RchiOBHm_Chr2g0120761

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0016029
Physical Location & Seq
Reverse (-)
33583582 .. 33586491
2910 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49334

Sequence Viewer

Length: 1620 bp
ATGGACGACATCTCCCGACGAAAGCAGCTGATGAGCTCTCGCCGACGATCATGGTGCTGCTCATTCACAGACCCACCCTCAAGCCCCGAATCCTTCTCGAACCCTAAACTCTCCAAACCCCTCCAAAAGTTGGACACTTTCTCCAAACCCAACTCCAACTCCGTCCCCAGCTCCCCACAGAGCACCAAATCCGGGCTCAGCCTGGTGGGCCGGATCGACCCCCGTCGGATCTTGTCCCCGGGTCGCGTCTCCCCAATCGATTCCAGCCCGATCCAGCAACTGGGCCCCGCCCCAGCTCCTCCTCCGCCTCCCGCCGCCGCCCAGATGAGATCCCAGAGCTTCCGGGCCCCGGCCCAGGTGAGAGCCGAGAGCGTGTCGAGCTCCGAGTGCAATGTGTTCGATGTGAGGTTGAATTTGAGAGGGAAAAGGGGCGGGGGCTTGGTTCTTGAGCTCAGCTCCGAGGTTCTGAGTTCCAATTCGGAGCTTTTCGCCGGATTGATCGGTGAGTACAGAAAGAGTAACAATGGGTCGTCGTCTTCGGGGTCGAAAATGTGTCGAATTGAGGTACCTGAGGTGGAGAATTTGTCAGTTTTTAGAGAAGCCATTGAGCTCATGTTTGAGGATGATGACATCACCAAGCGCCTCTTCAGGATTGGGGTGTATAGGGTTATTGATGTGCTTGAGGTATCTGCAGGCATCATGTTCACTAAGGGTGTCTTGTCCTGTTTAAAATATCTTGAGGCTGTTCCTTGGACTGAGGAAGAAGAGGAGAAACTTAGGAACCTGTTTACGAGGTTTAAGTTTGATGAGGCAACGACTAGAGACATCTTGGCCAGACTTTACTTGCTTGACTCTGTCGATTCTCAACAAAACTTATCCAGACAGCTTGTTTCATCTATCACCACTTGTACAGATGCAAATGCAAGGCATGAGCTGAAGTTGTTAGTCAAGGGTCTCCTGTGCAGAAGTTCAGTGTATGAGAAGGGTCATCATGACCTAAATAAGGAAGATATTTACGGTGTATGTCGATCATGTCTGTGTTCACTAGTTAGTCTCTTTGAGGAGGCCACTGGCAACATTTCTCATCAGAAAACTGTGAAGGAGACAGGTAAGCCTATGATAGAACGTGTCTCAAGGCAGGTTGATAATATCAACTGGCTGCTGGACATCCTGCTTGATCGGCAAATGGCTGAAGATTTTGTGGATATATGGGCCGAGCAGGGAGAACTTCTTAAAATGCATGGCGATACTTCTCCTATGGTCAGGTATGAGCTGAGCCGAGTTTCTGCAATTTTGTTTGTTGCAATGGGGACCCGAAAACTACAATGCCGGTCAGAGTCGAGATCAGGGCTTCTTCAGGCATGGTTTGGTCCAATGCTTTTGGATTTTGGTTGGCTGCAGAGATGTCGGAAGGGCCTTGACATAAAGAGTTTGGAGGAAGCTCTGGGTCAGACACTCCTTACGCTACCATTGAAGCAGCAGTATATGCTTTTTATGGAATGGTTTCGATATTTCTCAAAGCACAGCACCGACTGCCCTAACCTCAGCAAAGCCTTCCAGATATGGTGGCGTAGATCATTTCTACGAGGCTCCGAAACTTCTGCTATTGAATCCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

539

Amino Acids

60.91

Weight (kDa)

8.69

Isoelectric Point (pI)

65.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 286 - 529 1.3e-132 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016029)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G13690
