Rh6AG332700

CSC1-like protein At4g02900

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0010682
Physical Location & Seq
Forward (+)
53390483 .. 53395609
5127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG332700.1

Sequence Viewer

Length: 1992 bp
ATGGCGGATCTTCTAGAAATCTTGACGTCAGCAGGTATTAACCTGGCGACAGCATTGGGGTTCCTTGTGGCGTTTGCTTTGCTGCGGCTTCAGCCAATCAACGACAGAGTCTACTTCCCGAAATGGTACCGAAAAGGGATCAGAGGGAGCCCGACGAGCTCCGGGACTTTTGCCAAGAGGTTTGTCAACTTGGATGCCATGACCTACATCAAGTTTCTGAATTGGATGCCTGCAGCACTGAGGATGCCGGAGCCTGAGCTCATTGATCACGCCGGGCTAGACTCTGCTGCCTACATTCGGATTTATGTACTTGGCTTGAAGATATTCTTCCCCATTACTGTTCTTTCACTTGCGGTTTTGATTCCTCTCAATTACACGAACGACACGCTGGAAAAATCCAAGGAAGTAGAATACAGCGACATTGATAAAATCTCGATATCCAATGTCCCTACTGCATCTCTTAAGTTCATTGGACATCTCATATTGTCTTATGTCTTCTCAATTTGGACGTGCTTTGTTTTATACCACGAGTACAAGACAGTTGCTACTAAAAGGCTTCAATTTTTAGCATCTCAAAAACGCCGTCCAGATCAATTTTCGGTTCTTGTGAGGAATGTACCGCCAGATCCTGATGAATCAGTCAGTGAGCATATCGAACACTTCTTTTGCGTAAACCATCCCAACGACTATCTTACACATCAAGTTGTATATAATACAAATAAACTTGCAAAGTTGGTTGCACAGAAGAAGAGTTTGAAAAATAGGTTTGTGTACTACCAAAATAAGTATGAGAGAAATCCAGAGAAATCAAGGCCTACTACAAAGACAGGTTTCTTGGGCCTGTTAGGAGACAAAGTGGACGCAATTGATTACTACACAACTGAGATTGAAAAGTTGAGCGAAGAAGAGAAAAAAGAAAGAGAAAGAGTTGCGAGTGATCCTGAAGCCATAATGCCAGCAGCATTTGTTTCATTCAAATCGCGATGGGGAGCAGCTGTATGTGCTCAAACTCAGCAATCAAGTAATGCTACCATCTGGTTGACAGAGTGGGCTCCTGAGCCACGTGACATCTATTGGAGAAATCTTTCAATTCCATACGTTGAACTCAATGTGCGGAAACTGCTCATGGCTGTTGCTTTCTTTGTTCTCATTTCCTTTTTTATGATTCCAATAGCATTCGTCCAAACTCTAGCCAACATTGACAATCTTAAGAAGGCCCTTCCTTTCTTGAAGCCAATAATAGAGAAGAAGCAAGTTAAGTCTGTCATCCAAGGATTTCTTCCAGGAATTGCATTGAAGATATTCCTTGCTATACTTCCTATGATTCTAATGTTCATGTCAAAGATAGAGGGTTATACATCACTCTCATCTCTGGATAGGAGATCTGCTGCGAAGTATTATTTATTCATACTTATCAATATGTTTCTGGGAAATATTGTTGCAGGAACAGCATTTGAGCAGCTTGAGGAATTTACTAGCCAGGCCTCATCAGAATATTTAAAAACTATTGGGAGGACCATGCCAATGAAAGGCACATTTTTCATCACTTATATAATGGTTGATGGTTGGAGTGGAATTGCTGCAGAAATCATCAGATTGGTTCCGCTAGCTCTATACCACTTCAAAAACACATTTTTGGTTAAGACAGAGCAAGATAGGGAGGAAGCAATGAATCCTGGTTCCTTGGCATTTGCTACAAATGAACCTAGAATACAGTTCTATATGTTGCTGGGCCTTGTATATTCTGTTGTCACTCCTTTGCTTCTTCCATTTATTCTTATCTTCTTTGCTTTTGCCTACGTGGTTTTCCGTCACCAGGTGGGTTATACTACTTCTCAGTCAGGCTCAAAATTCTGGTCTATCATCTTCTGCTTATCTCATTGTTTACATGTTACTAATCGTTTTTGTCCCCTTCTTGCCAGATTATTAATGTCTATGATCAGAAATATGAGAGTGGTGCAGCCTTTTGGCCGCGTGTGCATATGCGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

