FvH4_1g29340

phosphatase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
22336992 .. 22337721
730 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29340.t1

Sequence Viewer

Length: 399 bp
ATGGCTTCTTATCTCAATCTGACCCAAAAGCTTCGATCTTTGCTGCAACCCTGTGTGGCCCACCACTTCATCACAGGCACGCCCCTCATCCTCCAGATCCAGAATTACCAGCATAGGTTCTTGGATGCTTTCTTCTCTGCCTTGTCATGTGTTGTTTCTGTGCCTTTCTACACTGCATTTCTTCCTTTGATTTTCTGGAGTGGGCATGGCAAATTGGCAAGGCAAATGACCCTCTTGATGGCTTTCTGTGATTACTTGGGGAACTATGTGGTATCAGCTCCTAGACCGAGTTGCCCTCCGGTTAGGAGAATAACAGTGACAAGAGATGAGGAGGATAATGCATTGGAATATGGATTGCCATCTTCTCACACTCTAAACACAGTTTGCTTGTCTGGGTAA

Protein Analysis

133

Amino Acids

14.82

Weight (kDa)

8.34

Isoelectric Point (pI)

49.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 91
AfiI CCNNNNNNNGG 1 cut(s) 238
AluBI AGCT 2 cut(s) 31, 278
AluI AGCT 2 cut(s) 31, 278
AlwI GGATC 1 cut(s) 91
AoxI GGCC 1 cut(s) 57
ApeKI GCWGC 1 cut(s) 43
AspS9I GGNCC 1 cut(s) 58
BbvI GCAGC 1 cut(s) 30
BccI CCATC 2 cut(s) 232, 367
BfaI CTAG 1 cut(s) 282
BisI GCNGC 1 cut(s) 44
BlsI GCNGC 1 cut(s) 45
BmgT120I GGNCC 1 cut(s) 58
BmsI GCATC 1 cut(s) 115
BplI GAGNNNNNCTC 2 cut(s) 280, 312
BpmI CTGGAG 2 cut(s) 77, 217
BsaBI GATNNNNATC 1 cut(s) 358
BsaWI WCCGGW 1 cut(s) 298
Bsc4I CCNNNNNNNGG 1 cut(s) 238
Bse8I GATNNNNATC 1 cut(s) 358
BseGI GGATG 2 cut(s) 87, 130
BseJI GATNNNNATC 1 cut(s) 358
BseLI CCNNNNNNNGG 1 cut(s) 238
BseRI GAGGAG 1 cut(s) 344
BseXI GCAGC 1 cut(s) 30
BshFI GGCC 1 cut(s) 59
BsiSI CCGG 1 cut(s) 299
BslI CCNNNNNNNGG 1 cut(s) 238
BsnI GGCC 1 cut(s) 59
Bsp143I GATC 2 cut(s) 35, 96
BspANI GGCC 1 cut(s) 59
BspPI GGATC 1 cut(s) 91
BssMI GATC 2 cut(s) 35, 96
Bst4CI ACNGT 2 cut(s) 316, 382
BstC8I GCNNGC 1 cut(s) 80
BstF5I GGATG 2 cut(s) 87, 130
BstKTI GATC 2 cut(s) 38, 99
BstMBI GATC 2 cut(s) 35, 96
BstV1I GCAGC 1 cut(s) 30
BstX2I RGATCY 1 cut(s) 96
BstYI RGATCY 1 cut(s) 96
BsuRI GGCC 1 cut(s) 59
BtsCI GGATG 2 cut(s) 87, 130
BtsI GCAGTG 1 cut(s) 171
BtsIMutI CAGTG 2 cut(s) 171, 321
Cac8I GCNNGC 1 cut(s) 80
Cfr13I GGNCC 1 cut(s) 58
CviAII CATG 2 cut(s) 147, 206
CviJI RGCY 5 cut(s) 5, 31, 59, 242, 278
CviKI_1 RGCY 5 cut(s) 5, 31, 59, 242, 278
DpnI GATC 2 cut(s) 37, 98
DpnII GATC 2 cut(s) 35, 96
EcoT22I ATGCAT 1 cut(s) 343
FaeI CATG 2 cut(s) 150, 209
FaiI YATR 5 cut(s) 114, 148, 207, 267, 351
FatI CATG 2 cut(s) 146, 205
Fnu4HI GCNGC 1 cut(s) 44
FokI GGATG 2 cut(s) 74, 137
Fsp4HI GCNGC 1 cut(s) 44
FspBI CTAG 1 cut(s) 282
GluI GCNGC 1 cut(s) 44
GsuI CTGGAG 2 cut(s) 77, 217
HaeIII GGCC 1 cut(s) 59
HapII CCGG 1 cut(s) 299
Hin1II CATG 2 cut(s) 150, 209
HindIII AAGCTT 1 cut(s) 29
HpaII CCGG 1 cut(s) 299
Hpy188I TCNGA 1 cut(s) 21
Hpy188III TCNNGA 4 cut(s) 94, 100, 196, 235
HpyCH4III ACNGT 2 cut(s) 316, 382
HpyCH4V TGCA 3 cut(s) 46, 176, 341
Hsp92II CATG 2 cut(s) 150, 209
Kzo9I GATC 2 cut(s) 35, 96
LmnI GCTCC 1 cut(s) 283
LpnPI CCDG 8 cut(s) 60, 64, 107, 113, 122, 181, 312, 378
Lsp1109I GCAGC 1 cut(s) 30
LweI GCATC 1 cut(s) 115
MaeI CTAG 1 cut(s) 282
MaeIII GTNAC 1 cut(s) 316
MalI GATC 2 cut(s) 37, 98
MboI GATC 2 cut(s) 35, 96
MboII GAAGA 3 cut(s) 124, 173, 354
MflI RGATCY 1 cut(s) 96
MluCI AATT 2 cut(s) 103, 212
MnlI CCTC 6 cut(s) 95, 101, 242, 306, 322, 325
Mph1103I ATGCAT 1 cut(s) 343
MspI CCGG 1 cut(s) 299
NdeII GATC 2 cut(s) 35, 96
NlaIII CATG 2 cut(s) 150, 209
NmuCI GTSAC 1 cut(s) 316
NsiI ATGCAT 1 cut(s) 343
PkrI GCNGC 1 cut(s) 45
PspPI GGNCC 1 cut(s) 58
PsuI RGATCY 1 cut(s) 96
SatI GCNGC 1 cut(s) 44
Sau3AI GATC 2 cut(s) 35, 96
Sau96I GGNCC 1 cut(s) 58
SetI ASST 3 cut(s) 33, 119, 280
SfaNI GCATC 1 cut(s) 115
Sse9I AATT 2 cut(s) 103, 212
SspMI CTAG 1 cut(s) 282
TaaI ACNGT 2 cut(s) 316, 382
TaqI TCGA 1 cut(s) 34
TaqII GACCGA 1 cut(s) 301
TasI AATT 2 cut(s) 103, 212
TscAI CASTG 2 cut(s) 178, 321
TseFI GTSAC 1 cut(s) 316
TseI GCWGC 1 cut(s) 43
Tsp45I GTSAC 1 cut(s) 316
TspDTI ATGAA 1 cut(s) 58
TspRI CASTG 2 cut(s) 178, 321
XspI CTAG 1 cut(s) 282
Zsp2I ATGCAT 1 cut(s) 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.