Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0006461

Physical Location & Seq

Genomic Coordinates Forward (+)

13152030 .. 13164044

Gene Structure 12015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g14980.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4893 bp

ATGGGGTTTGAAGCCCTGGATTGGTATTGTCGCCCGGTGGCCAATGGTGTCTGGGCAAGAGCTGTGCTGAATGCCTTTGGTGCATACACTCCGTGTGCAGTTGAGTCTCTAGTTGTCACCTTTTCTCAGTTGGTTCTTCTGGGTCTGTGCATATATCGAATATGGAGGATCAAGAAGGACTTCAAAGCCCAAAGATACTGTTTGAAGTCCAAACTGTACAACTATATGCTGGCCTTGTTGGCTGGTTACTGTACTGCCGAGCCTCTCTTTAGATTGATCATGGGAATTTCAGTGCTGAATTTAGATGGTCAGATTGGCCTTGCGCCATTTGAGGTGGTTTCTCTGATCTTACAGTCTCTTTCTTGGTGCTTTATGCTGATCATGATTGGTGTGGAAACCAAGATCTATATCTGTGAGTTTCGATGGTTTGTAAGATTTGGAGTAATATATAATATAGTAGGAGATGCTGTGCTGTTCAATCTCATTTTTACAGTGAAGGACTTCTACAACAGATCTGTGTTATACTTGTACATCAGTGAAATTGTTGCTCAGGTTTTGTTTGGAATTCTTTTGGCTGTGTATGTTCCAAATTTGGTTCCATATCCTGGTTATACTCCAATCCAAACTGAATCAATTGATGATGCTGCATACGAAGAGCTTCCTGGAGGAGAGCATATATGTCCTGAGAGGCAGGCCAACATATTCTCAAGAGTAATATTTTCATGGATGAATCCCCTTATGAAGCTAGGCTATAAGAGACCCCTCACGGAGAAAGATATTTGGAAATTGGATACTTGGGAGCGAACTGAAACACTGAACAATAAGTTTCAAAAATGTTGGGCTGAGGAATTACGAAAGCCTAAACCATGGCTTTTAAGAGCGTTGAACTCTAGCCTTGGGGGAAGGTTTTGGTGGGGAGGCTTTTGGAAGATTGGCAATGATCTTTCCCAGTTTACAGGGCCACTCATTTTGAATCAGCTCTTACAGTCTATGCAACGAGGGGATCCAGCACGGATTGGTTACATCTATGCCTTCTCAATATTTCTTGGAGTGACCGCTGGTGTGTTATGCGAAGCTCAGTATTTTCAAAATGTTATGCGTGTTGGTTACCGGCTACGGTCAACACTGGTTGCTGCTGTGTTTCGGAAATCTTTAAGGCTTACTCATGAAGCTCGAAAGAAGTTTCCATCTGGAAAGATTACCAACCTGATGACAACTGATGCTGAAGCACTTCAGCAAGTAACGCAGTCTCTTCACACTTTGTGGTCAGCGCCATTTCGTATCACAATCTGCATGGTTCTCCTTTACCAGGAATTGGGTGTTGCTTCACTACTTGGTGCACTCATGTTAGTTCTTATGTTCCCACTACAGACATTTGTTATTAGCAAAATGCAGAAATTGTCTAAGGAGGGGTTGCAACGTACAGACAAGAGAATTGGCCTAATGAATGAAATTTTGGCTGCAATGGACACTGTGAAATGTTATGCATGGGAGAGTAGTTTTCAATCCAAGGTACAAAGTGTCCGAACTGAAGAATTGGACTGGTTTCGGAAAGCATCACTACTGGGAGCGTGTAATGGATTTATACTAAATAGCATCCCAGTTGTGGTCACTGTGATTTCCTTTGGATTGTACACTTTGCTTGGGGGAAATCTCACACCTGCAAGGGCATTCACATCACTGTCTCTATTTGCTGTGCTTCGATTTCCTCTGTTCATGCTTCCTAATATAATAACTCAGGCAGTTAATGCTAATGTATCCTTAAAGCGCCTGGAGGAGTTACTTTTAGCAGAAGAGCGAGTTCTTCTGCCAAATCCTCCTCTTGATCCAGTACTGCCAGCCATCTCAATTAAGAATGGATTCTTTTCTTGGGATTCAAAGGCAGAGAAGCCCACGCTGTCAAATATTAATTTGGATATTCCTGTTGGGAGCTTGGTCGCAGTTGTTGGCAGTACTGGTGAAGGGAAGACGTCACTTATATCTGCTATGCTAGGGGAGCTTCCTTCTGTAGCAGATACAAGTGTTGTAATGAGAGGAATGGTTGCTTATGTTCCACAAGTTTCATGGATTTTTAATGCAACCGTACGTGACAACATTTTATTTGGATCGTTCTTTGAGTCTTCAAGATATCAGAAGGCAATTGATGTGACTGCATTGCGGCATGACCTTGACTTATTGCCTGGTGGTGACCTGACTGAGATTGGTGAAAGAGGAGTGAATATTAGTGGTGGACAGAAGCAAAGAGTCTCTATGGCTAGGGCTGTCTACTCCAATTCTGATGTATACGTTTTTGATGATCCCTTAAGTGCCCTTGATGCTCATGTGGCTCGACAGGTTTTTGATAAATGCATCAAGGGAGAGTTAAGAGGGAAAACCAGAGTCCTTGTTACCAATCAGCTACATTTTCTTTCCCAAGTTGATAGAATCATTTTGGTTCATGATGGAATGGTGAAAGAGGAGGGAACATTTGAGGAGCTTTCCAACAATGGTGTGCTGTTCCAAAGGCTAATGGAAAATGCGGGAAAGATGGAAGAATATGCGGAAGAGAAAGAAGATGATGAAATTGTTGATCAGAATGGCGTCACGATTGATCATAATGCCTCTTCGAAACCTATTGCCAATGGGGTAGTCCATGATATGTCAAAAACTGCAAGCCATGCAAATAAACAAAAAGAAGGAAAATCTGTTCTCATTAAACAAGAGGAACGGGAAACAGGAGTAGTCAGCGTGAAGGTCTTGGCAAGGTATAAGAATGCATTAGGAGGCTTGTGGGTGGTTCTCATACTCTTTACATGCTATATTTCAACTGAGGTTCTACGAGTTTCAAGTAGCACGTGGTTGAGTCATTGGACTAATCAAGGCATGTCAGGGACATATGACCCTGGTTTCTACAATCTGATATATGCTCTTCTATCTGTTGGTCAGGTTATGGTGACACTGGCAAACTCTTATTGGTTGATTATTTCTAGTCTTTATGCTGCCAGGAGGTTGCATGATGCCATGCTTGGGTCCATATTAAGAGCTCCTATGGTCTTTTTCCAGACCAATCCCCTTGGCAGGATAATCAATAGATTTGCAAAGGATCTTGGAGATATTGATCGGAATGTCGCTCCATTTGTAAACATGTTTCTTGGTCAAGTGTCTCAGCTTTTTTCTACTTTCGTATTAATAGGGATCGTGAGCACTATGTCCTTGTGGGCCATTCTGCCTCTTCTGGTCTTGTTTTATGCAGCCTATTTATATTATCAGAGCATGGCCCGAGAGGTGAAGCGCTTGGACTCCATCAGCAGATCCCCTGTTTATGCTCAATTTGGAGAAGCATTGAATGGTATATCCTCAATTCGTGCATATAAGGCTTATGATCGGATGGCAGACATTAATGGAAAGTCTGTAGACAACAATATCAGATTCACGCTGGTGAATATAAGTGCAAATCGGTGGCTCGCAATCCGTTTGGAAACATTGGGAGGTCTCATGATATGGTTTACAGCTACCTTTGCGGTTATGCAGAATGGACGGGCTGAGAATCAACAGGAGTTTGCAGCCACTATGGGTTTACTTCTTAGTTATGCTCTTAATATTACAAGTCTAATGACTGGTGTATTGAGACTTGCAAGTCTGGCTGAGAATAGCTTAAATGCTGTTGAGCGGGTTGGTACATATATAGAGTTGCCTTCTGAAGCTCCTGCTGTAATTGAGAGCAACCGCCCCCCACCAGGATGGCCTTCATCTGGATCTATTAAGTTTGAAGATGTTGCTCTGCGTTATAGACCTGAACTTCCTCCAGTTTTGCATGACTTGTCTTTCACAATTTCTCCTAGCGACAAGGTCGGAATAGTTGGAAGGACTGGGGCAGGGAAGTCCAGCATGCTAAATGCTTTATTTCGAATTGTTGAATTAGAGAGAGGAAGAATTTTGATTGATGGTTGTGATATCGGTAAGTTTGGACTCGAAGATCTACGGAAAGTTCTTGGTATTATTCCACAGGCACCCGTTCTATTTTCAGGAACCGTGAGATTCAATCTCGATCCATTTCAAGAACATAATGACGCTGATCTATGGGAGGCTTTAGAGAGGGCACATTTGAAGGATGCCATCAGGAGGAATTCTTTGGGTTTATATGCCGAGGTCTCGGAGTCGGGAGAGAATTTCAGTGTTGGACAGCGTCAACTATTGAGTCTTGCTCGAGCACTATTGAGAAGATCAAAAATACTTGTTCTTGACGAAGCAACTGCAGCTGTCGATGTCAGAACTGATGCTCTTATTCAGAAAACTATTCGTGAAGAATTTAAATCCTGTACAATGCTCATTATTGCTCATCGTCTAAATACCATTATTGACTGTGACCGAATCCTTCTGCTTGATAATGGCCGGGTTCGAGAATATGACACTCCAGAGCACTTGCTGTCAAATGAGAGAAGTGCTTTCTCTAAAATGGTCCAAAGCACAGGCGCAGCAAATGCACAATATTTAAGAAGCTTGGTCCTTGGGGAGGGAGGAGAAAACAGAAGAGTGGATAACAACCAACTAGATGGACAGAGGAGATGGCTGGCCTCATCTCGCTGGGCTGCAGCTGCCCAGTTTGCAGTTGCTGTTAGCCTTACTTCATCCCAGAATGACCTTCAAAGGTTGGAGTTTGAAGACCAGGACAGTATTCTCTTTAAGACGAAGGACGCTGTAATAACTCTCCGAGGAGTCTTGGAAGGGAAACATGACAAACTTATTGAAGAGTCACTTGATCAGTACCAGATCTCAAGAGATGGGTGGTGGTCATCTCTTTACCGAATGGTTGAAGGTCTTGCTGTAATGAGTAGACTGTCGAGGAATAGGCTTCACCAGTCAGAAATTGGTTTTGAAGACAGATCGATCGACTGGGACCATGCTGACATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0042946 