Prupe.8G137000_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0015508
Physical Location & Seq
Forward (+)
15682254 .. 15684343
2090 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G137000.2

Sequence Viewer

Length: 1596 bp
ATGCTTGACATTTGGTCATGGATATCCGACCTTCCCAACTCGGCCGAGTGGGCCGAGTCAGACTCACCACATACTTTTGAACTCGCTAGCTCCGGAGCGAGTTACGACAGCAACCCAACTCGGTCAATCCAACTCCGGGCCGAGCGCACCACAGGCTCCAACATCGACACTCTAGTGACTTTCTCAGTATGCTTGCACGGCTTCAACAACCAGTACCATCCTAAAAAGACGATCTGGGTTTCTGACACGTGTTCACTCTCCTCAGACAAACCCTACCTCCACCTGTTGCTCCAGCTCCTCCGAGAAATCATATCCCGCTCGCCCACCTCTCACGATAGCACCTGCCCGCGCTCCCAGCTCCAGACTCTCAAACCCGACCCATTTTCCTGGATCATGGACTCCCACTCCCCCGAGTCCTTCTCCACCTTCTTTGACCTCGTCTTTGTCACGCGCCTCTTCTGGCTCTGCGCGTGCGACTCTCCGACCGAAGTCGGCTCTCTGTACTTCAAATCCTTGCTGGCTCCCAACCTCGAAGCCTTGCTGTGCAAGCAAGCGCCGGCTCTCCGGACGTTTCTGATCACCGTCGGCGTGGACGCAGAGCTCTGCTTCATGCGCACCGTTGGGTACATGTTAGCAAAGTGGTGCATTTTAAGAGAGGTGGGTGTCGGCTTGCAGACGCTGACGTCATCGCCGTCGCAGAACTTGGGGTTCTCTTACGCGACGGAAGCTTGCGGGTTTTGGGTGCTCAAGGCTTACGCGCCGGTGATGGGGATGAGAACCACACGTTCCGTCAACTTGAACCAGAAAAATCAGTTTCCGGGTTTGGAAACTAGAGACTCGGTGCTAAAATATGCCTTGGCGCACCAGCAGCTGGAGGCGGTTGTTCAGGTGGAATATTCGGTTGGGTTTTACGACGGGTTTATTCAGGTGACTGCACATGTCGACAACCTGCGCTTCCACGTGGTGAACCTCGGATTCAACAAAAACGATGACGTGGACTACGCGGAGGAGAAGTATTTCCCGTCGAGAGTCCGGGTCTGGGTCGGGCCAGAAGTCGGGGCGAATTACGTGAACGGGTTGAGTTTGGGCCGGTCCACTGATAACGGAGAGAGAGAAGTCAAAACGCAGAGGATTACGAAGGGCAGTTTCGTAAAATCAAAGAGTCCGAAAGTGAAAACCGCGGGGAGGGTGTCGACGAGGATGAGGAAGAGGAACTGGAGGTGGGACCAGGACGCGGAGGGAAACGCCGCCGTATTCGATGCGGTGCTGTGCGACAACATGACGGGTCATGAAGTGGCCACGTGGAACCCGGCTATTGGGGAGCATAGTGACGGTTTGCGAAAGCGATACACTGGAGCAAATAGGCCGTTTACAAAAACGGGGAGTTTGGTGTTGAGTGGGGATGAGTATGGGGATGGGGTTGGGTGGAGATTGAACAGAGAGATGGAAGGGAGCGTGCTCAAGTGGAGAATAGGAGGGAAAGTTTGGTTGAGCTATTGGCCTAATGAGGTGAACAGTTCATATTTTGAGACAAGGTGTGTGGAGTGGTGTGATGAGGTTGATTTGCCTTTGATTATTGGTAAATTGAGTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

532

Amino Acids

59.77

Weight (kDa)

6.44

Isoelectric Point (pI)

38.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015508)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15020
fragaria_vesca FvH4_2g07860
malus_domestica MD00G1109200.v1.1
prunus_persica Prupe.8G137000_v2.0.a1 Prupe.8G137000_v2.0.a1
pyrus_communis pycom05g09120
rosa_chinensis RchiOBHm_Chr6g0262281
rosa_laevigata RLG00000014440
