Rroxscaffold_7G00207970

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0015508
Physical Location & Seq
Forward (+)
57942045 .. 57945612
3568 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00207970.1

Sequence Viewer

Length: 1599 bp
ATGCTTGATATTTGGTCATGGATTTGCGAGCTACCCAACTTGTCCCAATGGACCGAGTCGGACCCCTCACTCGTTTTCGAGCTCGCTAGCTCGGGACCGAGTCACGGCGACTCCTCAACTCGGTCCATCCAACTCAGGGCTGAGAGAAGTTCAGGCTCCAACATTGACACTCTCGTCACCTTCTCGGTTTGCTTGCATGGCTTTCAGAACCTGTCCAAGAAAACCCTCTGGGTTTCTGACACGTGTTCTTTGTCTTCAGACAAGCCGTTCCTCCCTCTGTTACTCCAGCTTCTCCAGGAGACCATATCCCGTTCGCCGACGGCGCACGATAGCACATGCCCGCGTTCACAGCTAAAAGCCCTCAAACCCGACCCGTCCTTCTCCACCTTCTTCGACCTGGTTTTCATTACGCGCCTCTTCTGGCTCTGCGCTTGTGACGCGCCGAGTGAAGTCGGCTCTCTCTACTTCAAGTCCTTGCTGGCTCCCAACCTTGAAGGTTTGATGTCCAAGCACGCGCCGGCTCTTCGAACGTTCTTTATCACAGTCGGAGTGGACGCGGAGCTGTGCTTCATGCGCACCCTCGGGTACATGTTAGCAAAATGGTGCATGTTAAGGCAGGTGGGCGTAGGTTTACAGACGCTAACAGCTCTGACGGCGCCGTCTCAGCAAAACCTAGGATTCTCTTTACGCGAACGAGGCTTGCGGGTTTTGGGTGCTGAAGGGGTACGCGCCGGTGCTTGGGATGAGAACCACGCGCTCCGCCAACGTTCAGACGACTCAGTTTCCGATTATGGAAACAACCAAGGACTCGGTGCTGAACTCGAGGCAGTTGTTCAGGTGGAATATTCAGTTGGATTCTACGACGGGTTTATTCAGGTGACTGCACGCATCGACAACCTGCGCTTCCACGTGGCGAGTCTTGGATTCAACAAAAACGATGACGTGGACTACGCCGAGGAGAGGTATTTTCCGTCGAGAATCCGGGTTTGGGTTGGTCCTGAAGTTGGGGCGAACTACGTGCATGGGTTGAGTTTGGGTCGATCCACGGATAACGGGGAGAAAGAAGTGAAAATGCAAAAGATTATGAAGAGTAGTTTCGGTAAGTCAAAGAATTCAAGAGTGAAAGCTACGATGAGAATGTCGACGAGGACGAGGAAGAAGAACTGGAGGTGGGATCAGGATGCGGAGGGAAATGCTGCTGTGTTTGATGCAGTGTTATGTGATAACGTGACGGGTCATGAAGTGGCCACGAGCAATCCGTCTATTGGTGGCAGAAGCGAGAACAATAATGGTTTACGTAGACGATATGAAGGTGCGAATAGGGCGTTTACGAAAACGGGGAGTTTGGTGTTGGGTGGAGATGAGTATGGGGATGGAGTTGGATGGAGATTGAGTAAGGAGATGGAAGGGGAGTGTGTTGAAGTGGAGAATAGGAGGGGAAGGAAGCTTCTACTGGTGCTGAGGAATCCAGAGGAATTTTTTGGGACCAGCAGGCGTTGGGCTTGGAGAACTAGGTGGCTTGAAATCCTCATAACTGTCAAAACCATGTCAGCTCAATCTGAATTCATCCCATATCTATCATGTCACAGGAAAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

532

Amino Acids

59.59

Weight (kDa)

8.4

Isoelectric Point (pI)

50.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015508)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15020
fragaria_vesca FvH4_2g07860
malus_domestica MD00G1109200.v1.1