fragaria_vesca FvH4_1g24270
malus_domestica MD15G1343000.v1.1
pyrus_communis pycom15g30410
rosa_chinensis RchiOBHm_Chr2g0120761
rosa_laevigata RLG00000018578 RLG00000024327
rosa_multiflora Rmu_sc0000319.1_g000008
rosa_roxburghii Rroxscaffold_2G00123110
rosa_rugosa Rorug02G0230900
rosa_samantha Rh2AG287500 Rh2BG299000 Rh2CG276900 Rh2DG312800
rosa_wichuraiana Rw2G023060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1129
Acc65I GGTACC 1 cut(s) 565
AccB1I GGYRCC 1 cut(s) 565
AccB7I CCANNNNNTGG 2 cut(s) 130, 280
AccII CGCG 1 cut(s) 246
AciI CCGC 6 cut(s) 288, 305, 312, 315, 318, 432
AclWI GGATC 4 cut(s) 221, 236, 265, 324
AcoI YGGCCR 1 cut(s) 831
AcsI RAATTY 2 cut(s) 412, 580
AcuI CTGAAG 4 cut(s) 631, 956, 1212, 1340
AfaI GTAC 3 cut(s) 509, 567, 910
AfiI CCNNNNNNNGG 6 cut(s) 130, 192, 280, 349, 355, 1003
AflIII ACRYGT 1 cut(s) 1126
AgsI TTSAA 3 cut(s) 412, 1474, 1610
AhlI ACTAGT 1 cut(s) 1045
AjnI CCWGG 2 cut(s) 201, 354
AjuI GAANNNNNNNTTGG 2 cut(s) 629, 661
Alw21I GWGCWC 5 cut(s) 38, 185, 383, 453, 612
Alw26I GTCTC 6 cut(s) 253, 816, 959, 1058, 1097, 1135
AlwI GGATC 4 cut(s) 221, 236, 265, 324
AlwNI CAGNNNCTG 1 cut(s) 280
Ama87I CYCGRG 1 cut(s) 238
AoxI GGCC 8 cut(s) 208, 283, 345, 351, 831, 1065, 1212, 1414
ApaI GGGCCC 2 cut(s) 287, 349
ApeKI GCWGC 5 cut(s) 25, 57, 1159, 1396, 1477
ApoI RAATTY 2 cut(s) 412, 580
Asp700I GAANNNNTTC 1 cut(s) 1503
Asp718I GGTACC 1 cut(s) 565
AspLEI GCGC 1 cut(s) 642
AsuC2I CCSGG 5 cut(s) 193, 239, 240, 344, 350
AsuHPI GGTGA 4 cut(s) 370, 515, 625, 892
AvaI CYCGRG 1 cut(s) 238
AvaII GGWCC 2 cut(s) 1311, 1370
AxyI CCTNAGG 1 cut(s) 570
BaeGI GKGCMC 2 cut(s) 287, 349
BalI TGGCCA 1 cut(s) 833
BanI GGYRCC 1 cut(s) 565
BanII GRGCYC 7 cut(s) 38, 198, 287, 349, 383, 453, 612
BbsI GAAGAC 1 cut(s) 528
Bbv12I GWGCWC 5 cut(s) 38, 185, 383, 453, 612
BbvCI CCTCAGC 1 cut(s) 1544
BbvI GCAGC 5 cut(s) 37, 44, 1146, 1383, 1489
BcgI CGANNNNNNTGC 8 cut(s) 36, 70, 379, 413, 1388, 1422, 1583, 1617
BciT130I CCWGG 2 cut(s) 203, 356
BcnI CCSGG 5 cut(s) 193, 239, 240, 344, 350
BcoDI GTCTC 6 cut(s) 253, 816, 959, 1058, 1097, 1135
BcuI ACTAGT 1 cut(s) 1045