rosa_multiflora Rmu_sc0002510.1_g000031
rosa_roxburghii Rroxscaffold_7G00207970
rosa_rugosa Rorug05G0596200
rosa_samantha Rh6AG116400 Rh6BG110600 Rh6CG108000 Rh6DG098400
rosa_wichuraiana Rw6G010110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 350
AasI GACNNNNNNGTC 1 cut(s) 682
AatII GACGTC 1 cut(s) 686
Acc16I TGCGCA 1 cut(s) 614
Acc36I ACCTGC 2 cut(s) 350, 957
AccB7I CCANNNNNTGG 1 cut(s) 871
AccBSI CCGCTC 1 cut(s) 318
AccI GTMKAC 2 cut(s) 942, 1193
AccII CGCG 8 cut(s) 349, 451, 470, 719, 758, 1004, 1181, 1235
AccIII TCCGGA 2 cut(s) 92, 564
AclWI GGATC 1 cut(s) 398
AcoI YGGCCR 2 cut(s) 42, 1296
AcvI CACGTG 3 cut(s) 249, 961, 1302
AcyI GRCGYC 1 cut(s) 683
AdeI CACNNNGTG 1 cut(s) 964
AfaI GTAC 3 cut(s) 215, 503, 626
AfiI CCNNNNNNNGG 8 cut(s) 136, 767, 871, 1039, 1055, 1185, 1234, 1316
AflIII ACRYGT 5 cut(s) 246, 248, 627, 782, 937
AgsI TTSAA 6 cut(s) 80, 205, 508, 799, 979, 1435
AhdI GACNNNNNGTC 1 cut(s) 13
AjiI CACGTC 1 cut(s) 994
AjnI CCWGG 2 cut(s) 386, 1227
AjuI GAANNNNNNNTTGG 2 cut(s) 885, 917
AleI CACNNNNGTG 1 cut(s) 173
AluBI AGCT 7 cut(s) 90, 295, 358, 601, 728, 871, 1494
AluI AGCT 7 cut(s) 90, 295, 358, 601, 728, 871, 1494
Alw21I GWGCWC 3 cut(s) 603, 747, 1461
Alw26I GTCTC 2 cut(s) 828, 1523
AlwI GGATC 1 cut(s) 398
AlwNI CAGNNNCTG 2 cut(s) 679, 871
Ama87I CYCGRG 1 cut(s) 410
Aor13HI TCCGGA 2 cut(s) 92, 564
AoxI GGCC 8 cut(s) 42, 51, 138, 1046, 1087, 1296, 1364, 1499
ApeKI GCWGC 1 cut(s) 868
ArsI GACNNNNNNTTYG 2 cut(s) 425, 457
Asp700I GAANNNNTTC 1 cut(s) 1016
AspLEI GCGC 9 cut(s) 147, 351, 453, 470, 556, 615, 760, 862, 954
AspS9I GGNCC 6 cut(s) 51, 138, 1046, 1087, 1092, 1225
AsuC2I CCSGG 4 cut(s) 137, 819, 1034, 1310
AsuHPI GGTGA 6 cut(s) 57, 571, 775, 940, 976, 1522
AsuNHI GCTAGC 1 cut(s) 86
AvaI CYCGRG 1 cut(s) 410
AvaII GGWCC 2 cut(s) 1092, 1225
BalI TGGCCA 1 cut(s) 1298
BanII GRGCYC 1 cut(s) 603
BbrPI CACGTG 3 cut(s) 249, 961, 1302
Bbv12I GWGCWC 3 cut(s) 603, 747, 1461
BbvI GCAGC 1 cut(s) 880
BccI CCATC 4 cut(s) 225, 760, 1409, 1438
BceAI ACGGC 4 cut(s) 214, 676, 1235, 1351
BciT130I CCWGG 2 cut(s) 388, 1229
BclI TGATCA 1 cut(s) 576
BcnI CCSGG 4 cut(s) 137, 819, 1034, 1310
BcoDI GTCTC 2 cut(s) 828, 1523
BfaI CTAG 3 cut(s) 87, 173, 831
BfoI RGCGCY 1 cut(s) 557
BfuAI ACCTGC 2 cut(s) 350, 957
BglI GCCNNNNNGGC 1 cut(s) 50
BisI GCNGC 2 cut(s) 869, 1248