prunus_persica Prupe.8G137000_v2.0.a1 Prupe.8G137000_v2.0.a1
pyrus_communis pycom05g09120
rosa_chinensis RchiOBHm_Chr6g0262281
rosa_laevigata RLG00000014440
rosa_multiflora Rmu_sc0002510.1_g000031
rosa_roxburghii Rroxscaffold_7G00207970
rosa_rugosa Rorug05G0596200
rosa_samantha Rh6AG116400 Rh6BG110600 Rh6CG108000 Rh6DG098400
rosa_wichuraiana Rw6G010110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 607
AasI GACNNNNNNGTC 2 cut(s) 173, 658
Acc16I TGCGCA 1 cut(s) 575
Acc36I ACCTGC 2 cut(s) 607, 906
AccB1I GGYRCC 1 cut(s) 655
AccI GTMKAC 2 cut(s) 1142, 1300
AccII CGCG 8 cut(s) 343, 412, 440, 515, 557, 690, 729, 755
AciI CCGC 5 cut(s) 341, 557, 703, 760, 1184
AclI AACGTT 2 cut(s) 530, 766
AclWI GGATC 2 cut(s) 1035, 1182
AcoI YGGCCR 1 cut(s) 1245
AcsI RAATTY 3 cut(s) 1111, 1475, 1562
AcuI CTGAAG 3 cut(s) 240, 738, 1020
AcvI CACGTG 2 cut(s) 243, 910
AcyI GRCGYC 1 cut(s) 656
AfaI GTAC 2 cut(s) 587, 726
AfiI CCNNNNNNNGG 8 cut(s) 104, 120, 136, 738, 960, 988, 1004, 1265
AflIII ACRYGT 3 cut(s) 240, 242, 588
AgsI TTSAA 6 cut(s) 469, 494, 928, 1116, 1421, 1523
AjiI CACGTC 1 cut(s) 943
AjnI CCWGG 2 cut(s) 294, 396
AjuI GAANNNNNNNTTGG 4 cut(s) 834, 866, 970, 1002
Alw21I GWGCWC 1 cut(s) 84
Alw26I GTCTC 2 cut(s) 293, 666
AlwI GGATC 2 cut(s) 1035, 1182
AlwNI CAGNNNCTG 1 cut(s) 211
Ama87I CYCGRG 3 cut(s) 91, 581, 821
AoxI GGCC 1 cut(s) 1245
ApeKI GCWGC 1 cut(s) 1196
ApoI RAATTY 3 cut(s) 1111, 1475, 1562
AspA2I CCTAGG 1 cut(s) 673
AspS9I GGNCC 6 cut(s) 51, 61, 95, 123, 995, 1485
AsuC2I CCSGG 1 cut(s) 983
AsuHPI GGTGA 2 cut(s) 169, 889
AsuII TTCGAA 1 cut(s) 526
AsuNHI GCTAGC 1 cut(s) 86
AvaI CYCGRG 3 cut(s) 91, 581, 821
AvaII GGWCC 6 cut(s) 51, 61, 95, 123, 995, 1485
AvrII CCTAGG 1 cut(s) 673
BalI TGGCCA 1 cut(s) 1247
BanI GGYRCC 1 cut(s) 655
BanII GRGCYC 1 cut(s) 84
BauI CACGAG 1 cut(s) 1249
BbrPI CACGTG 2 cut(s) 243, 910
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 84
BbvCI CCTCAGC 1 cut(s) 1460
BbvI GCAGC 1 cut(s) 1183
BccI CCATC 4 cut(s) 134, 1367, 1377, 1396
BceAI ACGGC 5 cut(s) 121, 250, 336, 643, 669
BcgI CGANNNNNNTGC 2 cut(s) 1000, 1034
BciT130I CCWGG 2 cut(s) 296, 398
