RLG00000018578

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0016029
Physical Location & Seq
Reverse (-)
32134073 .. 32136730
2658 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018578

Sequence Viewer

Length: 1644 bp
ATGGACGACATCTCCCGACGAAAGCAGCTGAGCTCTCGCCGACGATCATGGTGTTGCCCATTCACAGACCCACCCTCAAGCCCCGAATCCTTCTCGAACCCTAAACTCTCCAAACCCCTCCAAAAGTTGGACACTTTCTCCAAACCCAACTCCAACTCCGTCCCCAGCTCCCCCCTGAGCACCAAATCAGGGCTGAGCCTGGTGGGCCGGATCGACCCCCGCCGGATCTTGTCCCCGGGTCGCGTCTCCCCAATCGATTCCAGCCCGATCCAGCAACTGGGCCCCGCCCCATCTCCTCCTCCGCCTCCCACCACCGTCGATTCTTCCTCCGCCGCCGCCCAGATGAGATCCCAGAGCTTCCGGGCCCCGGCCCAGGTGATCAGAGCCGAGAGCGTGTCGAGCTCCGAGAGCAATGTGTTCGATGTGAGGTTGAATTTGAGAGGCAAAAGGGGCGGGGGTTTGGTTCTTGAGCTCAGCTCCGAGGTTCTGAGTTCGAATTCGGAGCTTTTCGCCGGATTGATCAGTGAGTATAGAAAGAGTAACAATGGGTCGTCGTCGTCGTCGGGGTCGAAAATGTGTCGAATTGAGGTACCTGAGGTGGAGAATTTGTCAGTTTTTAGAGAAGCCATTGAGCTCATGTTTGAGGATGATGACATCACCAAGCGCCTCTCCAGGATTGGGGTGTATAGAGTTATTGATGTGCTTGAGGTATCTGCAGGCATCATGTTCACTAAGGGTGTCTTGTCCTGTTTAAAATATCTTGAGGCTGTTCCTTGGACTGAGGAAGAAGAGGAGAAGCTTAGGAACCTGTTTACAAGGTTTAAGTTTGATGATGCAACAACTAGAGACATCTTGGCCAGACTTTACTTGCTTGACTCTGTCGATTCTCAACAAAACTTATCCAGACAACTTGTTTCATCTATCACCACTTGTACAGATGCAAATGCAAGGCATGAGCTGAAGTTGTTAGTCAAGGGTCTCCTGTGCAGAAGTTCAGTGTATGAGAAGGACCATCATGACCTAAGTAAGGAAGATATTTATGGTGTATGTCGATCATGTCTGTCTTCACTAGTTAGTCTCTTTGAGGAGGCCACTGGCAACATTTCTCATCAGAAAACTGTGAAGGAGACAGGTAAGCCTATGATAGAACGTGTCTCAAGGCAGGTTGATAATATCAACTGGCTGCTGGACATCTTGCTTGATCGGCAAATGGCTGAAGATTTTGTGGATATATGGGCCGAGCAGGGAGAACTTCTTAAAATGCATGGCGATACTTCTCCTATGGTCAGGTATGAGCTGAGCCGAGTTTCTGCAATTTTATTTGTTGCAATGGGGACCCGAAAACTACAATGCCGGTCTGAGTCGAGATCAGGGCTTCTTCAGGCATGGTTTGGTCCAATGCTTTTGGATTTTGGTTGGCTGCAGAGATGTCGGAAGGGGCTTGACATAAAGAGTTTGGAGGAAGCTCTGGGTCAGACACTCCTTACGCTACCATTGAAACAGCAGTATATGCTTTTTATGGAATGGTTTCGATATTTCTCAAAGCACAGCACCGACTGCCCTAACCTCAGCAAAGCCTTCCAGATATGGTGGCGTAGATCATTTCTAAGAGGCTCCGAAACTTCTGCCATTGAATCCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

548

Amino Acids

61.62

Weight (kDa)

8.53

Isoelectric Point (pI)

65.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 294 - 537 2.8e-133 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016029)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G13690