BfaI CTAG 2 cut(s) 819, 1046
BfmI CTRYAG 2 cut(s) 690, 1397
BfoI RGCGCY 1 cut(s) 643
BfuAI ACCTGC 1 cut(s) 1129
BglI GCCNNNNNGGC 1 cut(s) 207
BisI GCNGC 7 cut(s) 26, 58, 315, 318, 1160, 1397, 1478
BlpI GCTNAGC 3 cut(s) 197, 452, 1274
BlsI GCNGC 7 cut(s) 27, 59, 316, 319, 1161, 1398, 1479
Bme1390I CCNGG 7 cut(s) 193, 203, 239, 240, 344, 350, 356
Bme18I GGWCC 2 cut(s) 1311, 1370
BmeT110I CYCGRG 1 cut(s) 238
BmiI GGNNCC 9 cut(s) 285, 286, 347, 348, 567, 782, 1312, 1313, 1591
BmrFI CCNGG 7 cut(s) 193, 203, 239, 240, 344, 350, 356
BmrI ACTGGG 1 cut(s) 290
BmsI GCATC 2 cut(s) 705, 904
BmuI ACTGGG 1 cut(s) 290
BoxI GACNNNNGTC 1 cut(s) 222
BpiI GAAGAC 1 cut(s) 528
BplI GAGNNNNNCTC 2 cut(s) 440, 472
Bpu10I CCTNAGC 1 cut(s) 1544
Bpu1102I GCTNAGC 3 cut(s) 197, 452, 1274
BpuEI CTTGAG 5 cut(s) 64, 467, 701, 758, 1117
BpuMI CCSGG 5 cut(s) 193, 239, 240, 344, 350
Bsa29I ATCGAT 1 cut(s) 258
BsaI GGTCTC 1 cut(s) 959
BsaJI CCNNGG 6 cut(s) 237, 238, 348, 354, 459, 749
BsaXI ACNNNNNCTCC 7 cut(s) 26, 125, 143, 155, 173, 569, 599
Bsc4I CCNNNNNNNGG 6 cut(s) 130, 192, 280, 349, 355, 1003
Bse118I RCCGGY 1 cut(s) 1329
Bse1I ACTGG 3 cut(s) 285, 1075, 1160
Bse21I CCTNAGG 1 cut(s) 570
Bse3DI GCAATG 2 cut(s) 397, 1311
BseBI CCWGG 2 cut(s) 203, 356
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 6 cut(s) 237, 238, 348, 354, 459, 749
BseGI GGATG 2 cut(s) 628, 1167
BseLI CCNNNNNNNGG 6 cut(s) 130, 192, 280, 349, 355, 1003
BseMI GCAATG 2 cut(s) 397, 1311
BseMII CTCAG 7 cut(s) 211, 458, 466, 561, 747, 1265, 1558
BseNI ACTGG 3 cut(s) 285, 1075, 1160
BseRI GAGGAG 4 cut(s) 288, 291, 782, 1076
BseSI GKGCMC 2 cut(s) 287, 349
BseXI GCAGC 5 cut(s) 37, 44, 1146, 1383, 1489
BseYI CCCAGC 2 cut(s) 167, 292
BsgI GTGCAG 1 cut(s) 982
Bsh1236I CGCG 1 cut(s) 246
BshFI GGCC 8 cut(s) 210, 285, 347, 353, 833, 1067, 1214, 1416
BshNI GGYRCC 1 cut(s) 565
BshVI ATCGAT 1 cut(s) 258
BsiHKAI GWGCWC 5 cut(s) 38, 185, 383, 453, 612
BsiHKCI CYCGRG 1 cut(s) 238
BsiSI CCGG 7 cut(s) 192, 211, 239, 343, 350, 492, 1330
BslFI GGGAC 3 cut(s) 149, 220, 1324
BslI CCNNNNNNNGG 6 cut(s) 130, 192, 280, 349, 355, 1003
BsmAI GTCTC 6 cut(s) 253, 816, 959, 1058, 1097, 1135
BsmBI CGTCTC 1 cut(s) 253
