Rroxscaffold_2G00123110

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0016029
Physical Location & Seq
Forward (+)
56818344 .. 56821331
2988 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00123110.1

Sequence Viewer

Length: 1641 bp
ATGGATGACATCTCCCGACGAAAGCAGCTGATGAGCTCTCGCCGACGATCATGGTGTTGCTCATTCACAGACCCACCCTCAAGCCCCGAATCCTTCTCCAACCCTAAACTCTCCAAACCCCTCCAAAAGTTCGACGCTTTCTCCAAACCCAACTCCAACTCCGTCCCCAGCTCCCCACAGAGCACCAAGTCCGGGCTCAGCCTGGTGGGCCGGATCGACCCCCGTCGGATCTTGTCCCCGGGTCGCGTCTCCCCAATCGATTCCAGCCCGATCCAGCAACTGGGCCCCGCCCCATCTCCTCCTCCGCCTCCCACCGTCGATTCCGCCGCCGCCGCCGCCCAGATGAGATCCCAGAGCTTCCGGGCCCCGGCCCAGGTGAGAGCCGAGAGCGTGTCGAGCTCCGACAGCAATGTGTTCGATGTGAGGTTGAATTTGAGAGGGAAAAGGGGTGGGGGCTTGGTTCTTGAGCTCAGCTCCGAGGTTCTGAGTTCGAATTCGGAGCTTTTCGCCGGATTGATCAGTGAGTATAGAAAGAGTAATAACGGGTCGTCGTCGTCGTCGGGGTCGAAAATGTGTCGAATTGAGGTACCTGAGGTGGAGAATTTGTCAGTTTTTAGGGAAGCCATTGAGCTCATGTTTGAGGATGATGACATCACCAAGCGCCTCTTCAGGATTGGGGTGTATAGGGTTATTGATGTGCTTGAGGTATCTGCAGGCATCATGTTCACTAAGGGTGTCTTGTCCTGTTTAAAATATCTTGAGGCTGTTCCTTGGACTGAGGAAGAAGAGGAGAAACTTAGGAACCTGTTTACAAGGTTTAAGTTTGATGATGCAACAACTAGAGACATCTTGGCCAGACTTTACTTGCTTGACTCTGTCGATTCTCAACAAAACTTATCCAGACAACTTGTTTCATCTATCACCACTTGTACAGATGCAAATGCAAGGCATGAGCTGAAGTTGTTACTCAAGGGTCTCCTGTGCAGAAGTTCAGTGTATGAGAAGGATCATCATGACCTAAATAAGGAAGATATTTATGGTGTATGTCGATCATGTCTGTGTTCACTAGTTAGTCTCTTTGAGGAGGCCACTGGCAACATTTCTCATCAGAAAACTGTGAAGGAGACAGGTAAGCCTATGATAGAACGTGTCTCAAGGCAGGTTGATAATATCAACTGGCTGCTGGACATCCTGCTTGATCGGCAAATGGCTGAAGATTTTGTGGATATATGGGCCGAGCAGGGAGAACTTCTTAAAATGCATGGCGATACTTCTCCTATGGTCAGGTATGAGCTGAGTCGAGTTTCTGCAATTTTGTTTGTTGCAATGGGGACCCGAAAACTACAATGCCGGTCAGAGTCAAGATCAGGGCTTCTTCAGGCATGGTTTGGTCCAATGCTTTTGGATTTTGGTTGGCTGCAGAGATGTCGGAAGGGGCTTGACATAAAGAGTTTGGAGGAAGCTCTGGGTCAGACACTCCTTACGCTACCATTGAAGCAGCAGTACATGCTTTTTATGGAATGGTTTCGATATTTCTCAAAGCACAGCACTGACTGCCCTAACCTCAGCAAAGCCTTCCAGATATGGTGGCGTAGATCATTTCTAAGAGGCTCCGAAACTTCTGCTATTGAATCCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

546

Amino Acids

61.62

Weight (kDa)

8.5

Isoelectric Point (pI)

65.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 293 - 536 1.7e-132 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016029)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G13690
fragaria_vesca FvH4_1g24270
malus_domestica MD15G1343000.v1.1