fragaria_vesca FvH4_1g24270
malus_domestica MD15G1343000.v1.1
pyrus_communis pycom15g30410
rosa_chinensis RchiOBHm_Chr2g0120761
rosa_laevigata RLG00000018578 RLG00000024327
rosa_multiflora Rmu_sc0000319.1_g000008
rosa_roxburghii Rroxscaffold_2G00123110
rosa_rugosa Rorug02G0230900
rosa_samantha Rh2AG287500 Rh2BG299000 Rh2CG276900 Rh2DG312800
rosa_wichuraiana Rw2G023060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1153
Acc65I GGTACC 1 cut(s) 589
AccB1I GGYRCC 1 cut(s) 589
AccB7I CCANNNNNTGG 2 cut(s) 127, 277
AccII CGCG 1 cut(s) 243
AciI CCGC 7 cut(s) 220, 285, 302, 330, 333, 336, 453
AclWI GGATC 4 cut(s) 218, 233, 262, 342
AcoI YGGCCR 1 cut(s) 855
AcsI RAATTY 3 cut(s) 433, 496, 604
AcuI CTGAAG 3 cut(s) 980, 1236, 1364
AfaI GTAC 2 cut(s) 591, 934
AfiI CCNNNNNNNGG 7 cut(s) 127, 189, 277, 367, 373, 678, 1027
AflIII ACRYGT 1 cut(s) 1150
AgsI TTSAA 3 cut(s) 433, 1498, 1634
AhlI ACTAGT 1 cut(s) 1069
AjnI CCWGG 3 cut(s) 198, 372, 671
Alw21I GWGCWC 5 cut(s) 35, 182, 404, 474, 636
Alw26I GTCTC 6 cut(s) 250, 840, 983, 1082, 1121, 1159
AlwI GGATC 4 cut(s) 218, 233, 262, 342
AlwNI CAGNNNCTG 1 cut(s) 277
Ama87I CYCGRG 1 cut(s) 235
AoxI GGCC 7 cut(s) 205, 280, 363, 369, 855, 1089, 1236
ApaI GGGCCC 2 cut(s) 284, 367
ApeKI GCWGC 3 cut(s) 25, 1183, 1420
ApoI RAATTY 3 cut(s) 433, 496, 604
Asp700I GAANNNNTTC 1 cut(s) 1527
Asp718I GGTACC 1 cut(s) 589
AspLEI GCGC 1 cut(s) 666
AsuC2I CCSGG 4 cut(s) 236, 237, 362, 368
AsuHPI GGTGA 3 cut(s) 388, 649, 916
AsuII TTCGAA 1 cut(s) 494
AvaI CYCGRG 1 cut(s) 235
AvaII GGWCC 3 cut(s) 1009, 1335, 1394
AxyI CCTNAGG 1 cut(s) 594
BaeGI GKGCMC 2 cut(s) 284, 367
BalI TGGCCA 1 cut(s) 857
BanI GGYRCC 1 cut(s) 589
BanII GRGCYC 6 cut(s) 35, 284, 367, 404, 474, 636
BbsI GAAGAC 1 cut(s) 1056
Bbv12I GWGCWC 5 cut(s) 35, 182, 404, 474, 636
BbvCI CCTCAGC 1 cut(s) 1568
BbvI GCAGC 3 cut(s) 37, 1170, 1407
BccI CCATC 2 cut(s) 298, 1020
BcgI CGANNNNNNTGC 6 cut(s) 400, 434, 1412, 1446, 1607, 1641
BciT130I CCWGG 3 cut(s) 200, 374, 673
BclI TGATCA 2 cut(s) 378, 519
BcnI CCSGG 4 cut(s) 236, 237, 362, 368
BcoDI GTCTC 6 cut(s) 250, 840, 983, 1082, 1121, 1159