BlsI GCNGC 2 cut(s) 870, 1249
Bme1390I CCNGG 6 cut(s) 137, 388, 819, 1034, 1229, 1310
Bme18I GGWCC 2 cut(s) 1092, 1225
BmeRI GACNNNNNGTC 1 cut(s) 13
BmeT110I CYCGRG 1 cut(s) 410
BmgBI CACGTC 1 cut(s) 994
BmgT120I GGNCC 6 cut(s) 51, 138, 1046, 1087, 1092, 1225
BmiI GGNNCC 4 cut(s) 157, 522, 1226, 1307
BmrFI CCNGG 6 cut(s) 137, 388, 819, 1034, 1229, 1310
BmsI GCATC 1 cut(s) 1249
BmtI GCTAGC 1 cut(s) 90
BoxI GACNNNNGTC 1 cut(s) 488
BplI GAGNNNNNCTC 4 cut(s) 47, 79, 404, 436
BpmI CTGGAG 5 cut(s) 275, 344, 893, 1237, 1374
BpuEI CTTGAG 2 cut(s) 731, 1445
BpuMI CCSGG 4 cut(s) 137, 819, 1034, 1310
BsaAI YACGTR 4 cut(s) 249, 961, 1069, 1302
BsaHI GRCGYC 1 cut(s) 683
BsaJI CCNNGG 3 cut(s) 855, 970, 1179
BsaWI WCCGGW 2 cut(s) 92, 564
BsaXI ACNNNNNCTCC 8 cut(s) 261, 291, 389, 419, 998, 1028, 1467, 1497
Bsc4I CCNNNNNNNGG 8 cut(s) 136, 767, 871, 1039, 1055, 1185, 1234, 1316
Bse118I RCCGGY 3 cut(s) 556, 760, 1089
Bse1I ACTGG 3 cut(s) 211, 1220, 1357
BseAI TCCGGA 2 cut(s) 92, 564
BseBI CCWGG 2 cut(s) 388, 1229
BseDI CCNNGG 3 cut(s) 855, 970, 1179
BseGI GGATG 5 cut(s) 217, 777, 1206, 1408, 1420
BseLI CCNNNNNNNGG 8 cut(s) 136, 767, 871, 1039, 1055, 1185, 1234, 1316
BseMII CTCAG 2 cut(s) 198, 276
BseNI ACTGG 3 cut(s) 211, 1220, 1357
BseRI GAGGAG 3 cut(s) 250, 287, 1022
BseX3I CGGCCG 1 cut(s) 42
BseXI GCAGC 1 cut(s) 880
BseYI CCCAGC 1 cut(s) 354
BsgI GTGCAG 1 cut(s) 918
Bsh1236I CGCG 8 cut(s) 349, 451, 470, 719, 758, 1004, 1181, 1235
Bsh1285I CGRYCG 2 cut(s) 45, 486
BshFI GGCC 8 cut(s) 44, 53, 140, 1048, 1089, 1298, 1366, 1501
BsiEI CGRYCG 2 cut(s) 45, 486
BsiHKAI GWGCWC 3 cut(s) 603, 747, 1461
BsiHKCI CYCGRG 1 cut(s) 410
BsiSI CCGG 9 cut(s) 93, 136, 557, 565, 761, 818, 1033, 1090, 1310
BslFI GGGAC 1 cut(s) 1238
BslI CCNNNNNNNGG 8 cut(s) 136, 767, 871, 1039, 1055, 1185, 1234, 1316
BsmAI GTCTC 2 cut(s) 828, 1523
BsmFI GGGAC 1 cut(s) 1238
BsnI GGCC 8 cut(s) 44, 53, 140, 1048, 1089, 1298, 1366, 1501
BsoBI CYCGRG 1 cut(s) 410
Bsp1286I GDGCHC 3 cut(s) 603, 747, 1461
Bsp13I TCCGGA 2 cut(s) 92, 564
Bsp143I GATC 3 cut(s) 231, 390, 576
BspANI GGCC 8 cut(s) 44, 53, 140, 1048, 1089, 1298, 1366, 1501
BspCNI CTCAG 2 cut(s) 197, 275
BspEI TCCGGA 2 cut(s) 92, 564
BspFNI CGCG 8 cut(s) 349, 451, 470, 719, 758, 1004, 1181, 1235
BspHI TCATGA 1 cut(s) 1288
BspLI GGNNCC 4 cut(s) 157, 522, 1226, 1307
BspMI ACCTGC 2 cut(s) 350, 957
