EF-hand domain pair
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g16570 |
| malus_domestica | MD10G1139000.v1.1 |
| prunus_persica | Prupe.8G177800_v2.0.a1 |
| pyrus_communis | pycom10g11820 |
| rosa_chinensis | RchiOBHm_Chr6g0280641 |
| rosa_laevigata | RLG00000013041 |
| rosa_multiflora | Rmu_sc0000976.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00187850 |
| rosa_rugosa | Rorug06G0133300 Rorug06G0133300 Rorug06G0133300 |
| rosa_samantha | Rh6AG245700 Rh6BG248100 Rh6CG249500 Rh6DG240800 |
| rosa_wichuraiana | Rw6G021270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 11 |
| AfeI | AGCGCT | 2 cut(s) | 88, 195 |
| AgsI | TTSAA | 3 cut(s) | 182, 221, 427 |
| AluBI | AGCT | 5 cut(s) | 79, 177, 227, 342, 443 |
| AluI | AGCT | 5 cut(s) | 79, 177, 227, 342, 443 |
| Ama87I | CYCGRG | 2 cut(s) | 36, 107 |
| Aor51HI | AGCGCT | 2 cut(s) | 88, 195 |
| AspLEI | GCGC | 2 cut(s) | 89, 196 |
| AvaI | CYCGRG | 2 cut(s) | 36, 107 |
| BaeGI | GKGCMC | 1 cut(s) | 73 |
| BbvCI | CCTCAGC | 1 cut(s) | 75 |
| BceAI | ACGGC | 1 cut(s) | 80 |
| BclI | TGATCA | 2 cut(s) | 138, 346 |
| BfoI | RGCGCY | 2 cut(s) | 90, 197 |
| BlpI | GCTNAGC | 1 cut(s) | 444 |
| BmeT110I | CYCGRG | 2 cut(s) | 36, 107 |
| BmiI | GGNNCC | 1 cut(s) | 169 |
| BmsI | GCATC | 1 cut(s) | 72 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 445, 477 |
| Bpu10I | CCTNAGC | 1 cut(s) | 75 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 444 |
| BpuEI | CTTGAG | 1 cut(s) | 65 |
| BsaWI | WCCGGW | 1 cut(s) | 56 |
| BseGI | GGATG | 1 cut(s) | 150 |
| BseMII | CTCAG | 3 cut(s) | 11, 89, 135 |
| BseSI | GKGCMC | 1 cut(s) | 73 |
| BsgI | GTGCAG | 1 cut(s) | 425 |
| Bsh1236I | CGCG | 1 cut(s) | 11 |
| BsiHKCI | CYCGRG | 2 cut(s) | 36, 107 |
| BsiSI | CCGG | 1 cut(s) | 57 |
| BsoBI | CYCGRG | 2 cut(s) | 36, 107 |
| Bsp1286I | GDGCHC | 1 cut(s) | 73 |
| Bsp143I | GATC | 3 cut(s) | 138, 346, 466 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 444 |
| BspCNI | CTCAG | 3 cut(s) | 12, 88, 134 |
| BspFNI | CGCG | 1 cut(s) | 11 |
| BspLI | GGNNCC | 1 cut(s) | 169 |
| BssMI | GATC | 3 cut(s) | 138, 346, 466 |
| Bst4CI | ACNGT | 1 cut(s) | 331 |
| Bst6I | CTCTTC | 1 cut(s) | 177 |
| BstDEI | CTNAG | 4 cut(s) | 20, 75, 121, 444 |
| BstF5I | GGATG | 1 cut(s) | 150 |
| BstFNI | CGCG | 1 cut(s) | 11 |
| BstH2I | RGCGCY | 2 cut(s) | 90, 197 |
| BstHHI | GCGC | 2 cut(s) | 89, 196 |
| BstKTI | GATC | 3 cut(s) | 141, 349, 469 |
| BstMBI | GATC | 3 cut(s) | 138, 346, 466 |
| BstSLI | GKGCMC | 1 cut(s) | 73 |
| BstUI | CGCG | 1 cut(s) | 11 |
| BtsCI | GGATG | 1 cut(s) | 150 |
| BtsI | GCAGTG | 1 cut(s) | 489 |
| BtsIMutI | CAGTG | 2 cut(s) | 73, 489 |
| CfoI | GCGC | 2 cut(s) | 89, 196 |
| CviAII | CATG | 1 cut(s) | 172 |
| CviJI | RGCY | 6 cut(s) | 79, 177, 227, 255, 342, 443 |
| CviKI_1 | RGCY | 6 cut(s) | 79, 177, 227, 255, 342, 443 |
| DdeI | CTNAG | 4 cut(s) | 20, 75, 121, 444 |
| DpnI | GATC | 3 cut(s) | 140, 348, 468 |
| DpnII | GATC | 3 cut(s) | 138, 346, 466 |