pyrus_communis pycom15g30410
rosa_chinensis RchiOBHm_Chr2g0120761
rosa_laevigata RLG00000018578 RLG00000024327
rosa_multiflora Rmu_sc0000319.1_g000008
rosa_roxburghii Rroxscaffold_2G00123110
rosa_rugosa Rorug02G0230900
rosa_samantha Rh2AG287500 Rh2BG299000 Rh2CG276900 Rh2DG312800
rosa_wichuraiana Rw2G023060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1150
Acc65I GGTACC 1 cut(s) 586
AccB1I GGYRCC 1 cut(s) 586
AccB7I CCANNNNNTGG 1 cut(s) 280
AccII CGCG 1 cut(s) 246
AciI CCGC 7 cut(s) 288, 305, 324, 327, 330, 333, 336
AclWI GGATC 5 cut(s) 221, 236, 265, 342, 1014
AcoI YGGCCR 1 cut(s) 852
AcsI RAATTY 3 cut(s) 430, 493, 601
AcuI CTGAAG 4 cut(s) 652, 977, 1233, 1361
AfaI GTAC 3 cut(s) 588, 931, 1505
AfiI CCNNNNNNNGG 5 cut(s) 192, 280, 367, 373, 1024
AflIII ACRYGT 1 cut(s) 1147
AgsI TTSAA 3 cut(s) 430, 1495, 1631
AhlI ACTAGT 1 cut(s) 1066
AjnI CCWGG 2 cut(s) 201, 372
AjuI GAANNNNNNNTTGG 2 cut(s) 650, 682
Alw21I GWGCWC 5 cut(s) 38, 185, 401, 471, 633
Alw26I GTCTC 6 cut(s) 253, 837, 980, 1079, 1118, 1156
AlwI GGATC 5 cut(s) 221, 236, 265, 342, 1014
AlwNI CAGNNNCTG 1 cut(s) 280
Ama87I CYCGRG 1 cut(s) 238
AoxI GGCC 7 cut(s) 208, 283, 363, 369, 852, 1086, 1233
ApaI GGGCCC 2 cut(s) 287, 367
ApeKI GCWGC 4 cut(s) 25, 1180, 1417, 1498
ApoI RAATTY 3 cut(s) 430, 493, 601
Asp700I GAANNNNTTC 1 cut(s) 1524
Asp718I GGTACC 1 cut(s) 586
AspLEI GCGC 1 cut(s) 663
AspS9I GGNCC 9 cut(s) 208, 283, 284, 363, 364, 370, 1233, 1332, 1391
AsuC2I CCSGG 5 cut(s) 193, 239, 240, 362, 368
AsuHPI GGTGA 3 cut(s) 388, 646, 913
AsuII TTCGAA 1 cut(s) 491
AvaI CYCGRG 1 cut(s) 238
AvaII GGWCC 2 cut(s) 1332, 1391
AxyI CCTNAGG 1 cut(s) 591
BaeGI GKGCMC 2 cut(s) 287, 367
BalI TGGCCA 1 cut(s) 854
BanI GGYRCC 1 cut(s) 586
BanII GRGCYC 7 cut(s) 38, 198, 287, 367, 401, 471, 633
BarI GAAGNNNNNNTAC 2 cut(s) 1487, 1519
Bbv12I GWGCWC 5 cut(s) 38, 185, 401, 471, 633
BbvCI CCTCAGC 1 cut(s) 1565
BbvI GCAGC 4 cut(s) 37, 1167, 1404, 1510
BccI CCATC 1 cut(s) 301
BcgI CGANNNNNNTGC 6 cut(s) 397, 431, 1409, 1443, 1604, 1638
BciT130I CCWGG 2 cut(s) 203, 374
BclI TGATCA 1 cut(s) 516
BcnI CCSGG 5 cut(s) 193, 239, 240, 362, 368
BcoDI GTCTC 6 cut(s) 253, 837, 980, 1079, 1118, 1156
BcuI ACTAGT 1 cut(s) 1066
BfaI CTAG 2 cut(s) 840, 1067
BfmI CTRYAG 2 cut(s) 711, 1418