GO:0042947 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098588 GO:0098805 GO:1901264 GO:1901505 GO:1901656 GO:1902417 GO:1902418

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04071 ko04976 ko04977 ko05206 map01523 map01524 map02010 map04071 map04976 map04977 map05206

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1631

Amino Acids

182.88

Weight (kDa)

7.92

Isoelectric Point (pI)

41.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	154 - 418	4.3e-36	ABC transporter transmembrane region
ABC_tran	PF00005	480 - 615	1.8e-16	ABC transporter
ABC_membrane	PF00664	774 - 1017	9.7e-34	ABC transporter transmembrane region
ABC_tran	PF00005	1111 - 1259	1.4e-26	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30400 AT1G30400 AT2G34660 AT2G34660 AT2G34660
fragaria_vesca	FvH4_2g14980 FvH4_2g14980 FvH4_2g14980
malus_domestica	MD05G1275500.v1.1
prunus_persica	Prupe.4G088500_v2.0.a1 Prupe.4G088500_v2.0.a1 Prupe.4G088500_v2.0.a1 Prupe.4G088500_v2.0.a1 Prupe.4G088500_v2.0.a1
pyrus_communis	pycom05g25670 pycom10g21060
rosa_chinensis	RchiOBHm_Chr5g0015421
rosa_laevigata	RLG00000032198
rosa_multiflora	Rmu_ssc0000168.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061060
rosa_rugosa	Rorug05G0027300
rosa_samantha	Rh5AG120900 Rh5BG119700 Rh5CG130500 Rh5DG118800
rosa_wichuraiana	Rw5G010440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1669
AasI	GACNNNNNNGTC	1 cut(s)	3615
AatII	GACGTC	1 cut(s)	1973
Acc36I	ACCTGC	1 cut(s)	1669
AccB1I	GGYRCC	1 cut(s)	3988
AccB7I	CCANNNNNTGG	2 cut(s)	605, 1315
AccBSI	CCGCTC	1 cut(s)	3649
AccI	GTMKAC	4 cut(s)	2265, 2283, 3393, 4813
AciI	CCGC	7 cut(s)	1056, 2158, 2519, 2540, 3500, 3649, 3706
AcoI	YGGCCR	2 cut(s)	39, 4369
AcsI	RAATTY	9 cut(s)	285, 298, 564, 589, 1452, 3912, 4105, 4147, 4286
AcuI	CTGAAG	4 cut(s)	1217, 1245, 1551, 3699
AcvI	CACGTG	1 cut(s)	2835
AcyI	GRCGYC	2 cut(s)	1970, 2580
AdeI	CACNNNGTG	2 cut(s)	93, 1263
AfeI	AGCGCT	1 cut(s)	3272
AflII	CTTAAG	1 cut(s)	2302
AflIII	ACRYGT	2 cut(s)	3123, 4887
AjuI	GAANNNNNNNTTGG	2 cut(s)	1439, 1471
AleI	CACNNNNGTG	1 cut(s)	3416
AloI	GAACNNNNNNTCC	2 cut(s)	2670, 2702
Alw21I	GWGCWC	5 cut(s)	1342, 3025, 3185, 4192, 4401
Alw44I	GTGCAC	1 cut(s)	1338