BcuI ACTAGT 1 cut(s) 1069
BfaI CTAG 2 cut(s) 843, 1070
BfmI CTRYAG 2 cut(s) 714, 1421
BfoI RGCGCY 1 cut(s) 667
BfuAI ACCTGC 1 cut(s) 1153
BglI GCCNNNNNGGC 1 cut(s) 204
BisI GCNGC 5 cut(s) 26, 333, 336, 1184, 1421
BlpI GCTNAGC 4 cut(s) 29, 194, 473, 1298
BlsI GCNGC 5 cut(s) 27, 334, 337, 1185, 1422
Bme1390I CCNGG 7 cut(s) 200, 236, 237, 362, 368, 374, 673
Bme18I GGWCC 3 cut(s) 1009, 1335, 1394
BmeT110I CYCGRG 1 cut(s) 235
BmiI GGNNCC 9 cut(s) 282, 283, 365, 366, 591, 806, 1336, 1337, 1615
BmrFI CCNGG 7 cut(s) 200, 236, 237, 362, 368, 374, 673
BmrI ACTGGG 1 cut(s) 287
BmsI GCATC 3 cut(s) 729, 823, 928
BmuI ACTGGG 1 cut(s) 287
BpiI GAAGAC 1 cut(s) 1056
BplI GAGNNNNNCTC 2 cut(s) 461, 493
BpmI CTGGAG 1 cut(s) 655
Bpu10I CCTNAGC 3 cut(s) 176, 800, 1568
Bpu1102I GCTNAGC 4 cut(s) 29, 194, 473, 1298
Bpu14I TTCGAA 1 cut(s) 494
BpuEI CTTGAG 5 cut(s) 61, 488, 725, 782, 1141
BpuMI CCSGG 4 cut(s) 236, 237, 362, 368
Bsa29I ATCGAT 1 cut(s) 255
BsaI GGTCTC 1 cut(s) 983
BsaJI CCNNGG 6 cut(s) 234, 235, 366, 372, 480, 773
BsaXI ACNNNNNCTCC 7 cut(s) 26, 122, 140, 152, 170, 593, 623
Bsc4I CCNNNNNNNGG 7 cut(s) 127, 189, 277, 367, 373, 678, 1027
Bse118I RCCGGY 1 cut(s) 1353
Bse1I ACTGG 3 cut(s) 282, 1099, 1184
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 2 cut(s) 418, 1335
BseBI CCWGG 3 cut(s) 200, 374, 673
BseCI ATCGAT 1 cut(s) 255
BseDI CCNNGG 6 cut(s) 234, 235, 366, 372, 480, 773
BseGI GGATG 1 cut(s) 652
BseLI CCNNNNNNNGG 7 cut(s) 127, 189, 277, 367, 373, 678, 1027
BseMI GCAATG 2 cut(s) 418, 1335
BseNI ACTGG 3 cut(s) 282, 1099, 1184
BseRI GAGGAG 4 cut(s) 285, 288, 806, 1100
BseSI GKGCMC 2 cut(s) 284, 367
BseXI GCAGC 3 cut(s) 37, 1170, 1407
BseYI CCCAGC 1 cut(s) 164
BsgI GTGCAG 1 cut(s) 1006
Bsh1236I CGCG 1 cut(s) 243
BshFI GGCC 7 cut(s) 207, 282, 365, 371, 857, 1091, 1238
BshNI GGYRCC 1 cut(s) 589
BshVI ATCGAT 1 cut(s) 255
BsiHKAI GWGCWC 5 cut(s) 35, 182, 404, 474, 636
BsiHKCI CYCGRG 1 cut(s) 235
BsiSI CCGG 7 cut(s) 208, 223, 236, 361, 368, 513, 1354
BslFI GGGAC 3 cut(s) 146, 217, 1348
BslI CCNNNNNNNGG 7 cut(s) 127, 189, 277, 367, 373, 678, 1027
BsmAI GTCTC 6 cut(s) 250, 840, 983, 1082, 1121, 1159
