pycom11g25690

CSC1-like protein At4g02900

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0010682
Physical Location & Seq
Forward (+)
28437059 .. 28442318
5260 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g25690.5

Sequence Viewer

Length: 2217 bp
ATGGCGAATTTTCAAGATATTATGATGTCAGCAGCCATCAACATTCTGTCTGCATTCGGATTTCTGGCGGCGTTTGGTCTGCTGCGGCTGCAGCCGTTCAACGACAGAGTCTACTTTCCGAAATGGTACCTCAAGGGGATGAGGGGAAGCCCCACGAGCTCCGGCGCCACCGTTAGGAAATTCGTCAATCTGGACGCCAAAACCTACTTCAAGTTCCTCAATTGGATGCCTGCCGCGCTGCGGATGCCCGAACCGGAGCTCATTGATCACGCCGGCCTTGATTCCGCCGCTTACATTCGGATTTATGTACTCGGGAATGTACCCCCAGATCCTGATGAATCAGTCAGTGAGCATATCGAACATTTTTTCTGTGTAAACCATCCCGATCACTATCTTACACATCAAGTAAGCCACTTGCTGAACTTGGTTAGTTTTGTTGTATACAATGCAAATAAACTTGCACAGGTGGTCGACAAGAAGAAGAGTACGAAAAATTGGCTTGTGTACTACCAAAACAAGTTTGAGAGAAATCCCAAGACAAAGCCTACTACAAAGGTTTCTTTTTTTACAGGTTTCTTGGGCCTATGGGGAGATAGAGTCGACGCGATTGATTACTACAATGATACGATCAAGAAGTTGGTCGAAGAAGAAAAGCAAGAACGAGAAAAGGTTATAAGTGATCCTGATGCCATAATGCCTGCAGCATTTGTTTCATTCAAAACGCGATGGGGAGCAGCTGTGTGTGCTCAAACTCAGCAGTCAAGTAATCCTACCATCTGGTTGACGGAGTGGGCTCCTGAGCCACGCGACATCTATTGGAATAACCTTGCAATTCCATATGTTGAACTCAACGTGCGAAAATTGCTCATGGGTGTTGCCTTTTTCTTCCTTACTTTCTTCTTCATGATTCCAATTGCGTTCGTCCAATCTTTAGCTAACATCGAGGGGATTCAGAAGGCCCTTCCTTTCTTGAAGCCACTACTTCAGATAAGTTCTGTCAAGTCTGTTGTCCAAGGGTTTCTTCCGGGAATTGCATTAAAGATATTTCTTGCTATACTTCCCATGATTCTTATGCTTATGTCAAAGATTGAGGGCTTAACATCACTCTCACATCTGGATAGGAGATCTGCAGCGAAGTATCATTTGTTCATACTTATCAATGTGTTCCTAGGAAGCATTGTTGCTGGAACAGCACTTCAGCAGCTTGAGAAACTTATGAATGAGCCCTCAACCGAGTTCACAAAAACTGTTGGGAGGTCCATCCCAATGAAAGGTACATTCTTCATCACTTATGTCATGGTTGATGGTTGGAGTGGAATCGCTGCAGAAATCCTCAGATTGGTGCCGTTAATTTTGTTTCACCTCAAGAACACATTTCTGGTTAAGACAGAACAAGATAGGGAGCAGGCAACGGATCCCGGTTCCTTGAATTTCGCCACAAACGAACCTAGGACACAATTATATTTTCTGCTGGGTCTTGTTTATTCTGTTGTCACACCTATACTACTTCCTTTCATTCTCATATTCTTCGCTTTTGCCTACGTAGTTTATCGCCATCAGATTATTAATGTCTATGACCAGAAATATGAGAGTGGTGCGGCCTTCTGGCCACAAGTGCATCTTCGTGTAATTATCGGTCTAATCATAGCACAAGTTCTACTAATGGGGCTGTTTAGCACATTAGGCGTTGCGAAATCAACATTCATTCTCATCCCGCAACCTATTTTGACAATCTGGTTCCATAGAGTCTGCAAGGGGCGTTTCGAATCAGCATTCCTAAAATTCCCACTACAGAGTCATAAAAATATGCGGCTCTCGCATTCTGAATGCCGTTACTATACTGTATTCTTAGCAATACCATATTCTCAATGTGCTTGGTTTGGCAACAAACAGGAGGCAATGGTGAAGGATACAGTCGAGCGGGCAACGGAACCAAACCTGAATCTGTTGAACTATCTGAAGGACGCTTACGTGCATCCCGTCTTCAAGGGAGGAGCAGTCCTCTCGTTGTTACAAAGAGAACGTCTCAAATGGGAAGTAAACACGAGTCCGACTCCGGTCCTGAAATTCGCAGTTAGTTTTTCTTTCCGGCAGACACATCTTTTAGGTTCAAAACCCTTCTTTCTTGTAAATGATCATGGATTTTATAGTGTTCATTCTGTGGATGATAGGGAAGATGCAGACATATTAGAATGTCAATGTAGCGATGGAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