BspOI GCTAGC 1 cut(s) 90
BspPI GGATC 1 cut(s) 398
BsrBI CCGCTC 1 cut(s) 318
BsrFI RCCGGY 3 cut(s) 556, 760, 1089
BsrI ACTGG 3 cut(s) 211, 1220, 1357
BssAI RCCGGY 3 cut(s) 556, 760, 1089
BssECI CCNNGG 3 cut(s) 855, 970, 1179
BssMI GATC 3 cut(s) 231, 390, 576
BssNI GRCGYC 1 cut(s) 683
BssT1I CCWWGG 1 cut(s) 855
Bst2UI CCWGG 2 cut(s) 388, 1229
Bst4CI ACNGT 4 cut(s) 583, 619, 1334, 1517
Bst6I CTCTTC 2 cut(s) 461, 1202
BstACI GRCGYC 1 cut(s) 683
BstBAI YACGTR 4 cut(s) 249, 961, 1069, 1302
BstDEI CTNAG 2 cut(s) 184, 262
BstDSI CCRYGG 1 cut(s) 1179
BstF5I GGATG 5 cut(s) 217, 777, 1206, 1408, 1420
BstFNI CGCG 8 cut(s) 349, 451, 470, 719, 758, 1004, 1181, 1235
BstH2I RGCGCY 1 cut(s) 557
BstHHI GCGC 9 cut(s) 147, 351, 453, 470, 556, 615, 760, 862, 954
BstKTI GATC 3 cut(s) 234, 393, 579
BstMAI GTCTC 2 cut(s) 828, 1523
BstMBI GATC 3 cut(s) 231, 390, 576
BstMCI CGRYCG 2 cut(s) 45, 486
BstMWI GCNNNNNNNGC 8 cut(s) 50, 153, 198, 355, 547, 612, 725, 868
BstNI CCWGG 2 cut(s) 388, 1229
BstNSI RCATGY 2 cut(s) 631, 941
BstPAI GACNNNNGTC 1 cut(s) 488
BstSCI CCNGG 6 cut(s) 135, 386, 817, 1032, 1227, 1308
BstUI CGCG 8 cut(s) 349, 451, 470, 719, 758, 1004, 1181, 1235
BstV1I GCAGC 1 cut(s) 880
BstXI CCANNNNNNTGG 1 cut(s) 387
BstZI CGGCCG 1 cut(s) 42
BsuRI GGCC 8 cut(s) 44, 53, 140, 1048, 1089, 1298, 1366, 1501
BtgI CCRYGG 1 cut(s) 1179
BtgZI GCGATG 1 cut(s) 672
BtrI CACGTC 1 cut(s) 994
BtsCI GGATG 5 cut(s) 217, 777, 1206, 1408, 1420
BtsIMutI CAGTG 2 cut(s) 1095, 1350
BveI ACCTGC 2 cut(s) 350, 957
CaiI CAGNNNCTG 2 cut(s) 679, 871
CciI TCATGA 1 cut(s) 1288
CfoI GCGC 9 cut(s) 147, 351, 453, 470, 556, 615, 760, 862, 954
Cfr10I RCCGGY 3 cut(s) 556, 760, 1089
Cfr13I GGNCC 6 cut(s) 51, 138, 1046, 1087, 1092, 1225
Cfr42I CCGCGG 1 cut(s) 1182
CseI GACGC 3 cut(s) 602, 685, 1241
Csp6I GTAC 3 cut(s) 214, 502, 625
CspCI CAANNNNNGTGG 4 cut(s) 412, 447, 1521, 1556
CviAII CATG 7 cut(s) 18, 394, 610, 628, 938, 1279, 1289
CviQI GTAC 3 cut(s) 214, 502, 625
DdeI CTNAG 2 cut(s) 184, 262
DpnI GATC 3 cut(s) 233, 392, 578
DpnII GATC 3 cut(s) 231, 390, 576
DraIII CACNNNGTG 1 cut(s) 964
DrdI GACNNNNNNGTC 1 cut(s) 682
DriI GACNNNNNGTC 1 cut(s) 13
DseDI GACNNNNNNGTC 1 cut(s) 682
EaeI YGGCCR 2 cut(s) 42, 1296
EagI CGGCCG 1 cut(s) 42
Eam1104I CTCTTC 2 cut(s) 461, 1202
Eam1105I GACNNNNNGTC 1 cut(s) 13