BcnI CCSGG 1 cut(s) 983
BcoDI GTCTC 2 cut(s) 293, 666
BfaI CTAG 3 cut(s) 87, 674, 1512
BfoI RGCGCY 1 cut(s) 659
BfuAI ACCTGC 2 cut(s) 607, 906
BisI GCNGC 1 cut(s) 1197
BlnI CCTAGG 1 cut(s) 673
BlsI GCNGC 1 cut(s) 1198
Bme1390I CCNGG 3 cut(s) 296, 398, 983
Bme18I GGWCC 6 cut(s) 51, 61, 95, 123, 995, 1485
BmeT110I CYCGRG 3 cut(s) 91, 581, 821
BmgBI CACGTC 1 cut(s) 943
BmgT120I GGNCC 6 cut(s) 51, 61, 95, 123, 995, 1485
BmiI GGNNCC 6 cut(s) 63, 96, 157, 483, 657, 1486
BmrFI CCNGG 3 cut(s) 296, 398, 983
BmsI GCATC 3 cut(s) 897, 1171, 1198
BmtI GCTAGC 1 cut(s) 90
BpiI GAAGAC 1 cut(s) 246
BpmI CTGGAG 3 cut(s) 269, 278, 1186
Bpu10I CCTNAGC 1 cut(s) 1460
Bpu14I TTCGAA 1 cut(s) 526
BpuMI CCSGG 1 cut(s) 983
BsaAI YACGTR 4 cut(s) 243, 910, 1018, 1298
BsaHI GRCGYC 1 cut(s) 656
BsaI GGTCTC 1 cut(s) 293
BsaJI CCNNGG 5 cut(s) 580, 673, 802, 954, 1044
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 1378, 1408
Bsc4I CCNNNNNNNGG 8 cut(s) 104, 120, 136, 738, 960, 988, 1004, 1265
Bse118I RCCGGY 2 cut(s) 517, 731
Bse1I ACTGG 2 cut(s) 1169, 1458
BseBI CCWGG 2 cut(s) 296, 398
BseDI CCNNGG 5 cut(s) 580, 673, 802, 954, 1044
BseGI GGATG 6 cut(s) 126, 748, 1186, 1378, 1388, 1566
BseLI CCNNNNNNNGG 8 cut(s) 104, 120, 136, 738, 960, 988, 1004, 1265
BseMII CTCAG 5 cut(s) 132, 148, 677, 792, 1451
BseNI ACTGG 2 cut(s) 1169, 1458
BseRI GAGGAG 2 cut(s) 103, 971
BseXI GCAGC 1 cut(s) 1183
BsgI GTGCAG 1 cut(s) 867
Bsh1236I CGCG 8 cut(s) 343, 412, 440, 515, 557, 690, 729, 755
BshFI GGCC 1 cut(s) 1247
BshNI GGYRCC 1 cut(s) 655
BsiHKAI GWGCWC 1 cut(s) 84
BsiHKCI CYCGRG 3 cut(s) 91, 581, 821
BsiSI CCGG 3 cut(s) 518, 732, 982
BslFI GGGAC 3 cut(s) 28, 108, 1498
BslI CCNNNNNNNGG 8 cut(s) 104, 120, 136, 738, 960, 988, 1004, 1265
BsmAI GTCTC 2 cut(s) 293, 666
BsmBI CGTCTC 1 cut(s) 666
BsmFI GGGAC 3 cut(s) 28, 108, 1498
BsnI GGCC 1 cut(s) 1247
Bso31I GGTCTC 1 cut(s) 293
BsoBI CYCGRG 3 cut(s) 91, 581, 821
Bsp119I TTCGAA 1 cut(s) 526
Bsp1286I GDGCHC 1 cut(s) 84
Bsp143I GATC 2 cut(s) 1040, 1174
BspACI CCGC 5 cut(s) 341, 557, 703, 760, 1184
BspANI GGCC 1 cut(s) 1247
BspCNI CTCAG 5 cut(s) 133, 147, 676, 791, 1452
BspFNI CGCG 8 cut(s) 343, 412, 440, 515, 557, 690, 729, 755