739

Amino Acids

84.12

Weight (kDa)

8.95

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010682)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02900 AT4G02900 AT4G02900 AT4G02900
fragaria_vesca FvH4_2g23940 FvH4_2g23940
malus_domestica MD11G1289500.v1.1
prunus_persica Prupe.8G244700_v2.0.a1 Prupe.8G244700_v2.0.a1
pyrus_communis pycom11g25690
rosa_chinensis RchiOBHm_Chr6g0291571
rosa_laevigata RLG00000012106
rosa_roxburghii Rroxscaffold_7G00175960
rosa_rugosa Rorug06G0220300 Rorug06G0220400 Rorug06G0220400
rosa_samantha Rh6AG332700 Rh6CG345900 Rh6DG333100
rosa_wichuraiana Rw6G028890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 674
Acc65I GGTACC 1 cut(s) 126
AccB1I GGYRCC 3 cut(s) 126, 164, 1342
AccBSI CCGCTC 1 cut(s) 1921
AccI GTMKAC 4 cut(s) 111, 441, 471, 600
AccII CGCG 4 cut(s) 236, 605, 724, 807
AclWI GGATC 4 cut(s) 323, 674, 1409, 1422
AcoI YGGCCR 1 cut(s) 1607
AcsI RAATTY 5 cut(s) 7, 179, 1429, 1781, 2066
AcuI CTGAAG 3 cut(s) 968, 1181, 1979
AcyI GRCGYC 2 cut(s) 165, 195
AfaI GTAC 6 cut(s) 128, 309, 321, 487, 506, 1276
AfiI CCNNNNNNNGG 4 cut(s) 174, 240, 1271, 1339
AjuI GAANNNNNNNTTGG 4 cut(s) 191, 223, 1005, 1037
AluBI AGCT 5 cut(s) 159, 259, 737, 935, 1204
AluI AGCT 5 cut(s) 159, 259, 737, 935, 1204
Alw21I GWGCWC 3 cut(s) 161, 261, 748
Alw26I GTCTC 1 cut(s) 2030
AlwI GGATC 4 cut(s) 323, 674, 1409, 1422
AlwNI CAGNNNCTG 1 cut(s) 332
Ama87I CYCGRG 1 cut(s) 311
AoxI GGCC 5 cut(s) 274, 580, 957, 1599, 1607
ApoI RAATTY 5 cut(s) 7, 179, 1429, 1781, 2066
ArsI GACNNNNNNTTYG 2 cut(s) 2008, 2040
AseI ATTAAT 1 cut(s) 1566
Asp718I GGTACC 1 cut(s) 126
AspA2I CCTAGG 2 cut(s) 1168, 1448
AspLEI GCGC 2 cut(s) 167, 238
AspS9I GGNCC 4 cut(s) 580, 958, 1257, 2059
AsuC2I CCSGG 2 cut(s) 1026, 1419
AsuHPI GGTGA 2 cut(s) 1352, 1915
AsuII TTCGAA 1 cut(s) 1764
AvaI CYCGRG 1 cut(s) 311
AvaII GGWCC 2 cut(s) 1257, 2059
AvrII CCTAGG 2 cut(s) 1168, 1448
BalI TGGCCA 1 cut(s) 1609
BamHI GGATCC 1 cut(s) 1414
BanI GGYRCC 3 cut(s) 126, 164, 1342