BsmFI GGGAC 3 cut(s) 149, 220, 1324
BsnI GGCC 8 cut(s) 210, 285, 347, 353, 833, 1067, 1214, 1416
Bso31I GGTCTC 1 cut(s) 959
BsoBI CYCGRG 1 cut(s) 238
Bsp120I GGGCCC 2 cut(s) 283, 345
Bsp1286I GDGCHC 8 cut(s) 38, 185, 198, 287, 349, 383, 453, 612
Bsp1407I TGTACA 1 cut(s) 908
Bsp1720I GCTNAGC 3 cut(s) 197, 452, 1274
BspACI CCGC 6 cut(s) 288, 305, 312, 315, 318, 432
BspANI GGCC 8 cut(s) 210, 285, 347, 353, 833, 1067, 1214, 1416
BspCNI CTCAG 7 cut(s) 210, 459, 465, 562, 748, 1266, 1557
BspDI ATCGAT 1 cut(s) 258
BspFNI CGCG 1 cut(s) 246
BspHI TCATGA 1 cut(s) 991
BspLI GGNNCC 9 cut(s) 285, 286, 347, 348, 567, 782, 1312, 1313, 1591
BspMAI CTGCAG 2 cut(s) 694, 1401
BspMI ACCTGC 1 cut(s) 1129
BspPI GGATC 4 cut(s) 221, 236, 265, 324
BspT107I GGYRCC 1 cut(s) 565
BspTNI GGTCTC 1 cut(s) 959
BsrDI GCAATG 2 cut(s) 397, 1311
BsrFI RCCGGY 1 cut(s) 1329
BsrGI TGTACA 1 cut(s) 908
BsrI ACTGG 3 cut(s) 285, 1075, 1160
BssAI RCCGGY 1 cut(s) 1329
BssECI CCNNGG 6 cut(s) 237, 238, 348, 354, 459, 749
BssT1I CCWWGG 1 cut(s) 749
Bst2UI CCWGG 2 cut(s) 203, 356
Bst4CI ACNGT 2 cut(s) 1019, 1096
Bst6I CTCTTC 2 cut(s) 650, 759
BstAPI GCANNNNNTGC 2 cut(s) 1486, 1533
BstAUI TGTACA 1 cut(s) 908
BstC8I GCNNGC 1 cut(s) 694
BstDEI CTNAG 9 cut(s) 197, 452, 467, 570, 708, 756, 776, 1274, 1544
BstENI CCTNNNNNAGG 1 cut(s) 1001
BstF5I GGATG 2 cut(s) 628, 1167
BstFNI CGCG 1 cut(s) 246
BstH2I RGCGCY 1 cut(s) 643
BstHHI GCGC 1 cut(s) 642
BstMAI GTCTC 6 cut(s) 253, 816, 959, 1058, 1097, 1135
BstMWI GCNNNNNNNGC 6 cut(s) 207, 378, 387, 1180, 1486, 1533
BstNI CCWGG 2 cut(s) 203, 356
BstPAI GACNNNNGTC 1 cut(s) 222
BstSCI CCNGG 7 cut(s) 191, 201, 237, 238, 342, 348, 354
BstSFI CTRYAG 2 cut(s) 690, 1397
BstSLI GKGCMC 2 cut(s) 287, 349
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 5 cut(s) 37, 44, 1146, 1383, 1489
BstV2I GAAGAC 1 cut(s) 528
BstX2I RGATCY 2 cut(s) 228, 329
BstYI RGATCY 2 cut(s) 228, 329
Bsu15I ATCGAT 1 cut(s) 258
Bsu36I CCTNAGG 1 cut(s) 570
BsuRI GGCC 8 cut(s) 210, 285, 347, 353, 833, 1067, 1214, 1416
BsuTUI ATCGAT 1 cut(s) 258
BtsCI GGATG 2 cut(s) 628, 1167
BtsIMutI CAGTG 2 cut(s) 978, 1068
BveI ACCTGC 1 cut(s) 1129
