FvH4_2g07860

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0015508
Physical Location & Seq
Forward (+)
6787942 .. 6789763
1822 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g07860.t1

Sequence Viewer

Length: 1608 bp
ATGCTTGACATTTGGTCATGGATTTGCGAGCTACCCAACTTGTCCCAATGGACCGAGTCGGACCCCTCGTTGGTGTTCGAACTCGCTAGCGCCGGACCGAGTCACGGCAGCTCCGCAACTCAGTCCATCCAACTCAGAGCTGAGCGAAGTTCCGGCTCCAACATCGACACATTGGTCACCTTCTCGGTTTGCTTGCATGGCTTTCAGAACCTCTCCAAGAAGACCCTCTGGGTTTCTGACACGTGTTGTTTGTCTTCAGAGAAGCCGTTCCTCCCTCTCTTACTCCAGCTTCTCCAGGAGATCATATCCCGGTCGCCGACGGCGCACGATAGCACGTGCCCGCGTTCCCAGCTCCAGGCTCTCAAACCCGACCCGCTTTCTTGGGTCATGGACTCACACTCTCCCGAGTCTTTCTCCACCTTCTTCGACCTGGTTTTCATTACGCGGCTCTTCTGGCTGTGCGCGTGTGACGCGCCGAGTGAGGTTGGTTCACTCTACTTCAAGTCCTTGCTGGCTCCTAATATTGAAGGTTTGATGTCTAAGCACGCGCCGGCGCTGCGGACGTTCTTGATCACAGTCGGAGTGGACGCGGAGCTGTGCTTCATGCGTACCCTCGGGTACATGTTAGCAAAATGGTGCATGTTAAGGCAGGTGGGCGTAGGTTTACAGACGCTAACATCTTTGACGGCGCCGTCTCATCAGAATTTAGGATTCTCGTACGCGAACGAGGCTTGCGGGTTTTGGGTGCTGAAGGGATACGCGCCGGTGCTTGGGATGAGAACCACGCGCTCGGTCAACGTTCAGACGAATCAGTTTCCGGTTATGGAAACGACCAAGGACTCGGTGCTGAAGTACGCTCTGGCTCACCAGCAGCTGGAGGCAGTTGTTCAGGTGGAATATTCCGTTGGATTCTATGACGGATTTATTCAGGTGACGGCACATGTCGACAATTTACGTTTCCACGTGGTGACTCTTGGATTCAACAAAAACAATGACGTGGACTATGCTGACGAGAAGTATTTCCCGTCGAGGATACGAGTTTGGGTTGGGCCTGAAGTCGGGGCGAACTATGTGCATGGATTGAGTTTGGGGCGATCCACAGATAACGGGGAGAAAGAAGTGAAAATGCAAAAGATTATGAAGAGTAGTTTCGGCAAGTCAAAAAATCCGAGAGTGAAAGCGGCAATGAGGATGTCCACGAGGACAAGGAAGAAGAATTGGAGGTGGGACCAAGATGCCGAGGGGAATGCCGCTGTTTTCGATGCTGTGTTATGTGATAACGTGACCGGTAATGAAGTGGCAACGTGTAATCCGTCTATTGGTGAGAAAAGAGAGAACAATAACAGTTTACGTAGACGATACCAAGGTGCGAATAGGGCGTTTACTAAAACGGGGAGTTTGGTGTTGAGTGGAGATGAGTATGGGGAAGGGGTTGGATGGAGATTGAGTAGGGAGATGGAAGGGAGTGTGTTGAAGTGGAGAATAGGAGGGAAGGTTTGGTTGAGTTATTGGCCTAATGAGGTCAACACTAGTTATTGTGAGACAAGGTGTGTGGAGTGGTGTGATGAGGTTGATTTGCCTTTGATACTTGGAAAAATTAGCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

536

Amino Acids

59.91

Weight (kDa)

7.1

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015508)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15020
fragaria_vesca FvH4_2g07860
malus_domestica MD00G1109200.v1.1
prunus_persica Prupe.8G137000_v2.0.a1 Prupe.8G137000_v2.0.a1
pyrus_communis pycom05g09120
rosa_chinensis RchiOBHm_Chr6g0262281
rosa_laevigata RLG00000014440
rosa_multiflora Rmu_sc0002510.1_g000031