AlwNI	CAGNNNCTG	1 cut(s)	4592
Ama87I	CYCGRG	2 cut(s)	3258, 4185
Aor51HI	AGCGCT	1 cut(s)	3272
ApaLI	GTGCAC	1 cut(s)	1338
ApoI	RAATTY	9 cut(s)	285, 298, 564, 589, 1452, 3912, 4105, 4147, 4286
AseI	ATTAAT	3 cut(s)	1908, 3167, 3378
Asp700I	GAANNNNTTC	5 cut(s)	179, 500, 657, 1230, 1859
AspLEI	GCGC	5 cut(s)	325, 1273, 1770, 3273, 4454
AspS9I	GGNCC	7 cut(s)	959, 3009, 3198, 3256, 4438, 4483, 4876
AsuC2I	CCSGG	2 cut(s)	35, 4373
AsuHPI	GGTGA	9 cut(s)	109, 1970, 2198, 2216, 2461, 2944, 3277, 3430, 4826
AsuII	TTCGAA	2 cut(s)	2606, 3886
AvaI	CYCGRG	2 cut(s)	3258, 4185
AvaII	GGWCC	4 cut(s)	3009, 4438, 4483, 4876
BaeGI	GKGCMC	3 cut(s)	1342, 2311, 4081
BaeI	ACNNNNGTAYC	2 cut(s)	2007, 2040
BalI	TGGCCA	1 cut(s)	41
BamHI	GGATCC	1 cut(s)	1003
BanI	GGYRCC	1 cut(s)	3988
BanII	GRGCYC	1 cut(s)	3025
BarI	GAAGNNNNNNTAC	2 cut(s)	488, 520
BbrPI	CACGTG	1 cut(s)	2835
BbsI	GAAGAC	4 cut(s)	1973, 2112, 4647, 4863
Bbv12I	GWGCWC	5 cut(s)	1342, 3025, 3185, 4192, 4401
BbvCI	CCTCAGC	1 cut(s)	843
BcgI	CGANNNNNNTGC	2 cut(s)	4214, 4248
BciVI	GTATCC	2 cut(s)	784, 1768
BclI	TGATCA	5 cut(s)	276, 378, 2569, 2590, 4738
BcnI	CCSGG	2 cut(s)	35, 4373
BfaI	CTAG	8 cut(s)	110, 746, 891, 1991, 2256, 2967, 3819, 4529
BfmI	CTRYAG	5 cut(s)	1367, 2007, 3390, 4233, 4569
BfoI	RGCGCY	3 cut(s)	1274, 1771, 3274
BfrI	CTTAAG	1 cut(s)	2302
BfuAI	ACCTGC	1 cut(s)	1669
BfuI	GTATCC	2 cut(s)	784, 1768
BglI	GCCNNNNNGGC	1 cut(s)	239
BglII	AGATCT	4 cut(s)	402, 512, 3955, 4749
BmcAI	AGTACT	2 cut(s)	1833, 1954
Bme18I	GGWCC	4 cut(s)	3009, 4438, 4483, 4876
BmeT110I	CYCGRG	2 cut(s)	3258, 4185
BmgT120I	GGNCC	7 cut(s)	959, 3009, 3198, 3256, 4438, 4483, 4876
BmiI	GGNNCC	6 cut(s)	597, 1005, 3010, 3990, 4009, 4877
BmrI	ACTGGG	6 cut(s)	943, 1574, 1595, 3858, 4573, 4882
BmuI	ACTGGG	6 cut(s)	943, 1574, 1595, 3858, 4573, 4882
BpiI	GAAGAC	4 cut(s)	1973, 2112, 4647, 4863
BplI	GAGNNNNNCTC	2 cut(s)	4168, 4200
BpmI	CTGGAG	4 cut(s)	684, 1793, 3768, 4377
Bpu10I	CCTNAGC	2 cut(s)	549, 843
Bpu14I	TTCGAA	2 cut(s)	2606, 3886
BpuEI	CTTGAG	2 cut(s)	691, 4738
BpuMI	CCSGG	2 cut(s)	35, 4373
Bsa29I	ATCGAT	1 cut(s)	4865
BsaAI	YACGTR	2 cut(s)	2087, 2835
BsaBI	GATNNNNATC	2 cut(s)	407, 3096
BsaHI	GRCGYC	2 cut(s)	1970, 2580
BsaI	GGTCTC	3 cut(s)	751, 3476, 4135
BsaJI	CCNNGG	9 cut(s)	15, 866, 895, 1509, 2881, 3052, 4125, 4486, 4690
BsaXI	ACNNNNNCTCC	4 cut(s)	453, 483, 3799, 3829
Bse118I	RCCGGY	1 cut(s)	1110
Bse3DI	GCAATG	3 cut(s)	943, 1470, 2153
Bse8I	GATNNNNATC	2 cut(s)	407, 3096
BseCI	ATCGAT	1 cut(s)	4865
