EF-hand domain pair
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g16570 |
| malus_domestica | MD10G1139000.v1.1 |
| prunus_persica | Prupe.8G177800_v2.0.a1 |
| pyrus_communis | pycom10g11820 |
| rosa_chinensis | RchiOBHm_Chr6g0280641 |
| rosa_laevigata | RLG00000013041 |
| rosa_multiflora | Rmu_sc0000976.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00187850 |
| rosa_rugosa | Rorug06G0133300 Rorug06G0133300 Rorug06G0133300 |
| rosa_samantha | Rh6AG245700 Rh6BG248100 Rh6CG249500 Rh6DG240800 |
| rosa_wichuraiana | Rw6G021270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 3 cut(s) | 11, 35, 37 |
| AcsI | RAATTY | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 214 |
| AgsI | TTSAA | 2 cut(s) | 182, 221 |
| AjnI | CCWGG | 1 cut(s) | 306 |
| AluBI | AGCT | 5 cut(s) | 79, 177, 227, 342, 377 |
| AluI | AGCT | 5 cut(s) | 79, 177, 227, 342, 377 |
| ApoI | RAATTY | 1 cut(s) | 110 |
| AspLEI | GCGC | 2 cut(s) | 37, 196 |
| BbvCI | CCTCAGC | 1 cut(s) | 75 |
| BceAI | ACGGC | 1 cut(s) | 80 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 395 |
| BciT130I | CCWGG | 1 cut(s) | 308 |
| BclI | TGATCA | 2 cut(s) | 138, 346 |
| BfaI | CTAG | 1 cut(s) | 374 |
| Bme1390I | CCNGG | 1 cut(s) | 308 |
| BmrFI | CCNGG | 1 cut(s) | 308 |
| BmsI | GCATC | 1 cut(s) | 72 |
| Bpu10I | CCTNAGC | 1 cut(s) | 75 |
| BpuEI | CTTGAG | 1 cut(s) | 65 |
| BsaWI | WCCGGW | 1 cut(s) | 56 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 214 |
| BseBI | CCWGG | 1 cut(s) | 308 |
| BseGI | GGATG | 1 cut(s) | 150 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 214 |
| BseMII | CTCAG | 4 cut(s) | 34, 60, 89, 246 |
| Bsh1236I | CGCG | 3 cut(s) | 11, 35, 37 |
| BsiSI | CCGG | 1 cut(s) | 57 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 214 |
| BsmI | GAATGC | 1 cut(s) | 91 |
| Bsp143I | GATC | 2 cut(s) | 138, 346 |
| BspCNI | CTCAG | 4 cut(s) | 33, 59, 88, 245 |
| BspFNI | CGCG | 3 cut(s) | 11, 35, 37 |
| BssMI | GATC | 2 cut(s) | 138, 346 |
| Bst2UI | CCWGG | 1 cut(s) | 308 |
| Bst4CI | ACNGT | 1 cut(s) | 331 |
| Bst6I | CTCTTC | 2 cut(s) | 21, 177 |
| BstDEI | CTNAG | 4 cut(s) | 20, 46, 75, 232 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 212 |
| BstF5I | GGATG | 1 cut(s) | 150 |
| BstFNI | CGCG | 3 cut(s) | 11, 35, 37 |
| BstHHI | GCGC | 2 cut(s) | 37, 196 |
| BstKTI | GATC | 2 cut(s) | 141, 349 |
| BstMBI | GATC | 2 cut(s) | 138, 346 |
| BstNI | CCWGG | 1 cut(s) | 308 |
| BstSCI | CCNGG | 1 cut(s) | 306 |
| BstUI | CGCG | 3 cut(s) | 11, 35, 37 |
| BtsCI | GGATG | 1 cut(s) | 150 |
| BtsI | GCAGTG | 1 cut(s) | 66 |
| BtsIMutI | CAGTG | 1 cut(s) | 66 |
| CfoI | GCGC | 2 cut(s) | 37, 196 |
| CviJI | RGCY | 6 cut(s) | 79, 177, 227, 255, 342, 377 |
| CviKI_1 | RGCY | 6 cut(s) | 79, 177, 227, 255, 342, 377 |
| DdeI | CTNAG | 4 cut(s) | 20, 46, 75, 232 |
| DpnI | GATC | 2 cut(s) | 140, 348 |