rosa_roxburghii Rroxscaffold_7G00207970
rosa_rugosa Rorug05G0596200
rosa_samantha Rh6AG116400 Rh6BG110600 Rh6CG108000 Rh6DG098400
rosa_wichuraiana Rw6G010110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 640
AasI GACNNNNNNGTC 2 cut(s) 173, 691
Acc36I ACCTGC 1 cut(s) 640
AccB1I GGYRCC 1 cut(s) 688
AccB7I CCANNNNNTGG 1 cut(s) 874
AccI GTMKAC 2 cut(s) 945, 1354
AccII CGCG 9 cut(s) 343, 445, 464, 473, 548, 590, 722, 761, 787
AciI CCGC 9 cut(s) 114, 341, 374, 445, 559, 590, 735, 1181, 1251
AclI AACGTT 1 cut(s) 798
AclWI GGATC 1 cut(s) 1089
AcsI RAATTY 1 cut(s) 703
AcuI CTGAAG 4 cut(s) 240, 770, 869, 1074
AcvI CACGTG 3 cut(s) 243, 336, 964
AcyI GRCGYC 1 cut(s) 689
AdeI CACNNNGTG 1 cut(s) 967
AfaI GTAC 4 cut(s) 610, 620, 719, 854
AfiI CCNNNNNNNGG 7 cut(s) 70, 104, 355, 770, 874, 1058, 1319
AflIII ACRYGT 5 cut(s) 240, 242, 621, 940, 1304
AgeI ACCGGT 1 cut(s) 1286
AgsI TTSAA 4 cut(s) 502, 527, 982, 1474
AhdI GACNNNNNGTC 1 cut(s) 13
AhlI ACTAGT 1 cut(s) 1529
AjiI CACGTC 1 cut(s) 997
AjnI CCWGG 3 cut(s) 294, 354, 429
AjuI GAANNNNNNNTTGG 2 cut(s) 888, 920
AluBI AGCT 7 cut(s) 31, 111, 140, 289, 352, 595, 874
AluI AGCT 7 cut(s) 31, 111, 140, 289, 352, 595, 874
Alw26I GTCTC 2 cut(s) 699, 1535
AlwI GGATC 1 cut(s) 1089
AlwNI CAGNNNCTG 1 cut(s) 874
Ama87I CYCGRG 2 cut(s) 404, 614
AoxI GGCC 2 cut(s) 1049, 1511
ApeKI GCWGC 3 cut(s) 108, 556, 871
ApoI RAATTY 1 cut(s) 703
AsiGI ACCGGT 1 cut(s) 1286
Asp700I GAANNNNTTC 2 cut(s) 266, 1019
AspLEI GCGC 9 cut(s) 92, 325, 464, 475, 550, 556, 691, 763, 789
AspS9I GGNCC 5 cut(s) 51, 61, 95, 1049, 1228
AsuC2I CCSGG 1 cut(s) 310
AsuHPI GGTGA 5 cut(s) 169, 857, 943, 979, 1334
AsuII TTCGAA 1 cut(s) 78
AsuNHI GCTAGC 1 cut(s) 86
AvaI CYCGRG 2 cut(s) 404, 614
AvaII GGWCC 4 cut(s) 51, 61, 95, 1228
BaeGI GKGCMC 1 cut(s) 341
BaeI ACNNNNGTAYC 2 cut(s) 1351, 1384
BanI GGYRCC 1 cut(s) 688
BauI CACGAG 1 cut(s) 1198
BbrPI CACGTG 3 cut(s) 243, 336, 964
BbsI GAAGAC 2 cut(s) 227, 246
BbvI GCAGC 3 cut(s) 120, 543, 883
BccI CCATC 3 cut(s) 134, 1431, 1450
BceAI ACGGC 6 cut(s) 121, 250, 336, 676, 702, 951
BcgI CGANNNNNNTGC 4 cut(s) 1054, 1088, 1229, 1263
BciT130I CCWGG 3 cut(s) 296, 356, 431
BciVI GTATCC 2 cut(s) 749, 1026
BclI TGATCA 1 cut(s) 570
BcnI CCSGG 1 cut(s) 310
BcoDI GTCTC 2 cut(s) 699, 1535
BcuI ACTAGT 1 cut(s) 1529
BfaI CTAG 2 cut(s) 87, 1530
BfoI RGCGCY 3 cut(s) 93, 557, 692
