Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0011851

Physical Location & Seq

Genomic Coordinates Forward (+)

21802575 .. 21808330

Gene Structure 5756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g27470.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGAAGATGGTGTGGTTTATTCTGTGTGGATTTGCATTGTTGTTTATGAACCCGGGAACCTCTCTCGCCGGCGTCAACAACAACGTCATGTACGATGGCCGGTCTCTGATAATCGACGGTCAGCATAAGATTCTCTTCTCCGGTTCCATTCATTACCCCAGAAGCACTCCTCAGATGTGGCCATCTCTGATAGCCAAAGCCAAAGAAGGGGGAATAGATGTGATACAAACATACGTGTTTTGGAACCTTCATGAACCCCAGAAAGGACAGTTTGTTTTCAATGGAAGAAGTGACATAGTTGCTTTTATGAAGGAAGTGCACAGACAAGGCCTATATGTGTGCCTTAGGATTGGACCCTTCATTGAGAGTGAATGGACTTATGGTGGTTTTCCGGTTTGGTTAAGGAACATTCCGGGCATCGTCTTCCGGTCTGATAATGAACCGTACAAGGCTGAAATGCAGAGGTTTACAGCAAAAATAGTAGACCTGATGAAATCAAATGAACTGTATGCTTCACAAGGTGGACCGATTATATTGTCACAGATTGAGAACGAGTACAAAAATGTCGAATCGGCCTTTCATGAAAGGGGACCTCCTTATGTTCTGTGGGCTGCATCCATGGCGGAAGGCTTTCAAACTGGTGTGCCCTGGGTTATGTGCAAGCAAGACGATGCTCCCGGCGCTGTGATCAATGCATGTAATGGAATGAAGTGTGGAGAAACCTTTGCTGGCCCAAATGCCCCTAACAAGCCAGCAATTTGGACAGAGGACTGGACAAGCCAATACCAAGTATATGGGGATGAACCATACCTCAGAAGAGCTGAAGATATTGCCTATCATGTTGCACTCTTTATTGCAAAGAATAAAGGAAGCTATGTAAACTACTACATGTATCATGGAGGAACCAATTTCGGAAGAACAGCCTCTGAGTTTGTGACTACCAGTTATTATGATGAAGCTCCTCTTGATGAGTATGGTATGCCAAATGAACCAAAATATAGTCATCTCAAGGAATTGCATGCCGCAGTGAAGTTGTCCATCAGTCCTCTACTTGCTGGAGAGCAAACCGTTGTCAATTTGGGTCAATCTCAAACTGCGTATGTCTACAAAGTTAAATCTGGAGAGTGTGCTGCTTTCCTGGTGAACAATGGCTCTAAAGATGCTATTGTCCAATTTCAGAACTCTCCTTATCAATTGTATCCAAAGTCGATTAGTATCTTACCAGACTGTAAAAGCGTAGCTTTTAACACTGGAAAGGTAAGCGCACAACATGCTACAAGATCATGGACACCAACTCAAAAGTTTGATTCACATCAGAATTGGCAAGAGTACAATGAACCCATTCCCACTTATGACAACACCTCTCTACGGCAAAACATAATAGTAGACCAAATGAGAACTACAAATGATCTTTCTGATTATCTGTGGTACACTTTCAGCTTTCAGCATGACTCTCCTAATCCAGAATCCACATTAAACGTGCAAACACACGGACATGTCTTGCATTCATTCGTAAATGGAGTACTTGTAGGATCTGGACATGGAGTGCACAGGAATGCAGGTTTTGCCTTGGAGAGTAAGGTTAATCTGAATAAGGGGATAAACCATGTCTCCCTACTAAGTGCAATGGTTGGACTGCCGGACAATGGAGCATATCTAGAGCGTAGAGATTATGGATTACATAGTGTGAAGATTGACGGTAAAGATTTCAGCACATATGCATGGGGATATCAGGTTGGGTTGTCTGGCGAGAACTTACAAATCTATACAGACACAAGTAAAGTTCAGTGGCATAGATTAAGCTCTACAAAACATCCCATGACATGGTATAAGACTTTATTTGATGCACCAGCAGGAAATGACCCTGTTGCATTAAATCTTGGTTCCATGGGAAAAGGTGAAGTTTGGATCAATGGTCAAAGCATTGGTCGATACTGGGTCTCCTTCCACACCCCGAAAGGGACTCCTTCACAGACATGGTATCATGTTCCTCGATCTTTTCTGAAGCCTACTGGCAACTTGTTAGTTCTCATTGAAGAAGAAACTGGCGTCGACCCGGTTAAGATATCTCTGGACAGAATTTCAGTAGCGAAAGTGTGTGCGCTTGTGTCTGAAACACATTTACACCCAGTGAGCACATGGATGTATCAGAGGACTAGTGGGAACCTGAACAACACAAGACAGAACCCCGGCAGAAAGCCAACAGCGAAACTCAGGTGTCCTCCAAATAGCTACATTTCCAAAATCTTATATGCAAGCTATGGCAATCCTTCCGGTGATTGTAAAACTTATGCCGCCGGAAGCTGCCATTCAGAGGACTCTACAGCAGTTGTACAGAAGGCTTGCCTGGGCAAGAGGAGATGCTCGGTCTCGGTATCAAGTGAGAAGTTTGGTGATCCATGCCCAAGAATCAGCAAAACGTTGTTGGTTGATGCGCAATGTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