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 6 cut(s) 63, 96, 157, 483, 657, 1486
BspMI ACCTGC 2 cut(s) 607, 906
BspOI GCTAGC 1 cut(s) 90
BspPI GGATC 2 cut(s) 1035, 1182
BspQI GCTCTTC 1 cut(s) 528
BspT104I TTCGAA 1 cut(s) 526
BspT107I GGYRCC 1 cut(s) 655
BspTNI GGTCTC 1 cut(s) 293
BsrFI RCCGGY 2 cut(s) 517, 731
BsrI ACTGG 2 cut(s) 1169, 1458
BssAI RCCGGY 2 cut(s) 517, 731
BssECI CCNNGG 5 cut(s) 580, 673, 802, 954, 1044
BssMI GATC 2 cut(s) 1040, 1174
BssNI GRCGYC 1 cut(s) 656
BssSI CACGAG 1 cut(s) 1249
BssT1I CCWWGG 2 cut(s) 673, 802
Bst2BI CACGAG 1 cut(s) 1249
Bst2UI CCWGG 2 cut(s) 296, 398
Bst4CI ACNGT 2 cut(s) 544, 1537
Bst6I CTCTTC 3 cut(s) 422, 528, 1082
BstACI GRCGYC 1 cut(s) 656
BstBAI YACGTR 4 cut(s) 243, 910, 1018, 1298
BstBI TTCGAA 1 cut(s) 526
BstDEI CTNAG 6 cut(s) 134, 141, 663, 778, 1460, 1596
BstDSI CCRYGG 1 cut(s) 1044
BstF5I GGATG 6 cut(s) 126, 748, 1186, 1378, 1388, 1566
BstFNI CGCG 8 cut(s) 343, 412, 440, 515, 557, 690, 729, 755
BstH2I RGCGCY 1 cut(s) 659
BstKTI GATC 2 cut(s) 1043, 1177
BstMAI GTCTC 2 cut(s) 293, 666
BstMBI GATC 2 cut(s) 1040, 1174
BstMWI GCNNNNNNNGC 9 cut(s) 198, 322, 349, 437, 573, 653, 664, 696, 1322
BstNI CCWGG 2 cut(s) 296, 398
BstNSI RCATGY 3 cut(s) 339, 592, 610
BstSCI CCNGG 3 cut(s) 294, 396, 981
BstSNI TACGTA 1 cut(s) 1298
BstUI CGCG 8 cut(s) 343, 412, 440, 515, 557, 690, 729, 755
BstV1I GCAGC 1 cut(s) 1183
BstV2I GAAGAC 1 cut(s) 246
BsuRI GGCC 1 cut(s) 1247
BtgI CCRYGG 1 cut(s) 1044
BtrI CACGTC 1 cut(s) 943
BtsCI GGATG 6 cut(s) 126, 748, 1186, 1378, 1388, 1566
BtsI GCAGTG 1 cut(s) 1218
BtsIMutI CAGTG 1 cut(s) 1218
BveI ACCTGC 2 cut(s) 607, 906
CaiI CAGNNNCTG 1 cut(s) 211
CciI TCATGA 1 cut(s) 1237
Cfr10I RCCGGY 2 cut(s) 517, 731
Cfr13I GGNCC 6 cut(s) 51, 61, 95, 123, 995, 1485
CseI GACGC 3 cut(s) 446, 563, 646
CsiI ACCWGGT 1 cut(s) 396
Csp6I GTAC 2 cut(s) 586, 725
CviQI GTAC 2 cut(s) 586, 725
DdeI CTNAG 6 cut(s) 134, 141, 663, 778, 1460, 1596
DinI GGCGCC 1 cut(s) 657
DpnI GATC 2 cut(s) 1042, 1176
DpnII GATC 2 cut(s) 1040, 1174
DrdI GACNNNNNNGTC 2 cut(s) 173, 658
DseDI GACNNNNNNGTC 2 cut(s) 173, 658
EaeI YGGCCR 1 cut(s) 1245