BfuAI ACCTGC 1 cut(s) 640
BfuI GTATCC 2 cut(s) 749, 1026
BisI GCNGC 6 cut(s) 109, 446, 557, 872, 1182, 1251
BlpI GCTNAGC 1 cut(s) 141
BlsI GCNGC 6 cut(s) 110, 447, 558, 873, 1183, 1252
Bme1390I CCNGG 4 cut(s) 296, 310, 356, 431
Bme18I GGWCC 4 cut(s) 51, 61, 95, 1228
BmeRI GACNNNNNGTC 1 cut(s) 13
BmeT110I CYCGRG 2 cut(s) 404, 614
BmgBI CACGTC 1 cut(s) 997
BmgT120I GGNCC 5 cut(s) 51, 61, 95, 1049, 1228
BmiI GGNNCC 5 cut(s) 63, 157, 516, 690, 1229
BmrFI CCNGG 4 cut(s) 296, 310, 356, 431
BmsI GCATC 2 cut(s) 1225, 1252
BmtI GCTAGC 1 cut(s) 90
BpiI GAAGAC 2 cut(s) 227, 246
BplI GAGNNNNNCTC 2 cut(s) 398, 430
BpmI CTGGAG 4 cut(s) 269, 278, 338, 896
Bpu1102I GCTNAGC 1 cut(s) 141
Bpu14I TTCGAA 1 cut(s) 78
BpuMI CCSGG 1 cut(s) 310
BsaAI YACGTR 4 cut(s) 243, 336, 964, 1352
BsaHI GRCGYC 1 cut(s) 689
BsaJI CCNNGG 4 cut(s) 613, 834, 1239, 1363
BsaWI WCCGGW 2 cut(s) 817, 1286
BsaXI ACNNNNNCTCC 6 cut(s) 95, 125, 1432, 1462, 1479, 1509
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 104, 355, 770, 874, 1058, 1319
Bse118I RCCGGY 3 cut(s) 550, 763, 1286
Bse3DI GCAATG 1 cut(s) 1191
BseBI CCWGG 3 cut(s) 296, 356, 431
BseDI CCNNGG 4 cut(s) 613, 834, 1239, 1363
BseGI GGATG 4 cut(s) 126, 780, 1197, 1442
BseLI CCNNNNNNNGG 7 cut(s) 70, 104, 355, 770, 874, 1058, 1319
BseMI GCAATG 1 cut(s) 1191
BseMII CTCAG 3 cut(s) 132, 134, 148
BseSI GKGCMC 1 cut(s) 341
BseXI GCAGC 3 cut(s) 120, 543, 883
BseYI CCCAGC 1 cut(s) 348
Bsh1236I CGCG 9 cut(s) 343, 445, 464, 473, 548, 590, 722, 761, 787
Bsh1285I CGRYCG 1 cut(s) 314
BshFI GGCC 2 cut(s) 1051, 1513
BshNI GGYRCC 1 cut(s) 688
BshTI ACCGGT 1 cut(s) 1286
BsiEI CGRYCG 1 cut(s) 314
BsiHKCI CYCGRG 2 cut(s) 404, 614
BsiSI CCGG 7 cut(s) 93, 153, 310, 551, 764, 818, 1287
BsiWI CGTACG 1 cut(s) 717
BslFI GGGAC 2 cut(s) 28, 1241
BslI CCNNNNNNNGG 7 cut(s) 70, 104, 355, 770, 874, 1058, 1319
BsmAI GTCTC 2 cut(s) 699, 1535
BsmBI CGTCTC 1 cut(s) 699
BsmFI GGGAC 2 cut(s) 28, 1241
BsmI GAATGC 1 cut(s) 1252
BsnI GGCC 2 cut(s) 1051, 1513
BsoBI CYCGRG 2 cut(s) 404, 614
Bsp119I TTCGAA 1 cut(s) 78
Bsp1286I GDGCHC 1 cut(s) 341
Bsp143I GATC 3 cut(s) 300, 570, 1094
Bsp1720I GCTNAGC 1 cut(s) 141
BspACI CCGC 9 cut(s) 114, 341, 374, 445, 559, 590, 735, 1181, 1251
BspANI GGCC 2 cut(s) 1051, 1513
BspCNI CTCAG 3 cut(s) 133, 133, 147
BspFNI CGCG 9 cut(s) 343, 445, 464, 473, 548, 590, 722, 761, 787