Cac8I GCNNGC 1 cut(s) 694
CaiI CAGNNNCTG 1 cut(s) 280
CciI TCATGA 1 cut(s) 991
CfoI GCGC 1 cut(s) 642
Cfr10I RCCGGY 1 cut(s) 1329
Cfr9I CCCGGG 1 cut(s) 238
ClaI ATCGAT 1 cut(s) 258
CseI GACGC 1 cut(s) 235
Csp6I GTAC 3 cut(s) 508, 566, 909
CviAII CATG 8 cut(s) 51, 613, 700, 929, 992, 1032, 1241, 1362
CviQI GTAC 3 cut(s) 508, 566, 909
DdeI CTNAG 9 cut(s) 197, 452, 467, 570, 708, 756, 776, 1274, 1544
DraI TTTAAA 1 cut(s) 729
EaeI YGGCCR 1 cut(s) 831
Eam1104I CTCTTC 2 cut(s) 650, 759
EarI CTCTTC 2 cut(s) 650, 759
EciI GGCGGA 1 cut(s) 294
Ecl136II GAGCTC 4 cut(s) 36, 381, 451, 610
Eco130I CCWWGG 1 cut(s) 749
Eco24I GRGCYC 7 cut(s) 38, 198, 287, 349, 383, 453, 612
Eco31I GGTCTC 1 cut(s) 959
Eco47I GGWCC 2 cut(s) 1311, 1370
Eco53kI GAGCTC 4 cut(s) 36, 381, 451, 610
Eco57I CTGAAG 4 cut(s) 631, 956, 1212, 1340
Eco81I CCTNAGG 1 cut(s) 570
Eco88I CYCGRG 1 cut(s) 238
EcoICRI GAGCTC 4 cut(s) 36, 381, 451, 610
EcoNI CCTNNNNNAGG 1 cut(s) 1001
EcoO109I RGGNCCY 4 cut(s) 284, 346, 1311, 1414
EcoRII CCWGG 2 cut(s) 201, 354
EcoT14I CCWWGG 1 cut(s) 749
EcoT22I ATGCAT 1 cut(s) 1242
EcoT38I GRGCYC 7 cut(s) 38, 198, 287, 349, 383, 453, 612
ErhI CCWWGG 1 cut(s) 749
Esp3I CGTCTC 1 cut(s) 253
FaeI CATG 8 cut(s) 54, 616, 703, 932, 995, 1035, 1244, 1365
FalI AAGNNNNNCTT 4 cut(s) 629, 661, 701, 733
FaqI GGGAC 3 cut(s) 149, 220, 1324
FatI CATG 8 cut(s) 50, 612, 699, 928, 991, 1031, 1240, 1361
FauI CCCGC 3 cut(s) 295, 319, 425
Fnu4HI GCNGC 7 cut(s) 26, 58, 315, 318, 1160, 1397, 1478
FokI GGATG 2 cut(s) 635, 1154
FriOI GRGCYC 7 cut(s) 38, 198, 287, 349, 383, 453, 612
Fsp4HI GCNGC 7 cut(s) 26, 58, 315, 318, 1160, 1397, 1478
FspBI CTAG 2 cut(s) 819, 1046
GlaI GCGC 1 cut(s) 641
GluI GCNGC 7 cut(s) 26, 58, 315, 318, 1160, 1397, 1478
GsaI CCCAGC 2 cut(s) 171, 296
HaeII RGCGCY 1 cut(s) 643
HaeIII GGCC 8 cut(s) 210, 285, 347, 353, 833, 1067, 1214, 1416
HapII CCGG 7 cut(s) 192, 211, 239, 343, 350, 492, 1330
HgaI GACGC 1 cut(s) 235
HhaI GCGC 1 cut(s) 642
Hin1II CATG 8 cut(s) 54, 616, 703, 932, 995, 1035, 1244, 1365
Hin6I GCGC 1 cut(s) 640
HinP1I GCGC 1 cut(s) 640
HinfI GANTC 6 cut(s) 89, 260, 851, 860, 1337, 1610
HpaII CCGG 7 cut(s) 192, 211, 239, 343, 350, 492, 1330