BfoI RGCGCY 1 cut(s) 664
BfuAI ACCTGC 1 cut(s) 1150
BglI GCCNNNNNGGC 1 cut(s) 207
BisI GCNGC 8 cut(s) 26, 327, 330, 333, 336, 1181, 1418, 1499
BlpI GCTNAGC 2 cut(s) 197, 470
BlsI GCNGC 8 cut(s) 27, 328, 331, 334, 337, 1182, 1419, 1500
Bme1390I CCNGG 7 cut(s) 193, 203, 239, 240, 362, 368, 374
Bme18I GGWCC 2 cut(s) 1332, 1391
BmeT110I CYCGRG 1 cut(s) 238
BmgT120I GGNCC 9 cut(s) 208, 283, 284, 363, 364, 370, 1233, 1332, 1391
BmiI GGNNCC 9 cut(s) 285, 286, 365, 366, 588, 803, 1333, 1334, 1612
BmrFI CCNGG 7 cut(s) 193, 203, 239, 240, 362, 368, 374
BmrI ACTGGG 1 cut(s) 290
BmsI GCATC 3 cut(s) 726, 820, 925
BmuI ACTGGG 1 cut(s) 290
BoxI GACNNNNGTC 1 cut(s) 222
BplI GAGNNNNNCTC 2 cut(s) 458, 490
Bpu10I CCTNAGC 1 cut(s) 1565
Bpu1102I GCTNAGC 2 cut(s) 197, 470
Bpu14I TTCGAA 1 cut(s) 491
BpuEI CTTGAG 6 cut(s) 64, 485, 722, 779, 953, 1138
BpuMI CCSGG 5 cut(s) 193, 239, 240, 362, 368
Bsa29I ATCGAT 1 cut(s) 258
BsaI GGTCTC 1 cut(s) 980
BsaJI CCNNGG 6 cut(s) 237, 238, 366, 372, 477, 770
BsaXI ACNNNNNCTCC 6 cut(s) 125, 143, 155, 173, 590, 620
Bsc4I CCNNNNNNNGG 5 cut(s) 192, 280, 367, 373, 1024
Bse118I RCCGGY 1 cut(s) 1350
Bse1I ACTGG 3 cut(s) 285, 1096, 1181
Bse21I CCTNAGG 1 cut(s) 591
Bse3DI GCAATG 2 cut(s) 415, 1332
BseBI CCWGG 2 cut(s) 203, 374
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 6 cut(s) 237, 238, 366, 372, 477, 770
BseGI GGATG 3 cut(s) 10, 649, 1188
BseLI CCNNNNNNNGG 5 cut(s) 192, 280, 367, 373, 1024
BseMI GCAATG 2 cut(s) 415, 1332
BseMII CTCAG 7 cut(s) 211, 476, 484, 582, 768, 1286, 1579
BseNI ACTGG 3 cut(s) 285, 1096, 1181
BseRI GAGGAG 4 cut(s) 288, 291, 803, 1097
BseSI GKGCMC 2 cut(s) 287, 367
BseXI GCAGC 4 cut(s) 37, 1167, 1404, 1510
BseYI CCCAGC 1 cut(s) 167
BsgI GTGCAG 1 cut(s) 1003
Bsh1236I CGCG 1 cut(s) 246
BshFI GGCC 7 cut(s) 210, 285, 365, 371, 854, 1088, 1235
BshNI GGYRCC 1 cut(s) 586
BshVI ATCGAT 1 cut(s) 258
BsiHKAI GWGCWC 5 cut(s) 38, 185, 401, 471, 633
BsiHKCI CYCGRG 1 cut(s) 238
BsiSI CCGG 7 cut(s) 192, 211, 239, 361, 368, 510, 1351
BslFI GGGAC 3 cut(s) 149, 220, 1345
BslI CCNNNNNNNGG 5 cut(s) 192, 280, 367, 373, 1024
BsmAI GTCTC 6 cut(s) 253, 837, 980, 1079, 1118, 1156
BsmBI CGTCTC 1 cut(s) 253
BsmFI GGGAC 3 cut(s) 149, 220, 1345
BsnI GGCC 7 cut(s) 210, 285, 365, 371, 854, 1088, 1235
Bso31I GGTCTC 1 cut(s) 980
