FvH4_2g23940

CSC1-like protein At4g02900

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0010682
Physical Location & Seq
Forward (+)
19563552 .. 19568848
5297 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g23940.t2

Sequence Viewer

Length: 1860 bp
ATGATCATACTTTGCCAAACATGGAACTTTTTAATGTTTTCTAGGTTCATTGCACATCTCATATTGTCTTATCTATTCACATTTTGGACGTGCTTTGTCTTGTACTTCGAGTACAAGAGAATGGCTACTAAAAGGCTTCAATTTTTAGCATCTCAATCACGCCGTGCAGATCAATTTTCGGTTCTTGTGAGAAATGTACCCCCAGATCCTGATGAGTCAGTCAGCGAGCATGTCGAACACTTCTTTTGTGTGAACCATCCCGATCATTATCTTACACATCAAGTTGTATATAATGCAAACAAACTTGCTAGGTTGGTTGCAAAGAAGAAGAGTTTGAAAAATAGGCTTGTGTACTACCAGAATAAGTATGAGAGACATCCTAAGAGATTAAGGCCTACTACAAAGACAGGTTTATTGGGTCTGTTGGGAGACAAAGTGGATGCAATTAATTACTACAAATCTGAGATTGAGAAGTTGAACGAAGAAGAGAAAAAAGAAAGAGAAAGAGTTGCAAGTGATCCTGCAGCGATAATGCCAGCAGCATTTGTTTCATTCAAATCGCGATGGGGAGCAGCTGTATGTGCTCAAACTCAGCAGTCGAGTAATGCTACCATCTGGTTGACAGAGTGGGCTCCCGAGCCACGTGACGTGTATTGGAGAAATCTTGCAATTCCATATGTTGAACTCAATGTGCGAAAACTGTTCATGGCTGTTGCTTTCTTTCTTCTCATTTTCTTTTTTATGATTCCAATAGCATTCGTCCAATCTCTAGCCAACATTGAGAAGATTGAGAAGGCCCTTCCTTTCTTGAAGCCAATAATAGAAATGGACAAAGTTAAGACTGTCATCCAAGGATTTCTTCCTGGAATTGCATTGAAGATATTCCTTGTTTTACTTCCTATGATTCTAATGTTCATGTCAAAGATAGAGGGTTACACATCACTCTCATCTCTGGAAAGGAGATCTGCTGCAAAGTATCATTTGTTCATACTTCTCAATGTGTTTCTGGGAAGTATTCTTGCAGGAACAGCATTGGAGCAGCTTGACAAATTTACACACCAGGCCTCATCAGAATACTTAGAAACTATTGGGAGGGCCATGCCAATGAAAGGCACATTCTTTATCACTTATATAATGGTCGATGGCTGGAGTGGAATTGCTCTAGAAATCATCAGATTGCCTGCGCTAGTTCTATACCACCTCAAAAACACATTTTTGGTTAAGACAGAACAAGATAGGGAGGAAGCAATGGATCCTGGTTCCTTGAACTTTGCTACAAACGAACCTAGAATACAGTTATATTTGTTGCTGGGGCTTGTATATTCTGTTGTCACACCTATACTTCTTCCATTTATTCTTATCTTCTTTGCTTTCGCCTACGTGGTTTTCCGTCACCAGATTATTAATGTCTATAATCAGAAATATGAGAGCGGGGCAGCCTTCTGGCCGTATGTGCATATGCGTGTAATTATTGGTTTAATCATATCCCAACTCCTTGTAATTGGACTATTTCGCACATTAGAAGTGAGGCATTCAACATATATCCTCATTGCACAACCTGTTTTGACAATCTGGTTCCATAGAGTCTGCAAGGGTCGTTTCGAACCAGCATTTGTGACGTTTCCTTTACAGGATGCAATGGTGAAGGATACAGTTGAAAAAGCTACCGAACCAAACCTGAATTTGATGGCCTATCTTAAGGATGCTTATGTACATCCTGACTTCAAGGGAGGGGAGCTCAACAAACCCGAGGCCATTGACGAAGAAGAGAGCAGTCCTCTTGTTCCTACAAAGAGGACATCTCAAATGGGTAGTAAACACGAGTCTGAAAGCTCTGAAGGACCTTTTTTGAGATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

620

Amino Acids

71.42

Weight (kDa)

9.04

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 6 - 177 1.9e-39 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 198 - 361 2.9e-48 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 372 - 644 9.4e-86 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010682)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02900 AT4G02900 AT4G02900 AT4G02900