BseDI	CCNNGG	9 cut(s)	15, 866, 895, 1509, 2881, 3052, 4125, 4486, 4690
BseGI	GGATG	6 cut(s)	732, 1596, 3372, 3725, 4096, 4607
BseJI	GATNNNNATC	2 cut(s)	407, 3096
BseMI	GCAATG	3 cut(s)	943, 1470, 2153
BseRI	GAGGAG	9 cut(s)	681, 1790, 1809, 2226, 2471, 2486, 4512, 4555, 4707
BseSI	GKGCMC	3 cut(s)	1342, 2311, 4081
BseYI	CCCAGC	1 cut(s)	4563
BsgI	GTGCAG	1 cut(s)	117
Bsh1285I	CGRYCG	1 cut(s)	4869
BshNI	GGYRCC	1 cut(s)	3988
BshVI	ATCGAT	1 cut(s)	4865
BsiEI	CGRYCG	1 cut(s)	4869
BsiHKAI	GWGCWC	5 cut(s)	1342, 3025, 3185, 4192, 4401
BsiHKCI	CYCGRG	2 cut(s)	3258, 4185
BsiSI	CCGG	3 cut(s)	35, 1111, 4372
BsiWI	CGTACG	1 cut(s)	2083
BslFI	GGGAC	2 cut(s)	2884, 4889
BsmFI	GGGAC	2 cut(s)	2884, 4889
BsmI	GAATGC	3 cut(s)	76, 1670, 2758
Bso31I	GGTCTC	3 cut(s)	751, 3476, 4135
BsoBI	CYCGRG	2 cut(s)	3258, 4185
Bsp119I	TTCGAA	2 cut(s)	2606, 3886
Bsp1286I	GDGCHC	7 cut(s)	1342, 2311, 3025, 3185, 4081, 4192, 4401
Bsp1407I	TGTACA	4 cut(s)	216, 528, 1632, 4298
Bsp19I	CCATGG	1 cut(s)	866
BspACI	CCGC	7 cut(s)	1056, 2158, 2519, 2540, 3500, 3649, 3706
BspDI	ATCGAT	1 cut(s)	4865
BspHI	TCATGA	4 cut(s)	381, 1165, 2437, 3474
BspLI	GGNNCC	6 cut(s)	597, 1005, 3010, 3990, 4009, 4877
BspMAI	CTGCAG	2 cut(s)	4237, 4573
BspMI	ACCTGC	1 cut(s)	1669
BspQI	GCTCTTC	3 cut(s)	648, 1788, 2913
BspT104I	TTCGAA	2 cut(s)	2606, 3886
BspT107I	GGYRCC	1 cut(s)	3988
BspTI	CTTAAG	1 cut(s)	2302
BspTNI	GGTCTC	3 cut(s)	751, 3476, 4135
BsrBI	CCGCTC	1 cut(s)	3649
BsrDI	GCAATG	3 cut(s)	943, 1470, 2153
BsrFI	RCCGGY	1 cut(s)	1110
BsrGI	TGTACA	4 cut(s)	216, 528, 1632, 4298
BssAI	RCCGGY	1 cut(s)	1110
BssECI	CCNNGG	9 cut(s)	15, 866, 895, 1509, 2881, 3052, 4125, 4486, 4690
BssNAI	GTATAC	1 cut(s)	2284
BssNI	GRCGYC	2 cut(s)	1970, 2580
BssT1I	CCWWGG	5 cut(s)	866, 895, 1509, 3052, 4486
Bst1107I	GTATAC	1 cut(s)	2284
Bst6I	CTCTTC	9 cut(s)	648, 1257, 1788, 2538, 2608, 2913, 3216, 4504, 4722
BstACI	GRCGYC	2 cut(s)	1970, 2580
BstAFI	CTTAAG	1 cut(s)	2302
BstAPI	GCANNNNNTGC	3 cut(s)	1748, 2657, 4460
BstAUI	TGTACA	4 cut(s)	216, 528, 1632, 4298
BstBAI	YACGTR	2 cut(s)	2087, 2835
BstBI	TTCGAA	2 cut(s)	2606, 3886
BstC8I	GCNNGC	7 cut(s)	231, 693, 1839, 2653, 3444, 3869, 4551
BstDSI	CCRYGG	1 cut(s)	866
BstEII	GGTNACC	2 cut(s)	1106, 2186
BstENI	CCTNNNNNAGG	2 cut(s)	1307, 4490
BstF5I	GGATG	6 cut(s)	732, 1596, 3372, 3725, 4096, 4607
BstH2I	RGCGCY	3 cut(s)	1274, 1771, 3274
BstHHI	GCGC	5 cut(s)	325, 1273, 1770, 3273, 4454
BstMCI	CGRYCG	1 cut(s)	4869
BstNSI	RCATGY	5 cut(s)	2796, 2866, 3127, 3871, 4891
BstPI	GGTNACC	2 cut(s)	1106, 2186
