTGGCTGCTAGACATCCTGCTTGATCGGCAAATGGCTGAAGATTTTGTGGATATATGGGCTGAGCAGGGAGAACTTCTTAAAATGCATGCCGATACTTCTCCTATGGTCAGGTATGAGCTGAGCCGAGTTTCCGCAATTTTGTTTGTTGCAATGGGCACCCGAAAACTGCAATGCCGGTCAGAGTCGAGATCAGGGCTTCTTCAGGCATGGTTTGGTCCAATGCTTTTGGATTTCGGTTGGCTGCAGAGATGTCGGAAGGGGCTAGACATAAAGAGTTTGGAGGAAGCTCTGGGCCAGACACTCCTTACGCTACCATTGAAGCAGCAGTATATGCTTTTTATGGAATGGTTTCGATATTTCTCAAAGCACAGCACTGACTGCCCTAACCTCAGCAAAGCCTTCCAGATATGGTGGCGTAGATCATTTCTAAGAGGCTCCGAAACATCTGCTATTGAATCCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

522

Amino Acids

58.74

Weight (kDa)

8.77

Isoelectric Point (pI)

64.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 268 - 511 5.3e-133 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016029)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G13690
fragaria_vesca FvH4_1g24270
malus_domestica MD15G1343000.v1.1
pyrus_communis pycom15g30410
rosa_chinensis RchiOBHm_Chr2g0120761
rosa_laevigata RLG00000018578 RLG00000024327
rosa_multiflora Rmu_sc0000319.1_g000008
rosa_roxburghii Rroxscaffold_2G00123110
rosa_rugosa Rorug02G0230900
rosa_samantha Rh2AG287500 Rh2BG299000 Rh2CG276900 Rh2DG312800
rosa_wichuraiana Rw2G023060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
Acc36I ACCTGC 1 cut(s) 1075
AccB1I GGYRCC 3 cut(s) 470, 511, 1256
AciI CCGC 7 cut(s) 74, 270, 284, 287, 291, 339, 1233
AclWI GGATC 5 cut(s) 203, 205, 218, 247, 297
AcoI YGGCCR 1 cut(s) 190
AcsI RAATTY 3 cut(s) 361, 424, 526
AcuI CTGAAG 3 cut(s) 902, 1158, 1286
AcyI GRCGYC 1 cut(s) 138
AfaI GTAC 1 cut(s) 856
AfiI CCNNNNNNNGG 5 cut(s) 21, 220, 225, 226, 949
AflIII ACRYGT 1 cut(s) 1072
AgsI TTSAA 4 cut(s) 361, 595, 1420, 1556
AhlI ACTAGT 1 cut(s) 991
AjuI GAANNNNNNNTTGG 2 cut(s) 575, 607
Alw21I GWGCWC 4 cut(s) 402, 422, 435, 558
Alw26I GTCTC 6 cut(s) 235, 762, 905, 1004, 1043, 1081
AlwI GGATC 5 cut(s) 203, 205, 218, 247, 297
Ama87I CYCGRG 3 cut(s) 220, 318, 329
AoxI GGCC 4 cut(s) 175, 190, 265, 1393
ApeKI GCWGC 6 cut(s) 57, 162, 336, 1105, 1342, 1423
ApoI RAATTY 3 cut(s) 361, 424, 526
Asp700I GAANNNNTTC 1 cut(s) 1449
AspLEI GCGC 1 cut(s) 167
AspS9I GGNCC 5 cut(s) 266, 322, 931, 1316, 1393
AsuC2I CCSGG 7 cut(s) 159, 221, 222, 319, 320, 442, 475