BsoBI CYCGRG 1 cut(s) 238
Bsp119I TTCGAA 1 cut(s) 491
Bsp120I GGGCCC 2 cut(s) 283, 363
Bsp1286I GDGCHC 8 cut(s) 38, 185, 198, 287, 367, 401, 471, 633
Bsp1407I TGTACA 1 cut(s) 929
Bsp1720I GCTNAGC 2 cut(s) 197, 470
BspACI CCGC 7 cut(s) 288, 305, 324, 327, 330, 333, 336
BspANI GGCC 7 cut(s) 210, 285, 365, 371, 854, 1088, 1235
BspCNI CTCAG 7 cut(s) 210, 477, 483, 583, 769, 1287, 1578
BspDI ATCGAT 1 cut(s) 258
BspFNI CGCG 1 cut(s) 246
BspHI TCATGA 1 cut(s) 1012
BspLI GGNNCC 9 cut(s) 285, 286, 365, 366, 588, 803, 1333, 1334, 1612
BspMAI CTGCAG 2 cut(s) 715, 1422
BspMI ACCTGC 1 cut(s) 1150
BspPI GGATC 5 cut(s) 221, 236, 265, 342, 1014
BspT104I TTCGAA 1 cut(s) 491
BspT107I GGYRCC 1 cut(s) 586
BspTNI GGTCTC 1 cut(s) 980
BsrDI GCAATG 2 cut(s) 415, 1332
BsrFI RCCGGY 1 cut(s) 1350
BsrGI TGTACA 1 cut(s) 929
BsrI ACTGG 3 cut(s) 285, 1096, 1181
BssAI RCCGGY 1 cut(s) 1350
BssECI CCNNGG 6 cut(s) 237, 238, 366, 372, 477, 770
BssT1I CCWWGG 1 cut(s) 770
Bst2UI CCWGG 2 cut(s) 203, 374
Bst4CI ACNGT 2 cut(s) 316, 1117
Bst6I CTCTTC 2 cut(s) 671, 780
BstAPI GCANNNNNTGC 2 cut(s) 1507, 1554
BstAUI TGTACA 1 cut(s) 929
BstBI TTCGAA 1 cut(s) 491
BstC8I GCNNGC 1 cut(s) 715
BstENI CCTNNNNNAGG 1 cut(s) 1022
BstF5I GGATG 3 cut(s) 10, 649, 1188
BstFNI CGCG 1 cut(s) 246
BstH2I RGCGCY 1 cut(s) 664
BstHHI GCGC 1 cut(s) 663
BstMAI GTCTC 6 cut(s) 253, 837, 980, 1079, 1118, 1156
BstMWI GCNNNNNNNGC 8 cut(s) 207, 332, 335, 396, 405, 1201, 1507, 1554
BstNI CCWGG 2 cut(s) 203, 374
BstNSI RCATGY 1 cut(s) 1510
BstPAI GACNNNNGTC 1 cut(s) 222
BstSCI CCNGG 7 cut(s) 191, 201, 237, 238, 360, 366, 372
BstSFI CTRYAG 2 cut(s) 711, 1418
BstSLI GKGCMC 2 cut(s) 287, 367
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 4 cut(s) 37, 1167, 1404, 1510
BstX2I RGATCY 2 cut(s) 228, 347
BstYI RGATCY 2 cut(s) 228, 347
Bsu15I ATCGAT 1 cut(s) 258
Bsu36I CCTNAGG 1 cut(s) 591
BsuRI GGCC 7 cut(s) 210, 285, 365, 371, 854, 1088, 1235
BsuTUI ATCGAT 1 cut(s) 258
BtsCI GGATG 3 cut(s) 10, 649, 1188
BtsIMutI CAGTG 4 cut(s) 526, 999, 1089, 1548
BveI ACCTGC 1 cut(s) 1150
Cac8I GCNNGC 1 cut(s) 715
CaiI CAGNNNCTG 1 cut(s) 280
CciI TCATGA 1 cut(s) 1012
CfoI GCGC 1 cut(s) 663
Cfr10I RCCGGY 1 cut(s) 1350
Cfr13I GGNCC 9 cut(s) 208, 283, 284, 363, 364, 370, 1233, 1332, 1391