BsmBI CGTCTC 1 cut(s) 250
BsmFI GGGAC 3 cut(s) 146, 217, 1348
BsnI GGCC 7 cut(s) 207, 282, 365, 371, 857, 1091, 1238
Bso31I GGTCTC 1 cut(s) 983
BsoBI CYCGRG 1 cut(s) 235
Bsp119I TTCGAA 1 cut(s) 494
Bsp120I GGGCCC 2 cut(s) 280, 363
Bsp1286I GDGCHC 7 cut(s) 35, 182, 284, 367, 404, 474, 636
Bsp1407I TGTACA 1 cut(s) 932
Bsp1720I GCTNAGC 4 cut(s) 29, 194, 473, 1298
BspACI CCGC 7 cut(s) 220, 285, 302, 330, 333, 336, 453
BspANI GGCC 7 cut(s) 207, 282, 365, 371, 857, 1091, 1238
BspDI ATCGAT 1 cut(s) 255
BspFNI CGCG 1 cut(s) 243
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 9 cut(s) 282, 283, 365, 366, 591, 806, 1336, 1337, 1615
BspMAI CTGCAG 2 cut(s) 718, 1425
BspMI ACCTGC 1 cut(s) 1153
BspPI GGATC 4 cut(s) 218, 233, 262, 342
BspT104I TTCGAA 1 cut(s) 494
BspT107I GGYRCC 1 cut(s) 589
BspTNI GGTCTC 1 cut(s) 983
BsrDI GCAATG 2 cut(s) 418, 1335
BsrFI RCCGGY 1 cut(s) 1353
BsrGI TGTACA 1 cut(s) 932
BsrI ACTGG 3 cut(s) 282, 1099, 1184
BssAI RCCGGY 1 cut(s) 1353
BssECI CCNNGG 6 cut(s) 234, 235, 366, 372, 480, 773
BssT1I CCWWGG 1 cut(s) 773
Bst2UI CCWGG 3 cut(s) 200, 374, 673
Bst4CI ACNGT 2 cut(s) 316, 1120
Bst6I CTCTTC 1 cut(s) 783
BstAPI GCANNNNNTGC 2 cut(s) 1510, 1557
BstAUI TGTACA 1 cut(s) 932
BstBI TTCGAA 1 cut(s) 494
BstC8I GCNNGC 1 cut(s) 718
BstENI CCTNNNNNAGG 1 cut(s) 1025
BstF5I GGATG 1 cut(s) 652
BstFNI CGCG 1 cut(s) 243
BstH2I RGCGCY 1 cut(s) 667
BstHHI GCGC 1 cut(s) 666
BstMAI GTCTC 6 cut(s) 250, 840, 983, 1082, 1121, 1159
BstMWI GCNNNNNNNGC 7 cut(s) 204, 399, 408, 450, 1204, 1510, 1557
BstNI CCWGG 3 cut(s) 200, 374, 673
BstSCI CCNGG 7 cut(s) 198, 234, 235, 360, 366, 372, 671
BstSFI CTRYAG 2 cut(s) 714, 1421
BstSLI GKGCMC 2 cut(s) 284, 367
BstUI CGCG 1 cut(s) 243
BstV1I GCAGC 3 cut(s) 37, 1170, 1407
BstV2I GAAGAC 1 cut(s) 1056
BstX2I RGATCY 2 cut(s) 225, 347
BstYI RGATCY 2 cut(s) 225, 347
Bsu15I ATCGAT 1 cut(s) 255
Bsu36I CCTNAGG 1 cut(s) 594
BsuRI GGCC 7 cut(s) 207, 282, 365, 371, 857, 1091, 1238
BsuTUI ATCGAT 1 cut(s) 255
BtsCI GGATG 1 cut(s) 652
BtsIMutI CAGTG 3 cut(s) 529, 1002, 1092
BveI ACCTGC 1 cut(s) 1153
Cac8I GCNNGC 1 cut(s) 718
CaiI CAGNNNCTG 1 cut(s) 277
