Rorug02G0230900

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0016029
Physical Location & Seq
Reverse (-)
23000978 .. 23004609
3632 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0230900.1

Sequence Viewer

Length: 1599 bp
ATGGCGCTCACAAACCCAGCAACCCTCTCCTCCAAATCACTCTGCGGCAACTCTCTCTGCGCCCCCACCTCTCAATCTCACCAACCCGCTTTCTCTCCTTTCCTCGCCACCAAGAAGCGCCTCGTCCACCCCATCTCCGCCGCGGCCGCCGCAGACGGCGGCAAGGCCCCCGTCGTCGCCGAGAAGCCCCCGAAGGCCGCGGTGGCGGCGCCGAAGCCCAGCTCCGGAAAATGGAGCGTTGAGAGCTGGAAGACCAAGAAGGCTCTGCAGCTCCCTGAGTACCCAGATCAGAATGAGCTCAACACTGTGCTCAACACCATTGAGTCCTTCCCGCCGATCGTGTTCGCCGGAGAGGCCAGGCACTTGGAGGAGAAGATTGCCGAGGCTGCAATGGGCAATGCTTTTCTTCTTCAGGGTGGTGACTGCGCTGAGAGCTTCAAGGAGTTCAGTGCCAATAACATTAGGGACACCTTCAGAGTTATGCTCCAGATGGGTGTGGTTCTGATGTTCGGAGGACAAATGAATGTCGTCAAGGTGGGAAGAATGGCGGGTCAGTTTGCCAAGCCAAGATCGGCTGCAGTTGAGGAGAAGAATGGGGTTACACTGCCAGCTTACAGGGGAGACAATATTAATGGTGAGGCCTTTGATTTGCAGACTAGAACTCCAGACCCTCAGAGGTTAATCAGGGCTTACTGCCAATCTGCTGCAACTTTGAACCTTCTGAGGTCCTTCGCCACTGGAGGGTATGCCGCTATGCAGAGGGTTACTCAATGGAATCTCGACTTTGCTGAGCACAGTGAGCAGGGAGATAGGTACCAGGAATTGGCTCACCGGGTTGATGAAGCCTTGGGATTCATGTCTGCTGCTGGACTTACAGTTGACCATCCTATCATGAGGACAACCGAGTTCTGGACATCCCATGAGTGCTTGCATTTGCCATATGAGCAATCACTCACAAGGGAGGATTCTACTACTGGACTCTTCTATGATTGCTCAGCTCATATGCTTTGGTGCGGGGAGCGTACCCGTCAATTGGATGGTGCCCATGTTGAGTTCCTAAAGGGAATCTCCAACCCCATTGGAGTCAAGGTGAGCAACACAATGGATCCAAAGGATCTTGTTAACCTCATTGAAATCCTGAACCCTAACAACAAGCCAGGAAGGATCACAATCATTGCAAGAATGGGTGCTGAGAACATGAGAGTCAAGCTTCCACACTTGATTAGGGCTGTCCGCCAAGCGGGGCAAATTGTGACCTGGGTCTGCGACCCAATGCATGGAAACACTATTAAGGCCCCCTGTGGACTCAAAACACGTCCATTTGATGCAATTCTGGCTGAGGTGCGAGCATTCTTTGATGTTCATGAGCAAGAAGGGAGCCATCCTGGAGGAATTCATCTCGAGATGACTGGCCAGAATGTGACCGAGTGCATTGGAGGATCCCGAACAGTGACTTTCGATGATCTGAGCTCACGCTACCACACACACTGTGACCCAAGACTGAATGCTTCTCAGGCTCTTGAGCTAGCCTTTATCATCGCTGAACGACTAAGGAAGAGAAGGATCGGAACACAACGTTTGCTCTCTTTAAGCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

532

Amino Acids

58.46

Weight (kDa)

7.98

Isoelectric Point (pI)

39.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAHP_synth_2 PF01474 78 - 514 2.2e-204 Class-II DAHP synthetase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016029)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G13690
fragaria_vesca FvH4_1g24270
malus_domestica MD15G1343000.v1.1
pyrus_communis pycom15g30410