AsuHPI GGTGA 4 cut(s) 22, 58, 571, 838
AsuII TTCGAA 1 cut(s) 491
AvaI CYCGRG 3 cut(s) 220, 318, 329
AvaII GGWCC 3 cut(s) 322, 931, 1316
BaeGI GKGCMC 1 cut(s) 1259
BamHI GGATCC 1 cut(s) 210
BanI GGYRCC 3 cut(s) 470, 511, 1256
BanII GRGCYC 4 cut(s) 402, 422, 435, 558
BbsI GAAGAC 2 cut(s) 471, 978
Bbv12I GWGCWC 4 cut(s) 402, 422, 435, 558
BbvCI CCTCAGC 2 cut(s) 179, 1490
BbvI GCAGC 6 cut(s) 44, 174, 348, 1092, 1329, 1435
BccI CCATC 2 cut(s) 942, 1038
BceAI ACGGC 1 cut(s) 278
BcgI CGANNNNNNTGC 6 cut(s) 36, 70, 1334, 1368, 1529, 1563
BclI TGATCA 1 cut(s) 447
BcnI CCSGG 7 cut(s) 159, 221, 222, 319, 320, 442, 475
BcoDI GTCTC 6 cut(s) 235, 762, 905, 1004, 1043, 1081
BcuI ACTAGT 1 cut(s) 991
BfaI CTAG 6 cut(s) 300, 765, 780, 992, 1109, 1364
BfmI CTRYAG 1 cut(s) 1343
BfoI RGCGCY 1 cut(s) 168
BfuAI ACCTGC 1 cut(s) 1075
BisI GCNGC 7 cut(s) 58, 163, 287, 337, 1106, 1343, 1424
BlpI GCTNAGC 3 cut(s) 401, 1161, 1220
BlsI GCNGC 7 cut(s) 59, 164, 288, 338, 1107, 1344, 1425
Bme1390I CCNGG 7 cut(s) 159, 221, 222, 319, 320, 442, 475
Bme18I GGWCC 3 cut(s) 322, 931, 1316
BmeT110I CYCGRG 3 cut(s) 220, 318, 329
BmgT120I GGNCC 5 cut(s) 266, 322, 931, 1316, 1393
BmiI GGNNCC 8 cut(s) 212, 268, 323, 472, 513, 728, 1258, 1537
BmrFI CCNGG 7 cut(s) 159, 221, 222, 319, 320, 442, 475
BmsI GCATC 1 cut(s) 651
BoxI GACNNNNGTC 1 cut(s) 204
BpiI GAAGAC 2 cut(s) 471, 978
BplI GAGNNNNNCTC 2 cut(s) 389, 421
BpmI CTGGAG 2 cut(s) 229, 416
Bpu10I CCTNAGC 3 cut(s) 105, 179, 1490
Bpu1102I GCTNAGC 3 cut(s) 401, 1161, 1220
Bpu14I TTCGAA 1 cut(s) 491
BpuEI CTTGAG 3 cut(s) 647, 704, 1063
BpuMI CCSGG 7 cut(s) 159, 221, 222, 319, 320, 442, 475
BsaHI GRCGYC 1 cut(s) 138
BsaI GGTCTC 2 cut(s) 235, 905
BsaJI CCNNGG 6 cut(s) 157, 219, 220, 317, 318, 695
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 5 cut(s) 21, 220, 225, 226, 949
Bse118I RCCGGY 1 cut(s) 1275
Bse1I ACTGG 2 cut(s) 1021, 1106
Bse3DI GCAATG 2 cut(s) 1257, 1277
BseDI CCNNGG 6 cut(s) 157, 219, 220, 317, 318, 695
BseGI GGATG 2 cut(s) 577, 1113
BseLI CCNNNNNNNGG 5 cut(s) 21, 220, 225, 226, 949
BseMI GCAATG 2 cut(s) 1257, 1277
BseMII CTCAG 7 cut(s) 193, 407, 415, 693, 1152, 1211, 1504
BseNI ACTGG 2 cut(s) 1021, 1106