816

Amino Acids

90.99

Weight (kDa)

8.02

Isoelectric Point (pI)

37.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	35 - 342	1.2e-112	Glycosyl hydrolases family 35
Glyco_hydro_42	PF02449	58 - 192	3.6e-06	Beta-galactosidase
GHD	PF17834	365 - 420	2.6e-21	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	607 - 673	2.4e-25	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	738 - 814	2.7e-20	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011851)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77410 AT1G77410 AT1G77410 AT1G77410
fragaria_vesca	FvH4_2g27470
prunus_persica	Prupe.1G492800_v2.0.a1 Prupe.1G492800_v2.0.a1 Prupe.1G492800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0296311
rosa_laevigata	RLG00000011707
rosa_multiflora	Rmu_sc0001478.1_g000001 Rmu_sc0004708.1_g000001 Rmu_sc0012554.1_g000001
rosa_roxburghii	Rroxscaffold_7G00171640 Rroxscaffold_7G00178440
rosa_rugosa	Rorug06G0261000
rosa_samantha	Rh6BG380800 Rh6CG386000
rosa_wichuraiana	Rw6G032490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2436
Acc36I	ACCTGC	1 cut(s)	1550
AccB7I	CCANNNNNTGG	1 cut(s)	1824
AccI	GTMKAC	4 cut(s)	483, 1104, 1386, 2052
AciI	CCGC	3 cut(s)	623, 1023, 2295
AclI	AACGTT	1 cut(s)	2420
AclWI	GGATC	3 cut(s)	1540, 1916, 2390
AcoI	YGGCCR	2 cut(s)	97, 179
AcsI	RAATTY	1 cut(s)	2079
AcuI	CTGAAG	2 cut(s)	843, 2024
AcyI	GRCGYC	2 cut(s)	72, 2049
AdeI	CACNNNGTG	2 cut(s)	521, 2131
AfaI	GTAC	7 cut(s)	92, 446, 557, 1331, 1430, 1524, 2334
AfiI	CCNNNNNNNGG	7 cut(s)	207, 263, 1368, 1646, 1824, 1959, 2314
AflIII	ACRYGT	3 cut(s)	234, 888, 1495
AgsI	TTSAA	3 cut(s)	280, 635, 2036
AhlI	ACTAGT	1 cut(s)	2156
AjnI	CCWGG	3 cut(s)	647, 1137, 2346
AluBI	AGCT	9 cut(s)	821, 873, 959, 1241, 1440, 1803, 2232, 2259, 2304
AluI	AGCT	9 cut(s)	821, 873, 959, 1241, 1440, 1803, 2232, 2259, 2304
Alw21I	GWGCWC	3 cut(s)	321, 1551, 2138
Alw26I	GTCTC	4 cut(s)	108, 1615, 1945, 2374
Alw44I	GTGCAC	2 cut(s)	317, 1547
AlwI	GGATC	3 cut(s)	1540, 1916, 2390
AlwNI	CAGNNNCTG	1 cut(s)	926
Ama87I	CYCGRG	1 cut(s)	52
AoxI	GGCC	5 cut(s)	97, 179, 328, 573, 730