HphI GGTGA 4 cut(s) 370, 515, 625, 892
Hpy166II GTNNAC 3 cut(s) 705, 789, 1043
Hpy8I GTNNAC 3 cut(s) 705, 789, 1043
Hpy99I CGWCG 4 cut(s) 21, 48, 228, 535
HpyAV CCTTC 5 cut(s) 103, 976, 1093, 1405, 1564
HpyCH4III ACNGT 2 cut(s) 1019, 1096
HpyCH4IV ACGT 1 cut(s) 1126
HpyCH4V TGCA 9 cut(s) 390, 692, 917, 923, 963, 1240, 1289, 1304, 1399
HpyF10VI GCNNNNNNNGC 6 cut(s) 207, 378, 387, 1180, 1486, 1533
HpyF3I CTNAG 9 cut(s) 197, 452, 467, 570, 708, 756, 776, 1274, 1544
HpySE526I ACGT 1 cut(s) 1126
Hsp92II CATG 8 cut(s) 54, 616, 703, 932, 995, 1035, 1244, 1365
HspAI GCGC 1 cut(s) 640
KflI GGGWCCC 1 cut(s) 1311
KpnI GGTACC 1 cut(s) 569
LmnI GCTCC 6 cut(s) 176, 301, 386, 461, 481, 1595
Lsp1109I GCAGC 5 cut(s) 37, 44, 1146, 1383, 1489
LweI GCATC 2 cut(s) 705, 904
MaeI CTAG 2 cut(s) 819, 1046
MaeII ACGT 1 cut(s) 1126
MaeIII GTNAC 1 cut(s) 518
MboII GAAGA 7 cut(s) 528, 637, 773, 776, 1019, 1205, 1346
MflI RGATCY 2 cut(s) 228, 329
MhlI GDGCHC 8 cut(s) 38, 185, 198, 287, 349, 383, 453, 612
MlsI TGGCCA 1 cut(s) 833
MluCI AATT 5 cut(s) 412, 475, 558, 580, 1290
MluNI TGGCCA 1 cut(s) 833
MlyI GAGTC 2 cut(s) 845, 1346
MmeI TCCRAC 4 cut(s) 111, 180, 206, 1388
Mox20I TGGCCA 1 cut(s) 833
Mph1103I ATGCAT 1 cut(s) 1242
MroXI GAANNNNTTC 1 cut(s) 1503
MscI TGGCCA 1 cut(s) 833
MseI TTAA 3 cut(s) 728, 798, 1233
MslI CAYNNNNRTG 1 cut(s) 1036
Msp20I TGGCCA 1 cut(s) 833
MspA1I CMGCKG 1 cut(s) 28
MspI CCGG 7 cut(s) 192, 211, 239, 343, 350, 492, 1330
MspR9I CCNGG 7 cut(s) 193, 203, 239, 240, 344, 350, 356
MvaI CCWGG 2 cut(s) 203, 356
MvnI CGCG 1 cut(s) 246
MwoI GCNNNNNNNGC 6 cut(s) 207, 378, 387, 1180, 1486, 1533
NciI CCSGG 5 cut(s) 193, 239, 240, 344, 350
NlaIII CATG 8 cut(s) 54, 616, 703, 932, 995, 1035, 1244, 1365
NlaIV GGNNCC 9 cut(s) 285, 286, 347, 348, 567, 782, 1312, 1313, 1591
NmeAIII GCCGAG 3 cut(s) 391, 1240, 1304
NsiI ATGCAT 1 cut(s) 1242
PagI TCATGA 1 cut(s) 991
PdmI GAANNNNTTC 1 cut(s) 1503
PfeI GAWTC 4 cut(s) 89, 260, 860, 1610
PflFI GACNNNGTC 1 cut(s) 854
PflMI CCANNNNNTGG 2 cut(s) 130, 280
PkrI GCNGC 7 cut(s) 27, 59, 316, 319, 1161, 1398, 1479
PleI GAGTC 2 cut(s) 845, 1345
PpsI GAGTC 2 cut(s) 845, 1345