fragaria_vesca FvH4_2g23940 FvH4_2g23940
malus_domestica MD11G1289500.v1.1
prunus_persica Prupe.8G244700_v2.0.a1 Prupe.8G244700_v2.0.a1
pyrus_communis pycom11g25690
rosa_chinensis RchiOBHm_Chr6g0291571
rosa_laevigata RLG00000012106
rosa_roxburghii Rroxscaffold_7G00175960
rosa_rugosa Rorug06G0220300 Rorug06G0220400 Rorug06G0220400
rosa_samantha Rh6AG332700 Rh6CG345900 Rh6DG333100
rosa_wichuraiana Rw6G028890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1431
AccII CGCG 1 cut(s) 562
AciI CCGC 1 cut(s) 1431
AclWI GGATC 4 cut(s) 200, 512, 1247, 1260
AcoI YGGCCR 1 cut(s) 1445
AcsI RAATTY 2 cut(s) 1049, 1681
AcuI CTGAAG 1 cut(s) 1857
AcvI CACGTG 1 cut(s) 644
AdeI CACNNNGTG 1 cut(s) 164
AfaI GTAC 5 cut(s) 104, 113, 198, 353, 1713
AfiI CCNNNNNNNGG 1 cut(s) 1109
AflII CTTAAG 1 cut(s) 1697
AflIII ACRYGT 1 cut(s) 648
AjiI CACGTC 2 cut(s) 90, 649
AjnI CCWGG 3 cut(s) 862, 1059, 1255
AjuI GAANNNNNNNTTGG 2 cut(s) 843, 875
AluBI AGCT 5 cut(s) 575, 1042, 1664, 1738, 1833
AluI AGCT 5 cut(s) 575, 1042, 1664, 1738, 1833
Alw21I GWGCWC 2 cut(s) 586, 1740
Alw26I GTCTC 2 cut(s) 367, 423
AlwI GGATC 4 cut(s) 200, 512, 1247, 1260
AlwNI CAGNNNCTG 1 cut(s) 209
Ama87I CYCGRG 2 cut(s) 635, 1748
AoxI GGCC 7 cut(s) 392, 795, 1062, 1095, 1445, 1689, 1752
ApeKI GCWGC 6 cut(s) 524, 539, 572, 968, 1039, 1436
ApoI RAATTY 2 cut(s) 1049, 1681
AseI ATTAAT 2 cut(s) 447, 1404
Asp700I GAANNNNTTC 1 cut(s) 881
AspLEI GCGC 1 cut(s) 1186
AspS9I GGNCC 3 cut(s) 796, 1095, 1841
AsuHPI GGTGA 2 cut(s) 1385, 1654
AsuII TTCGAA 1 cut(s) 1602
AvaI CYCGRG 2 cut(s) 635, 1748
AvaII GGWCC 1 cut(s) 1841
BamHI GGATCC 1 cut(s) 1252
BanII GRGCYC 2 cut(s) 634, 1740
BauI CACGAG 1 cut(s) 1820
BbrPI CACGTG 1 cut(s) 644
Bbv12I GWGCWC 2 cut(s) 586, 1740
BbvI GCAGC 6 cut(s) 536, 551, 584, 955, 1051, 1448
BccI CCATC 5 cut(s) 264, 558, 620, 1136, 1681
BceAI ACGGC 2 cut(s) 147, 1432
BciT130I CCWGG 3 cut(s) 864, 1061, 1257
BciVI GTATCC 1 cut(s) 1642
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 2 cut(s) 367, 423
BfaI CTAG 6 cut(s) 42, 309, 770, 1163, 1187, 1287
BfmI CTRYAG 1 cut(s) 522
BfrI CTTAAG 1 cut(s) 1697
BfuI GTATCC 1 cut(s) 1642
BglII AGATCT 2 cut(s) 962, 1853
BisI GCNGC 6 cut(s) 525, 540, 573, 969, 1040, 1437
BlsI GCNGC 6 cut(s) 526, 541, 574, 970, 1041, 1438
