Synaptotagmin-like mitochondrial-lipid-binding domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20990 AT2G20990 AT2G20990 AT2G21010 |
| fragaria_vesca | FvH4_2g01300 FvH4_2g01300 |
| malus_domestica | MD05G1120700.v1.1 |
| prunus_persica | Prupe.8G164600_v2.0.a1 Prupe.8G164600_v2.0.a1 Prupe.8G164600_v2.0.a1 |
| pyrus_communis | pycom05g11460 |
| rosa_chinensis | RchiOBHm_Chr6g0252191 |
| rosa_laevigata | RLG00000015404 |
| rosa_multiflora | Rmu_sc0002522.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00216260 |
| rosa_rugosa | Rorug05G0505900.1 |
| rosa_samantha | Rh6AG019800 Rh6BG015200 Rh6CG012200 Rh6DG013500 |
| rosa_wichuraiana | Rw6G000080 Rw6G001620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1164 |
| AatII | GACGTC | 1 cut(s) | 1527 |
| Acc16I | TGCGCA | 1 cut(s) | 516 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 441, 1247 |
| AccBSI | CCGCTC | 1 cut(s) | 160 |
| AccII | CGCG | 1 cut(s) | 1175 |
| AciI | CCGC | 2 cut(s) | 160, 1175 |
| AclWI | GGATC | 3 cut(s) | 834, 1109, 1370 |
| AcsI | RAATTY | 4 cut(s) | 120, 227, 341, 938 |
| AcuI | CTGAAG | 2 cut(s) | 825, 1251 |
| AcyI | GRCGYC | 1 cut(s) | 1524 |
| AdeI | CACNNNGTG | 1 cut(s) | 1247 |
| AfaI | GTAC | 4 cut(s) | 323, 738, 1456, 1556 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 441, 768, 793, 1247, 1250 |
| AflIII | ACRYGT | 2 cut(s) | 708, 1438 |
| AjnI | CCWGG | 4 cut(s) | 658, 678, 696, 1243 |
| AluBI | AGCT | 8 cut(s) | 352, 418, 564, 631, 865, 1144, 1591, 1597 |
| AluI | AGCT | 8 cut(s) | 352, 418, 564, 631, 865, 1144, 1591, 1597 |
| Alw26I | GTCTC | 1 cut(s) | 597 |
| AlwI | GGATC | 3 cut(s) | 834, 1109, 1370 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 497 |
| AoxI | GGCC | 5 cut(s) | 245, 661, 719, 770, 1471 |
| ApeKI | GCWGC | 5 cut(s) | 446, 470, 1141, 1477, 1597 |
| ApoI | RAATTY | 4 cut(s) | 120, 227, 341, 938 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1395 |
| AspLEI | GCGC | 1 cut(s) | 517 |
| AspS9I | GGNCC | 8 cut(s) | 112, 556, 720, 748, 1051, 1087, 1471, 1585 |
| AsuHPI | GGTGA | 2 cut(s) | 199, 522 |
| AvaII | GGWCC | 6 cut(s) | 112, 556, 748, 1051, 1087, 1585 |
| BbsI | GAAGAC | 1 cut(s) | 899 |
| BbvCI | CCTCAGC | 1 cut(s) | 306 |
| BbvI | GCAGC | 5 cut(s) | 433, 457, 1153, 1464, 1584 |
| BccI | CCATC | 5 cut(s) | 817, 892, 1321, 1377, 1566 |
| BceAI | ACGGC | 1 cut(s) | 112 |
| BciT130I | CCWGG | 4 cut(s) | 660, 680, 698, 1245 |
| BclI | TGATCA | 1 cut(s) | 136 |
| BcoDI | GTCTC | 1 cut(s) | 597 |
| BfaI | CTAG | 2 cut(s) | 44, 1592 |
| BfmI | CTRYAG | 1 cut(s) | 774 |
| BglII | AGATCT | 1 cut(s) | 1285 |
| BisI | GCNGC | 5 cut(s) | 447, 471, 1142, 1478, 1598 |
| BlsI | GCNGC | 5 cut(s) | 448, 472, 1143, 1479, 1599 |
| Bme1390I | CCNGG | 4 cut(s) | 660, 680, 698, 1245 |