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 1 cut(s) 666
Cfr10I RCCGGY 1 cut(s) 1353
Cfr9I CCCGGG 1 cut(s) 235
ClaI ATCGAT 1 cut(s) 255
CseI GACGC 1 cut(s) 232
Csp6I GTAC 2 cut(s) 590, 933
CviAII CATG 8 cut(s) 48, 637, 724, 953, 1016, 1056, 1265, 1386
CviQI GTAC 2 cut(s) 590, 933
DraI TTTAAA 1 cut(s) 753
EaeI YGGCCR 1 cut(s) 855
Eam1104I CTCTTC 1 cut(s) 783
EarI CTCTTC 1 cut(s) 783
EciI GGCGGA 2 cut(s) 291, 319
Ecl136II GAGCTC 4 cut(s) 33, 402, 472, 634
Eco130I CCWWGG 1 cut(s) 773
Eco24I GRGCYC 6 cut(s) 35, 284, 367, 404, 474, 636
Eco31I GGTCTC 1 cut(s) 983
Eco47I GGWCC 3 cut(s) 1009, 1335, 1394
Eco53kI GAGCTC 4 cut(s) 33, 402, 472, 634
Eco57I CTGAAG 3 cut(s) 980, 1236, 1364
Eco81I CCTNAGG 1 cut(s) 594
Eco88I CYCGRG 1 cut(s) 235
EcoICRI GAGCTC 4 cut(s) 33, 402, 472, 634
EcoNI CCTNNNNNAGG 1 cut(s) 1025
EcoO109I RGGNCCY 3 cut(s) 281, 364, 1335
EcoRI GAATTC 1 cut(s) 496
EcoRII CCWGG 3 cut(s) 198, 372, 671
EcoT14I CCWWGG 1 cut(s) 773
EcoT22I ATGCAT 1 cut(s) 1266
EcoT38I GRGCYC 6 cut(s) 35, 284, 367, 404, 474, 636
ErhI CCWWGG 1 cut(s) 773
Esp3I CGTCTC 1 cut(s) 250
FaeI CATG 8 cut(s) 51, 640, 727, 956, 1019, 1059, 1268, 1389
FalI AAGNNNNNCTT 2 cut(s) 725, 757
FaqI GGGAC 3 cut(s) 146, 217, 1348
FatI CATG 8 cut(s) 47, 636, 723, 952, 1015, 1055, 1264, 1385
FauI CCCGC 3 cut(s) 227, 292, 446
FbaI TGATCA 2 cut(s) 378, 519
Fnu4HI GCNGC 5 cut(s) 26, 333, 336, 1184, 1421
FokI GGATG 1 cut(s) 659
FriOI GRGCYC 6 cut(s) 35, 284, 367, 404, 474, 636
Fsp4HI GCNGC 5 cut(s) 26, 333, 336, 1184, 1421
FspBI CTAG 2 cut(s) 843, 1070
GlaI GCGC 1 cut(s) 665
GluI GCNGC 5 cut(s) 26, 333, 336, 1184, 1421
GsaI CCCAGC 1 cut(s) 168
GsuI CTGGAG 1 cut(s) 655
HaeII RGCGCY 1 cut(s) 667
HaeIII GGCC 7 cut(s) 207, 282, 365, 371, 857, 1091, 1238
HapII CCGG 7 cut(s) 208, 223, 236, 361, 368, 513, 1354
HgaI GACGC 1 cut(s) 232
HhaI GCGC 1 cut(s) 666
Hin1II CATG 8 cut(s) 51, 640, 727, 956, 1019, 1059, 1268, 1389
Hin6I GCGC 1 cut(s) 664
HinP1I GCGC 1 cut(s) 664
HindIII AAGCTT 1 cut(s) 797
HinfI GANTC 7 cut(s) 86, 257, 320, 875, 884, 1361, 1634
HpaII CCGG 7 cut(s) 208, 223, 236, 361, 368, 513, 1354
HphI GGTGA 3 cut(s) 388, 649, 916