BstSFI	CTRYAG	5 cut(s)	1367, 2007, 3390, 4233, 4569
BstSLI	GKGCMC	3 cut(s)	1342, 2311, 4081
BstV2I	GAAGAC	4 cut(s)	1973, 2112, 4647, 4863
BstX2I	RGATCY	8 cut(s)	402, 512, 1003, 3082, 3290, 3734, 3955, 4749
BstXI	CCANNNNNNTGG	2 cut(s)	3720, 4532
BstYI	RGATCY	8 cut(s)	402, 512, 1003, 3082, 3290, 3734, 3955, 4749
BstZ17I	GTATAC	1 cut(s)	2284
Bsu15I	ATCGAT	1 cut(s)	4865
BsuI	GTATCC	2 cut(s)	784, 1768
BsuTUI	ATCGAT	1 cut(s)	4865
BtgI	CCRYGG	1 cut(s)	866
BtsCI	GGATG	6 cut(s)	732, 1596, 3372, 3725, 4096, 4607
BveI	ACCTGC	1 cut(s)	1669
Cac8I	GCNNGC	7 cut(s)	231, 693, 1839, 2653, 3444, 3869, 4551
CaiI	CAGNNNCTG	1 cut(s)	4592
CciI	TCATGA	4 cut(s)	381, 1165, 2437, 3474
CfoI	GCGC	5 cut(s)	325, 1273, 1770, 3273, 4454
Cfr10I	RCCGGY	1 cut(s)	1110
Cfr13I	GGNCC	7 cut(s)	959, 3009, 3198, 3256, 4438, 4483, 4876
ClaI	ATCGAT	1 cut(s)	4865
CseI	GACGC	4 cut(s)	2569, 4058, 4154, 4682
CspCI	CAANNNNNGTGG	2 cut(s)	951, 986
DraI	TTTAAA	1 cut(s)	4291
DraIII	CACNNNGTG	2 cut(s)	93, 1263
DrdI	GACNNNNNNGTC	1 cut(s)	3615
DseDI	GACNNNNNNGTC	1 cut(s)	3615
EaeI	YGGCCR	2 cut(s)	39, 4369
Eam1104I	CTCTTC	9 cut(s)	648, 1257, 1788, 2538, 2608, 2913, 3216, 4504, 4722
EarI	CTCTTC	9 cut(s)	648, 1257, 1788, 2538, 2608, 2913, 3216, 4504, 4722
Ecl136II	GAGCTC	1 cut(s)	3023
Eco130I	CCWWGG	5 cut(s)	866, 895, 1509, 3052, 4486
Eco24I	GRGCYC	1 cut(s)	3025
Eco31I	GGTCTC	3 cut(s)	751, 3476, 4135
Eco32I	GATATC	2 cut(s)	2129, 3934
Eco47I	GGWCC	4 cut(s)	3009, 4438, 4483, 4876
Eco47III	AGCGCT	1 cut(s)	3272
Eco53kI	GAGCTC	1 cut(s)	3023
Eco57I	CTGAAG	4 cut(s)	1217, 1245, 1551, 3699
Eco72I	CACGTG	1 cut(s)	2835
Eco88I	CYCGRG	2 cut(s)	3258, 4185
Eco91I	GGTNACC	2 cut(s)	1106, 2186
EcoICRI	GAGCTC	1 cut(s)	3023
EcoNI	CCTNNNNNAGG	2 cut(s)	1307, 4490
EcoO65I	GGTNACC	2 cut(s)	1106, 2186
EcoRI	GAATTC	2 cut(s)	564, 4105
EcoRV	GATATC	2 cut(s)	2129, 3934
EcoT14I	CCWWGG	5 cut(s)	866, 895, 1509, 3052, 4486
EcoT22I	ATGCAT	3 cut(s)	1489, 2351, 2758
EcoT38I	GRGCYC	1 cut(s)	3025
ErhI	CCWWGG	5 cut(s)	866, 895, 1509, 3052, 4486
FalI	AAGNNNNNCTT	4 cut(s)	164, 196, 4719, 4751
FaqI	GGGAC	2 cut(s)	2884, 4889
FauI	CCCGC	2 cut(s)	2512, 3642
FauNDI	CATATG	1 cut(s)	2875
FbaI	TGATCA	5 cut(s)	276, 378, 2569, 2590, 4738
FblI	GTMKAC	4 cut(s)	2265, 2283, 3393, 4813
FokI	GGATG	6 cut(s)	739, 1583, 3379, 3732, 4103, 4594
FriOI	GRGCYC	1 cut(s)	3025
FspBI	CTAG	8 cut(s)	110, 746, 891, 1991, 2256, 2967, 3819, 4529
GlaI	GCGC	5 cut(s)	324, 1272, 1769, 3272, 4453
GsaI	CCCAGC	1 cut(s)	4567
GsuI	CTGGAG	4 cut(s)	684, 1793, 3768, 4377