| DpnII | GATC | 2 cut(s) | 138, 346 |
| Eam1104I | CTCTTC | 2 cut(s) | 21, 177 |
| EarI | CTCTTC | 2 cut(s) | 21, 177 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 212 |
| EcoRI | GAATTC | 1 cut(s) | 110 |
| EcoRII | CCWGG | 1 cut(s) | 306 |
| FaiI | YATR | 5 cut(s) | 150, 173, 279, 386, 398 |
| FbaI | TGATCA | 2 cut(s) | 138, 346 |
| FokI | GGATG | 1 cut(s) | 157 |
| FspBI | CTAG | 1 cut(s) | 374 |
| GlaI | GCGC | 2 cut(s) | 36, 195 |
| HapII | CCGG | 1 cut(s) | 57 |
| HhaI | GCGC | 2 cut(s) | 37, 196 |
| Hin6I | GCGC | 2 cut(s) | 35, 194 |
| HinP1I | GCGC | 2 cut(s) | 35, 194 |
| HincII | GTYRAC | 1 cut(s) | 43 |
| HindII | GTYRAC | 1 cut(s) | 43 |
| HindIII | AAGCTT | 1 cut(s) | 225 |
| HinfI | GANTC | 3 cut(s) | 13, 44, 311 |
| HpaII | CCGG | 1 cut(s) | 57 |
| Hpy166II | GTNNAC | 1 cut(s) | 43 |
| Hpy188I | TCNGA | 4 cut(s) | 23, 49, 235, 371 |
| Hpy188III | TCNNGA | 3 cut(s) | 82, 142, 266 |
| Hpy8I | GTNNAC | 1 cut(s) | 43 |
| HpyCH4III | ACNGT | 1 cut(s) | 331 |
| HpyCH4V | TGCA | 1 cut(s) | 406 |
| HpyF3I | CTNAG | 4 cut(s) | 20, 46, 75, 232 |
| HspAI | GCGC | 2 cut(s) | 35, 194 |
| Ksp22I | TGATCA | 2 cut(s) | 138, 346 |
| Kzo9I | GATC | 2 cut(s) | 138, 346 |
| LpnPI | CCDG | 6 cut(s) | 70, 127, 279, 293, 320, 330 |
| LweI | GCATC | 1 cut(s) | 72 |
| MaeI | CTAG | 1 cut(s) | 374 |
| MalI | GATC | 2 cut(s) | 140, 348 |
| MboI | GATC | 2 cut(s) | 138, 346 |
| MboII | GAAGA | 4 cut(s) | 8, 194, 295, 367 |
| MfeI | CAATTG | 1 cut(s) | 123 |
| MluCI | AATT | 3 cut(s) | 110, 123, 294 |
| MlyI | GAGTC | 3 cut(s) | 7, 38, 305 |
| MmeI | TCCRAC | 2 cut(s) | 79, 394 |
| MnlI | CCTC | 5 cut(s) | 84, 116, 126, 237, 274 |
| MspI | CCGG | 1 cut(s) | 57 |
| MspR9I | CCNGG | 1 cut(s) | 308 |
| MunI | CAATTG | 1 cut(s) | 123 |
| Mva1269I | GAATGC | 1 cut(s) | 91 |
| MvaI | CCWGG | 1 cut(s) | 308 |
| MvnI | CGCG | 3 cut(s) | 11, 35, 37 |
| NdeII | GATC | 2 cut(s) | 138, 346 |
| PctI | GAATGC | 1 cut(s) | 91 |
| PfoI | TCCNGGA | 1 cut(s) | 306 |
| PleI | GAGTC | 3 cut(s) | 7, 38, 305 |
| PpsI | GAGTC | 3 cut(s) | 7, 38, 305 |
| Psp6I | CCWGG | 1 cut(s) | 306 |
| PspGI | CCWGG | 1 cut(s) | 306 |
| Sau3AI | GATC | 2 cut(s) | 138, 346 |
| SchI | GAGTC | 3 cut(s) | 7, 38, 305 |
| ScrFI | CCNGG | 1 cut(s) | 308 |
| SetI | ASST | 7 cut(s) | 81, 108, 179, 219, 229, 344, 379 |
| SfaNI | GCATC | 1 cut(s) | 72 |
| SmlI | CTYRAG | 1 cut(s) | 80 |
| SmoI | CTYRAG | 1 cut(s) | 80 |
| Sse9I | AATT | 3 cut(s) | 110, 123, 294 |
| SspMI | CTAG | 1 cut(s) | 374 |
| StyD4I | CCNGG | 1 cut(s) | 306 |
| TaaI | ACNGT | 1 cut(s) | 331 |
| TaqI | TCGA | 1 cut(s) | 108 |
| TasI | AATT | 3 cut(s) | 110, 123, 294 |
| TscAI | CASTG | 1 cut(s) | 73 |
| TspDTI | ATGAA | 1 cut(s) | 373 |
| TspRI | CASTG | 1 cut(s) | 73 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 212 |
| XapI | RAATTY | 1 cut(s) | 110 |
| XspI | CTAG | 1 cut(s) | 374 |