rosa_chinensis RchiOBHm_Chr2g0120761
rosa_laevigata RLG00000018578 RLG00000024327
rosa_multiflora Rmu_sc0000319.1_g000008
rosa_roxburghii Rroxscaffold_2G00123110
rosa_rugosa Rorug02G0230900
rosa_samantha Rh2AG287500 Rh2BG299000 Rh2CG276900 Rh2DG312800
rosa_wichuraiana Rw2G023060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 813
AccB1I GGYRCC 3 cut(s) 208, 813, 1040
AccB7I CCANNNNNTGG 2 cut(s) 823, 1277
AccII CGCG 2 cut(s) 143, 200
AccIII TCCGGA 1 cut(s) 224
AclI AACGTT 1 cut(s) 1576
AclWI GGATC 7 cut(s) 1100, 1113, 1122, 1172, 1434, 1447, 1571
AcoI YGGCCR 2 cut(s) 144, 1411
AcsI RAATTY 1 cut(s) 1392
AcuI CTGAAG 2 cut(s) 395, 457
AcyI GRCGYC 1 cut(s) 209
AdeI CACNNNGTG 1 cut(s) 1490
AfaI GTAC 3 cut(s) 281, 815, 1024
AfiI CCNNNNNNNGG 8 cut(s) 224, 231, 741, 823, 909, 1033, 1240, 1277
AflIII ACRYGT 1 cut(s) 1313
AgsI TTSAA 3 cut(s) 439, 715, 1133
AjiI CACGTC 1 cut(s) 1316
AjnI CCWGG 5 cut(s) 356, 816, 1156, 1256, 1384
Alw21I GWGCWC 4 cut(s) 300, 312, 795, 1472
Alw26I GTCTC 1 cut(s) 615
AlwI GGATC 7 cut(s) 1100, 1113, 1122, 1172, 1434, 1447, 1571
Ama87I CYCGRG 1 cut(s) 1400
Aor13HI TCCGGA 1 cut(s) 224
AoxI GGCC 7 cut(s) 144, 165, 195, 354, 639, 1293, 1411
ApeKI GCWGC 5 cut(s) 268, 386, 575, 704, 863
ApoI RAATTY 1 cut(s) 1392
AseI ATTAAT 1 cut(s) 630
Asp718I GGTACC 1 cut(s) 813
AspLEI GCGC 5 cut(s) 7, 62, 120, 211, 428
AspS9I GGNCC 3 cut(s) 166, 726, 1294
AsuC2I CCSGG 1 cut(s) 833
AsuHPI GGTGA 5 cut(s) 71, 431, 647, 821, 1102
AsuNHI GCTAGC 1 cut(s) 1525
AvaI CYCGRG 1 cut(s) 1400
AvaII GGWCC 1 cut(s) 726
BaeGI GKGCMC 1 cut(s) 1045
BalI TGGCCA 1 cut(s) 1413
BamHI GGATCC 2 cut(s) 1105, 1439
BanI GGYRCC 3 cut(s) 208, 813, 1040
BanII GRGCYC 2 cut(s) 300, 1472
BbsI GAAGAC 1 cut(s) 257
Bbv12I GWGCWC 4 cut(s) 300, 312, 795, 1472
BbvCI CCTCAGC 1 cut(s) 1338
BbvI GCAGC 5 cut(s) 280, 373, 562, 691, 850
BccI CCATC 5 cut(s) 140, 484, 891, 1031, 1389
BceAI ACGGC 1 cut(s) 172
BciT130I CCWGG 5 cut(s) 358, 818, 1158, 1258, 1386
BcnI CCSGG 1 cut(s) 833
BcoDI GTCTC 1 cut(s) 615
BfaI CTAG 2 cut(s) 657, 1526
BfmI CTRYAG 2 cut(s) 266, 576
BfoI RGCGCY 3 cut(s) 8, 121, 212
BglI GCCNNNNNGGC 2 cut(s) 203, 353
BlpI GCTNAGC 2 cut(s) 789, 994
Bme1390I CCNGG 6 cut(s) 358, 818, 833, 1158, 1258, 1386
Bme18I GGWCC 1 cut(s) 726
BmeT110I CYCGRG 1 cut(s) 1400
BmgBI CACGTC 1 cut(s) 1316