BseRI GAGGAG 3 cut(s) 103, 581, 728
BseSI GKGCMC 1 cut(s) 1259
BseX3I CGGCCG 1 cut(s) 190
BseXI GCAGC 6 cut(s) 44, 174, 348, 1092, 1329, 1435
BseYI CCCAGC 1 cut(s) 149
BsgI GTGCAG 1 cut(s) 928
Bsh1285I CGRYCG 1 cut(s) 193
BshFI GGCC 4 cut(s) 177, 192, 267, 1395
BshNI GGYRCC 3 cut(s) 470, 511, 1256
BsiEI CGRYCG 1 cut(s) 193
BsiHKAI GWGCWC 4 cut(s) 402, 422, 435, 558
BsiHKCI CYCGRG 3 cut(s) 220, 318, 329
BsiSI CCGG 9 cut(s) 159, 174, 193, 221, 319, 441, 474, 515, 1276
BslFI GGGAC 2 cut(s) 56, 131
BslI CCNNNNNNNGG 5 cut(s) 21, 220, 225, 226, 949
BsmAI GTCTC 6 cut(s) 235, 762, 905, 1004, 1043, 1081
BsmFI GGGAC 2 cut(s) 56, 131
BsnI GGCC 4 cut(s) 177, 192, 267, 1395
Bso31I GGTCTC 2 cut(s) 235, 905
BsoBI CYCGRG 3 cut(s) 220, 318, 329
Bsp119I TTCGAA 1 cut(s) 491
Bsp1286I GDGCHC 5 cut(s) 402, 422, 435, 558, 1259
Bsp1407I TGTACA 1 cut(s) 854
Bsp1720I GCTNAGC 3 cut(s) 401, 1161, 1220
BspACI CCGC 7 cut(s) 74, 270, 284, 287, 291, 339, 1233
BspANI GGCC 4 cut(s) 177, 192, 267, 1395
BspCNI CTCAG 7 cut(s) 192, 408, 414, 694, 1153, 1212, 1503
BspHI TCATGA 1 cut(s) 937
BspLI GGNNCC 8 cut(s) 212, 268, 323, 472, 513, 728, 1258, 1537
BspMAI CTGCAG 1 cut(s) 1347
BspMI ACCTGC 1 cut(s) 1075
BspPI GGATC 5 cut(s) 203, 205, 218, 247, 297
BspQI GCTCTTC 1 cut(s) 440
BspT104I TTCGAA 1 cut(s) 491
BspT107I GGYRCC 3 cut(s) 470, 511, 1256
BspTNI GGTCTC 2 cut(s) 235, 905
BsrDI GCAATG 2 cut(s) 1257, 1277
BsrFI RCCGGY 1 cut(s) 1275
BsrGI TGTACA 1 cut(s) 854
BsrI ACTGG 2 cut(s) 1021, 1106
BssAI RCCGGY 1 cut(s) 1275
BssECI CCNNGG 6 cut(s) 157, 219, 220, 317, 318, 695
BssNI GRCGYC 1 cut(s) 138
BssT1I CCWWGG 1 cut(s) 695
Bst4CI ACNGT 1 cut(s) 70
Bst6I CTCTTC 4 cut(s) 368, 440, 458, 705
BstACI GRCGYC 1 cut(s) 138
BstAPI GCANNNNNTGC 2 cut(s) 1432, 1479
BstAUI TGTACA 1 cut(s) 854
BstBI TTCGAA 1 cut(s) 491
BstC8I GCNNGC 4 cut(s) 291, 314, 640, 1188
BstENI CCTNNNNNAGG 1 cut(s) 947
BstF5I GGATG 2 cut(s) 577, 1113
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 1 cut(s) 167
BstMAI GTCTC 6 cut(s) 235, 762, 905, 1004, 1043, 1081
BstMCI CGRYCG 1 cut(s) 193
BstMWI GCNNNNNNNGC 6 cut(s) 159, 189, 286, 1126, 1432, 1479
BstNSI RCATGY 1 cut(s) 1190
BstPAI GACNNNNGTC 1 cut(s) 204