663

Amino Acids

75.79

Weight (kDa)

9.27

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 7 - 177 8.3e-39 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 198 - 361 4.4e-49 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 372 - 623 8.2e-71 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010682)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02900 AT4G02900 AT4G02900 AT4G02900
fragaria_vesca FvH4_2g23940 FvH4_2g23940
malus_domestica MD11G1289500.v1.1
prunus_persica Prupe.8G244700_v2.0.a1 Prupe.8G244700_v2.0.a1
pyrus_communis pycom11g25690
rosa_chinensis RchiOBHm_Chr6g0291571
rosa_laevigata RLG00000012106
rosa_roxburghii Rroxscaffold_7G00175960
rosa_rugosa Rorug06G0220300 Rorug06G0220400 Rorug06G0220400
rosa_samantha Rh6AG332700 Rh6CG345900 Rh6DG333100
rosa_wichuraiana Rw6G028890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 29
Acc36I ACCTGC 1 cut(s) 23
Acc65I GGTACC 1 cut(s) 126
AccB1I GGYRCC 1 cut(s) 126
AccI GTMKAC 1 cut(s) 111
AccII CGCG 2 cut(s) 982, 1974
AciI CCGC 7 cut(s) 5, 85, 353, 620, 1114, 1604, 1972
AclWI GGATC 4 cut(s) 15, 146, 620, 932
AcoI YGGCCR 1 cut(s) 1969
AcsI RAATTY 2 cut(s) 1469, 1850
AcuI CTGAAG 2 cut(s) 74, 963
AcvI CACGTG 1 cut(s) 1064
AcyI GRCGYC 1 cut(s) 26
AdeI CACNNNGTG 1 cut(s) 1819
AfaI GTAC 5 cut(s) 128, 309, 533, 618, 773
AfiI CCNNNNNNNGG 3 cut(s) 297, 1529, 1816
AflII CTTAAG 2 cut(s) 461, 1208
AflIII ACRYGT 1 cut(s) 1888
AjiI CACGTC 1 cut(s) 510
AjnI CCWGG 5 cut(s) 42, 1282, 1479, 1675, 1815
AjuI GAANNNNNNNTTGG 2 cut(s) 1263, 1295
AluBI AGCT 5 cut(s) 159, 259, 995, 1462, 1610
AluI AGCT 5 cut(s) 159, 259, 995, 1462, 1610
Alw21I GWGCWC 3 cut(s) 161, 261, 1006
Alw26I GTCTC 1 cut(s) 843
AlwI GGATC 4 cut(s) 15, 146, 620, 932
AlwNI CAGNNNCTG 1 cut(s) 629
AoxI GGCC 6 cut(s) 812, 838, 1215, 1482, 1732, 1969
ApeKI GCWGC 9 cut(s) 82, 233, 287, 959, 992, 1388, 1459, 1580, 1960
ApoI RAATTY 2 cut(s) 1469, 1850
ArsI GACNNNNNNTTYG 4 cut(s) 568, 600, 1841, 1873
AseI ATTAAT 1 cut(s) 1928
Asp700I GAANNNNTTC 3 cut(s) 323, 1084, 1301
Asp718I GGTACC 1 cut(s) 126
AspS9I GGNCC 4 cut(s) 838, 1216, 1515, 1732
AsuC2I CCSGG 2 cut(s) 163, 274
AsuHPI GGTGA 1 cut(s) 1805
AsuNHI GCTAGC 1 cut(s) 1606
AvaII GGWCC 1 cut(s) 1515