Bme1390I CCNGG 3 cut(s) 864, 1061, 1257
Bme18I GGWCC 1 cut(s) 1841
BmeT110I CYCGRG 2 cut(s) 635, 1748
BmgBI CACGTC 2 cut(s) 90, 649
BmgT120I GGNCC 3 cut(s) 796, 1095, 1841
BmiI GGNNCC 4 cut(s) 633, 1254, 1261, 1577
BmrFI CCNGG 3 cut(s) 864, 1061, 1257
BmsI GCATC 4 cut(s) 158, 430, 1624, 1693
BplI GAGNNNNNCTC 6 cut(s) 1722, 1754, 1762, 1794, 1786, 1818
BpmI CTGGAG 1 cut(s) 1168
Bpu14I TTCGAA 1 cut(s) 1602
BsaAI YACGTR 2 cut(s) 644, 1381
BsaBI GATNNNNATC 1 cut(s) 267
BsaJI CCNNGG 2 cut(s) 850, 1749
BsaXI ACNNNNNCTCC 4 cut(s) 420, 450, 561, 591
Bsc4I CCNNNNNNNGG 1 cut(s) 1109
Bse3DI GCAATG 4 cut(s) 48, 1254, 1548, 1644
Bse8I GATNNNNATC 1 cut(s) 267
BseBI CCWGG 3 cut(s) 864, 1061, 1257
BseDI CCNNGG 2 cut(s) 850, 1749
BseGI GGATG 7 cut(s) 256, 376, 445, 846, 1639, 1708, 1714
BseJI GATNNNNATC 1 cut(s) 267
BseLI CCNNNNNNNGG 1 cut(s) 1109
BseMI GCAATG 4 cut(s) 48, 1254, 1548, 1644
BseMII CTCAG 2 cut(s) 453, 605
BseXI GCAGC 6 cut(s) 536, 551, 584, 955, 1051, 1448
BseYI CCCAGC 1 cut(s) 1309
BsgI GTGCAG 1 cut(s) 186
Bsh1236I CGCG 1 cut(s) 562
BshFI GGCC 7 cut(s) 394, 797, 1064, 1097, 1447, 1691, 1754
BsiHKAI GWGCWC 2 cut(s) 586, 1740
BsiHKCI CYCGRG 2 cut(s) 635, 1748
BslI CCNNNNNNNGG 1 cut(s) 1109
BsmAI GTCTC 2 cut(s) 367, 423
BsmI GAATGC 2 cut(s) 755, 1531
BsnI GGCC 7 cut(s) 394, 797, 1064, 1097, 1447, 1691, 1754
BsoBI CYCGRG 2 cut(s) 635, 1748
Bsp119I TTCGAA 1 cut(s) 1602
Bsp1286I GDGCHC 3 cut(s) 586, 634, 1740
Bsp1407I TGTACA 1 cut(s) 1711
Bsp143I GATC 8 cut(s) 3, 169, 205, 262, 517, 962, 1252, 1853
Bsp68I TCGCGA 1 cut(s) 562
BspACI CCGC 1 cut(s) 1431
BspANI GGCC 7 cut(s) 394, 797, 1064, 1097, 1447, 1691, 1754
BspCNI CTCAG 2 cut(s) 454, 604
BspFNI CGCG 1 cut(s) 562
BspLI GGNNCC 4 cut(s) 633, 1254, 1261, 1577
BspMAI CTGCAG 1 cut(s) 526
BspPI GGATC 4 cut(s) 200, 512, 1247, 1260
BspT104I TTCGAA 1 cut(s) 1602
BspTI CTTAAG 1 cut(s) 1697
BsrBI CCGCTC 1 cut(s) 1431
BsrDI GCAATG 4 cut(s) 48, 1254, 1548, 1644
BsrGI TGTACA 1 cut(s) 1711
BssECI CCNNGG 2 cut(s) 850, 1749
BssMI GATC 8 cut(s) 3, 169, 205, 262, 517, 962, 1252, 1853
BssSI CACGAG 1 cut(s) 1820
BssT1I CCWWGG 1 cut(s) 850
Bst2BI CACGAG 1 cut(s) 1820
Bst2UI CCWGG 3 cut(s) 864, 1061, 1257
Bst4CI ACNGT 4 cut(s) 702, 844, 1296, 1654
Bst6I CTCTTC 3 cut(s) 323, 480, 1761
BstAFI CTTAAG 1 cut(s) 1697
BstAUI TGTACA 1 cut(s) 1711
BstBAI YACGTR 2 cut(s) 644, 1381
BstBI TTCGAA 1 cut(s) 1602
BstC8I GCNNGC 3 cut(s) 227, 537, 1182
BstDEI CTNAG 5 cut(s) 381, 462, 591, 1078, 1857