BstSCI CCNGG 7 cut(s) 157, 219, 220, 317, 318, 440, 473
BstSFI CTRYAG 1 cut(s) 1343
BstSLI GKGCMC 1 cut(s) 1259
BstV1I GCAGC 6 cut(s) 44, 174, 348, 1092, 1329, 1435
BstV2I GAAGAC 2 cut(s) 471, 978
BstX2I RGATCY 2 cut(s) 210, 302
BstYI RGATCY 2 cut(s) 210, 302
BstZI CGGCCG 1 cut(s) 190
BsuRI GGCC 4 cut(s) 177, 192, 267, 1395
BtsCI GGATG 2 cut(s) 577, 1113
BtsIMutI CAGTG 4 cut(s) 457, 924, 1014, 1473
BveI ACCTGC 1 cut(s) 1075
Cac8I GCNNGC 4 cut(s) 291, 314, 640, 1188
CciI TCATGA 1 cut(s) 937
CfoI GCGC 1 cut(s) 167
Cfr10I RCCGGY 1 cut(s) 1275
Cfr13I GGNCC 5 cut(s) 266, 322, 931, 1316, 1393
Cfr9I CCCGGG 2 cut(s) 220, 318
CseI GACGC 2 cut(s) 146, 575
Csp6I GTAC 1 cut(s) 855
CviAII CATG 8 cut(s) 51, 559, 646, 875, 938, 978, 1187, 1308
CviQI GTAC 1 cut(s) 855
DraI TTTAAA 1 cut(s) 675
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 1 cut(s) 190
EagI CGGCCG 1 cut(s) 190
Eam1104I CTCTTC 4 cut(s) 368, 440, 458, 705
EarI CTCTTC 4 cut(s) 368, 440, 458, 705
EciI GGCGGA 1 cut(s) 273
Ecl136II GAGCTC 4 cut(s) 400, 420, 433, 556
EclXI CGGCCG 1 cut(s) 190
Eco130I CCWWGG 1 cut(s) 695
Eco24I GRGCYC 4 cut(s) 402, 422, 435, 558
Eco31I GGTCTC 2 cut(s) 235, 905
Eco32I GATATC 1 cut(s) 958
Eco47I GGWCC 3 cut(s) 322, 931, 1316
Eco52I CGGCCG 1 cut(s) 190
Eco53kI GAGCTC 4 cut(s) 400, 420, 433, 556
Eco57I CTGAAG 3 cut(s) 902, 1158, 1286
Eco88I CYCGRG 3 cut(s) 220, 318, 329
EcoICRI GAGCTC 4 cut(s) 400, 420, 433, 556
EcoNI CCTNNNNNAGG 1 cut(s) 947
EcoRI GAATTC 1 cut(s) 424
EcoRV GATATC 1 cut(s) 958
EcoT14I CCWWGG 1 cut(s) 695
EcoT22I ATGCAT 1 cut(s) 1188
EcoT38I GRGCYC 4 cut(s) 402, 422, 435, 558
ErhI CCWWGG 1 cut(s) 695
FaeI CATG 8 cut(s) 54, 562, 649, 878, 941, 981, 1190, 1311
FalI AAGNNNNNCTT 2 cut(s) 647, 679
FaqI GGGAC 2 cut(s) 56, 131
FatI CATG 8 cut(s) 50, 558, 645, 874, 937, 977, 1186, 1307
FauI CCCGC 3 cut(s) 81, 277, 298
FbaI TGATCA 1 cut(s) 447
Fnu4HI GCNGC 7 cut(s) 58, 163, 287, 337, 1106, 1343, 1424
FokI GGATG 2 cut(s) 584, 1100
FriOI GRGCYC 4 cut(s) 402, 422, 435, 558
Fsp4HI GCNGC 7 cut(s) 58, 163, 287, 337, 1106, 1343, 1424
FspBI CTAG 6 cut(s) 300, 765, 780, 992, 1109, 1364
GlaI GCGC 1 cut(s) 166
GluI GCNGC 7 cut(s) 58, 163, 287, 337, 1106, 1343, 1424