PpuMI RGGWCCY 1 cut(s) 1311
PshAI GACNNNNGTC 1 cut(s) 222
Psp124BI GAGCTC 4 cut(s) 38, 383, 453, 612
Psp5II RGGWCCY 1 cut(s) 1311
Psp6I CCWGG 2 cut(s) 201, 354
PspFI CCCAGC 2 cut(s) 167, 292
PspGI CCWGG 2 cut(s) 201, 354
PspN4I GGNNCC 9 cut(s) 285, 286, 347, 348, 567, 782, 1312, 1313, 1591
PspOMI GGGCCC 2 cut(s) 283, 345
PspPPI RGGWCCY 1 cut(s) 1311
PstI CTGCAG 2 cut(s) 694, 1401
PstNI CAGNNNCTG 1 cut(s) 280
PsuI RGATCY 2 cut(s) 228, 329
PsyI GACNNNGTC 1 cut(s) 854
PvuII CAGCTG 1 cut(s) 28
RsaI GTAC 3 cut(s) 509, 567, 910
RsaNI GTAC 3 cut(s) 508, 566, 909
RseI CAYNNNNRTG 1 cut(s) 1036
SacI GAGCTC 4 cut(s) 38, 383, 453, 612
SaqAI TTAA 3 cut(s) 728, 798, 1233
SatI GCNGC 7 cut(s) 26, 58, 315, 318, 1160, 1397, 1478
SchI GAGTC 2 cut(s) 845, 1346
ScrFI CCNGG 7 cut(s) 193, 203, 239, 240, 344, 350, 356
SduI GDGCHC 8 cut(s) 38, 185, 198, 287, 349, 383, 453, 612
SfaNI GCATC 2 cut(s) 705, 904
SfcI CTRYAG 2 cut(s) 690, 1397
SinI GGWCC 2 cut(s) 1311, 1370
SmaI CCCGGG 1 cut(s) 240
SmiMI CAYNNNNRTG 1 cut(s) 1036
SmlI CTYRAG 5 cut(s) 79, 446, 680, 737, 1132
SmoI CTYRAG 5 cut(s) 79, 446, 680, 737, 1132
SpeI ACTAGT 1 cut(s) 1045
Sse9I AATT 5 cut(s) 412, 475, 558, 580, 1290
SsiI CCGC 6 cut(s) 288, 305, 312, 315, 318, 432
SspMI CTAG 2 cut(s) 819, 1046
SstI GAGCTC 4 cut(s) 38, 383, 453, 612
StyD4I CCNGG 7 cut(s) 191, 201, 237, 238, 342, 348, 354
StyI CCWWGG 1 cut(s) 749
TaaI ACNGT 2 cut(s) 1019, 1096
TaiI ACGT 1 cut(s) 1129
TasI AATT 5 cut(s) 412, 475, 558, 580, 1290
TatI WGTACW 2 cut(s) 507, 908
TauI GCSGC 2 cut(s) 317, 320
TfiI GAWTC 4 cut(s) 89, 260, 860, 1610
Tru1I TTAA 3 cut(s) 728, 798, 1233
Tru9I TTAA 3 cut(s) 728, 798, 1233
TscAI CASTG 2 cut(s) 978, 1075
TseI GCWGC 5 cut(s) 25, 57, 1159, 1396, 1477
TspDTI ATGAA 1 cut(s) 882
TspGWI ACGGA 1 cut(s) 151
TspMI CCCGGG 1 cut(s) 238
TspRI CASTG 2 cut(s) 978, 1075
Tth111I GACNNNGTC 1 cut(s) 854
Van91I CCANNNNNTGG 2 cut(s) 130, 280
VpaK11BI GGWCC 2 cut(s) 1311, 1370
XagI CCTNNNNNAGG 1 cut(s) 1001
XapI RAATTY 2 cut(s) 412, 580
XmaI CCCGGG 1 cut(s) 238
XmnI GAANNNNTTC 1 cut(s) 1503
XspI CTAG 2 cut(s) 819, 1046
Zsp2I ATGCAT 1 cut(s) 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.