BspLI GGNNCC 5 cut(s) 63, 157, 516, 690, 1229
BspMI ACCTGC 1 cut(s) 640
BspOI GCTAGC 1 cut(s) 90
BspPI GGATC 1 cut(s) 1089
BspQI GCTCTTC 1 cut(s) 455
BspT104I TTCGAA 1 cut(s) 78
BspT107I GGYRCC 1 cut(s) 688
BsrDI GCAATG 1 cut(s) 1191
BsrFI RCCGGY 3 cut(s) 550, 763, 1286
BssAI RCCGGY 3 cut(s) 550, 763, 1286
BssECI CCNNGG 4 cut(s) 613, 834, 1239, 1363
BssMI GATC 3 cut(s) 300, 570, 1094
BssNI GRCGYC 1 cut(s) 689
BssSI CACGAG 1 cut(s) 1198
BssT1I CCWWGG 2 cut(s) 834, 1363
Bst2BI CACGAG 1 cut(s) 1198
Bst2UI CCWGG 3 cut(s) 296, 356, 431
Bst4CI ACNGT 2 cut(s) 577, 1346
Bst6I CTCTTC 2 cut(s) 455, 1136
BstACI GRCGYC 1 cut(s) 689
BstBAI YACGTR 4 cut(s) 243, 336, 964, 1352
BstBI TTCGAA 1 cut(s) 78
BstC8I GCNNGC 8 cut(s) 29, 88, 194, 341, 513, 546, 552, 733
BstDEI CTNAG 4 cut(s) 120, 134, 141, 540
BstEII GGTNACC 1 cut(s) 175
BstF5I GGATG 4 cut(s) 126, 780, 1197, 1442
BstFNI CGCG 9 cut(s) 343, 445, 464, 473, 548, 590, 722, 761, 787
BstH2I RGCGCY 3 cut(s) 93, 557, 692
BstHHI GCGC 9 cut(s) 92, 325, 464, 475, 550, 556, 691, 763, 789
BstKTI GATC 3 cut(s) 303, 573, 1097
BstMAI GTCTC 2 cut(s) 699, 1535
BstMBI GATC 3 cut(s) 300, 570, 1094
BstMCI CGRYCG 1 cut(s) 314
BstMWI GCNNNNNNNGC 8 cut(s) 198, 322, 349, 454, 470, 556, 728, 1376
BstNI CCWGG 3 cut(s) 296, 356, 431
BstNSI RCATGY 3 cut(s) 625, 643, 944
BstPI GGTNACC 1 cut(s) 175
BstSCI CCNGG 4 cut(s) 294, 308, 354, 429
BstSLI GKGCMC 1 cut(s) 341
BstSNI TACGTA 1 cut(s) 1352
BstUI CGCG 9 cut(s) 343, 445, 464, 473, 548, 590, 722, 761, 787
BstV1I GCAGC 3 cut(s) 120, 543, 883
BstV2I GAAGAC 2 cut(s) 227, 246
BsuI GTATCC 2 cut(s) 749, 1026
BsuRI GGCC 2 cut(s) 1051, 1513
BtrI CACGTC 1 cut(s) 997
BtsCI GGATG 4 cut(s) 126, 780, 1197, 1442
BveI ACCTGC 1 cut(s) 640
Cac8I GCNNGC 8 cut(s) 29, 88, 194, 341, 513, 546, 552, 733
CaiI CAGNNNCTG 1 cut(s) 874
CfoI GCGC 9 cut(s) 92, 325, 464, 475, 550, 556, 691, 763, 789
Cfr10I RCCGGY 3 cut(s) 550, 763, 1286
Cfr13I GGNCC 5 cut(s) 51, 61, 95, 1049, 1228
CpoI CGGWCCG 1 cut(s) 95
CseI GACGC 3 cut(s) 479, 596, 679
CsiI ACCWGGT 1 cut(s) 429
Csp6I GTAC 4 cut(s) 609, 619, 718, 853
CspAI ACCGGT 1 cut(s) 1286
CspCI CAANNNNNGTGG 2 cut(s) 1533, 1568
CspI CGGWCCG 1 cut(s) 95
CviAII CATG 8 cut(s) 18, 197, 388, 604, 622, 640, 941, 1076
CviQI GTAC 4 cut(s) 609, 619, 718, 853
DdeI CTNAG 4 cut(s) 120, 134, 141, 540