| Bme18I | GGWCC | 6 cut(s) | 112, 556, 748, 1051, 1087, 1585 |
| BmgT120I | GGNCC | 8 cut(s) | 112, 556, 720, 748, 1051, 1087, 1471, 1585 |
| BmiI | GGNNCC | 6 cut(s) | 114, 364, 429, 558, 750, 1227 |
| BmrFI | CCNGG | 4 cut(s) | 660, 680, 698, 1245 |
| BmrI | ACTGGG | 1 cut(s) | 1006 |
| BmsI | GCATC | 2 cut(s) | 153, 502 |
| BmuI | ACTGGG | 1 cut(s) | 1006 |
| BpiI | GAAGAC | 1 cut(s) | 899 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1242, 1274 |
| Bpu10I | CCTNAGC | 1 cut(s) | 306 |
| BpuEI | CTTGAG | 1 cut(s) | 1166 |
| BsaAI | YACGTR | 1 cut(s) | 536 |
| BsaHI | GRCGYC | 1 cut(s) | 1524 |
| BsaJI | CCNNGG | 1 cut(s) | 1135 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 441, 768, 793, 1247, 1250 |
| Bse1I | ACTGG | 1 cut(s) | 1001 |
| Bse3DI | GCAATG | 2 cut(s) | 813, 1607 |
| BseBI | CCWGG | 4 cut(s) | 660, 680, 698, 1245 |
| BseDI | CCNNGG | 1 cut(s) | 1135 |
| BseGI | GGATG | 1 cut(s) | 168 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 441, 768, 793, 1247, 1250 |
| BseMI | GCAATG | 2 cut(s) | 813, 1607 |
| BseMII | CTCAG | 5 cut(s) | 162, 297, 983, 1133, 1345 |
| BseNI | ACTGG | 1 cut(s) | 1001 |
| BseRI | GAGGAG | 1 cut(s) | 1193 |
| BseXI | GCAGC | 5 cut(s) | 433, 457, 1153, 1464, 1584 |
| BseYI | CCCAGC | 1 cut(s) | 751 |
| Bsh1236I | CGCG | 1 cut(s) | 1175 |
| BshFI | GGCC | 5 cut(s) | 247, 663, 721, 772, 1473 |
| BslFI | GGGAC | 1 cut(s) | 542 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 441, 768, 793, 1247, 1250 |
| BsmAI | GTCTC | 1 cut(s) | 597 |
| BsmFI | GGGAC | 1 cut(s) | 542 |
| BsnI | GGCC | 5 cut(s) | 247, 663, 721, 772, 1473 |
| Bsp143I | GATC | 8 cut(s) | 136, 205, 264, 643, 826, 1114, 1285, 1375 |
| BspACI | CCGC | 2 cut(s) | 160, 1175 |
| BspANI | GGCC | 5 cut(s) | 247, 663, 721, 772, 1473 |
| BspCNI | CTCAG | 5 cut(s) | 163, 298, 982, 1132, 1344 |
| BspFNI | CGCG | 1 cut(s) | 1175 |
| BspHI | TCATGA | 1 cut(s) | 1273 |
| BspLI | GGNNCC | 6 cut(s) | 114, 364, 429, 558, 750, 1227 |
| BspPI | GGATC | 3 cut(s) | 834, 1109, 1370 |
| BspQI | GCTCTTC | 1 cut(s) | 1361 |
| BsrBI | CCGCTC | 1 cut(s) | 160 |
| BsrDI | GCAATG | 2 cut(s) | 813, 1607 |
| BsrI | ACTGG | 1 cut(s) | 1001 |
| BssECI | CCNNGG | 1 cut(s) | 1135 |
| BssMI | GATC | 8 cut(s) | 136, 205, 264, 643, 826, 1114, 1285, 1375 |
| BssNI | GRCGYC | 1 cut(s) | 1524 |
| Bst2UI | CCWGG | 4 cut(s) | 660, 680, 698, 1245 |
| Bst4CI | ACNGT | 2 cut(s) | 499, 1136 |
| Bst6I | CTCTTC | 2 cut(s) | 1361, 1386 |
| BstACI | GRCGYC | 1 cut(s) | 1524 |
| BstBAI | YACGTR | 1 cut(s) | 536 |
| BstC8I | GCNNGC | 2 cut(s) | 70, 1475 |
| BstDEI | CTNAG | 6 cut(s) | 171, 306, 800, 969, 1119, 1331 |
| BstDSI | CCRYGG | 1 cut(s) | 1135 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 766, 1248 |
| BstF5I | GGATG | 1 cut(s) | 168 |
| BstFNI | CGCG | 1 cut(s) | 1175 |