GsaI CCCAGC 1 cut(s) 153
GsuI CTGGAG 2 cut(s) 229, 416
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 4 cut(s) 177, 192, 267, 1395
HapII CCGG 9 cut(s) 159, 174, 193, 221, 319, 441, 474, 515, 1276
HgaI GACGC 2 cut(s) 146, 575
HhaI GCGC 1 cut(s) 167
Hin1I GRCGYC 1 cut(s) 138
Hin1II CATG 8 cut(s) 54, 562, 649, 878, 941, 981, 1190, 1311
Hin6I GCGC 1 cut(s) 165
HinP1I GCGC 1 cut(s) 165
HinfI GANTC 7 cut(s) 89, 242, 603, 797, 806, 1283, 1556
HpaII CCGG 9 cut(s) 159, 174, 193, 221, 319, 441, 474, 515, 1276
HphI GGTGA 4 cut(s) 22, 58, 571, 838
Hpy166II GTNNAC 2 cut(s) 651, 735
Hpy8I GTNNAC 2 cut(s) 651, 735
Hpy99I CGWCG 7 cut(s) 21, 24, 48, 140, 210, 280, 299
HpyAV CCTTC 6 cut(s) 73, 87, 922, 1039, 1351, 1510
HpyCH4III ACNGT 1 cut(s) 70
HpyCH4IV ACGT 1 cut(s) 1072
HpyCH4V TGCA 6 cut(s) 869, 909, 1186, 1250, 1270, 1345
HpyF10VI GCNNNNNNNGC 6 cut(s) 159, 189, 286, 1126, 1432, 1479
HpySE526I ACGT 1 cut(s) 1072
Hsp92I GRCGYC 1 cut(s) 138
Hsp92II CATG 8 cut(s) 54, 562, 649, 878, 941, 981, 1190, 1311
HspAI GCGC 1 cut(s) 165
Ksp22I TGATCA 1 cut(s) 447
LguI GCTCTTC 1 cut(s) 440
LmnI GCTCC 5 cut(s) 65, 158, 397, 430, 1541
Lsp1109I GCAGC 6 cut(s) 44, 174, 348, 1092, 1329, 1435
LweI GCATC 1 cut(s) 651
MaeI CTAG 6 cut(s) 300, 765, 780, 992, 1109, 1364
MaeII ACGT 1 cut(s) 1072
MflI RGATCY 2 cut(s) 210, 302
MhlI GDGCHC 5 cut(s) 402, 422, 435, 558, 1259
MluCI AATT 4 cut(s) 361, 424, 526, 1236
MlyI GAGTC 5 cut(s) 83, 236, 612, 791, 1292
MmeI TCCRAC 4 cut(s) 188, 349, 482, 1334
Mph1103I ATGCAT 1 cut(s) 1188
MroXI GAANNNNTTC 1 cut(s) 1449
MseI TTAA 3 cut(s) 674, 744, 1179
MspA1I CMGCKG 1 cut(s) 339
MspI CCGG 9 cut(s) 159, 174, 193, 221, 319, 441, 474, 515, 1276
MspR9I CCNGG 7 cut(s) 159, 221, 222, 319, 320, 442, 475
MwoI GCNNNNNNNGC 6 cut(s) 159, 189, 286, 1126, 1432, 1479
NciI CCSGG 7 cut(s) 159, 221, 222, 319, 320, 442, 475
NlaIII CATG 8 cut(s) 54, 562, 649, 878, 941, 981, 1190, 1311
NlaIV GGNNCC 8 cut(s) 212, 268, 323, 472, 513, 728, 1258, 1537
NmeAIII GCCGAG 2 cut(s) 243, 1250
NsiI ATGCAT 1 cut(s) 1188
NspI RCATGY 1 cut(s) 1190
NspV TTCGAA 1 cut(s) 491
PaeI GCATGC 1 cut(s) 1190
PagI TCATGA 1 cut(s) 937
PciSI GCTCTTC 1 cut(s) 440
PcsI WCGNNNNNNNCGW 4 cut(s) 43, 141, 195, 303