ApaLI	GTGCAC	2 cut(s)	317, 1547
ApeKI	GCWGC	3 cut(s)	611, 1130, 2304
ApoI	RAATTY	1 cut(s)	2079
ArsI	GACNNNNNNTTYG	2 cut(s)	1912, 1944
Asp700I	GAANNNNTTC	2 cut(s)	630, 1341
AspLEI	GCGC	4 cut(s)	683, 1265, 2104, 2437
AspS9I	GGNCC	4 cut(s)	353, 524, 590, 731
AsuC2I	CCSGG	6 cut(s)	53, 54, 414, 678, 2057, 2190
AsuHPI	GGTGA	4 cut(s)	1153, 1910, 2288, 2405
AvaI	CYCGRG	1 cut(s)	52
AvaII	GGWCC	3 cut(s)	353, 524, 590
AxyI	CCTNAGG	1 cut(s)	344
BaeGI	GKGCMC	3 cut(s)	321, 648, 1551
BalI	TGGCCA	1 cut(s)	181
BbsI	GAAGAC	1 cut(s)	415
Bbv12I	GWGCWC	3 cut(s)	321, 1551, 2138
BbvI	GCAGC	3 cut(s)	598, 1117, 2291
BccI	CCATC	3 cut(s)	89, 190, 1046
BceAI	ACGGC	1 cut(s)	1385
BciT130I	CCWGG	3 cut(s)	649, 1139, 2348
BciVI	GTATCC	1 cut(s)	1209
BclI	TGATCA	1 cut(s)	687
BcnI	CCSGG	6 cut(s)	53, 54, 414, 678, 2057, 2190
BcoDI	GTCTC	4 cut(s)	108, 1615, 1945, 2374
BcuI	ACTAGT	1 cut(s)	2156
BfaI	CTAG	2 cut(s)	1658, 2157
BfmI	CTRYAG	1 cut(s)	2322
BfoI	RGCGCY	1 cut(s)	684
BfuAI	ACCTGC	1 cut(s)	1550
BfuI	GTATCC	1 cut(s)	1209
BisI	GCNGC	5 cut(s)	612, 1023, 1131, 2295, 2305
BlsI	GCNGC	5 cut(s)	613, 1024, 1132, 2296, 2306
BmcAI	AGTACT	1 cut(s)	1524
Bme1390I	CCNGG	9 cut(s)	53, 54, 414, 649, 678, 1139, 2057, 2190, 2348
Bme18I	GGWCC	3 cut(s)	353, 524, 590
BmeT110I	CYCGRG	1 cut(s)	52
BmgT120I	GGNCC	4 cut(s)	353, 524, 590, 731
BmiI	GGNNCC	8 cut(s)	58, 145, 245, 355, 591, 904, 1885, 2165
BmrFI	CCNGG	9 cut(s)	53, 54, 414, 649, 678, 1139, 2057, 2190, 2348
BmrI	ACTGGG	2 cut(s)	1945, 2123
BmsI	GCATC	7 cut(s)	426, 623, 661, 1150, 1834, 2351, 2422
BmuI	ACTGGG	2 cut(s)	1945, 2123
BpiI	GAAGAC	1 cut(s)	415
BpmI	CTGGAG	2 cut(s)	1077, 1140
BpuEI	CTTGAG	1 cut(s)	992
BpuMI	CCSGG	6 cut(s)	53, 54, 414, 678, 2057, 2190
BsaAI	YACGTR	1 cut(s)	235
BsaBI	GATNNNNATC	2 cut(s)	1214, 1311
BsaHI	GRCGYC	2 cut(s)	72, 2049
BsaI	GGTCTC	3 cut(s)	108, 1945, 2374
BsaJI	CCNNGG	8 cut(s)	52, 618, 647, 648, 1569, 1887, 2188, 2347
BsaWI	WCCGGW	4 cut(s)	140, 391, 426, 2273
BsaXI	ACNNNNNCTCC	6 cut(s)	1512, 1542, 1595, 1625, 1925, 1955
Bsc4I	CCNNNNNNNGG	7 cut(s)	207, 263, 1368, 1646, 1824, 1959, 2314