EarI CTCTTC 2 cut(s) 461, 1202
Ecl136II GAGCTC 1 cut(s) 601
EclXI CGGCCG 1 cut(s) 42
Eco130I CCWWGG 1 cut(s) 855
Eco24I GRGCYC 1 cut(s) 603
Eco32I GATATC 1 cut(s) 24
Eco47I GGWCC 2 cut(s) 1092, 1225
Eco52I CGGCCG 1 cut(s) 42
Eco53kI GAGCTC 1 cut(s) 601
Eco72I CACGTG 3 cut(s) 249, 961, 1302
Eco88I CYCGRG 1 cut(s) 410
EcoICRI GAGCTC 1 cut(s) 601
EcoRII CCWGG 2 cut(s) 386, 1227
EcoRV GATATC 1 cut(s) 24
EcoT14I CCWWGG 1 cut(s) 855
EcoT38I GRGCYC 1 cut(s) 603
ErhI CCWWGG 1 cut(s) 855
FaeI CATG 7 cut(s) 21, 397, 613, 631, 941, 1282, 1292
FaqI GGGAC 1 cut(s) 1238
FatI CATG 7 cut(s) 17, 393, 609, 627, 937, 1278, 1288
FauI CCCGC 4 cut(s) 323, 354, 725, 1174
FbaI TGATCA 1 cut(s) 576
FblI GTMKAC 2 cut(s) 942, 1193
Fnu4HI GCNGC 2 cut(s) 869, 1248
FokI GGATG 5 cut(s) 204, 784, 1213, 1415, 1427
FriOI GRGCYC 1 cut(s) 603
Fsp4HI GCNGC 2 cut(s) 869, 1248
FspAI RTGCGCAY 1 cut(s) 614
FspBI CTAG 3 cut(s) 87, 173, 831
FspI TGCGCA 1 cut(s) 614
GlaI GCGC 9 cut(s) 146, 350, 452, 469, 555, 614, 759, 861, 953
GluI GCNGC 2 cut(s) 869, 1248
GsaI CCCAGC 1 cut(s) 358
GsuI CTGGAG 5 cut(s) 275, 344, 893, 1237, 1374
HaeII RGCGCY 1 cut(s) 557
HaeIII GGCC 8 cut(s) 44, 53, 140, 1048, 1089, 1298, 1366, 1501
HapII CCGG 9 cut(s) 93, 136, 557, 565, 761, 818, 1033, 1090, 1310
HgaI GACGC 3 cut(s) 602, 685, 1241
HhaI GCGC 9 cut(s) 147, 351, 453, 470, 556, 615, 760, 862, 954
Hin1I GRCGYC 1 cut(s) 683
Hin1II CATG 7 cut(s) 21, 397, 613, 631, 941, 1282, 1292
Hin6I GCGC 9 cut(s) 145, 349, 451, 468, 554, 613, 758, 860, 952
HinP1I GCGC 9 cut(s) 145, 349, 451, 468, 554, 613, 758, 860, 952
HincII GTYRAC 3 cut(s) 793, 943, 1194
HindII GTYRAC 3 cut(s) 793, 943, 1194
HindIII AAGCTT 1 cut(s) 726
HpaII CCGG 9 cut(s) 93, 136, 557, 565, 761, 818, 1033, 1090, 1310
HphI GGTGA 6 cut(s) 57, 571, 775, 940, 976, 1522
Hpy188I TCNGA 9 cut(s) 28, 61, 244, 265, 302, 483, 576, 974, 1167
Hpy188III TCNNGA 6 cut(s) 93, 332, 361, 565, 1026, 1289
Hpy99I CGWCG 6 cut(s) 587, 697, 724, 917, 1027, 1198
HpyAV CCTTC 5 cut(s) 41, 427, 436, 1132, 1442
HpyCH4III ACNGT 4 cut(s) 583, 619, 1334, 1517
HpyCH4IV ACGT 8 cut(s) 248, 569, 683, 784, 960, 993, 1068, 1301
HpyCH4V TGCA 5 cut(s) 196, 546, 645, 673, 935
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 153, 198, 355, 547, 612, 725, 868
HpyF3I CTNAG 2 cut(s) 184, 262