BmgT120I GGNCC 3 cut(s) 166, 726, 1294
BmiI GGNNCC 8 cut(s) 168, 210, 815, 1042, 1107, 1296, 1379, 1441
BmrFI CCNGG 6 cut(s) 358, 818, 833, 1158, 1258, 1386
BmsI GCATC 1 cut(s) 1315
BmtI GCTAGC 1 cut(s) 1529
BoxI GACNNNNGTC 1 cut(s) 1259
BpiI GAAGAC 1 cut(s) 257
BplI GAGNNNNNCTC 4 cut(s) 468, 500, 751, 783
BpmI CTGGAG 4 cut(s) 470, 648, 759, 1407
Bpu10I CCTNAGC 1 cut(s) 1338
Bpu1102I GCTNAGC 2 cut(s) 789, 994
BpuEI CTTGAG 1 cut(s) 1541
BpuMI CCSGG 1 cut(s) 833
BsaBI GATNNNNATC 1 cut(s) 1169
BsaHI GRCGYC 1 cut(s) 209
BsaJI CCNNGG 5 cut(s) 141, 198, 381, 846, 1257
BsaWI WCCGGW 1 cut(s) 224
BsaXI ACNNNNNCTCC 6 cut(s) 119, 149, 646, 676, 1074, 1104
Bsc4I CCNNNNNNNGG 8 cut(s) 224, 231, 741, 823, 909, 1033, 1240, 1277
Bse1I ACTGG 3 cut(s) 742, 979, 1414
Bse3DI GCAATG 3 cut(s) 396, 403, 1173
Bse8I GATNNNNATC 1 cut(s) 1169
BseAI TCCGGA 1 cut(s) 224
BseBI CCWGG 5 cut(s) 358, 818, 1158, 1258, 1386
BseDI CCNNGG 5 cut(s) 141, 198, 381, 846, 1257
BseGI GGATG 4 cut(s) 883, 914, 1042, 1381
BseJI GATNNNNATC 1 cut(s) 1169
BseLI CCNNNNNNNGG 8 cut(s) 224, 231, 741, 823, 909, 1033, 1240, 1277
BseMI GCAATG 3 cut(s) 396, 403, 1173
BseNI ACTGG 3 cut(s) 742, 979, 1414
BseRI GAGGAG 3 cut(s) 19, 383, 599
BseSI GKGCMC 1 cut(s) 1045
BseX3I CGGCCG 1 cut(s) 144
BseXI GCAGC 5 cut(s) 280, 373, 562, 691, 850
BseYI CCCAGC 2 cut(s) 16, 218
Bsh1236I CGCG 2 cut(s) 143, 200
Bsh1285I CGRYCG 2 cut(s) 147, 339
BshFI GGCC 7 cut(s) 146, 167, 197, 356, 641, 1295, 1413
BshNI GGYRCC 3 cut(s) 208, 813, 1040
BsiEI CGRYCG 2 cut(s) 147, 339
BsiHKAI GWGCWC 4 cut(s) 300, 312, 795, 1472
BsiHKCI CYCGRG 1 cut(s) 1400
BsiSI CCGG 3 cut(s) 225, 348, 832
BslFI GGGAC 1 cut(s) 479
BslI CCNNNNNNNGG 8 cut(s) 224, 231, 741, 823, 909, 1033, 1240, 1277
BsmAI GTCTC 1 cut(s) 615
BsmFI GGGAC 1 cut(s) 479
BsmI GAATGC 2 cut(s) 1349, 1510
BsnI GGCC 7 cut(s) 146, 167, 197, 356, 641, 1295, 1413
BsoBI CYCGRG 1 cut(s) 1400
Bsp1286I GDGCHC 5 cut(s) 300, 312, 795, 1045, 1472
Bsp13I TCCGGA 1 cut(s) 224
Bsp143I GATC 9 cut(s) 286, 336, 569, 1105, 1114, 1164, 1439, 1462, 1563
Bsp1720I GCTNAGC 2 cut(s) 789, 994
BspANI GGCC 7 cut(s) 146, 167, 197, 356, 641, 1295, 1413
BspEI TCCGGA 1 cut(s) 224
BspFNI CGCG 2 cut(s) 143, 200
BspHI TCATGA 2 cut(s) 891, 1363
BspLI GGNNCC 8 cut(s) 168, 210, 815, 1042, 1107, 1296, 1379, 1441
BspMAI CTGCAG 2 cut(s) 270, 580