BanII GRGCYC 4 cut(s) 161, 261, 796, 1227
BarI GAAGNNNNNNTAC 2 cut(s) 1952, 1984
BauI CACGAG 2 cut(s) 154, 2044
BbsI GAAGAC 1 cut(s) 1975
Bbv12I GWGCWC 3 cut(s) 161, 261, 748
BccI CCATC 8 cut(s) 44, 387, 720, 782, 1268, 1298, 1563, 2201
BceAI ACGGC 3 cut(s) 79, 1330, 1815
BcgI CGANNNNNNTGC 2 cut(s) 1986, 2020
BciVI GTATCC 1 cut(s) 1903
BclI TGATCA 2 cut(s) 265, 2134
BcnI CCSGG 2 cut(s) 1026, 1419
BcoDI GTCTC 1 cut(s) 2030
BfaI CTAG 2 cut(s) 1169, 1449
BfmI CTRYAG 5 cut(s) 89, 699, 1128, 1323, 1790
BfoI RGCGCY 1 cut(s) 168
BfuI GTATCC 1 cut(s) 1903
BglII AGATCT 1 cut(s) 1124
BlnI CCTAGG 2 cut(s) 1168, 1448
Bme1390I CCNGG 2 cut(s) 1026, 1419
Bme18I GGWCC 2 cut(s) 1257, 2059
BmeT110I CYCGRG 1 cut(s) 311
BmgT120I GGNCC 4 cut(s) 580, 958, 1257, 2059
BmiI GGNNCC 8 cut(s) 128, 166, 795, 1344, 1416, 1423, 1739, 1932
BmrFI CCNGG 2 cut(s) 1026, 1419
BmsI GCATC 6 cut(s) 216, 234, 676, 1627, 1984, 2167
BoxI GACNNNNGTC 1 cut(s) 2057
BpiI GAAGAC 1 cut(s) 1975
BplI GAGNNNNNCTC 6 cut(s) 1986, 2018, 2010, 2042, 2038, 2070
Bpu10I CCTNAGC 1 cut(s) 798
Bpu14I TTCGAA 1 cut(s) 1764
BpuEI CTTGAG 3 cut(s) 116, 1226, 1349
BpuMI CCSGG 2 cut(s) 1026, 1419
BsaAI YACGTR 2 cut(s) 1543, 1972
BsaBI GATNNNNATC 1 cut(s) 390
BsaHI GRCGYC 2 cut(s) 165, 195
BsaJI CCNNGG 3 cut(s) 1012, 1168, 1448
BsaWI WCCGGW 2 cut(s) 253, 2056
BsaXI ACNNNNNCTCC 6 cut(s) 582, 612, 723, 753, 1983, 2013
Bsc4I CCNNNNNNNGG 4 cut(s) 174, 240, 1271, 1339
Bse118I RCCGGY 1 cut(s) 272
Bse3DI GCAATG 1 cut(s) 1905
Bse8I GATNNNNATC 1 cut(s) 390
BseDI CCNNGG 3 cut(s) 1012, 1168, 1448
BseGI GGATG 8 cut(s) 144, 231, 249, 379, 1260, 1710, 1975, 2170
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 174, 240, 1271, 1339
BseMI GCAATG 1 cut(s) 1905
BseMII CTCAG 3 cut(s) 767, 789, 1348
BseRI GAGGAG 1 cut(s) 2007
BseYI CCCAGC 1 cut(s) 1471
Bsh1236I CGCG 4 cut(s) 236, 605, 724, 807
BshFI GGCC 5 cut(s) 276, 582, 959, 1601, 1609
BshNI GGYRCC 3 cut(s) 126, 164, 1342
BsiHKAI GWGCWC 3 cut(s) 161, 261, 748
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 7 cut(s) 162, 254, 273, 1025, 1419, 2057, 2089
BslI CCNNNNNNNGG 4 cut(s) 174, 240, 1271, 1339
BsmAI GTCTC 1 cut(s) 2030
BsmBI CGTCTC 1 cut(s) 2030
BsmI GAATGC 4 cut(s) 53, 1772, 1819, 1832
BsnI GGCC 5 cut(s) 276, 582, 959, 1601, 1609
