A Receptor for Ubiquitination Targets
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g19900 FvH4_2g19920 |
| prunus_persica | Prupe.1G510400_v2.0.a1 |
| pyrus_communis | pycom05g29490 |
| rosa_chinensis | RchiOBHm_Chr6g0285591 |
| rosa_laevigata | RLG00000012624 |
| rosa_multiflora | Rmu_co8292461.1_g000001 Rmu_sc0017770.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00182920 |
| rosa_rugosa | Rorug06G0175900 |
| rosa_samantha | Rh6BG288600 Rh6BG288700 Rh6CG289800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 39 |
| AclWI | GGATC | 1 cut(s) | 119 |
| AcoI | YGGCCR | 1 cut(s) | 269 |
| AluBI | AGCT | 1 cut(s) | 208 |
| AluI | AGCT | 1 cut(s) | 208 |
| AlwI | GGATC | 1 cut(s) | 119 |
| AoxI | GGCC | 1 cut(s) | 269 |
| ApeKI | GCWGC | 1 cut(s) | 240 |
| AsuII | TTCGAA | 1 cut(s) | 187 |
| BbvI | GCAGC | 1 cut(s) | 227 |
| BccI | CCATC | 1 cut(s) | 230 |
| BciVI | GTATCC | 1 cut(s) | 120 |
| BfaI | CTAG | 1 cut(s) | 285 |
| BfmI | CTRYAG | 1 cut(s) | 54 |
| BfuI | GTATCC | 1 cut(s) | 120 |
| BisI | GCNGC | 1 cut(s) | 241 |
| BlsI | GCNGC | 1 cut(s) | 242 |
| BmsI | GCATC | 1 cut(s) | 60 |
| Bpu14I | TTCGAA | 1 cut(s) | 187 |
| BsaAI | YACGTR | 1 cut(s) | 43 |
| BsaBI | GATNNNNATC | 1 cut(s) | 108 |
| BsaJI | CCNNGG | 2 cut(s) | 18, 263 |
| Bse1I | ACTGG | 2 cut(s) | 92, 278 |
| Bse8I | GATNNNNATC | 1 cut(s) | 108 |
| BseDI | CCNNGG | 2 cut(s) | 18, 263 |
| BseJI | GATNNNNATC | 1 cut(s) | 108 |
| BseNI | ACTGG | 2 cut(s) | 92, 278 |
| BseXI | GCAGC | 1 cut(s) | 227 |
| BshFI | GGCC | 1 cut(s) | 271 |
| BslFI | GGGAC | 1 cut(s) | 98 |
| BsmFI | GGGAC | 1 cut(s) | 98 |
| BsnI | GGCC | 1 cut(s) | 271 |
| Bsp119I | TTCGAA | 1 cut(s) | 187 |
| Bsp143I | GATC | 1 cut(s) | 124 |
| Bsp19I | CCATGG | 1 cut(s) | 263 |
| BspANI | GGCC | 1 cut(s) | 271 |
| BspPI | GGATC | 1 cut(s) | 119 |
| BspT104I | TTCGAA | 1 cut(s) | 187 |
| BsrI | ACTGG | 2 cut(s) | 92, 278 |
| BssECI | CCNNGG | 2 cut(s) | 18, 263 |
| BssMI | GATC | 1 cut(s) | 124 |
| BssT1I | CCWWGG | 2 cut(s) | 18, 263 |
| BstBAI | YACGTR | 1 cut(s) | 43 |
| BstBI | TTCGAA | 1 cut(s) | 187 |
| BstC8I | GCNNGC | 1 cut(s) | 313 |
| BstDSI | CCRYGG | 1 cut(s) | 263 |
| BstKTI | GATC | 1 cut(s) | 127 |
| BstMBI | GATC | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 312 |
| BstSFI | CTRYAG | 1 cut(s) | 54 |
| BstSNI | TACGTA | 1 cut(s) | 43 |
| BstV1I | GCAGC | 1 cut(s) | 227 |
| BsuI | GTATCC | 1 cut(s) | 120 |
| BsuRI | GGCC | 1 cut(s) | 271 |
| BtgI | CCRYGG | 1 cut(s) | 263 |
| Cac8I | GCNNGC | 1 cut(s) | 313 |
| CviAII | CATG | 3 cut(s) | 264, 303, 307 |
| CviJI | RGCY | 7 cut(s) | 119, 208, 240, 271, 298, 311, 333 |