Bse118I	RCCGGY	2 cut(s)	68, 99
Bse1I	ACTGG	8 cut(s)	643, 776, 942, 1255, 1940, 2017, 2050, 2129
Bse21I	CCTNAGG	1 cut(s)	344
Bse3DI	GCAATG	2 cut(s)	1632, 2444
Bse8I	GATNNNNATC	2 cut(s)	1214, 1311
BseBI	CCWGG	3 cut(s)	649, 1139, 2348
BseDI	CCNNGG	8 cut(s)	52, 618, 647, 648, 1569, 1887, 2188, 2347
BseGI	GGATG	4 cut(s)	614, 805, 1813, 2148
BseJI	GATNNNNATC	2 cut(s)	1214, 1311
BseLI	CCNNNNNNNGG	7 cut(s)	207, 263, 1368, 1646, 1824, 1959, 2314
BseMI	GCAATG	2 cut(s)	1632, 2444
BseMII	CTCAG	4 cut(s)	185, 826, 918, 2227
BseNI	ACTGG	8 cut(s)	643, 776, 942, 1255, 1940, 2017, 2050, 2129
BseRI	GAGGAG	3 cut(s)	159, 951, 2371
BseSI	GKGCMC	3 cut(s)	321, 648, 1551
BseXI	GCAGC	3 cut(s)	598, 1117, 2291
BshFI	GGCC	5 cut(s)	99, 181, 330, 575, 732
BsiHKAI	GWGCWC	3 cut(s)	321, 1551, 2138
BsiHKCI	CYCGRG	1 cut(s)	52
BslFI	GGGAC	2 cut(s)	603, 1975
BslI	CCNNNNNNNGG	7 cut(s)	207, 263, 1368, 1646, 1824, 1959, 2314
BsmAI	GTCTC	4 cut(s)	108, 1615, 1945, 2374
BsmFI	GGGAC	2 cut(s)	603, 1975
BsmI	GAATGC	2 cut(s)	1504, 1561
BsnI	GGCC	5 cut(s)	99, 181, 330, 575, 732
Bso31I	GGTCTC	3 cut(s)	108, 1945, 2374
BsoBI	CYCGRG	1 cut(s)	52
Bsp1286I	GDGCHC	4 cut(s)	321, 648, 1551, 2138
Bsp1407I	TGTACA	1 cut(s)	2332
Bsp143I	GATC	7 cut(s)	687, 1280, 1408, 1532, 1908, 1994, 2395
Bsp19I	CCATGG	2 cut(s)	618, 1887
BspACI	CCGC	3 cut(s)	623, 1023, 2295
BspANI	GGCC	5 cut(s)	99, 181, 330, 575, 732
BspCNI	CTCAG	4 cut(s)	184, 825, 919, 2226
BspHI	TCATGA	2 cut(s)	250, 580
BspLI	GGNNCC	8 cut(s)	58, 145, 245, 355, 591, 904, 1885, 2165
BspMI	ACCTGC	1 cut(s)	1550
BspPI	GGATC	3 cut(s)	1540, 1916, 2390
BspQI	GCTCTTC	1 cut(s)	811
BspTNI	GGTCTC	3 cut(s)	108, 1945, 2374
BsrDI	GCAATG	2 cut(s)	1632, 2444
BsrFI	RCCGGY	2 cut(s)	68, 99
BsrGI	TGTACA	1 cut(s)	2332
BsrI	ACTGG	8 cut(s)	643, 776, 942, 1255, 1940, 2017, 2050, 2129
BssAI	RCCGGY	2 cut(s)	68, 99
BssECI	CCNNGG	8 cut(s)	52, 618, 647, 648, 1569, 1887, 2188, 2347
BssMI	GATC	7 cut(s)	687, 1280, 1408, 1532, 1908, 1994, 2395
BssNI	GRCGYC	2 cut(s)	72, 2049
BssT1I	CCWWGG	3 cut(s)	618, 1569, 1887