BsoBI CYCGRG 1 cut(s) 311
Bsp119I TTCGAA 1 cut(s) 1764
Bsp1286I GDGCHC 5 cut(s) 161, 261, 748, 796, 1227
Bsp143I GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
BspANI GGCC 5 cut(s) 276, 582, 959, 1601, 1609
BspCNI CTCAG 3 cut(s) 766, 790, 1347
BspFNI CGCG 4 cut(s) 236, 605, 724, 807
BspHI TCATGA 1 cut(s) 903
BspLI GGNNCC 8 cut(s) 128, 166, 795, 1344, 1416, 1423, 1739, 1932
BspMAI CTGCAG 4 cut(s) 93, 703, 1132, 1327
BspPI GGATC 4 cut(s) 323, 674, 1409, 1422
BspT104I TTCGAA 1 cut(s) 1764
BspT107I GGYRCC 3 cut(s) 126, 164, 1342
BsrBI CCGCTC 1 cut(s) 1921
BsrDI GCAATG 1 cut(s) 1905
BsrFI RCCGGY 1 cut(s) 272
BssAI RCCGGY 1 cut(s) 272
BssECI CCNNGG 3 cut(s) 1012, 1168, 1448
BssMI GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
BssNAI GTATAC 1 cut(s) 442
BssNI GRCGYC 2 cut(s) 165, 195
BssSI CACGAG 2 cut(s) 154, 2044
BssT1I CCWWGG 3 cut(s) 1012, 1168, 1448
Bst1107I GTATAC 1 cut(s) 442
Bst2BI CACGAG 2 cut(s) 154, 2044
Bst4CI ACNGT 4 cut(s) 172, 1249, 1843, 1915
Bst6I CTCTTC 1 cut(s) 476
BstACI GRCGYC 2 cut(s) 165, 195
BstBAI YACGTR 2 cut(s) 1543, 1972
BstBI TTCGAA 1 cut(s) 1764
BstC8I GCNNGC 5 cut(s) 231, 274, 699, 1407, 1923
BstDEI CTNAG 4 cut(s) 753, 798, 1334, 1849
BstF5I GGATG 8 cut(s) 144, 231, 249, 379, 1260, 1710, 1975, 2170
BstFNI CGCG 4 cut(s) 236, 605, 724, 807
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 2 cut(s) 167, 238
BstKTI GATC 8 cut(s) 268, 331, 388, 630, 682, 1127, 1417, 2137
BstMAI GTCTC 1 cut(s) 2030
BstMBI GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
BstPAI GACNNNNGTC 1 cut(s) 2057
BstSCI CCNGG 2 cut(s) 1024, 1417
BstSFI CTRYAG 5 cut(s) 89, 699, 1128, 1323, 1790
BstSNI TACGTA 1 cut(s) 1543
BstUI CGCG 4 cut(s) 236, 605, 724, 807
BstV2I GAAGAC 1 cut(s) 1975
BstX2I RGATCY 3 cut(s) 328, 1124, 1414
BstYI RGATCY 3 cut(s) 328, 1124, 1414
BstZ17I GTATAC 1 cut(s) 442
BsuI GTATCC 1 cut(s) 1903
BsuRI GGCC 5 cut(s) 276, 582, 959, 1601, 1609
BtgZI GCGATG 1 cut(s) 739
BtsCI GGATG 8 cut(s) 144, 231, 249, 379, 1260, 1710, 1975, 2170
BtsIMutI CAGTG 1 cut(s) 352
Cac8I GCNNGC 5 cut(s) 231, 274, 699, 1407, 1923
CaiI CAGNNNCTG 1 cut(s) 332
CciI TCATGA 1 cut(s) 903
CfoI GCGC 2 cut(s) 167, 238
Cfr10I RCCGGY 1 cut(s) 272
Cfr13I GGNCC 4 cut(s) 580, 958, 1257, 2059
CseI GACGC 3 cut(s) 203, 611, 1973