Eam1104I CTCTTC 3 cut(s) 422, 528, 1082
EarI CTCTTC 3 cut(s) 422, 528, 1082
EciI GGCGGA 1 cut(s) 749
Ecl136II GAGCTC 1 cut(s) 82
Eco105I TACGTA 1 cut(s) 1298
Eco130I CCWWGG 2 cut(s) 673, 802
Eco24I GRGCYC 1 cut(s) 84
Eco31I GGTCTC 1 cut(s) 293
Eco47I GGWCC 6 cut(s) 51, 61, 95, 123, 995, 1485
Eco53kI GAGCTC 1 cut(s) 82
Eco57I CTGAAG 3 cut(s) 240, 738, 1020
Eco72I CACGTG 2 cut(s) 243, 910
Eco88I CYCGRG 3 cut(s) 91, 581, 821
EcoICRI GAGCTC 1 cut(s) 82
EcoRI GAATTC 2 cut(s) 1111, 1562
EcoRII CCWGG 2 cut(s) 294, 396
EcoT14I CCWWGG 2 cut(s) 673, 802
EcoT38I GRGCYC 1 cut(s) 84
EgeI GGCGCC 1 cut(s) 657
EheI GGCGCC 1 cut(s) 657
ErhI CCWWGG 2 cut(s) 673, 802
Esp3I CGTCTC 1 cut(s) 666
FaqI GGGAC 3 cut(s) 28, 108, 1498
FauI CCCGC 2 cut(s) 348, 696
FblI GTMKAC 2 cut(s) 1142, 1300
Fnu4HI GCNGC 1 cut(s) 1197
FokI GGATG 6 cut(s) 113, 755, 1193, 1385, 1395, 1553
FriOI GRGCYC 1 cut(s) 84
Fsp4HI GCNGC 1 cut(s) 1197
FspAI RTGCGCAY 1 cut(s) 575
FspBI CTAG 3 cut(s) 87, 674, 1512
FspI TGCGCA 1 cut(s) 575
GluI GCNGC 1 cut(s) 1197
GsuI CTGGAG 3 cut(s) 269, 278, 1186
HaeII RGCGCY 1 cut(s) 659
HaeIII GGCC 1 cut(s) 1247
HapII CCGG 3 cut(s) 518, 732, 982
HgaI GACGC 3 cut(s) 446, 563, 646
Hin1I GRCGYC 1 cut(s) 656
HincII GTYRAC 1 cut(s) 1143
HindII GTYRAC 1 cut(s) 1143
HindIII AAGCTT 2 cut(s) 1445, 1593
HpaII CCGG 3 cut(s) 518, 732, 982
HphI GGTGA 2 cut(s) 169, 889
Hpy166II GTNNAC 8 cut(s) 347, 553, 632, 946, 1143, 1295, 1301, 1329
Hpy188I TCNGA 9 cut(s) 61, 207, 238, 259, 548, 651, 772, 787, 1561
Hpy188III TCNNGA 7 cut(s) 93, 975, 998, 1116, 1178, 1238, 1469
Hpy8I GTNNAC 8 cut(s) 347, 553, 632, 946, 1143, 1295, 1301, 1329
Hpy99I CGWCG 4 cut(s) 322, 866, 976, 1147
HpyAV CCTTC 8 cut(s) 190, 388, 397, 488, 713, 1304, 1400, 1434
HpyCH4III ACNGT 2 cut(s) 544, 1537
HpyCH4IV ACGT 8 cut(s) 242, 530, 766, 909, 942, 1017, 1227, 1297
HpyCH4V TGCA 6 cut(s) 196, 606, 884, 1021, 1075, 1211
HpyF10VI GCNNNNNNNGC 9 cut(s) 198, 322, 349, 437, 573, 653, 664, 696, 1322
HpyF3I CTNAG 6 cut(s) 134, 141, 663, 778, 1460, 1596
HpySE526I ACGT 8 cut(s) 242, 530, 766, 909, 942, 1017, 1227, 1297
Hsp92I GRCGYC 1 cut(s) 656
KasI GGCGCC 1 cut(s) 655