BanI GGYRCC 1 cut(s) 126
BanII GRGCYC 4 cut(s) 152, 161, 261, 1054
BauI CACGAG 1 cut(s) 527
BbrPI CACGTG 1 cut(s) 1064
BbsI GAAGAC 1 cut(s) 487
Bbv12I GWGCWC 3 cut(s) 161, 261, 1006
BbvI GCAGC 9 cut(s) 69, 245, 274, 971, 1004, 1375, 1471, 1567, 1972
BccI CCATC 4 cut(s) 684, 978, 1040, 1556
BceAI ACGGC 1 cut(s) 567
BciT130I CCWGG 5 cut(s) 44, 1284, 1481, 1677, 1817
BclI TGATCA 2 cut(s) 265, 1938
BcnI CCSGG 2 cut(s) 163, 274
BcoDI GTCTC 1 cut(s) 843
BfaI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
BfmI CTRYAG 2 cut(s) 231, 1581
BfrI CTTAAG 2 cut(s) 461, 1208
BfuAI ACCTGC 1 cut(s) 23
BglII AGATCT 1 cut(s) 1382
Bme1390I CCNGG 7 cut(s) 44, 163, 274, 1284, 1481, 1677, 1817
Bme18I GGWCC 1 cut(s) 1515
BmgBI CACGTC 1 cut(s) 510
BmgT120I GGNCC 4 cut(s) 838, 1216, 1515, 1732
BmiI GGNNCC 7 cut(s) 62, 128, 149, 252, 1053, 1602, 1681
BmrFI CCNGG 7 cut(s) 44, 163, 274, 1284, 1481, 1677, 1817
BmsI GCATC 5 cut(s) 184, 216, 234, 464, 578
BmtI GCTAGC 1 cut(s) 1610
BpiI GAAGAC 1 cut(s) 487
Bpu10I CCTNAGC 2 cut(s) 255, 1056
BpuEI CTTGAG 1 cut(s) 1484
BpuMI CCSGG 2 cut(s) 163, 274
BsaAI YACGTR 2 cut(s) 1064, 1801
BsaHI GRCGYC 1 cut(s) 26
BsaJI CCNNGG 3 cut(s) 399, 1270, 1683
BsaXI ACNNNNNCTCC 4 cut(s) 840, 870, 981, 1011
Bsc4I CCNNNNNNNGG 3 cut(s) 297, 1529, 1816
Bse3DI GCAATG 1 cut(s) 1674
BseBI CCWGG 5 cut(s) 44, 1284, 1481, 1677, 1817
BseDI CCNNGG 3 cut(s) 399, 1270, 1683
BseGI GGATG 5 cut(s) 199, 231, 249, 676, 1266
BseLI CCNNNNNNNGG 3 cut(s) 297, 1529, 1816
BseMI GCAATG 1 cut(s) 1674
BseMII CTCAG 6 cut(s) 230, 246, 873, 1025, 1047, 1850
BseXI GCAGC 9 cut(s) 69, 245, 274, 971, 1004, 1375, 1471, 1567, 1972
BseYI CCCAGC 1 cut(s) 1729
BsgI GTGCAG 1 cut(s) 1979
Bsh1236I CGCG 2 cut(s) 982, 1974
BshFI GGCC 6 cut(s) 814, 840, 1217, 1484, 1734, 1971
BshNI GGYRCC 1 cut(s) 126
BsiHKAI GWGCWC 3 cut(s) 161, 261, 1006
BsiSI CCGG 3 cut(s) 162, 248, 273
BslFI GGGAC 3 cut(s) 178, 431, 1893
BslI CCNNNNNNNGG 3 cut(s) 297, 1529, 1816
BsmAI GTCTC 1 cut(s) 843
BsmFI GGGAC 3 cut(s) 178, 431, 1893
BsmI GAATGC 1 cut(s) 1175
BsnI GGCC 6 cut(s) 814, 840, 1217, 1484, 1734, 1971
Bsp1286I GDGCHC 5 cut(s) 152, 161, 261, 1006, 1054
Bsp143I GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1938
Bsp68I TCGCGA 1 cut(s) 982
BspACI CCGC 7 cut(s) 5, 85, 353, 620, 1114, 1604, 1972