BspOI GCTAGC 1 cut(s) 1529
BspPI GGATC 7 cut(s) 1100, 1113, 1122, 1172, 1434, 1447, 1571
BspT107I GGYRCC 3 cut(s) 208, 813, 1040
BsrDI GCAATG 3 cut(s) 396, 403, 1173
BsrI ACTGG 3 cut(s) 742, 979, 1414
BssECI CCNNGG 5 cut(s) 141, 198, 381, 846, 1257
BssMI GATC 9 cut(s) 286, 336, 569, 1105, 1114, 1164, 1439, 1462, 1563
BssNI GRCGYC 1 cut(s) 209
BssT1I CCWWGG 1 cut(s) 846
Bst2UI CCWGG 5 cut(s) 358, 818, 1158, 1258, 1386
Bst4CI ACNGT 5 cut(s) 307, 797, 877, 1450, 1490
Bst6I CTCTTC 2 cut(s) 986, 1550
BstACI GRCGYC 1 cut(s) 209
BstC8I GCNNGC 4 cut(s) 609, 929, 1347, 1527
BstDSI CCRYGG 2 cut(s) 141, 198
BstF5I GGATG 4 cut(s) 883, 914, 1042, 1381
BstFNI CGCG 2 cut(s) 143, 200
BstH2I RGCGCY 3 cut(s) 8, 121, 212
BstHHI GCGC 5 cut(s) 7, 62, 120, 211, 428
BstKTI GATC 9 cut(s) 289, 339, 572, 1108, 1117, 1167, 1442, 1465, 1566
BstMAI GTCTC 1 cut(s) 615
BstMBI GATC 9 cut(s) 286, 336, 569, 1105, 1114, 1164, 1439, 1462, 1563
BstMCI CGRYCG 2 cut(s) 147, 339
BstNI CCWGG 5 cut(s) 358, 818, 1158, 1258, 1386
BstPAI GACNNNNGTC 1 cut(s) 1259
BstSCI CCNGG 6 cut(s) 356, 816, 831, 1156, 1256, 1384
BstSFI CTRYAG 2 cut(s) 266, 576
BstSLI GKGCMC 1 cut(s) 1045
BstUI CGCG 2 cut(s) 143, 200
BstV1I GCAGC 5 cut(s) 280, 373, 562, 691, 850
BstV2I GAAGAC 1 cut(s) 257
BstX2I RGATCY 3 cut(s) 1105, 1114, 1439
BstXI CCANNNNNNTGG 1 cut(s) 364
BstYI RGATCY 3 cut(s) 1105, 1114, 1439
BstZI CGGCCG 1 cut(s) 144
BsuRI GGCC 7 cut(s) 146, 167, 197, 356, 641, 1295, 1413
BtgI CCRYGG 2 cut(s) 141, 198
BtgZI GCGATG 1 cut(s) 1522
BtrI CACGTC 1 cut(s) 1316
BtsCI GGATG 4 cut(s) 883, 914, 1042, 1381
BtsI GCAGTG 1 cut(s) 602
BtsIMutI CAGTG 7 cut(s) 303, 454, 602, 735, 802, 1455, 1486
Cac8I GCNNGC 4 cut(s) 609, 929, 1347, 1527
CciI TCATGA 2 cut(s) 891, 1363
CciNI GCGGCCGC 1 cut(s) 144
CfoI GCGC 5 cut(s) 7, 62, 120, 211, 428
Cfr13I GGNCC 3 cut(s) 166, 726, 1294
Cfr42I CCGCGG 2 cut(s) 144, 201
Csp6I GTAC 3 cut(s) 280, 814, 1023
CviAII CATG 7 cut(s) 856, 892, 920, 1046, 1198, 1277, 1364
CviQI GTAC 3 cut(s) 280, 814, 1023
DinI GGCGCC 1 cut(s) 210
DpnI GATC 9 cut(s) 288, 338, 571, 1107, 1116, 1166, 1441, 1464, 1565
DpnII GATC 9 cut(s) 286, 336, 569, 1105, 1114, 1164, 1439, 1462, 1563
DraIII CACNNNGTG 1 cut(s) 1490
EaeI YGGCCR 2 cut(s) 144, 1411
EagI CGGCCG 1 cut(s) 144
Eam1104I CTCTTC 2 cut(s) 986, 1550