Cfr9I CCCGGG 1 cut(s) 238
ClaI ATCGAT 1 cut(s) 258
CseI GACGC 2 cut(s) 143, 235
Csp6I GTAC 3 cut(s) 587, 930, 1504
CviAII CATG 9 cut(s) 51, 634, 721, 950, 1013, 1053, 1262, 1383, 1507
CviQI GTAC 3 cut(s) 587, 930, 1504
DraI TTTAAA 1 cut(s) 750
EaeI YGGCCR 1 cut(s) 852
Eam1104I CTCTTC 2 cut(s) 671, 780
EarI CTCTTC 2 cut(s) 671, 780
EciI GGCGGA 2 cut(s) 294, 313
Ecl136II GAGCTC 4 cut(s) 36, 399, 469, 631
Eco130I CCWWGG 1 cut(s) 770
Eco24I GRGCYC 7 cut(s) 38, 198, 287, 367, 401, 471, 633
Eco31I GGTCTC 1 cut(s) 980
Eco47I GGWCC 2 cut(s) 1332, 1391
Eco53kI GAGCTC 4 cut(s) 36, 399, 469, 631
Eco57I CTGAAG 4 cut(s) 652, 977, 1233, 1361
Eco81I CCTNAGG 1 cut(s) 591
Eco88I CYCGRG 1 cut(s) 238
EcoICRI GAGCTC 4 cut(s) 36, 399, 469, 631
EcoNI CCTNNNNNAGG 1 cut(s) 1022
EcoO109I RGGNCCY 3 cut(s) 284, 364, 1332
EcoRI GAATTC 1 cut(s) 493
EcoRII CCWGG 2 cut(s) 201, 372
EcoT14I CCWWGG 1 cut(s) 770
EcoT22I ATGCAT 1 cut(s) 1263
EcoT38I GRGCYC 7 cut(s) 38, 198, 287, 367, 401, 471, 633
ErhI CCWWGG 1 cut(s) 770
Esp3I CGTCTC 1 cut(s) 253
FaeI CATG 9 cut(s) 54, 637, 724, 953, 1016, 1056, 1265, 1386, 1510
FalI AAGNNNNNCTT 4 cut(s) 650, 682, 722, 754
FaqI GGGAC 3 cut(s) 149, 220, 1345
FatI CATG 9 cut(s) 50, 633, 720, 949, 1012, 1052, 1261, 1382, 1506
FauI CCCGC 1 cut(s) 295
FbaI TGATCA 1 cut(s) 516
Fnu4HI GCNGC 8 cut(s) 26, 327, 330, 333, 336, 1181, 1418, 1499
FokI GGATG 3 cut(s) 17, 656, 1175
FriOI GRGCYC 7 cut(s) 38, 198, 287, 367, 401, 471, 633
Fsp4HI GCNGC 8 cut(s) 26, 327, 330, 333, 336, 1181, 1418, 1499
FspBI CTAG 2 cut(s) 840, 1067
GlaI GCGC 1 cut(s) 662
GluI GCNGC 8 cut(s) 26, 327, 330, 333, 336, 1181, 1418, 1499
GsaI CCCAGC 1 cut(s) 171
HaeII RGCGCY 1 cut(s) 664
HaeIII GGCC 7 cut(s) 210, 285, 365, 371, 854, 1088, 1235
HapII CCGG 7 cut(s) 192, 211, 239, 361, 368, 510, 1351
HgaI GACGC 2 cut(s) 143, 235
HhaI GCGC 1 cut(s) 663
Hin1II CATG 9 cut(s) 54, 637, 724, 953, 1016, 1056, 1265, 1386, 1510
Hin6I GCGC 1 cut(s) 661
HinP1I GCGC 1 cut(s) 661
HinfI GANTC 8 cut(s) 89, 260, 320, 872, 881, 1297, 1358, 1631
HpaII CCGG 7 cut(s) 192, 211, 239, 361, 368, 510, 1351
HphI GGTGA 3 cut(s) 388, 646, 913
Hpy166II GTNNAC 3 cut(s) 726, 810, 1064
Hpy188III TCNNGA 9 cut(s) 15, 464, 670, 758, 900, 1013, 1362, 1579, 1635
Hpy8I GTNNAC 3 cut(s) 726, 810, 1064