BspANI GGCC 6 cut(s) 814, 840, 1217, 1484, 1734, 1971
BspCNI CTCAG 6 cut(s) 231, 247, 874, 1024, 1048, 1849
BspFNI CGCG 2 cut(s) 982, 1974
BspLI GGNNCC 7 cut(s) 62, 128, 149, 252, 1053, 1602, 1681
BspMAI CTGCAG 2 cut(s) 235, 1585
BspMI ACCTGC 1 cut(s) 23
BspOI GCTAGC 1 cut(s) 1610
BspPI GGATC 4 cut(s) 15, 146, 620, 932
BspT107I GGYRCC 1 cut(s) 126
BspTI CTTAAG 2 cut(s) 461, 1208
BsrDI GCAATG 1 cut(s) 1674
BssECI CCNNGG 3 cut(s) 399, 1270, 1683
BssMI GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1938
BssNI GRCGYC 1 cut(s) 26
BssSI CACGAG 1 cut(s) 527
BssT1I CCWWGG 3 cut(s) 399, 1270, 1683
Bst2BI CACGAG 1 cut(s) 527
Bst2UI CCWGG 5 cut(s) 44, 1284, 1481, 1677, 1817
Bst4CI ACNGT 3 cut(s) 340, 541, 1716
Bst6I CTCTTC 2 cut(s) 743, 900
BstACI GRCGYC 1 cut(s) 26
BstAFI CTTAAG 2 cut(s) 461, 1208
BstBAI YACGTR 2 cut(s) 1064, 1801
BstC8I GCNNGC 3 cut(s) 231, 957, 1608
BstDEI CTNAG 6 cut(s) 239, 255, 882, 1011, 1056, 1836
BstF5I GGATG 5 cut(s) 199, 231, 249, 676, 1266
BstFNI CGCG 2 cut(s) 982, 1974
BstKTI GATC 8 cut(s) 10, 141, 268, 592, 628, 940, 1385, 1941
BstMAI GTCTC 1 cut(s) 843
BstMBI GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1938
BstMWI GCNNNNNNNGC 6 cut(s) 91, 156, 1001, 1120, 1448, 1977
BstNI CCWGG 5 cut(s) 44, 1284, 1481, 1677, 1817
BstNSI RCATGY 1 cut(s) 1892
BstSCI CCNGG 7 cut(s) 42, 161, 272, 1282, 1479, 1675, 1815
BstSFI CTRYAG 2 cut(s) 231, 1581
BstUI CGCG 2 cut(s) 982, 1974
BstV1I GCAGC 9 cut(s) 69, 245, 274, 971, 1004, 1375, 1471, 1567, 1972
BstV2I GAAGAC 1 cut(s) 487
BstX2I RGATCY 3 cut(s) 7, 625, 1382
BstYI RGATCY 3 cut(s) 7, 625, 1382
BsuRI GGCC 6 cut(s) 814, 840, 1217, 1484, 1734, 1971
BtgZI GCGATG 1 cut(s) 997
BtrI CACGTC 1 cut(s) 510
BtsCI GGATG 5 cut(s) 199, 231, 249, 676, 1266
BtsIMutI CAGTG 2 cut(s) 236, 649
BtuMI TCGCGA 1 cut(s) 982
BveI ACCTGC 1 cut(s) 23
Cac8I GCNNGC 3 cut(s) 231, 957, 1608
CaiI CAGNNNCTG 1 cut(s) 629
Cfr13I GGNCC 4 cut(s) 838, 1216, 1515, 1732
CseI GACGC 1 cut(s) 869
CsiI ACCWGGT 1 cut(s) 1815
Csp6I GTAC 5 cut(s) 127, 308, 532, 617, 772
CviAII CATG 5 cut(s) 199, 1126, 1336, 1519, 1889
CviQI GTAC 5 cut(s) 127, 308, 532, 617, 772
DdeI CTNAG 6 cut(s) 239, 255, 882, 1011, 1056, 1836
DpnI GATC 8 cut(s) 9, 140, 267, 591, 627, 939, 1384, 1940