EarI CTCTTC 2 cut(s) 986, 1550
EciI GGCGGA 2 cut(s) 127, 1223
Ecl136II GAGCTC 2 cut(s) 298, 1470
EclXI CGGCCG 1 cut(s) 144
Eco130I CCWWGG 1 cut(s) 846
Eco147I AGGCCT 1 cut(s) 641
Eco24I GRGCYC 2 cut(s) 300, 1472
Eco47I GGWCC 1 cut(s) 726
Eco52I CGGCCG 1 cut(s) 144
Eco53kI GAGCTC 2 cut(s) 298, 1470
Eco57I CTGAAG 2 cut(s) 395, 457
Eco88I CYCGRG 1 cut(s) 1400
EcoICRI GAGCTC 2 cut(s) 298, 1470
EcoO109I RGGNCCY 3 cut(s) 166, 726, 1294
EcoRI GAATTC 1 cut(s) 1392
EcoRII CCWGG 5 cut(s) 356, 816, 1156, 1256, 1384
EcoT14I CCWWGG 1 cut(s) 846
EcoT22I ATGCAT 1 cut(s) 1278
EcoT38I GRGCYC 2 cut(s) 300, 1472
EgeI GGCGCC 1 cut(s) 210
EheI GGCGCC 1 cut(s) 210
ErhI CCWWGG 1 cut(s) 846
FaeI CATG 7 cut(s) 859, 895, 923, 1049, 1201, 1280, 1367
FaqI GGGAC 1 cut(s) 479
FatI CATG 7 cut(s) 855, 891, 919, 1045, 1197, 1276, 1363
FauI CCCGC 5 cut(s) 94, 339, 541, 1007, 1234
FauNDI CATATG 2 cut(s) 940, 1002
FokI GGATG 4 cut(s) 870, 901, 1049, 1368
FriOI GRGCYC 2 cut(s) 300, 1472
FspBI CTAG 2 cut(s) 657, 1526
GlaI GCGC 5 cut(s) 6, 61, 119, 210, 427
GsaI CCCAGC 2 cut(s) 20, 222
GsuI CTGGAG 4 cut(s) 470, 648, 759, 1407
HaeII RGCGCY 3 cut(s) 8, 121, 212
HaeIII GGCC 7 cut(s) 146, 167, 197, 356, 641, 1295, 1413
HapII CCGG 3 cut(s) 225, 348, 832
HhaI GCGC 5 cut(s) 7, 62, 120, 211, 428
Hin1I GRCGYC 1 cut(s) 209
Hin1II CATG 7 cut(s) 859, 895, 923, 1049, 1201, 1280, 1367
Hin6I GCGC 5 cut(s) 5, 60, 118, 209, 426
HinP1I GCGC 5 cut(s) 5, 60, 118, 209, 426
HincII GTYRAC 2 cut(s) 880, 1123
HindII GTYRAC 2 cut(s) 880, 1123
HindIII AAGCTT 1 cut(s) 1208
HinfI GANTC 9 cut(s) 323, 775, 852, 965, 978, 1065, 1083, 1203, 1305
HpaI GTTAAC 1 cut(s) 1123
HpaII CCGG 3 cut(s) 225, 348, 832
HphI GGTGA 5 cut(s) 71, 431, 647, 821, 1102
Hpy166II GTNNAC 4 cut(s) 127, 880, 1123, 1304
Hpy188I TCNGA 8 cut(s) 291, 476, 504, 512, 675, 723, 1467, 1568
Hpy8I GTNNAC 4 cut(s) 127, 880, 1123, 1304
Hpy99I CGWCG 2 cut(s) 176, 179
HpyAV CCTTC 9 cut(s) 187, 253, 337, 481, 728, 739, 1155, 1367, 1554
HpyCH4III ACNGT 5 cut(s) 307, 797, 877, 1450, 1490
HpyCH4IV ACGT 2 cut(s) 1315, 1576
HpySE526I ACGT 2 cut(s) 1315, 1576
Hsp92I GRCGYC 1 cut(s) 209
Hsp92II CATG 7 cut(s) 859, 895, 923, 1049, 1201, 1280, 1367
HspAI GCGC 5 cut(s) 5, 60, 118, 209, 426
KasI GGCGCC 1 cut(s) 208
Kpn2I TCCGGA 1 cut(s) 224
KpnI GGTACC 1 cut(s) 817
KspAI GTTAAC 1 cut(s) 1123