HpySE526I ACGT 8 cut(s) 248, 569, 683, 784, 960, 993, 1068, 1301
Hsp92I GRCGYC 1 cut(s) 683
Hsp92II CATG 7 cut(s) 21, 397, 613, 631, 941, 1282, 1292
HspAI GCGC 9 cut(s) 145, 349, 451, 468, 554, 613, 758, 860, 952
Kpn2I TCCGGA 2 cut(s) 92, 564
KroI GCCGGC 1 cut(s) 556
KroNI GCCGGC 1 cut(s) 558
Ksp22I TGATCA 1 cut(s) 576
KspI CCGCGG 1 cut(s) 1182
Kzo9I GATC 3 cut(s) 231, 390, 576
Lsp1109I GCAGC 1 cut(s) 880
LweI GCATC 1 cut(s) 1249
MaeI CTAG 3 cut(s) 87, 173, 831
MaeII ACGT 8 cut(s) 248, 569, 683, 784, 960, 993, 1068, 1301
MaeIII GTNAC 5 cut(s) 101, 175, 445, 928, 1328
MalI GATC 3 cut(s) 233, 392, 578
MbiI CCGCTC 1 cut(s) 318
MboI GATC 3 cut(s) 231, 390, 576
MboII GAAGA 2 cut(s) 448, 1219
MhlI GDGCHC 3 cut(s) 603, 747, 1461
MlsI TGGCCA 1 cut(s) 1298
MluCI AATT 2 cut(s) 1063, 1583
MluNI TGGCCA 1 cut(s) 1298
MlyI GAGTC 9 cut(s) 56, 65, 358, 392, 422, 470, 830, 1038, 1171
MmeI TCCRAC 4 cut(s) 51, 154, 183, 506
Mox20I TGGCCA 1 cut(s) 1298
MroI TCCGGA 2 cut(s) 92, 564
MroNI GCCGGC 1 cut(s) 556
MroXI GAANNNNTTC 1 cut(s) 1016
MscI TGGCCA 1 cut(s) 1298
MseI TTAA 1 cut(s) 650
MslI CAYNNNNRTG 1 cut(s) 173
Msp20I TGGCCA 1 cut(s) 1298
MspA1I CMGCKG 2 cut(s) 871, 1181
MspI CCGG 9 cut(s) 93, 136, 557, 565, 761, 818, 1033, 1090, 1310
MspR9I CCNGG 6 cut(s) 137, 388, 819, 1034, 1229, 1310
MvaI CCWGG 2 cut(s) 388, 1229
MvnI CGCG 8 cut(s) 349, 451, 470, 719, 758, 1004, 1181, 1235
MwoI GCNNNNNNNGC 8 cut(s) 50, 153, 198, 355, 547, 612, 725, 868
NaeI GCCGGC 1 cut(s) 558
NciI CCSGG 4 cut(s) 137, 819, 1034, 1310
NdeII GATC 3 cut(s) 231, 390, 576
NgoMIV GCCGGC 1 cut(s) 556
NheI GCTAGC 1 cut(s) 86
NlaIII CATG 7 cut(s) 21, 397, 613, 631, 941, 1282, 1292
NlaIV GGNNCC 4 cut(s) 157, 522, 1226, 1307
NmeAIII GCCGAG 4 cut(s) 20, 70, 79, 166
NmuCI GTSAC 4 cut(s) 175, 445, 928, 1328
NsbI TGCGCA 1 cut(s) 614
NspI RCATGY 2 cut(s) 631, 941
OliI CACNNNNGTG 1 cut(s) 173
PagI TCATGA 1 cut(s) 1288
PaqCI CACCTGC 1 cut(s) 350
PciI ACATGT 2 cut(s) 627, 937
PcsI WCGNNNNNNNCGW 1 cut(s) 689
PdiI GCCGGC 1 cut(s) 558
PdmI GAANNNNTTC 1 cut(s) 1016
PfeI GAWTC 1 cut(s) 975
PflFI GACNNNGTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 871
PfoI TCCNGGA 1 cut(s) 386
PkrI GCNGC 2 cut(s) 870, 1249
PleI GAGTC 9 cut(s) 56, 64, 358, 392, 421, 470, 830, 1037, 1170
PmaCI CACGTG 3 cut(s) 249, 961, 1302
PmlI CACGTG 3 cut(s) 249, 961, 1302