Csp6I GTAC 6 cut(s) 127, 308, 320, 486, 505, 1275
CviAII CATG 5 cut(s) 868, 904, 1063, 1297, 2138
CviQI GTAC 6 cut(s) 127, 308, 320, 486, 505, 1275
DdeI CTNAG 4 cut(s) 753, 798, 1334, 1849
DinI GGCGCC 1 cut(s) 166
DpnI GATC 8 cut(s) 267, 330, 387, 629, 681, 1126, 1416, 2136
DpnII GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
EaeI YGGCCR 1 cut(s) 1607
Eam1104I CTCTTC 1 cut(s) 476
EarI CTCTTC 1 cut(s) 476
EciI GGCGGA 1 cut(s) 274
Ecl136II GAGCTC 2 cut(s) 159, 259
Eco105I TACGTA 1 cut(s) 1543
Eco130I CCWWGG 3 cut(s) 1012, 1168, 1448
Eco24I GRGCYC 4 cut(s) 161, 261, 796, 1227
Eco47I GGWCC 2 cut(s) 1257, 2059
Eco53kI GAGCTC 2 cut(s) 159, 259
Eco57I CTGAAG 3 cut(s) 968, 1181, 1979
Eco88I CYCGRG 1 cut(s) 311
EcoICRI GAGCTC 2 cut(s) 159, 259
EcoO109I RGGNCCY 1 cut(s) 958
EcoT14I CCWWGG 3 cut(s) 1012, 1168, 1448
EcoT38I GRGCYC 4 cut(s) 161, 261, 796, 1227
EgeI GGCGCC 1 cut(s) 166
EheI GGCGCC 1 cut(s) 166
ErhI CCWWGG 3 cut(s) 1012, 1168, 1448
Esp3I CGTCTC 1 cut(s) 2030
FaeI CATG 5 cut(s) 871, 907, 1066, 1300, 2141
FalI AAGNNNNNCTT 4 cut(s) 1005, 1037, 1605, 1637
FatI CATG 5 cut(s) 867, 903, 1062, 1296, 2137
FauI CCCGC 2 cut(s) 1722, 1914
FauNDI CATATG 1 cut(s) 838
FbaI TGATCA 2 cut(s) 265, 2134
FblI GTMKAC 4 cut(s) 111, 441, 471, 600
FokI GGATG 8 cut(s) 151, 238, 256, 366, 1247, 1697, 1962, 2177
FriOI GRGCYC 4 cut(s) 161, 261, 796, 1227
FspBI CTAG 2 cut(s) 1169, 1449
GlaI GCGC 2 cut(s) 166, 237
GsaI CCCAGC 1 cut(s) 1475
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 5 cut(s) 276, 582, 959, 1601, 1609
HapII CCGG 7 cut(s) 162, 254, 273, 1025, 1419, 2057, 2089
HgaI GACGC 3 cut(s) 203, 611, 1973
HhaI GCGC 2 cut(s) 167, 238
Hin1I GRCGYC 2 cut(s) 165, 195
Hin1II CATG 5 cut(s) 871, 907, 1066, 1300, 2141
Hin6I GCGC 2 cut(s) 165, 236
HinP1I GCGC 2 cut(s) 165, 236
HincII GTYRAC 3 cut(s) 472, 601, 783
HindII GTYRAC 3 cut(s) 472, 601, 783
HpaII CCGG 7 cut(s) 162, 254, 273, 1025, 1419, 2057, 2089
HphI GGTGA 2 cut(s) 1352, 1915
Hpy166II GTNNAC 9 cut(s) 112, 376, 442, 472, 505, 601, 783, 1239, 2041
Hpy8I GTNNAC 9 cut(s) 112, 376, 442, 472, 505, 601, 783, 1239, 2041
Hpy99I CGWCG 1 cut(s) 605
HpyAV CCTTC 6 cut(s) 949, 971, 1612, 1900, 1954, 2128
HpyCH4III ACNGT 4 cut(s) 172, 1249, 1843, 1915
HpyCH4IV ACGT 4 cut(s) 852, 1542, 1971, 2023