DinI GGCGCC 1 cut(s) 690
DpnI GATC 3 cut(s) 302, 572, 1096
DpnII GATC 3 cut(s) 300, 570, 1094
DraIII CACNNNGTG 1 cut(s) 967
DrdI GACNNNNNNGTC 2 cut(s) 173, 691
DriI GACNNNNNGTC 1 cut(s) 13
DseDI GACNNNNNNGTC 2 cut(s) 173, 691
Eam1104I CTCTTC 2 cut(s) 455, 1136
Eam1105I GACNNNNNGTC 1 cut(s) 13
EarI CTCTTC 2 cut(s) 455, 1136
Eco105I TACGTA 1 cut(s) 1352
Eco130I CCWWGG 2 cut(s) 834, 1363
Eco47I GGWCC 4 cut(s) 51, 61, 95, 1228
Eco57I CTGAAG 4 cut(s) 240, 770, 869, 1074
Eco72I CACGTG 3 cut(s) 243, 336, 964
Eco88I CYCGRG 2 cut(s) 404, 614
Eco91I GGTNACC 1 cut(s) 175
EcoO65I GGTNACC 1 cut(s) 175
EcoRII CCWGG 3 cut(s) 294, 354, 429
EcoT14I CCWWGG 2 cut(s) 834, 1363
EgeI GGCGCC 1 cut(s) 690
EheI GGCGCC 1 cut(s) 690
ErhI CCWWGG 2 cut(s) 834, 1363
Esp3I CGTCTC 1 cut(s) 699
FaeI CATG 8 cut(s) 21, 200, 391, 607, 625, 643, 944, 1079
FaqI GGGAC 2 cut(s) 28, 1241
FatI CATG 8 cut(s) 17, 196, 387, 603, 621, 639, 940, 1075
FauI CCCGC 3 cut(s) 348, 381, 728
FauNDI CATATG 1 cut(s) 1604
FbaI TGATCA 1 cut(s) 570
FblI GTMKAC 2 cut(s) 945, 1354
Fnu4HI GCNGC 6 cut(s) 109, 446, 557, 872, 1182, 1251
FokI GGATG 4 cut(s) 113, 787, 1204, 1449
Fsp4HI GCNGC 6 cut(s) 109, 446, 557, 872, 1182, 1251
FspBI CTAG 2 cut(s) 87, 1530
GlaI GCGC 9 cut(s) 91, 324, 463, 474, 549, 555, 690, 762, 788
GluI GCNGC 6 cut(s) 109, 446, 557, 872, 1182, 1251
GsaI CCCAGC 1 cut(s) 352
GsuI CTGGAG 4 cut(s) 269, 278, 338, 896
HaeII RGCGCY 3 cut(s) 93, 557, 692
HaeIII GGCC 2 cut(s) 1051, 1513
HapII CCGG 7 cut(s) 93, 153, 310, 551, 764, 818, 1287
HgaI GACGC 3 cut(s) 479, 596, 679
HhaI GCGC 9 cut(s) 92, 325, 464, 475, 550, 556, 691, 763, 789
Hin1I GRCGYC 1 cut(s) 689
Hin1II CATG 8 cut(s) 21, 200, 391, 607, 625, 643, 944, 1079
Hin6I GCGC 9 cut(s) 90, 323, 462, 473, 548, 554, 689, 761, 787
HinP1I GCGC 9 cut(s) 90, 323, 462, 473, 548, 554, 689, 761, 787
HincII GTYRAC 3 cut(s) 796, 946, 1525
HindII GTYRAC 3 cut(s) 796, 946, 1525
HpaII CCGG 7 cut(s) 93, 153, 310, 551, 764, 818, 1287
HphI GGTGA 5 cut(s) 169, 857, 943, 979, 1334
Hpy188I TCNGA 9 cut(s) 61, 137, 207, 238, 259, 581, 702, 804, 1170
Hpy188III TCNNGA 2 cut(s) 404, 568
Hpy99I CGWCG 2 cut(s) 322, 1030
HpyAV CCTTC 7 cut(s) 190, 430, 521, 745, 1421, 1454, 1486
HpyCH4III ACNGT 2 cut(s) 577, 1346
HpyCH4V TGCA 4 cut(s) 196, 639, 1075, 1129
HpyF10VI GCNNNNNNNGC 8 cut(s) 198, 322, 349, 454, 470, 556, 728, 1376