KroI GCCGGC 1 cut(s) 517
KroNI GCCGGC 1 cut(s) 519
Kzo9I GATC 2 cut(s) 1040, 1174
LguI GCTCTTC 1 cut(s) 528
LmnI GCTCC 4 cut(s) 161, 487, 559, 762
Lsp1109I GCAGC 1 cut(s) 1183
LweI GCATC 3 cut(s) 897, 1171, 1198
MabI ACCWGGT 1 cut(s) 396
MaeI CTAG 3 cut(s) 87, 674, 1512
MaeII ACGT 8 cut(s) 242, 530, 766, 909, 942, 1017, 1227, 1297
MaeIII GTNAC 7 cut(s) 101, 175, 279, 434, 877, 1228, 1583
MalI GATC 2 cut(s) 1042, 1176
MboI GATC 2 cut(s) 1040, 1174
MboII GAAGA 7 cut(s) 246, 382, 409, 515, 1099, 1168, 1171
MhlI GDGCHC 1 cut(s) 84
MlsI TGGCCA 1 cut(s) 1247
MluCI AATT 3 cut(s) 1111, 1475, 1562
MluNI TGGCCA 1 cut(s) 1247
Mly113I GGCGCC 1 cut(s) 656
MlyI GAGTC 6 cut(s) 65, 104, 109, 770, 801, 925
MmeI TCCRAC 6 cut(s) 39, 154, 183, 526, 832, 1360
Mox20I TGGCCA 1 cut(s) 1247
MroNI GCCGGC 1 cut(s) 517
MscI TGGCCA 1 cut(s) 1247
MseI TTAA 1 cut(s) 611
Msp20I TGGCCA 1 cut(s) 1247
MspI CCGG 3 cut(s) 518, 732, 982
MspR9I CCNGG 3 cut(s) 296, 398, 983
MvaI CCWGG 2 cut(s) 296, 398
MvnI CGCG 8 cut(s) 343, 412, 440, 515, 557, 690, 729, 755
MwoI GCNNNNNNNGC 9 cut(s) 198, 322, 349, 437, 573, 653, 664, 696, 1322
NaeI GCCGGC 1 cut(s) 519
NarI GGCGCC 1 cut(s) 656
NciI CCSGG 1 cut(s) 983
NdeII GATC 2 cut(s) 1040, 1174
NgoMIV GCCGGC 1 cut(s) 517
NheI GCTAGC 1 cut(s) 86
NlaIV GGNNCC 6 cut(s) 63, 96, 157, 483, 657, 1486
NmeAIII GCCGAG 2 cut(s) 468, 979
NmuCI GTSAC 6 cut(s) 101, 175, 434, 877, 1228, 1583
NsbI TGCGCA 1 cut(s) 575
NspI RCATGY 3 cut(s) 339, 592, 610
NspV TTCGAA 1 cut(s) 526
PaeR7I CTCGAG 1 cut(s) 821
PagI TCATGA 1 cut(s) 1237
PaqCI CACCTGC 1 cut(s) 607
PciI ACATGT 1 cut(s) 588
PciSI GCTCTTC 1 cut(s) 528
PcsI WCGNNNNNNNCGW 2 cut(s) 1148, 1256
PdiI GCCGGC 1 cut(s) 519
PfeI GAWTC 5 cut(s) 678, 855, 924, 978, 1465
PflFI GACNNNGTC 2 cut(s) 55, 99
PfoI TCCNGGA 1 cut(s) 294
PkrI GCNGC 1 cut(s) 1198
PleI GAGTC 6 cut(s) 64, 104, 108, 770, 801, 924
PluTI GGCGCC 1 cut(s) 659
PmaCI CACGTG 2 cut(s) 243, 910
PmlI CACGTG 2 cut(s) 243, 910
PpsI GAGTC 6 cut(s) 64, 104, 108, 770, 801, 924
Ppu21I YACGTR 4 cut(s) 243, 910, 1018, 1298
PscI ACATGT 1 cut(s) 588
Psp124BI GAGCTC 1 cut(s) 84
Psp1406I AACGTT 2 cut(s) 530, 766