HpyF3I CTNAG 4 cut(s) 753, 798, 1334, 1849
HpySE526I ACGT 4 cut(s) 852, 1542, 1971, 2023
Hsp92I GRCGYC 2 cut(s) 165, 195
Hsp92II CATG 5 cut(s) 871, 907, 1066, 1300, 2141
HspAI GCGC 2 cut(s) 165, 236
KasI GGCGCC 1 cut(s) 164
KpnI GGTACC 1 cut(s) 130
KroI GCCGGC 1 cut(s) 272
KroNI GCCGGC 1 cut(s) 274
Ksp22I TGATCA 2 cut(s) 265, 2134
Kzo9I GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
LmnI GCTCC 6 cut(s) 164, 256, 731, 799, 1402, 1994
LweI GCATC 6 cut(s) 216, 234, 676, 1627, 1984, 2167
MaeI CTAG 2 cut(s) 1169, 1449
MaeII ACGT 4 cut(s) 852, 1542, 1971, 2023
MaeIII GTNAC 3 cut(s) 1492, 1832, 2010
MalI GATC 8 cut(s) 267, 330, 387, 629, 681, 1126, 1416, 2136
MbiI CCGCTC 1 cut(s) 1921
MboI GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
MfeI CAATTG 2 cut(s) 220, 912
MflI RGATCY 3 cut(s) 328, 1124, 1414
MhlI GDGCHC 5 cut(s) 161, 261, 748, 796, 1227
MlsI TGGCCA 1 cut(s) 1609
MluNI TGGCCA 1 cut(s) 1609
Mly113I GGCGCC 1 cut(s) 165
MlyI GAGTC 6 cut(s) 117, 606, 1755, 1804, 2047, 2056
MmeI TCCRAC 2 cut(s) 1289, 2075
Mox20I TGGCCA 1 cut(s) 1609
MroNI GCCGGC 1 cut(s) 272
MscI TGGCCA 1 cut(s) 1609
MseI TTAA 5 cut(s) 1037, 1097, 1349, 1383, 1566
MslI CAYNNNNRTG 2 cut(s) 1265, 1623
Msp20I TGGCCA 1 cut(s) 1609
MspA1I CMGCKG 1 cut(s) 737
MspI CCGG 7 cut(s) 162, 254, 273, 1025, 1419, 2057, 2089
MspR9I CCNGG 2 cut(s) 1026, 1419
MunI CAATTG 2 cut(s) 220, 912
Mva1269I GAATGC 4 cut(s) 53, 1772, 1819, 1832
MvnI CGCG 4 cut(s) 236, 605, 724, 807
NaeI GCCGGC 1 cut(s) 274
NarI GGCGCC 1 cut(s) 165
NciI CCSGG 2 cut(s) 1026, 1419
NdeI CATATG 1 cut(s) 838
NdeII GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
NgoMIV GCCGGC 1 cut(s) 272
NlaIII CATG 5 cut(s) 871, 907, 1066, 1300, 2141
NlaIV GGNNCC 8 cut(s) 128, 166, 795, 1344, 1416, 1423, 1739, 1932
NmuCI GTSAC 1 cut(s) 1492
NspV TTCGAA 1 cut(s) 1764
PagI TCATGA 1 cut(s) 903
PcsI WCGNNNNNNNCGW 2 cut(s) 1440, 1977
PctI GAATGC 4 cut(s) 53, 1772, 1819, 1832
PdiI GCCGGC 1 cut(s) 274
PfeI GAWTC 8 cut(s) 281, 338, 907, 949, 1066, 1317, 1766, 1942
PflFI GACNNNGTC 1 cut(s) 107
PfoI TCCNGGA 1 cut(s) 1024
PleI GAGTC 6 cut(s) 116, 605, 1754, 1803, 2047, 2055
PluTI GGCGCC 1 cut(s) 168
PpsI GAGTC 6 cut(s) 116, 605, 1754, 1803, 2047, 2055
Ppu21I YACGTR 2 cut(s) 1543, 1972