| BstHHI | GCGC | 1 cut(s) | 517 |
| BstKTI | GATC | 8 cut(s) | 139, 208, 267, 646, 829, 1117, 1288, 1378 |
| BstMAI | GTCTC | 1 cut(s) | 597 |
| BstMBI | GATC | 8 cut(s) | 136, 205, 264, 643, 826, 1114, 1285, 1375 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 476, 1597 |
| BstNI | CCWGG | 4 cut(s) | 660, 680, 698, 1245 |
| BstNSI | RCATGY | 2 cut(s) | 712, 1442 |
| BstSCI | CCNGG | 4 cut(s) | 658, 678, 696, 1243 |
| BstSFI | CTRYAG | 1 cut(s) | 774 |
| BstUI | CGCG | 1 cut(s) | 1175 |
| BstV1I | GCAGC | 5 cut(s) | 433, 457, 1153, 1464, 1584 |
| BstV2I | GAAGAC | 1 cut(s) | 899 |
| BstX2I | RGATCY | 3 cut(s) | 826, 1285, 1375 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 154 |
| BstYI | RGATCY | 3 cut(s) | 826, 1285, 1375 |
| BsuRI | GGCC | 5 cut(s) | 247, 663, 721, 772, 1473 |
| BtgI | CCRYGG | 1 cut(s) | 1135 |
| BtsCI | GGATG | 1 cut(s) | 168 |
| Cac8I | GCNNGC | 2 cut(s) | 70, 1475 |
| CaiI | CAGNNNCTG | 1 cut(s) | 497 |
| CciI | TCATGA | 1 cut(s) | 1273 |
| CfoI | GCGC | 1 cut(s) | 517 |
| Cfr13I | GGNCC | 8 cut(s) | 112, 556, 720, 748, 1051, 1087, 1471, 1585 |
| CsiI | ACCWGGT | 2 cut(s) | 696, 1243 |
| Csp6I | GTAC | 4 cut(s) | 322, 737, 1455, 1555 |
| CviAII | CATG | 6 cut(s) | 598, 709, 1016, 1274, 1439, 1481 |
| CviQI | GTAC | 4 cut(s) | 322, 737, 1455, 1555 |
| DdeI | CTNAG | 6 cut(s) | 171, 306, 800, 969, 1119, 1331 |
| DpnI | GATC | 8 cut(s) | 138, 207, 266, 645, 828, 1116, 1287, 1377 |
| DpnII | GATC | 8 cut(s) | 136, 205, 264, 643, 826, 1114, 1285, 1375 |
| DraIII | CACNNNGTG | 1 cut(s) | 1247 |
| Eam1104I | CTCTTC | 2 cut(s) | 1361, 1386 |
| EarI | CTCTTC | 2 cut(s) | 1361, 1386 |
| Eco147I | AGGCCT | 1 cut(s) | 772 |
| Eco47I | GGWCC | 6 cut(s) | 112, 556, 748, 1051, 1087, 1585 |
| Eco57I | CTGAAG | 2 cut(s) | 825, 1251 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 766, 1248 |
| EcoO109I | RGGNCCY | 2 cut(s) | 112, 1051 |
| EcoRII | CCWGG | 4 cut(s) | 658, 678, 696, 1243 |
| FaeI | CATG | 6 cut(s) | 601, 712, 1019, 1277, 1442, 1484 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 553, 585 |
| FaqI | GGGAC | 1 cut(s) | 542 |
| FatI | CATG | 6 cut(s) | 597, 708, 1015, 1273, 1438, 1480 |
| FauNDI | CATATG | 2 cut(s) | 481, 673 |
| FbaI | TGATCA | 1 cut(s) | 136 |
| Fnu4HI | GCNGC | 5 cut(s) | 447, 471, 1142, 1478, 1598 |
| FokI | GGATG | 1 cut(s) | 175 |
| Fsp4HI | GCNGC | 5 cut(s) | 447, 471, 1142, 1478, 1598 |
| FspBI | CTAG | 2 cut(s) | 44, 1592 |
| FspI | TGCGCA | 1 cut(s) | 516 |
| GlaI | GCGC | 1 cut(s) | 516 |
| GluI | GCNGC | 5 cut(s) | 447, 471, 1142, 1478, 1598 |
| GsaI | CCCAGC | 1 cut(s) | 755 |
| HaeIII | GGCC | 5 cut(s) | 247, 663, 721, 772, 1473 |
| HhaI | GCGC | 1 cut(s) | 517 |
| Hin1I | GRCGYC | 1 cut(s) | 1524 |
| Hin1II | CATG | 6 cut(s) | 601, 712, 1019, 1277, 1442, 1484 |