BstF5I GGATG 7 cut(s) 256, 376, 445, 846, 1639, 1708, 1714
BstFNI CGCG 1 cut(s) 562
BstHHI GCGC 1 cut(s) 1186
BstKTI GATC 8 cut(s) 6, 172, 208, 265, 520, 965, 1255, 1856
BstMAI GTCTC 2 cut(s) 367, 423
BstMBI GATC 8 cut(s) 3, 169, 205, 262, 517, 962, 1252, 1853
BstMWI GCNNNNNNNGC 3 cut(s) 581, 1028, 1453
BstNI CCWGG 3 cut(s) 864, 1061, 1257
BstNSI RCATGY 1 cut(s) 233
BstSCI CCNGG 3 cut(s) 862, 1059, 1255
BstSFI CTRYAG 1 cut(s) 522
BstUI CGCG 1 cut(s) 562
BstV1I GCAGC 6 cut(s) 536, 551, 584, 955, 1051, 1448
BstX2I RGATCY 4 cut(s) 205, 962, 1252, 1853
BstYI RGATCY 4 cut(s) 205, 962, 1252, 1853
BsuI GTATCC 1 cut(s) 1642
BsuRI GGCC 7 cut(s) 394, 797, 1064, 1097, 1447, 1691, 1754
BtgZI GCGATG 1 cut(s) 577
BtrI CACGTC 2 cut(s) 90, 649
BtsCI GGATG 7 cut(s) 256, 376, 445, 846, 1639, 1708, 1714
BtuMI TCGCGA 1 cut(s) 562
Cac8I GCNNGC 3 cut(s) 227, 537, 1182
CaiI CAGNNNCTG 1 cut(s) 209
CfoI GCGC 1 cut(s) 1186
Cfr13I GGNCC 3 cut(s) 796, 1095, 1841
Csp6I GTAC 5 cut(s) 103, 112, 197, 352, 1712
CviAII CATG 5 cut(s) 21, 230, 706, 916, 1099
CviQI GTAC 5 cut(s) 103, 112, 197, 352, 1712
DdeI CTNAG 5 cut(s) 381, 462, 591, 1078, 1857
DpnI GATC 8 cut(s) 5, 171, 207, 264, 519, 964, 1254, 1855
DpnII GATC 8 cut(s) 3, 169, 205, 262, 517, 962, 1252, 1853
DraIII CACNNNGTG 1 cut(s) 164
EaeI YGGCCR 1 cut(s) 1445
Eam1104I CTCTTC 3 cut(s) 323, 480, 1761
EarI CTCTTC 3 cut(s) 323, 480, 1761
Ecl136II GAGCTC 1 cut(s) 1738
Eco130I CCWWGG 1 cut(s) 850
Eco147I AGGCCT 2 cut(s) 394, 1064
Eco24I GRGCYC 2 cut(s) 634, 1740
Eco47I GGWCC 1 cut(s) 1841
Eco53kI GAGCTC 1 cut(s) 1738
Eco57I CTGAAG 1 cut(s) 1857
Eco72I CACGTG 1 cut(s) 644
Eco88I CYCGRG 2 cut(s) 635, 1748
EcoICRI GAGCTC 1 cut(s) 1738
EcoO109I RGGNCCY 2 cut(s) 796, 1841
EcoRII CCWGG 3 cut(s) 862, 1059, 1255
EcoT14I CCWWGG 1 cut(s) 850
EcoT38I GRGCYC 2 cut(s) 634, 1740
ErhI CCWWGG 1 cut(s) 850
FaeI CATG 5 cut(s) 24, 233, 709, 919, 1102
FalI AAGNNNNNCTT 2 cut(s) 843, 875
FatI CATG 5 cut(s) 20, 229, 705, 915, 1098
FauI CCCGC 1 cut(s) 1424
FauNDI CATATG 2 cut(s) 676, 1458
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 6 cut(s) 525, 540, 573, 969, 1040, 1437
FokI GGATG 7 cut(s) 243, 363, 452, 833, 1646, 1701, 1715
FriOI GRGCYC 2 cut(s) 634, 1740
Fsp4HI GCNGC 6 cut(s) 525, 540, 573, 969, 1040, 1437
FspBI CTAG 6 cut(s) 42, 309, 770, 1163, 1187, 1287
GlaI GCGC 1 cut(s) 1185
GluI GCNGC 6 cut(s) 525, 540, 573, 969, 1040, 1437
GsaI CCCAGC 1 cut(s) 1313