DpnII GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1938
DraI TTTAAA 1 cut(s) 1500
DraIII CACNNNGTG 1 cut(s) 1819
EaeI YGGCCR 1 cut(s) 1969
Eam1104I CTCTTC 2 cut(s) 743, 900
EarI CTCTTC 2 cut(s) 743, 900
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 159, 259
Eco130I CCWWGG 3 cut(s) 399, 1270, 1683
Eco147I AGGCCT 2 cut(s) 814, 1484
Eco24I GRGCYC 4 cut(s) 152, 161, 261, 1054
Eco32I GATATC 1 cut(s) 438
Eco47I GGWCC 1 cut(s) 1515
Eco53kI GAGCTC 2 cut(s) 159, 259
Eco57I CTGAAG 2 cut(s) 74, 963
Eco72I CACGTG 1 cut(s) 1064
EcoICRI GAGCTC 2 cut(s) 159, 259
EcoO109I RGGNCCY 1 cut(s) 1216
EcoRII CCWGG 5 cut(s) 42, 1282, 1479, 1675, 1815
EcoRV GATATC 1 cut(s) 438
EcoT14I CCWWGG 3 cut(s) 399, 1270, 1683
EcoT38I GRGCYC 4 cut(s) 152, 161, 261, 1054
ErhI CCWWGG 3 cut(s) 399, 1270, 1683
FaeI CATG 5 cut(s) 202, 1129, 1339, 1522, 1892
FalI AAGNNNNNCTT 4 cut(s) 311, 343, 1263, 1295
FaqI GGGAC 3 cut(s) 178, 431, 1893
FatI CATG 5 cut(s) 198, 1125, 1335, 1518, 1888
FauNDI CATATG 1 cut(s) 1982
FbaI TGATCA 2 cut(s) 265, 1938
FblI GTMKAC 1 cut(s) 111
FokI GGATG 5 cut(s) 206, 238, 256, 663, 1253
FriOI GRGCYC 4 cut(s) 152, 161, 261, 1054
FspBI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
GsaI CCCAGC 1 cut(s) 1733
HaeIII GGCC 6 cut(s) 814, 840, 1217, 1484, 1734, 1971
HapII CCGG 3 cut(s) 162, 248, 273
HgaI GACGC 1 cut(s) 869
Hin1I GRCGYC 1 cut(s) 26
Hin1II CATG 5 cut(s) 202, 1129, 1339, 1522, 1892
HincII GTYRAC 2 cut(s) 187, 1041
HindII GTYRAC 2 cut(s) 187, 1041
HinfI GANTC 7 cut(s) 108, 281, 361, 635, 1165, 1324, 1672
HpaII CCGG 3 cut(s) 162, 248, 273
HphI GGTGA 1 cut(s) 1805
Hpy166II GTNNAC 7 cut(s) 112, 187, 673, 772, 859, 1041, 1886
Hpy188I TCNGA 6 cut(s) 143, 219, 300, 1492, 1595, 1943
Hpy8I GTNNAC 7 cut(s) 112, 187, 673, 772, 859, 1041, 1886
Hpy99I CGWCG 1 cut(s) 157
HpyAV CCTTC 3 cut(s) 1207, 1229, 1922
HpyCH4III ACNGT 3 cut(s) 340, 541, 1716
HpyCH4IV ACGT 5 cut(s) 26, 509, 1063, 1098, 1800
HpyCH4V TGCA 9 cut(s) 233, 455, 728, 740, 1292, 1442, 1583, 1960, 1980
HpyF10VI GCNNNNNNNGC 6 cut(s) 91, 156, 1001, 1120, 1448, 1977
HpyF3I CTNAG 6 cut(s) 239, 255, 882, 1011, 1056, 1836
HpySE526I ACGT 5 cut(s) 26, 509, 1063, 1098, 1800
Hsp92I GRCGYC 1 cut(s) 26
Hsp92II CATG 5 cut(s) 202, 1129, 1339, 1522, 1892
KpnI GGTACC 1 cut(s) 130