KspI CCGCGG 2 cut(s) 144, 201
Kzo9I GATC 9 cut(s) 286, 336, 569, 1105, 1114, 1164, 1439, 1462, 1563
LmnI GCTCC 6 cut(s) 227, 234, 276, 489, 1018, 1377
Lsp1109I GCAGC 5 cut(s) 280, 373, 562, 691, 850
LweI GCATC 1 cut(s) 1315
MaeI CTAG 2 cut(s) 657, 1526
MaeII ACGT 2 cut(s) 1315, 1576
MaeIII GTNAC 7 cut(s) 419, 598, 763, 1252, 1420, 1450, 1490
MalI GATC 9 cut(s) 288, 338, 571, 1107, 1116, 1166, 1441, 1464, 1565
MboI GATC 9 cut(s) 286, 336, 569, 1105, 1114, 1164, 1439, 1462, 1563
MboII GAAGA 8 cut(s) 262, 385, 398, 401, 552, 601, 973, 1567
MfeI CAATTG 1 cut(s) 1031
MflI RGATCY 3 cut(s) 1105, 1114, 1439
MhlI GDGCHC 5 cut(s) 300, 312, 795, 1045, 1472
MlsI TGGCCA 1 cut(s) 1413
MluCI AATT 5 cut(s) 821, 1031, 1248, 1329, 1392
MluNI TGGCCA 1 cut(s) 1413
Mly113I GGCGCC 1 cut(s) 209
MlyI GAGTC 5 cut(s) 332, 972, 1092, 1212, 1299
MmeI TCCRAC 1 cut(s) 1095
Mox20I TGGCCA 1 cut(s) 1413
Mph1103I ATGCAT 1 cut(s) 1278
MroI TCCGGA 1 cut(s) 224
MscI TGGCCA 1 cut(s) 1413
MseI TTAA 5 cut(s) 630, 680, 1122, 1290, 1589
Msp20I TGGCCA 1 cut(s) 1413
MspA1I CMGCKG 2 cut(s) 143, 200
MspI CCGG 3 cut(s) 225, 348, 832
MspR9I CCNGG 6 cut(s) 358, 818, 833, 1158, 1258, 1386
MunI CAATTG 1 cut(s) 1031
Mva1269I GAATGC 2 cut(s) 1349, 1510
MvaI CCWGG 5 cut(s) 358, 818, 1158, 1258, 1386
MvnI CGCG 2 cut(s) 143, 200
NarI GGCGCC 1 cut(s) 209
NciI CCSGG 1 cut(s) 833
NdeI CATATG 2 cut(s) 940, 1002
NdeII GATC 9 cut(s) 286, 336, 569, 1105, 1114, 1164, 1439, 1462, 1563
NheI GCTAGC 1 cut(s) 1525
NlaIII CATG 7 cut(s) 859, 895, 923, 1049, 1201, 1280, 1367
NlaIV GGNNCC 8 cut(s) 168, 210, 815, 1042, 1107, 1296, 1379, 1441
NmeAIII GCCGAG 2 cut(s) 205, 406
NmuCI GTSAC 5 cut(s) 419, 1252, 1420, 1450, 1490
NotI GCGGCCGC 1 cut(s) 144
NsiI ATGCAT 1 cut(s) 1278
PaeR7I CTCGAG 1 cut(s) 1400
PagI TCATGA 2 cut(s) 891, 1363
PceI AGGCCT 1 cut(s) 641
PctI GAATGC 2 cut(s) 1349, 1510
PfeI GAWTC 4 cut(s) 775, 852, 965, 1065
PflMI CCANNNNNTGG 2 cut(s) 823, 1277
PfoI TCCNGGA 1 cut(s) 1384
Ple19I CGATCG 1 cut(s) 339
PleI GAGTC 5 cut(s) 331, 972, 1091, 1211, 1299
PluTI GGCGCC 1 cut(s) 212
PpsI GAGTC 5 cut(s) 331, 972, 1091, 1211, 1299
PpuMI RGGWCCY 1 cut(s) 726
PshAI GACNNNNGTC 1 cut(s) 1259
PshBI ATTAAT 1 cut(s) 630
Psp124BI GAGCTC 2 cut(s) 300, 1472
Psp1406I AACGTT 1 cut(s) 1576
Psp5II RGGWCCY 1 cut(s) 726