Hpy166II GTNNAC 2 cut(s) 729, 813
Hpy188III TCNNGA 9 cut(s) 15, 94, 467, 761, 903, 1016, 1365, 1582, 1638
Hpy8I GTNNAC 2 cut(s) 729, 813
Hpy99I CGWCG 7 cut(s) 21, 45, 320, 556, 559, 562, 565
HpyAV CCTTC 5 cut(s) 100, 1000, 1117, 1429, 1588
HpyCH4III ACNGT 2 cut(s) 316, 1120
HpyCH4IV ACGT 1 cut(s) 1150
HpyCH4V TGCA 9 cut(s) 716, 836, 941, 947, 987, 1264, 1313, 1328, 1423
HpyF10VI GCNNNNNNNGC 7 cut(s) 204, 399, 408, 450, 1204, 1510, 1557
HpySE526I ACGT 1 cut(s) 1150
Hsp92II CATG 8 cut(s) 51, 640, 727, 956, 1019, 1059, 1268, 1389
HspAI GCGC 1 cut(s) 664
KflI GGGWCCC 1 cut(s) 1335
KpnI GGTACC 1 cut(s) 593
Ksp22I TGATCA 2 cut(s) 378, 519
LmnI GCTCC 5 cut(s) 173, 407, 482, 502, 1619
Lsp1109I GCAGC 3 cut(s) 37, 1170, 1407
LweI GCATC 3 cut(s) 729, 823, 928
MaeI CTAG 2 cut(s) 843, 1070
MaeII ACGT 1 cut(s) 1150
MaeIII GTNAC 1 cut(s) 539
MboII GAAGA 7 cut(s) 315, 797, 800, 1043, 1056, 1229, 1370
MflI RGATCY 2 cut(s) 225, 347
MhlI GDGCHC 7 cut(s) 35, 182, 284, 367, 404, 474, 636
MlsI TGGCCA 1 cut(s) 857
MluCI AATT 5 cut(s) 433, 496, 582, 604, 1314
MluNI TGGCCA 1 cut(s) 857
MlyI GAGTC 2 cut(s) 869, 1370
MmeI TCCRAC 3 cut(s) 108, 177, 1412
Mox20I TGGCCA 1 cut(s) 857
Mph1103I ATGCAT 1 cut(s) 1266
MroXI GAANNNNTTC 1 cut(s) 1527
MscI TGGCCA 1 cut(s) 857
MseI TTAA 3 cut(s) 752, 822, 1257
Msp20I TGGCCA 1 cut(s) 857
MspA1I CMGCKG 1 cut(s) 28
MspI CCGG 7 cut(s) 208, 223, 236, 361, 368, 513, 1354
MspR9I CCNGG 7 cut(s) 200, 236, 237, 362, 368, 374, 673
MvaI CCWGG 3 cut(s) 200, 374, 673
MvnI CGCG 1 cut(s) 243
MwoI GCNNNNNNNGC 7 cut(s) 204, 399, 408, 450, 1204, 1510, 1557
NciI CCSGG 4 cut(s) 236, 237, 362, 368
NlaIII CATG 8 cut(s) 51, 640, 727, 956, 1019, 1059, 1268, 1389
NlaIV GGNNCC 9 cut(s) 282, 283, 365, 366, 591, 806, 1336, 1337, 1615
NmeAIII GCCGAG 3 cut(s) 412, 1264, 1328
NsiI ATGCAT 1 cut(s) 1266
NspV TTCGAA 1 cut(s) 494
PagI TCATGA 1 cut(s) 1015
PcsI WCGNNNNNNNCGW 2 cut(s) 557, 566
PdmI GAANNNNTTC 1 cut(s) 1527
PfeI GAWTC 5 cut(s) 86, 257, 320, 884, 1634
PflFI GACNNNGTC 1 cut(s) 878
PflMI CCANNNNNTGG 2 cut(s) 127, 277
PfoI TCCNGGA 1 cut(s) 671
PkrI GCNGC 5 cut(s) 27, 334, 337, 1185, 1422
PleI GAGTC 2 cut(s) 869, 1369