Hpy99I CGWCG 9 cut(s) 21, 48, 137, 228, 320, 553, 556, 559, 562
HpyAV CCTTC 5 cut(s) 103, 997, 1114, 1426, 1585
HpyCH4III ACNGT 2 cut(s) 316, 1117
HpyCH4IV ACGT 1 cut(s) 1147
HpyCH4V TGCA 9 cut(s) 713, 833, 938, 944, 984, 1261, 1310, 1325, 1420
HpyF10VI GCNNNNNNNGC 8 cut(s) 207, 332, 335, 396, 405, 1201, 1507, 1554
HpySE526I ACGT 1 cut(s) 1147
Hsp92II CATG 9 cut(s) 54, 637, 724, 953, 1016, 1056, 1265, 1386, 1510
HspAI GCGC 1 cut(s) 661
KflI GGGWCCC 1 cut(s) 1332
KpnI GGTACC 1 cut(s) 590
Ksp22I TGATCA 1 cut(s) 516
LmnI GCTCC 5 cut(s) 176, 404, 479, 499, 1616
Lsp1109I GCAGC 4 cut(s) 37, 1167, 1404, 1510
LweI GCATC 3 cut(s) 726, 820, 925
MaeI CTAG 2 cut(s) 840, 1067
MaeII ACGT 1 cut(s) 1147
MaeIII GTNAC 1 cut(s) 963
MboII GAAGA 6 cut(s) 658, 794, 797, 1040, 1226, 1367
MflI RGATCY 2 cut(s) 228, 347
MhlI GDGCHC 8 cut(s) 38, 185, 198, 287, 367, 401, 471, 633
MlsI TGGCCA 1 cut(s) 854
MluCI AATT 5 cut(s) 430, 493, 579, 601, 1311
MluNI TGGCCA 1 cut(s) 854
MlyI GAGTC 3 cut(s) 866, 1306, 1367
MmeI TCCRAC 5 cut(s) 123, 180, 206, 426, 1409
Mox20I TGGCCA 1 cut(s) 854
Mph1103I ATGCAT 1 cut(s) 1263
MroXI GAANNNNTTC 1 cut(s) 1524
MscI TGGCCA 1 cut(s) 854
MseI TTAA 3 cut(s) 749, 819, 1254
MslI CAYNNNNRTG 1 cut(s) 1057
Msp20I TGGCCA 1 cut(s) 854
MspA1I CMGCKG 1 cut(s) 28
MspI CCGG 7 cut(s) 192, 211, 239, 361, 368, 510, 1351
MspR9I CCNGG 7 cut(s) 193, 203, 239, 240, 362, 368, 374
MvaI CCWGG 2 cut(s) 203, 374
MvnI CGCG 1 cut(s) 246
MwoI GCNNNNNNNGC 8 cut(s) 207, 332, 335, 396, 405, 1201, 1507, 1554
NciI CCSGG 5 cut(s) 193, 239, 240, 362, 368
NlaIII CATG 9 cut(s) 54, 637, 724, 953, 1016, 1056, 1265, 1386, 1510
NlaIV GGNNCC 9 cut(s) 285, 286, 365, 366, 588, 803, 1333, 1334, 1612
NmeAIII GCCGAG 2 cut(s) 409, 1261
NsiI ATGCAT 1 cut(s) 1263
NspI RCATGY 1 cut(s) 1510
NspV TTCGAA 1 cut(s) 491
PagI TCATGA 1 cut(s) 1012
PcsI WCGNNNNNNNCGW 2 cut(s) 554, 563
PdmI GAANNNNTTC 1 cut(s) 1524
PfeI GAWTC 5 cut(s) 89, 260, 320, 881, 1631
PflFI GACNNNGTC 1 cut(s) 875
PflMI CCANNNNNTGG 1 cut(s) 280
PkrI GCNGC 8 cut(s) 27, 328, 331, 334, 337, 1182, 1419, 1500
PleI GAGTC 3 cut(s) 866, 1305, 1366
PpsI GAGTC 3 cut(s) 866, 1305, 1366
PpuMI RGGWCCY 1 cut(s) 1332
PshAI GACNNNNGTC 1 cut(s) 222
Psp124BI GAGCTC 4 cut(s) 38, 401, 471, 633
Psp5II RGGWCCY 1 cut(s) 1332