| CviKI_1 | RGCY | 7 cut(s) | 119, 208, 240, 271, 298, 311, 333 |
| DpnI | GATC | 1 cut(s) | 126 |
| DpnII | GATC | 1 cut(s) | 124 |
| EaeI | YGGCCR | 1 cut(s) | 269 |
| Eco105I | TACGTA | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 2 cut(s) | 18, 263 |
| EcoT14I | CCWWGG | 2 cut(s) | 18, 263 |
| EcoT22I | ATGCAT | 1 cut(s) | 308 |
| ErhI | CCWWGG | 2 cut(s) | 18, 263 |
| FaeI | CATG | 3 cut(s) | 267, 306, 310 |
| FaiI | YATR | 4 cut(s) | 78, 265, 304, 308 |
| FaqI | GGGAC | 1 cut(s) | 98 |
| FatI | CATG | 3 cut(s) | 263, 302, 306 |
| FblI | GTMKAC | 1 cut(s) | 39 |
| Fnu4HI | GCNGC | 1 cut(s) | 241 |
| Fsp4HI | GCNGC | 1 cut(s) | 241 |
| FspBI | CTAG | 1 cut(s) | 285 |
| GluI | GCNGC | 1 cut(s) | 241 |
| HaeIII | GGCC | 1 cut(s) | 271 |
| Hin1II | CATG | 3 cut(s) | 267, 306, 310 |
| HincII | GTYRAC | 2 cut(s) | 160, 322 |
| HindII | GTYRAC | 2 cut(s) | 160, 322 |
| Hpy166II | GTNNAC | 3 cut(s) | 40, 160, 322 |
| Hpy188III | TCNNGA | 1 cut(s) | 152 |
| Hpy8I | GTNNAC | 3 cut(s) | 40, 160, 322 |
| Hpy99I | CGWCG | 1 cut(s) | 227 |
| HpyAV | CCTTC | 1 cut(s) | 309 |
| HpyCH4IV | ACGT | 2 cut(s) | 42, 225 |
| HpyCH4V | TGCA | 3 cut(s) | 73, 180, 306 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 312 |
| HpySE526I | ACGT | 2 cut(s) | 42, 225 |
| Hsp92II | CATG | 3 cut(s) | 267, 306, 310 |
| Kzo9I | GATC | 1 cut(s) | 124 |
| LpnPI | CCDG | 4 cut(s) | 42, 73, 188, 291 |
| Lsp1109I | GCAGC | 1 cut(s) | 227 |
| LweI | GCATC | 1 cut(s) | 60 |
| MaeI | CTAG | 1 cut(s) | 285 |
| MaeII | ACGT | 2 cut(s) | 42, 225 |
| MaeIII | GTNAC | 1 cut(s) | 49 |
| MalI | GATC | 1 cut(s) | 126 |
| MboI | GATC | 1 cut(s) | 124 |
| MboII | GAAGA | 2 cut(s) | 107, 176 |
| MnlI | CCTC | 1 cut(s) | 25 |
| Mph1103I | ATGCAT | 1 cut(s) | 308 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 312 |
| NcoI | CCATGG | 1 cut(s) | 263 |
| NdeII | GATC | 1 cut(s) | 124 |
| NlaIII | CATG | 3 cut(s) | 267, 306, 310 |
| NsiI | ATGCAT | 1 cut(s) | 308 |
| NspV | TTCGAA | 1 cut(s) | 187 |
| PkrI | GCNGC | 1 cut(s) | 242 |
| Ppu21I | YACGTR | 1 cut(s) | 43 |
| SatI | GCNGC | 1 cut(s) | 241 |
| Sau3AI | GATC | 1 cut(s) | 124 |
| SetI | ASST | 3 cut(s) | 45, 210, 228 |
| SfaNI | GCATC | 1 cut(s) | 60 |
| SfcI | CTRYAG | 1 cut(s) | 54 |
| SfuI | TTCGAA | 1 cut(s) | 187 |
| SnaBI | TACGTA | 1 cut(s) | 43 |
| SspMI | CTAG | 1 cut(s) | 285 |
| StyI | CCWWGG | 2 cut(s) | 18, 263 |
| TaiI | ACGT | 2 cut(s) | 45, 228 |
| TaqI | TCGA | 1 cut(s) | 187 |
| TseI | GCWGC | 1 cut(s) | 240 |
| TspDTI | ATGAA | 3 cut(s) | 108, 218, 291 |
| TspGWI | ACGGA | 1 cut(s) | 102 |
| XmiI | GTMKAC | 1 cut(s) | 39 |
| XspI | CTAG | 1 cut(s) | 285 |
| Zsp2I | ATGCAT | 1 cut(s) | 308 |