Ksp22I TGATCA 2 cut(s) 265, 1938
Kzo9I GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1938
LmnI GCTCC 5 cut(s) 147, 164, 250, 989, 1057
Lsp1109I GCAGC 9 cut(s) 69, 245, 274, 971, 1004, 1375, 1471, 1567, 1972
LweI GCATC 5 cut(s) 184, 216, 234, 464, 578
MabI ACCWGGT 1 cut(s) 1815
MaeI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
MaeII ACGT 5 cut(s) 26, 509, 1063, 1098, 1800
MaeIII GTNAC 4 cut(s) 1064, 1750, 1811, 1891
MalI GATC 8 cut(s) 9, 140, 267, 591, 627, 939, 1384, 1940
MboI GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1938
MfeI CAATTG 1 cut(s) 864
MflI RGATCY 3 cut(s) 7, 625, 1382
MhlI GDGCHC 5 cut(s) 152, 161, 261, 1006, 1054
MlyI GAGTC 2 cut(s) 117, 275
MmeI TCCRAC 1 cut(s) 1547
MroXI GAANNNNTTC 3 cut(s) 323, 1084, 1301
MseI TTAA 7 cut(s) 39, 462, 1209, 1257, 1499, 1641, 1928
MslI CAYNNNNRTG 2 cut(s) 1523, 1985
MspA1I CMGCKG 1 cut(s) 995
MspCI CTTAAG 2 cut(s) 461, 1208
MspI CCGG 3 cut(s) 162, 248, 273
MspR9I CCNGG 7 cut(s) 44, 163, 274, 1284, 1481, 1677, 1817
MunI CAATTG 1 cut(s) 864
Mva1269I GAATGC 1 cut(s) 1175
MvaI CCWGG 5 cut(s) 44, 1284, 1481, 1677, 1817
MvnI CGCG 2 cut(s) 982, 1974
MwoI GCNNNNNNNGC 6 cut(s) 91, 156, 1001, 1120, 1448, 1977
NciI CCSGG 2 cut(s) 163, 274
NdeI CATATG 1 cut(s) 1982
NdeII GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1938
NheI GCTAGC 1 cut(s) 1606
NlaIII CATG 5 cut(s) 202, 1129, 1339, 1522, 1892
NlaIV GGNNCC 7 cut(s) 62, 128, 149, 252, 1053, 1602, 1681
NmuCI GTSAC 3 cut(s) 1064, 1750, 1811
NruI TCGCGA 1 cut(s) 982
NspI RCATGY 1 cut(s) 1892
PceI AGGCCT 2 cut(s) 814, 1484
PciI ACATGT 1 cut(s) 1888
PctI GAATGC 1 cut(s) 1175
PdmI GAANNNNTTC 3 cut(s) 323, 1084, 1301
PfeI GAWTC 5 cut(s) 361, 635, 1165, 1324, 1672
PflFI GACNNNGTC 1 cut(s) 107
PfoI TCCNGGA 2 cut(s) 161, 1282
PleI GAGTC 2 cut(s) 116, 275
PmaCI CACGTG 1 cut(s) 1064
PmlI CACGTG 1 cut(s) 1064
PpsI GAGTC 2 cut(s) 116, 275
Ppu21I YACGTR 2 cut(s) 1064, 1801
PscI ACATGT 1 cut(s) 1888
PshBI ATTAAT 1 cut(s) 1928
Psp124BI GAGCTC 2 cut(s) 161, 261
Psp6I CCWGG 5 cut(s) 42, 1282, 1479, 1675, 1815
PspCI CACGTG 1 cut(s) 1064
PspFI CCCAGC 1 cut(s) 1729
PspGI CCWGG 5 cut(s) 42, 1282, 1479, 1675, 1815
PspN4I GGNNCC 7 cut(s) 62, 128, 149, 252, 1053, 1602, 1681
PspPI GGNCC 4 cut(s) 838, 1216, 1515, 1732