HpyF3I CTNAG 4 cut(s) 120, 134, 141, 540
Hsp92I GRCGYC 1 cut(s) 689
Hsp92II CATG 8 cut(s) 21, 200, 391, 607, 625, 643, 944, 1079
HspAI GCGC 9 cut(s) 90, 323, 462, 473, 548, 554, 689, 761, 787
KasI GGCGCC 1 cut(s) 688
KroI GCCGGC 1 cut(s) 550
KroNI GCCGGC 1 cut(s) 552
Ksp22I TGATCA 1 cut(s) 570
Kzo9I GATC 3 cut(s) 300, 570, 1094
LguI GCTCTTC 1 cut(s) 455
LmnI GCTCC 5 cut(s) 116, 161, 357, 520, 592
Lsp1109I GCAGC 3 cut(s) 120, 543, 883
LweI GCATC 2 cut(s) 1225, 1252
MabI ACCWGGT 1 cut(s) 429
MaeI CTAG 2 cut(s) 87, 1530
MaeIII GTNAC 6 cut(s) 101, 175, 467, 931, 967, 1282
MalI GATC 3 cut(s) 302, 572, 1096
MboI GATC 3 cut(s) 300, 570, 1094
MboII GAAGA 7 cut(s) 232, 246, 415, 442, 1153, 1222, 1225
MhlI GDGCHC 1 cut(s) 341
MluCI AATT 4 cut(s) 703, 949, 1216, 1596
Mly113I GGCGCC 1 cut(s) 689
MlyI GAGTC 6 cut(s) 65, 109, 386, 416, 833, 964
MmeI TCCRAC 6 cut(s) 39, 154, 183, 559, 886, 1414
MreI CGCCGGCG 1 cut(s) 550
MroNI GCCGGC 1 cut(s) 550
MroXI GAANNNNTTC 2 cut(s) 266, 1019
MseI TTAA 1 cut(s) 644
MspA1I CMGCKG 2 cut(s) 874, 1253
MspI CCGG 7 cut(s) 93, 153, 310, 551, 764, 818, 1287
MspR9I CCNGG 4 cut(s) 296, 310, 356, 431
Mva1269I GAATGC 1 cut(s) 1252
MvaI CCWGG 3 cut(s) 296, 356, 431
MvnI CGCG 9 cut(s) 343, 445, 464, 473, 548, 590, 722, 761, 787
MwoI GCNNNNNNNGC 8 cut(s) 198, 322, 349, 454, 470, 556, 728, 1376
NaeI GCCGGC 1 cut(s) 552
NarI GGCGCC 1 cut(s) 689
NciI CCSGG 1 cut(s) 310
NdeI CATATG 1 cut(s) 1604
NdeII GATC 3 cut(s) 300, 570, 1094
NgoMIV GCCGGC 1 cut(s) 550
NheI GCTAGC 1 cut(s) 86
NlaIII CATG 8 cut(s) 21, 200, 391, 607, 625, 643, 944, 1079
NlaIV GGNNCC 5 cut(s) 63, 157, 516, 690, 1229
NmeAIII GCCGAG 2 cut(s) 501, 1264
NmuCI GTSAC 6 cut(s) 101, 175, 467, 931, 967, 1282
NspI RCATGY 3 cut(s) 625, 643, 944
NspV TTCGAA 1 cut(s) 78
PaqCI CACCTGC 1 cut(s) 640
PciI ACATGT 2 cut(s) 621, 940
PciSI GCTCTTC 1 cut(s) 455
PcsI WCGNNNNNNNCGW 2 cut(s) 65, 1310
PctI GAATGC 1 cut(s) 1252
PdiI GCCGGC 1 cut(s) 552
PdmI GAANNNNTTC 2 cut(s) 266, 1019
PfeI GAWTC 4 cut(s) 711, 808, 909, 978
Pfl23II CGTACG 1 cut(s) 717
PflFI GACNNNGTC 2 cut(s) 55, 99
PflMI CCANNNNNTGG 1 cut(s) 874
PfoI TCCNGGA 1 cut(s) 294
PinAI ACCGGT 1 cut(s) 1286
PkrI GCNGC 6 cut(s) 110, 447, 558, 873, 1183, 1252
PleI GAGTC 6 cut(s) 64, 108, 386, 415, 833, 964
PluTI GGCGCC 1 cut(s) 692
PmaCI CACGTG 3 cut(s) 243, 336, 964