Psp6I CCWGG 2 cut(s) 294, 396
PspCI CACGTG 2 cut(s) 243, 910
PspGI CCWGG 2 cut(s) 294, 396
PspN4I GGNNCC 6 cut(s) 63, 96, 157, 483, 657, 1486
PspPI GGNCC 6 cut(s) 51, 61, 95, 123, 995, 1485
PspXI VCTCGAGB 1 cut(s) 821
PstNI CAGNNNCTG 1 cut(s) 211
PsyI GACNNNGTC 2 cut(s) 55, 99
RsaI GTAC 2 cut(s) 587, 726
RsaNI GTAC 2 cut(s) 586, 725
SacI GAGCTC 1 cut(s) 84
SalI GTCGAC 1 cut(s) 1141
SapI GCTCTTC 1 cut(s) 528
SaqAI TTAA 1 cut(s) 611
SatI GCNGC 1 cut(s) 1197
Sau3AI GATC 2 cut(s) 1040, 1174
Sau96I GGNCC 6 cut(s) 51, 61, 95, 123, 995, 1485
SchI GAGTC 6 cut(s) 65, 104, 109, 770, 801, 925
ScrFI CCNGG 3 cut(s) 296, 398, 983
SduI GDGCHC 1 cut(s) 84
SexAI ACCWGGT 1 cut(s) 396
SfaNI GCATC 3 cut(s) 897, 1171, 1198
SfoI GGCGCC 1 cut(s) 657
Sfr274I CTCGAG 1 cut(s) 821
SfuI TTCGAA 1 cut(s) 526
SgrAI CRCCGGYG 1 cut(s) 731
SinI GGWCC 6 cut(s) 51, 61, 95, 123, 995, 1485
SlaI CTCGAG 1 cut(s) 821
SmlI CTYRAG 1 cut(s) 821
SmoI CTYRAG 1 cut(s) 821
SnaBI TACGTA 1 cut(s) 1298
Sse9I AATT 3 cut(s) 1111, 1475, 1562
SsiI CCGC 5 cut(s) 341, 557, 703, 760, 1184
SspDI GGCGCC 1 cut(s) 655
SspI AATATT 1 cut(s) 845
SspMI CTAG 3 cut(s) 87, 674, 1512
SstI GAGCTC 1 cut(s) 84
StyD4I CCNGG 3 cut(s) 294, 396, 981
StyI CCWWGG 2 cut(s) 673, 802
TaaI ACNGT 2 cut(s) 544, 1537
TaiI ACGT 8 cut(s) 245, 533, 769, 912, 945, 1020, 1230, 1300
TaqI TCGA 8 cut(s) 78, 393, 526, 822, 891, 974, 1039, 1142
TaqII GACCGA 3 cut(s) 68, 111, 112
TasI AATT 3 cut(s) 1111, 1475, 1562
TfiI GAWTC 5 cut(s) 678, 855, 924, 978, 1465
Tru1I TTAA 1 cut(s) 611
Tru9I TTAA 1 cut(s) 611
TscAI CASTG 1 cut(s) 1218
TseFI GTSAC 6 cut(s) 101, 175, 434, 877, 1228, 1583
TseI GCWGC 1 cut(s) 1196
Tsp45I GTSAC 6 cut(s) 101, 175, 434, 877, 1228, 1583
TspDTI ATGAA 6 cut(s) 394, 559, 1100, 1254, 1323, 1555
TspGWI ACGGA 3 cut(s) 960, 1061, 1248
TspRI CASTG 1 cut(s) 1218
Tth111I GACNNNGTC 2 cut(s) 55, 99
VpaK11BI GGWCC 6 cut(s) 51, 61, 95, 123, 995, 1485
XapI RAATTY 3 cut(s) 1111, 1475, 1562
XceI RCATGY 3 cut(s) 339, 592, 610
XhoI CTCGAG 1 cut(s) 821
XmaJI CCTAGG 1 cut(s) 673
XmiI GTMKAC 2 cut(s) 1142, 1300
XspI CTAG 3 cut(s) 87, 674, 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.