| Hin6I | GCGC | 1 cut(s) | 515 |
| HinP1I | GCGC | 1 cut(s) | 515 |
| HindIII | AAGCTT | 2 cut(s) | 562, 629 |
| HinfI | GANTC | 9 cut(s) | 6, 60, 193, 332, 486, 1081, 1490, 1542, 1568 |
| HphI | GGTGA | 2 cut(s) | 199, 522 |
| Hpy166II | GTNNAC | 1 cut(s) | 616 |
| Hpy188I | TCNGA | 4 cut(s) | 103, 844, 1122, 1522 |
| Hpy8I | GTNNAC | 1 cut(s) | 616 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 9 cut(s) | 385, 406, 787, 1042, 1180, 1216, 1226, 1271, 1286 |
| HpyCH4III | ACNGT | 2 cut(s) | 499, 1136 |
| HpyCH4IV | ACGT | 3 cut(s) | 535, 1035, 1524 |
| HpyCH4V | TGCA | 6 cut(s) | 270, 290, 449, 1189, 1480, 1600 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 476, 1597 |
| HpyF3I | CTNAG | 6 cut(s) | 171, 306, 800, 969, 1119, 1331 |
| HpySE526I | ACGT | 3 cut(s) | 535, 1035, 1524 |
| Hsp92I | GRCGYC | 1 cut(s) | 1524 |
| Hsp92II | CATG | 6 cut(s) | 601, 712, 1019, 1277, 1442, 1484 |
| HspAI | GCGC | 1 cut(s) | 515 |
| Ksp22I | TGATCA | 1 cut(s) | 136 |
| Kzo9I | GATC | 8 cut(s) | 136, 205, 264, 643, 826, 1114, 1285, 1375 |
| LguI | GCTCTTC | 1 cut(s) | 1361 |
| LmnI | GCTCC | 3 cut(s) | 157, 415, 1231 |
| Lsp1109I | GCAGC | 5 cut(s) | 433, 457, 1153, 1464, 1584 |
| LweI | GCATC | 2 cut(s) | 153, 502 |
| MabI | ACCWGGT | 2 cut(s) | 696, 1243 |
| MaeI | CTAG | 2 cut(s) | 44, 1592 |
| MaeII | ACGT | 3 cut(s) | 535, 1035, 1524 |
| MaeIII | GTNAC | 1 cut(s) | 400 |
| MalI | GATC | 8 cut(s) | 138, 207, 266, 645, 828, 1116, 1287, 1377 |
| MbiI | CCGCTC | 1 cut(s) | 160 |
| MboI | GATC | 8 cut(s) | 136, 205, 264, 643, 826, 1114, 1285, 1375 |
| MflI | RGATCY | 3 cut(s) | 826, 1285, 1375 |
| MluCI | AATT | 8 cut(s) | 120, 227, 300, 341, 938, 1400, 1433, 1466 |
| MlyI | GAGTC | 3 cut(s) | 54, 1075, 1562 |
| MmeI | TCCRAC | 2 cut(s) | 1131, 1557 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1395 |
| MseI | TTAA | 9 cut(s) | 221, 438, 626, 765, 815, 903, 942, 1095, 1109 |
| MspR9I | CCNGG | 4 cut(s) | 660, 680, 698, 1245 |
| MvaI | CCWGG | 4 cut(s) | 660, 680, 698, 1245 |
| MvnI | CGCG | 1 cut(s) | 1175 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 476, 1597 |
| NdeI | CATATG | 2 cut(s) | 481, 673 |
| NdeII | GATC | 8 cut(s) | 136, 205, 264, 643, 826, 1114, 1285, 1375 |
| NlaIII | CATG | 6 cut(s) | 601, 712, 1019, 1277, 1442, 1484 |
| NlaIV | GGNNCC | 6 cut(s) | 114, 364, 429, 558, 750, 1227 |
| NsbI | TGCGCA | 1 cut(s) | 516 |
| NspI | RCATGY | 2 cut(s) | 712, 1442 |
| PagI | TCATGA | 1 cut(s) | 1273 |
| PceI | AGGCCT | 1 cut(s) | 772 |
| PciI | ACATGT | 2 cut(s) | 708, 1438 |
| PciSI | GCTCTTC | 1 cut(s) | 1361 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1395 |
| PfeI | GAWTC | 6 cut(s) | 6, 193, 332, 486, 1490, 1542 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 441, 1247 |
| PfoI | TCCNGGA | 1 cut(s) | 678 |