PpsI GAGTC 2 cut(s) 869, 1369
PpuMI RGGWCCY 1 cut(s) 1335
Psp124BI GAGCTC 4 cut(s) 35, 404, 474, 636
Psp5II RGGWCCY 1 cut(s) 1335
Psp6I CCWGG 3 cut(s) 198, 372, 671
PspFI CCCAGC 1 cut(s) 164
PspGI CCWGG 3 cut(s) 198, 372, 671
PspN4I GGNNCC 9 cut(s) 282, 283, 365, 366, 591, 806, 1336, 1337, 1615
PspOMI GGGCCC 2 cut(s) 280, 363
PspPPI RGGWCCY 1 cut(s) 1335
PstI CTGCAG 2 cut(s) 718, 1425
PstNI CAGNNNCTG 1 cut(s) 277
PsuI RGATCY 2 cut(s) 225, 347
PsyI GACNNNGTC 1 cut(s) 878
PvuII CAGCTG 1 cut(s) 28
RsaI GTAC 2 cut(s) 591, 934
RsaNI GTAC 2 cut(s) 590, 933
SacI GAGCTC 4 cut(s) 35, 404, 474, 636
SaqAI TTAA 3 cut(s) 752, 822, 1257
SatI GCNGC 5 cut(s) 26, 333, 336, 1184, 1421
SchI GAGTC 2 cut(s) 869, 1370
ScrFI CCNGG 7 cut(s) 200, 236, 237, 362, 368, 374, 673
SduI GDGCHC 7 cut(s) 35, 182, 284, 367, 404, 474, 636
SfaNI GCATC 3 cut(s) 729, 823, 928
SfcI CTRYAG 2 cut(s) 714, 1421
SfuI TTCGAA 1 cut(s) 494
SinI GGWCC 3 cut(s) 1009, 1335, 1394
SmaI CCCGGG 1 cut(s) 237
SmlI CTYRAG 5 cut(s) 76, 467, 704, 761, 1156
SmoI CTYRAG 5 cut(s) 76, 467, 704, 761, 1156
SpeI ACTAGT 1 cut(s) 1069
Sse9I AATT 5 cut(s) 433, 496, 582, 604, 1314
SsiI CCGC 7 cut(s) 220, 285, 302, 330, 333, 336, 453
SspMI CTAG 2 cut(s) 843, 1070
SstI GAGCTC 4 cut(s) 35, 404, 474, 636
StyD4I CCNGG 7 cut(s) 198, 234, 235, 360, 366, 372, 671
StyI CCWWGG 1 cut(s) 773
TaaI ACNGT 2 cut(s) 316, 1120
TaiI ACGT 1 cut(s) 1153
TasI AATT 5 cut(s) 433, 496, 582, 604, 1314
TatI WGTACW 1 cut(s) 932
TauI GCSGC 2 cut(s) 335, 338
TfiI GAWTC 5 cut(s) 86, 257, 320, 884, 1634
Tru1I TTAA 3 cut(s) 752, 822, 1257
Tru9I TTAA 3 cut(s) 752, 822, 1257
TscAI CASTG 3 cut(s) 529, 1002, 1099
TseI GCWGC 3 cut(s) 25, 1183, 1420
TspDTI ATGAA 1 cut(s) 906
TspGWI ACGGA 1 cut(s) 148
TspMI CCCGGG 1 cut(s) 235
TspRI CASTG 3 cut(s) 529, 1002, 1099
Tth111I GACNNNGTC 1 cut(s) 878
Van91I CCANNNNNTGG 2 cut(s) 127, 277
VpaK11BI GGWCC 3 cut(s) 1009, 1335, 1394
XagI CCTNNNNNAGG 1 cut(s) 1025
XapI RAATTY 3 cut(s) 433, 496, 604
XmaI CCCGGG 1 cut(s) 235
XmnI GAANNNNTTC 1 cut(s) 1527
XspI CTAG 2 cut(s) 843, 1070
Zsp2I ATGCAT 1 cut(s) 1266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.