GsuI CTGGAG 1 cut(s) 1168
HaeIII GGCC 7 cut(s) 394, 797, 1064, 1097, 1447, 1691, 1754
HhaI GCGC 1 cut(s) 1186
Hin1II CATG 5 cut(s) 24, 233, 709, 919, 1102
Hin6I GCGC 1 cut(s) 1184
HinP1I GCGC 1 cut(s) 1184
HincII GTYRAC 1 cut(s) 621
HindII GTYRAC 1 cut(s) 621
HinfI GANTC 5 cut(s) 215, 745, 904, 1584, 1823
HphI GGTGA 2 cut(s) 1385, 1654
Hpy166II GTNNAC 4 cut(s) 253, 352, 621, 1817
Hpy188I TCNGA 6 cut(s) 463, 1072, 1175, 1419, 1828, 1837
Hpy188III TCNNGA 8 cut(s) 209, 260, 561, 635, 808, 953, 1163, 1718
Hpy8I GTNNAC 4 cut(s) 253, 352, 621, 1817
HpyAV CCTTC 5 cut(s) 787, 809, 1450, 1639, 1832
HpyCH4III ACNGT 4 cut(s) 702, 844, 1296, 1654
HpyCH4IV ACGT 5 cut(s) 89, 643, 648, 1380, 1619
HpyF10VI GCNNNNNNNGC 3 cut(s) 581, 1028, 1453
HpyF3I CTNAG 5 cut(s) 381, 462, 591, 1078, 1857
HpySE526I ACGT 5 cut(s) 89, 643, 648, 1380, 1619
Hsp92II CATG 5 cut(s) 24, 233, 709, 919, 1102
HspAI GCGC 1 cut(s) 1184
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 8 cut(s) 3, 169, 205, 262, 517, 962, 1252, 1853
LmnI GCTCC 4 cut(s) 569, 637, 1036, 1735
Lsp1109I GCAGC 6 cut(s) 536, 551, 584, 955, 1051, 1448
LweI GCATC 4 cut(s) 158, 430, 1624, 1693
MaeI CTAG 6 cut(s) 42, 309, 770, 1163, 1187, 1287
MaeII ACGT 5 cut(s) 89, 643, 648, 1380, 1619
MaeIII GTNAC 5 cut(s) 644, 932, 1330, 1391, 1615
MalI GATC 8 cut(s) 5, 171, 207, 264, 519, 964, 1254, 1855
MbiI CCGCTC 1 cut(s) 1431
MboI GATC 8 cut(s) 3, 169, 205, 262, 517, 962, 1252, 1853
MflI RGATCY 4 cut(s) 205, 962, 1252, 1853
MhlI GDGCHC 3 cut(s) 586, 634, 1740
MlyI GAGTC 3 cut(s) 224, 1593, 1832
MroXI GAANNNNTTC 1 cut(s) 881
MseI TTAA 8 cut(s) 32, 389, 447, 837, 1221, 1404, 1478, 1698
MslI CAYNNNNRTG 2 cut(s) 1103, 1461
MspA1I CMGCKG 1 cut(s) 575
MspCI CTTAAG 1 cut(s) 1697
MspR9I CCNGG 3 cut(s) 864, 1061, 1257
Mva1269I GAATGC 2 cut(s) 755, 1531
MvaI CCWGG 3 cut(s) 864, 1061, 1257
MvnI CGCG 1 cut(s) 562
MwoI GCNNNNNNNGC 3 cut(s) 581, 1028, 1453
NdeI CATATG 2 cut(s) 676, 1458
NdeII GATC 8 cut(s) 3, 169, 205, 262, 517, 962, 1252, 1853
NlaIII CATG 5 cut(s) 24, 233, 709, 919, 1102
NlaIV GGNNCC 4 cut(s) 633, 1254, 1261, 1577
NmuCI GTSAC 4 cut(s) 644, 1330, 1391, 1615
NruI TCGCGA 1 cut(s) 562
NspI RCATGY 1 cut(s) 233
NspV TTCGAA 1 cut(s) 1602
PceI AGGCCT 2 cut(s) 394, 1064
PctI GAATGC 2 cut(s) 755, 1531
PdmI GAANNNNTTC 1 cut(s) 881
PfeI GAWTC 2 cut(s) 745, 904
PfoI TCCNGGA 1 cut(s) 862
PkrI GCNGC 6 cut(s) 526, 541, 574, 970, 1041, 1438
PleI GAGTC 3 cut(s) 223, 1592, 1831