| Eam1104I | CTCTTC | 1 cut(s) | 177 |
| EarI | CTCTTC | 1 cut(s) | 177 |
| Eco47III | AGCGCT | 2 cut(s) | 88, 195 |
| Eco88I | CYCGRG | 2 cut(s) | 36, 107 |
| FaeI | CATG | 1 cut(s) | 175 |
| FaiI | YATR | 6 cut(s) | 150, 173, 279, 386, 398, 508 |
| FatI | CATG | 1 cut(s) | 171 |
| FbaI | TGATCA | 2 cut(s) | 138, 346 |
| FokI | GGATG | 1 cut(s) | 157 |
| GlaI | GCGC | 2 cut(s) | 88, 195 |
| HaeII | RGCGCY | 2 cut(s) | 90, 197 |
| HapII | CCGG | 1 cut(s) | 57 |
| HhaI | GCGC | 2 cut(s) | 89, 196 |
| Hin1II | CATG | 1 cut(s) | 175 |
| Hin6I | GCGC | 2 cut(s) | 87, 194 |
| HinP1I | GCGC | 2 cut(s) | 87, 194 |
| HincII | GTYRAC | 1 cut(s) | 43 |
| HindII | GTYRAC | 1 cut(s) | 43 |
| HindIII | AAGCTT | 1 cut(s) | 225 |
| HinfI | GANTC | 3 cut(s) | 44, 311, 460 |
| HpaII | CCGG | 1 cut(s) | 57 |
| Hpy166II | GTNNAC | 1 cut(s) | 43 |
| Hpy188I | TCNGA | 4 cut(s) | 21, 49, 235, 371 |
| Hpy188III | TCNNGA | 5 cut(s) | 82, 107, 142, 266, 464 |
| Hpy8I | GTNNAC | 1 cut(s) | 43 |
| HpyCH4III | ACNGT | 1 cut(s) | 331 |
| HpyCH4V | TGCA | 3 cut(s) | 406, 489, 501 |
| HpyF3I | CTNAG | 4 cut(s) | 20, 75, 121, 444 |
| Hsp92II | CATG | 1 cut(s) | 175 |
| HspAI | GCGC | 2 cut(s) | 87, 194 |
| Ksp22I | TGATCA | 2 cut(s) | 138, 346 |
| Kzo9I | GATC | 3 cut(s) | 138, 346, 466 |
| LpnPI | CCDG | 5 cut(s) | 70, 127, 279, 293, 330 |
| LweI | GCATC | 1 cut(s) | 72 |
| MaeIII | GTNAC | 1 cut(s) | 457 |
| MalI | GATC | 3 cut(s) | 140, 348, 468 |
| MboI | GATC | 3 cut(s) | 138, 346, 466 |
| MboII | GAAGA | 2 cut(s) | 194, 367 |
| MfeI | CAATTG | 1 cut(s) | 496 |
| MhlI | GDGCHC | 1 cut(s) | 73 |
| MluCI | AATT | 4 cut(s) | 294, 427, 476, 496 |
| MlyI | GAGTC | 3 cut(s) | 38, 305, 454 |
| MmeI | TCCRAC | 2 cut(s) | 79, 394 |
| MnlI | CCTC | 4 cut(s) | 84, 126, 237, 274 |
| MspI | CCGG | 1 cut(s) | 57 |
| MunI | CAATTG | 1 cut(s) | 496 |
| MvnI | CGCG | 1 cut(s) | 11 |
| NdeII | GATC | 3 cut(s) | 138, 346, 466 |
| NlaIII | CATG | 1 cut(s) | 175 |
| NlaIV | GGNNCC | 1 cut(s) | 169 |
| NmuCI | GTSAC | 1 cut(s) | 457 |
| PaeR7I | CTCGAG | 1 cut(s) | 107 |
| PleI | GAGTC | 3 cut(s) | 38, 305, 454 |
| PpsI | GAGTC | 3 cut(s) | 38, 305, 454 |
| PspN4I | GGNNCC | 1 cut(s) | 169 |
| Sau3AI | GATC | 3 cut(s) | 138, 346, 466 |
| SchI | GAGTC | 3 cut(s) | 38, 305, 454 |
| SduI | GDGCHC | 1 cut(s) | 73 |
| SetI | ASST | 6 cut(s) | 81, 179, 219, 229, 344, 445 |
| SfaNI | GCATC | 1 cut(s) | 72 |
| Sfr274I | CTCGAG | 1 cut(s) | 107 |
| SlaI | CTCGAG | 1 cut(s) | 107 |
| SmlI | CTYRAG | 2 cut(s) | 80, 107 |
| SmoI | CTYRAG | 2 cut(s) | 80, 107 |
| Sse9I | AATT | 4 cut(s) | 294, 427, 476, 496 |
| TaaI | ACNGT | 1 cut(s) | 331 |
| TaqI | TCGA | 1 cut(s) | 108 |
| TasI | AATT | 4 cut(s) | 294, 427, 476, 496 |
| TscAI | CASTG | 2 cut(s) | 73, 496 |
| TseFI | GTSAC | 1 cut(s) | 457 |
| Tsp45I | GTSAC | 1 cut(s) | 457 |
| TspDTI | ATGAA | 2 cut(s) | 373, 420 |
| TspRI | CASTG | 2 cut(s) | 73, 496 |
| XhoI | CTCGAG | 1 cut(s) | 107 |