PsrI GAACNNNNNNTAC 2 cut(s) 1695, 1727
PstI CTGCAG 2 cut(s) 235, 1585
PstNI CAGNNNCTG 1 cut(s) 629
PsuI RGATCY 3 cut(s) 7, 625, 1382
PsyI GACNNNGTC 1 cut(s) 107
PvuII CAGCTG 1 cut(s) 995
RruI TCGCGA 1 cut(s) 982
RsaI GTAC 5 cut(s) 128, 309, 533, 618, 773
RsaNI GTAC 5 cut(s) 127, 308, 532, 617, 772
RseI CAYNNNNRTG 2 cut(s) 1523, 1985
SacI GAGCTC 2 cut(s) 161, 261
SaqAI TTAA 7 cut(s) 39, 462, 1209, 1257, 1499, 1641, 1928
Sau3AI GATC 8 cut(s) 7, 138, 265, 589, 625, 937, 1382, 1938
Sau96I GGNCC 4 cut(s) 838, 1216, 1515, 1732
SchI GAGTC 2 cut(s) 117, 275
ScrFI CCNGG 7 cut(s) 44, 163, 274, 1284, 1481, 1677, 1817
SduI GDGCHC 5 cut(s) 152, 161, 261, 1006, 1054
SexAI ACCWGGT 1 cut(s) 1815
SfaNI GCATC 5 cut(s) 184, 216, 234, 464, 578
SfcI CTRYAG 2 cut(s) 231, 1581
SinI GGWCC 1 cut(s) 1515
SmiMI CAYNNNNRTG 2 cut(s) 1523, 1985
SmlI CTYRAG 3 cut(s) 461, 1208, 1463
SmoI CTYRAG 3 cut(s) 461, 1208, 1463
SseBI AGGCCT 2 cut(s) 814, 1484
SsiI CCGC 7 cut(s) 5, 85, 353, 620, 1114, 1604, 1972
SspI AATATT 2 cut(s) 1435, 1496
SspMI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
SstI GAGCTC 2 cut(s) 161, 261
StuI AGGCCT 2 cut(s) 814, 1484
StyD4I CCNGG 7 cut(s) 42, 161, 272, 1282, 1479, 1675, 1815
StyI CCWWGG 3 cut(s) 399, 1270, 1683
TaaI ACNGT 3 cut(s) 340, 541, 1716
TaiI ACGT 5 cut(s) 29, 512, 1066, 1101, 1803
TaqI TCGA 2 cut(s) 434, 654
TatI WGTACW 3 cut(s) 307, 531, 771
TauI GCSGC 2 cut(s) 88, 1974
TfiI GAWTC 5 cut(s) 361, 635, 1165, 1324, 1672
Tru1I TTAA 7 cut(s) 39, 462, 1209, 1257, 1499, 1641, 1928
Tru9I TTAA 7 cut(s) 39, 462, 1209, 1257, 1499, 1641, 1928
TscAI CASTG 2 cut(s) 243, 649
TseFI GTSAC 3 cut(s) 1064, 1750, 1811
TseI GCWGC 9 cut(s) 82, 233, 287, 959, 992, 1388, 1459, 1580, 1960
Tsp45I GTSAC 3 cut(s) 1064, 1750, 1811
TspDTI ATGAA 9 cut(s) 457, 648, 960, 1324, 1396, 1531, 1541, 1685, 1716
TspGWI ACGGA 1 cut(s) 1799
TspRI CASTG 2 cut(s) 243, 649
Tth111I GACNNNGTC 1 cut(s) 107
Vha464I CTTAAG 2 cut(s) 461, 1208
VpaK11BI GGWCC 1 cut(s) 1515
VspI ATTAAT 1 cut(s) 1928
XapI RAATTY 2 cut(s) 1469, 1850
XbaI TCTAGA 1 cut(s) 13
XceI RCATGY 1 cut(s) 1892
XmiI GTMKAC 1 cut(s) 111
XmnI GAANNNNTTC 3 cut(s) 323, 1084, 1301
XspI CTAG 6 cut(s) 14, 278, 1190, 1476, 1607, 1707
ZraI GACGTC 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.