Psp6I CCWGG 5 cut(s) 356, 816, 1156, 1256, 1384
PspFI CCCAGC 2 cut(s) 16, 218
PspGI CCWGG 5 cut(s) 356, 816, 1156, 1256, 1384
PspN4I GGNNCC 8 cut(s) 168, 210, 815, 1042, 1107, 1296, 1379, 1441
PspPI GGNCC 3 cut(s) 166, 726, 1294
PspPPI RGGWCCY 1 cut(s) 726
PstI CTGCAG 2 cut(s) 270, 580
PsuI RGATCY 3 cut(s) 1105, 1114, 1439
PvuI CGATCG 1 cut(s) 339
RsaI GTAC 3 cut(s) 281, 815, 1024
RsaNI GTAC 3 cut(s) 280, 814, 1023
SacI GAGCTC 2 cut(s) 300, 1472
SacII CCGCGG 2 cut(s) 144, 201
SaqAI TTAA 5 cut(s) 630, 680, 1122, 1290, 1589
Sau3AI GATC 9 cut(s) 286, 336, 569, 1105, 1114, 1164, 1439, 1462, 1563
Sau96I GGNCC 3 cut(s) 166, 726, 1294
SchI GAGTC 5 cut(s) 332, 972, 1092, 1212, 1299
ScrFI CCNGG 6 cut(s) 358, 818, 833, 1158, 1258, 1386
SduI GDGCHC 5 cut(s) 300, 312, 795, 1045, 1472
SfaNI GCATC 1 cut(s) 1315
SfcI CTRYAG 2 cut(s) 266, 576
SfoI GGCGCC 1 cut(s) 210
Sfr274I CTCGAG 1 cut(s) 1400
Sfr303I CCGCGG 2 cut(s) 144, 201
SgrBI CCGCGG 2 cut(s) 144, 201
SinI GGWCC 1 cut(s) 726
SlaI CTCGAG 1 cut(s) 1400
SmlI CTYRAG 2 cut(s) 1400, 1520
SmoI CTYRAG 2 cut(s) 1400, 1520
Sse9I AATT 5 cut(s) 821, 1031, 1248, 1329, 1392
SseBI AGGCCT 1 cut(s) 641
SspDI GGCGCC 1 cut(s) 208
SspI AATATT 1 cut(s) 628
SspMI CTAG 2 cut(s) 657, 1526
SstI GAGCTC 2 cut(s) 300, 1472
StuI AGGCCT 1 cut(s) 641
StyD4I CCNGG 6 cut(s) 356, 816, 831, 1156, 1256, 1384
StyI CCWWGG 1 cut(s) 846
TaaI ACNGT 5 cut(s) 307, 797, 877, 1450, 1490
TaiI ACGT 2 cut(s) 1318, 1579
TaqI TCGA 3 cut(s) 780, 1401, 1458
TaqII GACCGA 1 cut(s) 1439
TasI AATT 5 cut(s) 821, 1031, 1248, 1329, 1392
TauI GCSGC 9 cut(s) 48, 143, 146, 149, 152, 162, 200, 209, 752
TfiI GAWTC 4 cut(s) 775, 852, 965, 1065
Tru1I TTAA 5 cut(s) 630, 680, 1122, 1290, 1589
Tru9I TTAA 5 cut(s) 630, 680, 1122, 1290, 1589
TscAI CASTG 7 cut(s) 310, 454, 609, 742, 802, 1455, 1493
TseFI GTSAC 5 cut(s) 419, 1252, 1420, 1450, 1490
TseI GCWGC 5 cut(s) 268, 386, 575, 704, 863
Tsp45I GTSAC 5 cut(s) 419, 1252, 1420, 1450, 1490
TspDTI ATGAA 5 cut(s) 536, 844, 855, 1352, 1385
TspRI CASTG 7 cut(s) 310, 454, 609, 742, 802, 1455, 1493
Van91I CCANNNNNTGG 2 cut(s) 823, 1277
VpaK11BI GGWCC 1 cut(s) 726
VspI ATTAAT 1 cut(s) 630
XapI RAATTY 1 cut(s) 1392
XhoI CTCGAG 1 cut(s) 1400
XspI CTAG 2 cut(s) 657, 1526
Zsp2I ATGCAT 1 cut(s) 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.