| PkrI | GCNGC | 5 cut(s) | 448, 472, 1143, 1479, 1599 |
| PleI | GAGTC | 3 cut(s) | 54, 1075, 1562 |
| PpsI | GAGTC | 3 cut(s) | 54, 1075, 1562 |
| Ppu21I | YACGTR | 1 cut(s) | 536 |
| PpuMI | RGGWCCY | 2 cut(s) | 112, 1051 |
| PscI | ACATGT | 2 cut(s) | 708, 1438 |
| PsiI | TTATAA | 1 cut(s) | 1164 |
| Psp5II | RGGWCCY | 2 cut(s) | 112, 1051 |
| Psp6I | CCWGG | 4 cut(s) | 658, 678, 696, 1243 |
| PspFI | CCCAGC | 1 cut(s) | 751 |
| PspGI | CCWGG | 4 cut(s) | 658, 678, 696, 1243 |
| PspN4I | GGNNCC | 6 cut(s) | 114, 364, 429, 558, 750, 1227 |
| PspPI | GGNCC | 8 cut(s) | 112, 556, 720, 748, 1051, 1087, 1471, 1585 |
| PspPPI | RGGWCCY | 2 cut(s) | 112, 1051 |
| PstNI | CAGNNNCTG | 1 cut(s) | 497 |
| PsuI | RGATCY | 3 cut(s) | 826, 1285, 1375 |
| RsaI | GTAC | 4 cut(s) | 323, 738, 1456, 1556 |
| RsaNI | GTAC | 4 cut(s) | 322, 737, 1455, 1555 |
| SapI | GCTCTTC | 1 cut(s) | 1361 |
| SaqAI | TTAA | 9 cut(s) | 221, 438, 626, 765, 815, 903, 942, 1095, 1109 |
| SatI | GCNGC | 5 cut(s) | 447, 471, 1142, 1478, 1598 |
| Sau3AI | GATC | 8 cut(s) | 136, 205, 264, 643, 826, 1114, 1285, 1375 |
| Sau96I | GGNCC | 8 cut(s) | 112, 556, 720, 748, 1051, 1087, 1471, 1585 |
| SchI | GAGTC | 3 cut(s) | 54, 1075, 1562 |
| ScrFI | CCNGG | 4 cut(s) | 660, 680, 698, 1245 |
| SexAI | ACCWGGT | 2 cut(s) | 696, 1243 |
| SfaNI | GCATC | 2 cut(s) | 153, 502 |
| SfcI | CTRYAG | 1 cut(s) | 774 |
| SinI | GGWCC | 6 cut(s) | 112, 556, 748, 1051, 1087, 1585 |
| SmlI | CTYRAG | 1 cut(s) | 1145 |
| SmoI | CTYRAG | 1 cut(s) | 1145 |
| Sse9I | AATT | 8 cut(s) | 120, 227, 300, 341, 938, 1400, 1433, 1466 |
| SseBI | AGGCCT | 1 cut(s) | 772 |
| SsiI | CCGC | 2 cut(s) | 160, 1175 |
| SspMI | CTAG | 2 cut(s) | 44, 1592 |
| StuI | AGGCCT | 1 cut(s) | 772 |
| StyD4I | CCNGG | 4 cut(s) | 658, 678, 696, 1243 |
| TaaI | ACNGT | 2 cut(s) | 499, 1136 |
| TaiI | ACGT | 3 cut(s) | 538, 1038, 1527 |
| TaqI | TCGA | 2 cut(s) | 53, 1571 |
| TasI | AATT | 8 cut(s) | 120, 227, 300, 341, 938, 1400, 1433, 1466 |
| TatI | WGTACW | 1 cut(s) | 321 |
| TfiI | GAWTC | 6 cut(s) | 6, 193, 332, 486, 1490, 1542 |
| Tru1I | TTAA | 9 cut(s) | 221, 438, 626, 765, 815, 903, 942, 1095, 1109 |
| Tru9I | TTAA | 9 cut(s) | 221, 438, 626, 765, 815, 903, 942, 1095, 1109 |
| TseI | GCWGC | 5 cut(s) | 446, 470, 1141, 1477, 1597 |
| TspDTI | ATGAA | 6 cut(s) | 73, 404, 824, 1218, 1262, 1290 |
| TspGWI | ACGGA | 1 cut(s) | 776 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 441, 1247 |
| VpaK11BI | GGWCC | 6 cut(s) | 112, 556, 748, 1051, 1087, 1585 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 766, 1248 |
| XapI | RAATTY | 4 cut(s) | 120, 227, 341, 938 |
| XceI | RCATGY | 2 cut(s) | 712, 1442 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1395 |
| XspI | CTAG | 2 cut(s) | 44, 1592 |
| ZraI | GACGTC | 1 cut(s) | 1525 |