PshAI GACNNNNGTC 1 cut(s) 2057
PshBI ATTAAT 1 cut(s) 1566
PsiI TTATAA 1 cut(s) 674
Psp124BI GAGCTC 2 cut(s) 161, 261
PspFI CCCAGC 1 cut(s) 1471
PspN4I GGNNCC 8 cut(s) 128, 166, 795, 1344, 1416, 1423, 1739, 1932
PspPI GGNCC 4 cut(s) 580, 958, 1257, 2059
PsrI GAACNNNNNNTAC 2 cut(s) 1130, 1162
PstI CTGCAG 4 cut(s) 93, 703, 1132, 1327
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 3 cut(s) 328, 1124, 1414
PsyI GACNNNGTC 1 cut(s) 107
PvuII CAGCTG 1 cut(s) 737
RsaI GTAC 6 cut(s) 128, 309, 321, 487, 506, 1276
RsaNI GTAC 6 cut(s) 127, 308, 320, 486, 505, 1275
RseI CAYNNNNRTG 2 cut(s) 1265, 1623
SacI GAGCTC 2 cut(s) 161, 261
SalI GTCGAC 2 cut(s) 470, 599
SaqAI TTAA 5 cut(s) 1037, 1097, 1349, 1383, 1566
Sau3AI GATC 8 cut(s) 265, 328, 385, 627, 679, 1124, 1414, 2134
Sau96I GGNCC 4 cut(s) 580, 958, 1257, 2059
SchI GAGTC 6 cut(s) 117, 606, 1755, 1804, 2047, 2056
ScrFI CCNGG 2 cut(s) 1026, 1419
SduI GDGCHC 5 cut(s) 161, 261, 748, 796, 1227
SfaNI GCATC 6 cut(s) 216, 234, 676, 1627, 1984, 2167
SfcI CTRYAG 5 cut(s) 89, 699, 1128, 1323, 1790
SfoI GGCGCC 1 cut(s) 166
SfuI TTCGAA 1 cut(s) 1764
SinI GGWCC 2 cut(s) 1257, 2059
SmiMI CAYNNNNRTG 2 cut(s) 1265, 1623
SmlI CTYRAG 3 cut(s) 131, 1205, 1364
SmoI CTYRAG 3 cut(s) 131, 1205, 1364
SnaBI TACGTA 1 cut(s) 1543
SspDI GGCGCC 1 cut(s) 164
SspMI CTAG 2 cut(s) 1169, 1449
SstI GAGCTC 2 cut(s) 161, 261
StyD4I CCNGG 2 cut(s) 1024, 1417
StyI CCWWGG 3 cut(s) 1012, 1168, 1448
TaaI ACNGT 4 cut(s) 172, 1249, 1843, 1915
TaiI ACGT 4 cut(s) 855, 1545, 1974, 2026
TaqI TCGA 7 cut(s) 357, 471, 600, 642, 942, 1764, 1917
TaqII GACCGA 1 cut(s) 1625
TatI WGTACW 2 cut(s) 307, 504
TauI GCSGC 6 cut(s) 71, 88, 236, 290, 1601, 1813
TfiI GAWTC 8 cut(s) 281, 338, 907, 949, 1066, 1317, 1766, 1942
Tru1I TTAA 5 cut(s) 1037, 1097, 1349, 1383, 1566
Tru9I TTAA 5 cut(s) 1037, 1097, 1349, 1383, 1566
TscAI CASTG 1 cut(s) 352
TseFI GTSAC 1 cut(s) 1492
Tsp45I GTSAC 1 cut(s) 1492
TspGWI ACGGA 3 cut(s) 800, 1427, 1943
TspRI CASTG 1 cut(s) 352
Tth111I GACNNNGTC 1 cut(s) 107
VpaK11BI GGWCC 2 cut(s) 1257, 2059
VspI ATTAAT 1 cut(s) 1566
XapI RAATTY 5 cut(s) 7, 179, 1429, 1781, 2066
XmaJI CCTAGG 2 cut(s) 1168, 1448
XmiI GTMKAC 4 cut(s) 111, 441, 471, 600
XspI CTAG 2 cut(s) 1169, 1449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.