HaeII	RGCGCY	3 cut(s)	1274, 1771, 3274
HapII	CCGG	3 cut(s)	35, 1111, 4372
HgaI	GACGC	4 cut(s)	2569, 4058, 4154, 4682
HhaI	GCGC	5 cut(s)	325, 1273, 1770, 3273, 4454
Hin1I	GRCGYC	2 cut(s)	1970, 2580
Hin6I	GCGC	5 cut(s)	323, 1271, 1768, 3271, 4452
HinP1I	GCGC	5 cut(s)	323, 1271, 1768, 3271, 4452
HincII	GTYRAC	2 cut(s)	1122, 4169
HindII	GTYRAC	2 cut(s)	1122, 4169
HindIII	AAGCTT	1 cut(s)	4477
HpaII	CCGG	3 cut(s)	35, 1111, 4372
HphI	GGTGA	9 cut(s)	109, 1970, 2198, 2216, 2461, 2944, 3277, 3430, 4826
HpyCH4IV	ACGT	5 cut(s)	1420, 1970, 2086, 2286, 2834
HpySE526I	ACGT	5 cut(s)	1420, 1970, 2086, 2286, 2834
Hsp92I	GRCGYC	2 cut(s)	1970, 2580
HspAI	GCGC	5 cut(s)	323, 1271, 1768, 3271, 4452
Ksp22I	TGATCA	5 cut(s)	276, 378, 2569, 2590, 4738
LguI	GCTCTTC	3 cut(s)	648, 1788, 2913
LmnI	GCTCC	8 cut(s)	799, 1568, 1929, 1996, 2473, 3028, 3115, 3688
MaeI	CTAG	8 cut(s)	110, 746, 891, 1991, 2256, 2967, 3819, 4529
MaeII	ACGT	5 cut(s)	1420, 1970, 2086, 2286, 2834
MbiI	CCGCTC	1 cut(s)	3649
MfeI	CAATTG	2 cut(s)	633, 2139
MflI	RGATCY	8 cut(s)	402, 512, 1003, 3082, 3290, 3734, 3955, 4749
MhlI	GDGCHC	7 cut(s)	1342, 2311, 3025, 3185, 4081, 4192, 4401
MlsI	TGGCCA	1 cut(s)	41
MluNI	TGGCCA	1 cut(s)	41
MmeI	TCCRAC	5 cut(s)	2505, 3811, 3820, 4138, 4611
Mox20I	TGGCCA	1 cut(s)	41
Mph1103I	ATGCAT	3 cut(s)	1489, 2351, 2758
MroXI	GAANNNNTTC	5 cut(s)	179, 500, 657, 1230, 1859
MscI	TGGCCA	1 cut(s)	41
MslI	CAYNNNNRTG	2 cut(s)	3416, 3718
Msp20I	TGGCCA	1 cut(s)	41
MspA1I	CMGCKG	3 cut(s)	1058, 4238, 4574
MspCI	CTTAAG	1 cut(s)	2302
MspI	CCGG	3 cut(s)	35, 1111, 4372
MunI	CAATTG	2 cut(s)	633, 2139
Mva1269I	GAATGC	3 cut(s)	76, 1670, 2758
NciI	CCSGG	2 cut(s)	35, 4373
NcoI	CCATGG	1 cut(s)	866
NdeI	CATATG	1 cut(s)	2875
NlaIV	GGNNCC	6 cut(s)	597, 1005, 3010, 3990, 4009, 4877
NmeAIII	GCCGAG	2 cut(s)	283, 4150
NsiI	ATGCAT	3 cut(s)	1489, 2351, 2758
NspI	RCATGY	5 cut(s)	2796, 2866, 3127, 3871, 4891
NspV	TTCGAA	2 cut(s)	2606, 3886
OliI	CACNNNNGTG	1 cut(s)	3416
PaeI	GCATGC	1 cut(s)	3871
PaeR7I	CTCGAG	1 cut(s)	4185
PagI	TCATGA	4 cut(s)	381, 1165, 2437, 3474
PaqCI	CACCTGC	1 cut(s)	1669
PciI	ACATGT	2 cut(s)	3123, 4887
PciSI	GCTCTTC	3 cut(s)	648, 1788, 2913
PctI	GAATGC	3 cut(s)	76, 1670, 2758
PdmI	GAANNNNTTC	5 cut(s)	179, 500, 657, 1230, 1859
Pfl23II	CGTACG	1 cut(s)	2083
PflFI	GACNNNGTC	2 cut(s)	3827, 4164
PflMI	CCANNNNNTGG	2 cut(s)	605, 1315
PfoI	TCCNGGA	1 cut(s)	661
Ple19I	CGATCG	1 cut(s)	4869
PmaCI	CACGTG	1 cut(s)	2835
PmlI	CACGTG	1 cut(s)	2835
Ppu21I	YACGTR	2 cut(s)	2087, 2835