PmlI CACGTG 3 cut(s) 243, 336, 964
PpsI GAGTC 6 cut(s) 64, 108, 386, 415, 833, 964
Ppu21I YACGTR 4 cut(s) 243, 336, 964, 1352
PscI ACATGT 2 cut(s) 621, 940
Psp1406I AACGTT 1 cut(s) 798
Psp6I CCWGG 3 cut(s) 294, 354, 429
PspCI CACGTG 3 cut(s) 243, 336, 964
PspEI GGTNACC 1 cut(s) 175
PspFI CCCAGC 1 cut(s) 348
PspGI CCWGG 3 cut(s) 294, 354, 429
PspLI CGTACG 1 cut(s) 717
PspN4I GGNNCC 5 cut(s) 63, 157, 516, 690, 1229
PspPI GGNCC 5 cut(s) 51, 61, 95, 1049, 1228
PstNI CAGNNNCTG 1 cut(s) 874
PsyI GACNNNGTC 2 cut(s) 55, 99
PvuII CAGCTG 1 cut(s) 874
RsaI GTAC 4 cut(s) 610, 620, 719, 854
RsaNI GTAC 4 cut(s) 609, 619, 718, 853
Rsr2I CGGWCCG 1 cut(s) 95
RsrII CGGWCCG 1 cut(s) 95
SalI GTCGAC 1 cut(s) 944
SapI GCTCTTC 1 cut(s) 455
SaqAI TTAA 1 cut(s) 644
SatI GCNGC 6 cut(s) 109, 446, 557, 872, 1182, 1251
Sau3AI GATC 3 cut(s) 300, 570, 1094
Sau96I GGNCC 5 cut(s) 51, 61, 95, 1049, 1228
SchI GAGTC 6 cut(s) 65, 109, 386, 416, 833, 964
ScrFI CCNGG 4 cut(s) 296, 310, 356, 431
SduI GDGCHC 1 cut(s) 341
SexAI ACCWGGT 1 cut(s) 429
SfaNI GCATC 2 cut(s) 1225, 1252
SfoI GGCGCC 1 cut(s) 690
SfuI TTCGAA 1 cut(s) 78
SgrAI CRCCGGYG 2 cut(s) 550, 763
SinI GGWCC 4 cut(s) 51, 61, 95, 1228
SnaBI TACGTA 1 cut(s) 1352
SpeI ACTAGT 1 cut(s) 1529
Sse9I AATT 4 cut(s) 703, 949, 1216, 1596
SsiI CCGC 9 cut(s) 114, 341, 374, 445, 559, 590, 735, 1181, 1251
SspDI GGCGCC 1 cut(s) 688
SspI AATATT 2 cut(s) 523, 899
SspMI CTAG 2 cut(s) 87, 1530
StyD4I CCNGG 4 cut(s) 294, 308, 354, 429
StyI CCWWGG 2 cut(s) 834, 1363
TaaI ACNGT 2 cut(s) 577, 1346
TaqI TCGA 6 cut(s) 78, 165, 426, 945, 1028, 1260
TaqII GACCGA 3 cut(s) 68, 112, 781
TasI AATT 4 cut(s) 703, 949, 1216, 1596
TauI GCSGC 3 cut(s) 448, 1184, 1253
TfiI GAWTC 4 cut(s) 711, 808, 909, 978
Tru1I TTAA 1 cut(s) 644
Tru9I TTAA 1 cut(s) 644
TseFI GTSAC 6 cut(s) 101, 175, 467, 931, 967, 1282
TseI GCWGC 3 cut(s) 108, 556, 871
Tsp45I GTSAC 6 cut(s) 101, 175, 467, 931, 967, 1282
TspDTI ATGAA 4 cut(s) 427, 592, 1154, 1308
TspGWI ACGGA 3 cut(s) 892, 933, 1302
Tth111I GACNNNGTC 2 cut(s) 55, 99
Van91I CCANNNNNTGG 1 cut(s) 874
VpaK11BI GGWCC 4 cut(s) 51, 61, 95, 1228
XapI RAATTY 1 cut(s) 703
XceI RCATGY 3 cut(s) 625, 643, 944
XmiI GTMKAC 2 cut(s) 945, 1354
XmnI GAANNNNTTC 2 cut(s) 266, 1019
XspI CTAG 2 cut(s) 87, 1530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.