PpsI GAGTC 9 cut(s) 56, 64, 358, 392, 421, 470, 830, 1037, 1170
Ppu21I YACGTR 4 cut(s) 249, 961, 1069, 1302
PscI ACATGT 2 cut(s) 627, 937
PshAI GACNNNNGTC 1 cut(s) 488
Psp124BI GAGCTC 1 cut(s) 603
Psp6I CCWGG 2 cut(s) 386, 1227
PspCI CACGTG 3 cut(s) 249, 961, 1302
PspFI CCCAGC 1 cut(s) 354
PspGI CCWGG 2 cut(s) 386, 1227
PspN4I GGNNCC 4 cut(s) 157, 522, 1226, 1307
PspPI GGNCC 6 cut(s) 51, 138, 1046, 1087, 1092, 1225
PstNI CAGNNNCTG 2 cut(s) 679, 871
PsyI GACNNNGTC 1 cut(s) 437
PvuII CAGCTG 1 cut(s) 871
RsaI GTAC 3 cut(s) 215, 503, 626
RsaNI GTAC 3 cut(s) 214, 502, 625
RseI CAYNNNNRTG 1 cut(s) 173
SacI GAGCTC 1 cut(s) 603
SacII CCGCGG 1 cut(s) 1182
SalI GTCGAC 2 cut(s) 941, 1192
SaqAI TTAA 1 cut(s) 650
SatI GCNGC 2 cut(s) 869, 1248
Sau3AI GATC 3 cut(s) 231, 390, 576
Sau96I GGNCC 6 cut(s) 51, 138, 1046, 1087, 1092, 1225
SchI GAGTC 9 cut(s) 56, 65, 358, 392, 422, 470, 830, 1038, 1171
ScrFI CCNGG 6 cut(s) 137, 388, 819, 1034, 1229, 1310
SduI GDGCHC 3 cut(s) 603, 747, 1461
SfaNI GCATC 1 cut(s) 1249
SfiI GGCCNNNNNGGCC 1 cut(s) 50
Sfr303I CCGCGG 1 cut(s) 1182
SgrAI CRCCGGYG 1 cut(s) 760
SgrBI CCGCGG 1 cut(s) 1182
SinI GGWCC 2 cut(s) 1092, 1225
SmiMI CAYNNNNRTG 1 cut(s) 173
SmlI CTYRAG 2 cut(s) 746, 1460
SmoI CTYRAG 2 cut(s) 746, 1460
Sse9I AATT 2 cut(s) 1063, 1583
SspI AATATT 1 cut(s) 896
SspMI CTAG 3 cut(s) 87, 173, 831
SstI GAGCTC 1 cut(s) 603
StyD4I CCNGG 6 cut(s) 135, 386, 817, 1032, 1227, 1308
StyI CCWWGG 1 cut(s) 855
TaaI ACNGT 4 cut(s) 583, 619, 1334, 1517
TaiI ACGT 8 cut(s) 251, 572, 686, 787, 963, 996, 1071, 1304
TaqI TCGA 6 cut(s) 165, 531, 942, 1025, 1193, 1257
TaqII GACCGA 2 cut(s) 111, 500
TasI AATT 2 cut(s) 1063, 1583
TatI WGTACW 1 cut(s) 501
TauI GCSGC 1 cut(s) 1250
TfiI GAWTC 1 cut(s) 975
Tru1I TTAA 1 cut(s) 650
Tru9I TTAA 1 cut(s) 650
TscAI CASTG 2 cut(s) 1102, 1357
TseFI GTSAC 4 cut(s) 175, 445, 928, 1328
TseI GCWGC 1 cut(s) 868
Tsp45I GTSAC 4 cut(s) 175, 445, 928, 1328
TspDTI ATGAA 3 cut(s) 598, 1305, 1509
TspGWI ACGGA 3 cut(s) 737, 778, 1119
TspRI CASTG 2 cut(s) 1102, 1357
Tth111I GACNNNGTC 1 cut(s) 437
Van91I CCANNNNNTGG 1 cut(s) 871
VpaK11BI GGWCC 2 cut(s) 1092, 1225
XceI RCATGY 2 cut(s) 631, 941
XmiI GTMKAC 2 cut(s) 942, 1193
XmnI GAANNNNTTC 1 cut(s) 1016
XspI CTAG 3 cut(s) 87, 173, 831
ZraI GACGTC 1 cut(s) 684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.