PscI	ACATGT	2 cut(s)	3123, 4887
PshBI	ATTAAT	3 cut(s)	1908, 3167, 3378
Psp124BI	GAGCTC	1 cut(s)	3025
PspCI	CACGTG	1 cut(s)	2835
PspEI	GGTNACC	2 cut(s)	1106, 2186
PspFI	CCCAGC	1 cut(s)	4563
PspLI	CGTACG	1 cut(s)	2083
PspN4I	GGNNCC	6 cut(s)	597, 1005, 3010, 3990, 4009, 4877
PspPI	GGNCC	7 cut(s)	959, 3009, 3198, 3256, 4438, 4483, 4876
PspXI	VCTCGAGB	1 cut(s)	4185
PstI	CTGCAG	2 cut(s)	4237, 4573
PstNI	CAGNNNCTG	1 cut(s)	4592
PsuI	RGATCY	8 cut(s)	402, 512, 1003, 3082, 3290, 3734, 3955, 4749
PsyI	GACNNNGTC	2 cut(s)	3827, 4164
PvuI	CGATCG	1 cut(s)	4869
PvuII	CAGCTG	2 cut(s)	4238, 4574
RseI	CAYNNNNRTG	2 cut(s)	3416, 3718
SacI	GAGCTC	1 cut(s)	3025
SapI	GCTCTTC	3 cut(s)	648, 1788, 2913
Sau96I	GGNCC	7 cut(s)	959, 3009, 3198, 3256, 4438, 4483, 4876
ScaI	AGTACT	2 cut(s)	1833, 1954
SduI	GDGCHC	7 cut(s)	1342, 2311, 3025, 3185, 4081, 4192, 4401
SfcI	CTRYAG	5 cut(s)	1367, 2007, 3390, 4233, 4569
Sfr274I	CTCGAG	1 cut(s)	4185
SfuI	TTCGAA	2 cut(s)	2606, 3886
SinI	GGWCC	4 cut(s)	3009, 4438, 4483, 4876
SlaI	CTCGAG	1 cut(s)	4185
SmiI	ATTTAAAT	1 cut(s)	4291
SmiMI	CAYNNNNRTG	2 cut(s)	3416, 3718
SmlI	CTYRAG	4 cut(s)	706, 2302, 4185, 4753
SmoI	CTYRAG	4 cut(s)	706, 2302, 4185, 4753
SphI	GCATGC	1 cut(s)	3871
SsiI	CCGC	7 cut(s)	1056, 2158, 2519, 2540, 3500, 3649, 3706
SspI	AATATT	6 cut(s)	717, 1041, 1906, 2221, 3580, 4469
SspMI	CTAG	8 cut(s)	110, 746, 891, 1991, 2256, 2967, 3819, 4529
SstI	GAGCTC	1 cut(s)	3025
StyI	CCWWGG	5 cut(s)	866, 895, 1509, 3052, 4486
SwaI	ATTTAAAT	1 cut(s)	4291
TaiI	ACGT	5 cut(s)	1423, 1973, 2089, 2289, 2837
TaqII	GACCGA	1 cut(s)	4362
TatI	WGTACW	7 cut(s)	216, 251, 528, 1632, 1831, 1952, 4298
TauI	GCSGC	1 cut(s)	2161
TspGWI	ACGGA	5 cut(s)	81, 782, 1027, 3440, 3976
Tth111I	GACNNNGTC	2 cut(s)	3827, 4164
Van91I	CCANNNNNTGG	2 cut(s)	605, 1315
Vha464I	CTTAAG	1 cut(s)	2302
VneI	GTGCAC	1 cut(s)	1338
VpaK11BI	GGWCC	4 cut(s)	3009, 4438, 4483, 4876
VspI	ATTAAT	3 cut(s)	1908, 3167, 3378
XagI	CCTNNNNNAGG	2 cut(s)	1307, 4490
XapI	RAATTY	9 cut(s)	285, 298, 564, 589, 1452, 3912, 4105, 4147, 4286
XceI	RCATGY	5 cut(s)	2796, 2866, 3127, 3871, 4891
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2061, 4844
XhoI	CTCGAG	1 cut(s)	4185
XmiI	GTMKAC	4 cut(s)	2265, 2283, 3393, 4813
XmnI	GAANNNNTTC	5 cut(s)	179, 500, 657, 1230, 1859
XspI	CTAG	8 cut(s)	110, 746, 891, 1991, 2256, 2967, 3819, 4529
ZraI	GACGTC	1 cut(s)	1971
ZrmI	AGTACT	2 cut(s)	1833, 1954
Zsp2I	ATGCAT	3 cut(s)	1489, 2351, 2758

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.