PdmI GAANNNNTTC 1 cut(s) 1449
PfeI GAWTC 2 cut(s) 806, 1556
PkrI GCNGC 7 cut(s) 59, 164, 288, 338, 1107, 1344, 1425
PleI GAGTC 5 cut(s) 83, 236, 611, 791, 1291
PpsI GAGTC 5 cut(s) 83, 236, 611, 791, 1291
PshAI GACNNNNGTC 1 cut(s) 204
Psp124BI GAGCTC 4 cut(s) 402, 422, 435, 558
PspFI CCCAGC 1 cut(s) 149
PspN4I GGNNCC 8 cut(s) 212, 268, 323, 472, 513, 728, 1258, 1537
PspPI GGNCC 5 cut(s) 266, 322, 931, 1316, 1393
PstI CTGCAG 1 cut(s) 1347
PsuI RGATCY 2 cut(s) 210, 302
RsaI GTAC 1 cut(s) 856
RsaNI GTAC 1 cut(s) 855
SacI GAGCTC 4 cut(s) 402, 422, 435, 558
SapI GCTCTTC 1 cut(s) 440
SaqAI TTAA 3 cut(s) 674, 744, 1179
SatI GCNGC 7 cut(s) 58, 163, 287, 337, 1106, 1343, 1424
Sau96I GGNCC 5 cut(s) 266, 322, 931, 1316, 1393
SchI GAGTC 5 cut(s) 83, 236, 612, 791, 1292
ScrFI CCNGG 7 cut(s) 159, 221, 222, 319, 320, 442, 475
SduI GDGCHC 5 cut(s) 402, 422, 435, 558, 1259
SfaNI GCATC 1 cut(s) 651
SfcI CTRYAG 1 cut(s) 1343
SfuI TTCGAA 1 cut(s) 491
SinI GGWCC 3 cut(s) 322, 931, 1316
SmaI CCCGGG 2 cut(s) 222, 320
SmlI CTYRAG 3 cut(s) 626, 683, 1078
SmoI CTYRAG 3 cut(s) 626, 683, 1078
SpeI ACTAGT 1 cut(s) 991
SphI GCATGC 1 cut(s) 1190
Sse9I AATT 4 cut(s) 361, 424, 526, 1236
SsiI CCGC 7 cut(s) 74, 270, 284, 287, 291, 339, 1233
SspMI CTAG 6 cut(s) 300, 765, 780, 992, 1109, 1364
SstI GAGCTC 4 cut(s) 402, 422, 435, 558
StyD4I CCNGG 7 cut(s) 157, 219, 220, 317, 318, 440, 473
StyI CCWWGG 1 cut(s) 695
TaaI ACNGT 1 cut(s) 70
TaiI ACGT 1 cut(s) 1075
TasI AATT 4 cut(s) 361, 424, 526, 1236
TatI WGTACW 1 cut(s) 854
TauI GCSGC 1 cut(s) 289
TfiI GAWTC 2 cut(s) 806, 1556
Tru1I TTAA 3 cut(s) 674, 744, 1179
Tru9I TTAA 3 cut(s) 674, 744, 1179
TscAI CASTG 4 cut(s) 457, 924, 1021, 1480
TseI GCWGC 6 cut(s) 57, 162, 336, 1105, 1342, 1423
TspGWI ACGGA 2 cut(s) 37, 133
TspMI CCCGGG 2 cut(s) 220, 318
TspRI CASTG 4 cut(s) 457, 924, 1021, 1480
VpaK11BI GGWCC 3 cut(s) 322, 931, 1316
XagI CCTNNNNNAGG 1 cut(s) 947
XapI RAATTY 3 cut(s) 361, 424, 526
XceI RCATGY 1 cut(s) 1190
XmaI CCCGGG 2 cut(s) 220, 318
XmnI GAANNNNTTC 1 cut(s) 1449
XspI CTAG 6 cut(s) 300, 765, 780, 992, 1109, 1364
Zsp2I ATGCAT 1 cut(s) 1188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.