Psp6I CCWGG 2 cut(s) 201, 372
PspFI CCCAGC 1 cut(s) 167
PspGI CCWGG 2 cut(s) 201, 372
PspN4I GGNNCC 9 cut(s) 285, 286, 365, 366, 588, 803, 1333, 1334, 1612
PspOMI GGGCCC 2 cut(s) 283, 363
PspPI GGNCC 9 cut(s) 208, 283, 284, 363, 364, 370, 1233, 1332, 1391
PspPPI RGGWCCY 1 cut(s) 1332
PstI CTGCAG 2 cut(s) 715, 1422
PstNI CAGNNNCTG 1 cut(s) 280
PsuI RGATCY 2 cut(s) 228, 347
PsyI GACNNNGTC 1 cut(s) 875
PvuII CAGCTG 1 cut(s) 28
RsaI GTAC 3 cut(s) 588, 931, 1505
RsaNI GTAC 3 cut(s) 587, 930, 1504
RseI CAYNNNNRTG 1 cut(s) 1057
SacI GAGCTC 4 cut(s) 38, 401, 471, 633
SaqAI TTAA 3 cut(s) 749, 819, 1254
SatI GCNGC 8 cut(s) 26, 327, 330, 333, 336, 1181, 1418, 1499
Sau96I GGNCC 9 cut(s) 208, 283, 284, 363, 364, 370, 1233, 1332, 1391
SchI GAGTC 3 cut(s) 866, 1306, 1367
ScrFI CCNGG 7 cut(s) 193, 203, 239, 240, 362, 368, 374
SduI GDGCHC 8 cut(s) 38, 185, 198, 287, 367, 401, 471, 633
SfaNI GCATC 3 cut(s) 726, 820, 925
SfcI CTRYAG 2 cut(s) 711, 1418
SfuI TTCGAA 1 cut(s) 491
SinI GGWCC 2 cut(s) 1332, 1391
SmaI CCCGGG 1 cut(s) 240
SmiMI CAYNNNNRTG 1 cut(s) 1057
SmlI CTYRAG 6 cut(s) 79, 464, 701, 758, 968, 1153
SmoI CTYRAG 6 cut(s) 79, 464, 701, 758, 968, 1153
SpeI ACTAGT 1 cut(s) 1066
Sse9I AATT 5 cut(s) 430, 493, 579, 601, 1311
SsiI CCGC 7 cut(s) 288, 305, 324, 327, 330, 333, 336
SspMI CTAG 2 cut(s) 840, 1067
SstI GAGCTC 4 cut(s) 38, 401, 471, 633
StyD4I CCNGG 7 cut(s) 191, 201, 237, 238, 360, 366, 372
StyI CCWWGG 1 cut(s) 770
TaaI ACNGT 2 cut(s) 316, 1117
TaiI ACGT 1 cut(s) 1150
TasI AATT 5 cut(s) 430, 493, 579, 601, 1311
TatI WGTACW 2 cut(s) 929, 1503
TauI GCSGC 4 cut(s) 329, 332, 335, 338
TfiI GAWTC 5 cut(s) 89, 260, 320, 881, 1631
Tru1I TTAA 3 cut(s) 749, 819, 1254
Tru9I TTAA 3 cut(s) 749, 819, 1254
TscAI CASTG 4 cut(s) 526, 999, 1096, 1555
TseI GCWGC 4 cut(s) 25, 1180, 1417, 1498
TspDTI ATGAA 1 cut(s) 903
TspGWI ACGGA 1 cut(s) 151
TspMI CCCGGG 1 cut(s) 238
TspRI CASTG 4 cut(s) 526, 999, 1096, 1555
Tth111I GACNNNGTC 1 cut(s) 875
Van91I CCANNNNNTGG 1 cut(s) 280
VpaK11BI GGWCC 2 cut(s) 1332, 1391
XagI CCTNNNNNAGG 1 cut(s) 1022
XapI RAATTY 3 cut(s) 430, 493, 601
XceI RCATGY 1 cut(s) 1510
XmaI CCCGGG 1 cut(s) 238
XmnI GAANNNNTTC 1 cut(s) 1524
XspI CTAG 2 cut(s) 840, 1067
Zsp2I ATGCAT 1 cut(s) 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.