PmaCI CACGTG 1 cut(s) 644
PmlI CACGTG 1 cut(s) 644
PpsI GAGTC 3 cut(s) 223, 1592, 1831
Ppu21I YACGTR 2 cut(s) 644, 1381
PpuMI RGGWCCY 1 cut(s) 1841
PshBI ATTAAT 2 cut(s) 447, 1404
Psp124BI GAGCTC 1 cut(s) 1740
Psp5II RGGWCCY 1 cut(s) 1841
Psp6I CCWGG 3 cut(s) 862, 1059, 1255
PspCI CACGTG 1 cut(s) 644
PspFI CCCAGC 1 cut(s) 1309
PspGI CCWGG 3 cut(s) 862, 1059, 1255
PspN4I GGNNCC 4 cut(s) 633, 1254, 1261, 1577
PspPI GGNCC 3 cut(s) 796, 1095, 1841
PspPPI RGGWCCY 1 cut(s) 1841
PsrI GAACNNNNNNTAC 4 cut(s) 968, 1000, 1275, 1307
PstI CTGCAG 1 cut(s) 526
PstNI CAGNNNCTG 1 cut(s) 209
PsuI RGATCY 4 cut(s) 205, 962, 1252, 1853
PvuII CAGCTG 1 cut(s) 575
RruI TCGCGA 1 cut(s) 562
RsaI GTAC 5 cut(s) 104, 113, 198, 353, 1713
RsaNI GTAC 5 cut(s) 103, 112, 197, 352, 1712
RseI CAYNNNNRTG 2 cut(s) 1103, 1461
SacI GAGCTC 1 cut(s) 1740
SaqAI TTAA 8 cut(s) 32, 389, 447, 837, 1221, 1404, 1478, 1698
SatI GCNGC 6 cut(s) 525, 540, 573, 969, 1040, 1437
Sau3AI GATC 8 cut(s) 3, 169, 205, 262, 517, 962, 1252, 1853
Sau96I GGNCC 3 cut(s) 796, 1095, 1841
SchI GAGTC 3 cut(s) 224, 1593, 1832
ScrFI CCNGG 3 cut(s) 864, 1061, 1257
SduI GDGCHC 3 cut(s) 586, 634, 1740
SfaNI GCATC 4 cut(s) 158, 430, 1624, 1693
SfcI CTRYAG 1 cut(s) 522
SfuI TTCGAA 1 cut(s) 1602
SinI GGWCC 1 cut(s) 1841
SmiMI CAYNNNNRTG 2 cut(s) 1103, 1461
SmlI CTYRAG 1 cut(s) 1697
SmoI CTYRAG 1 cut(s) 1697
SseBI AGGCCT 2 cut(s) 394, 1064
SsiI CCGC 1 cut(s) 1431
SspMI CTAG 6 cut(s) 42, 309, 770, 1163, 1187, 1287
SstI GAGCTC 1 cut(s) 1740
StuI AGGCCT 2 cut(s) 394, 1064
StyD4I CCNGG 3 cut(s) 862, 1059, 1255
StyI CCWWGG 1 cut(s) 850
TaaI ACNGT 4 cut(s) 702, 844, 1296, 1654
TaiI ACGT 5 cut(s) 92, 646, 651, 1383, 1622
TaqI TCGA 5 cut(s) 108, 234, 599, 1140, 1602
TatI WGTACW 4 cut(s) 102, 111, 351, 1711
TfiI GAWTC 2 cut(s) 745, 904
Tru1I TTAA 8 cut(s) 32, 389, 447, 837, 1221, 1404, 1478, 1698
Tru9I TTAA 8 cut(s) 32, 389, 447, 837, 1221, 1404, 1478, 1698
TseFI GTSAC 4 cut(s) 644, 1330, 1391, 1615
TseI GCWGC 6 cut(s) 524, 539, 572, 968, 1039, 1436
Tsp45I GTSAC 4 cut(s) 644, 1330, 1391, 1615
TspDTI ATGAA 6 cut(s) 37, 540, 694, 904, 976, 1121
TspGWI ACGGA 1 cut(s) 1379
Vha464I CTTAAG 1 cut(s) 1697
VpaK11BI GGWCC 1 cut(s) 1841
VspI ATTAAT 2 cut(s) 447, 1404
XapI RAATTY 2 cut(s) 1049, 1681
XbaI TCTAGA 1 cut(s) 1162
XceI RCATGY 1 cut(s) 233
XmnI GAANNNNTTC 1 cut(s) 881
XspI CTAG 6 cut(s) 42, 309, 770, 1163, 1187, 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.