Bst2UI	CCWGG	3 cut(s)	649, 1139, 2348
Bst4CI	ACNGT	7 cut(s)	119, 270, 444, 507, 1069, 1229, 1700
Bst6I	CTCTTC	2 cut(s)	140, 811
BstACI	GRCGYC	2 cut(s)	72, 2049
BstAPI	GCANNNNNTGC	2 cut(s)	1271, 1565
BstAUI	TGTACA	1 cut(s)	2332
BstBAI	YACGTR	1 cut(s)	235
BstC8I	GCNNGC	7 cut(s)	70, 662, 730, 753, 1020, 2257, 2344
BstDEI	CTNAG	6 cut(s)	171, 344, 812, 927, 1619, 2213
BstDSI	CCRYGG	2 cut(s)	618, 1887
BstF5I	GGATG	4 cut(s)	614, 805, 1813, 2148
BstH2I	RGCGCY	1 cut(s)	684
BstHHI	GCGC	4 cut(s)	683, 1265, 2104, 2437
BstKTI	GATC	7 cut(s)	690, 1283, 1411, 1535, 1911, 1997, 2398
BstMAI	GTCTC	4 cut(s)	108, 1615, 1945, 2374
BstMBI	GATC	7 cut(s)	687, 1280, 1408, 1532, 1908, 1994, 2395
BstMWI	GCNNNNNNNGC	5 cut(s)	620, 680, 1271, 1565, 2441
BstNI	CCWGG	3 cut(s)	649, 1139, 2348
BstNSI	RCATGY	5 cut(s)	699, 892, 1022, 1274, 1499
BstSCI	CCNGG	9 cut(s)	51, 52, 412, 647, 676, 1137, 2055, 2188, 2346
BstSFI	CTRYAG	1 cut(s)	2322
BstSLI	GKGCMC	3 cut(s)	321, 648, 1551
BstV1I	GCAGC	3 cut(s)	598, 1117, 2291
BstV2I	GAAGAC	1 cut(s)	415
BstX2I	RGATCY	1 cut(s)	1532
BstXI	CCANNNNNNTGG	2 cut(s)	759, 794
BstYI	RGATCY	1 cut(s)	1532
Bsu36I	CCTNAGG	1 cut(s)	344
BsuI	GTATCC	1 cut(s)	1209
BsuRI	GGCC	5 cut(s)	99, 181, 330, 575, 732
BtgI	CCRYGG	2 cut(s)	618, 1887
BtsCI	GGATG	4 cut(s)	614, 805, 1813, 2148
BtsI	GCAGTG	1 cut(s)	1032
BtsIMutI	CAGTG	4 cut(s)	1032, 1248, 1793, 2136
BveI	ACCTGC	1 cut(s)	1550
Cac8I	GCNNGC	7 cut(s)	70, 662, 730, 753, 1020, 2257, 2344
CaiI	CAGNNNCTG	1 cut(s)	926
CciI	TCATGA	2 cut(s)	250, 580
CfoI	GCGC	4 cut(s)	683, 1265, 2104, 2437
Cfr10I	RCCGGY	2 cut(s)	68, 99
Cfr13I	GGNCC	4 cut(s)	353, 524, 590, 731
Cfr9I	CCCGGG	1 cut(s)	52
CseI	GACGC	2 cut(s)	61, 2038
Csp6I	GTAC	7 cut(s)	91, 445, 556, 1330, 1429, 1523, 2333
CviQI	GTAC	7 cut(s)	91, 445, 556, 1330, 1429, 1523, 2333
DdeI	CTNAG	6 cut(s)	171, 344, 812, 927, 1619, 2213
DpnI	GATC	7 cut(s)	689, 1282, 1410, 1534, 1910, 1996, 2397
DpnII	GATC	7 cut(s)	687, 1280, 1408, 1532, 1908, 1994, 2395
DraIII	CACNNNGTG	2 cut(s)	521, 2131
EaeI	YGGCCR	2 cut(s)	97, 179
Eam1104I	CTCTTC	2 cut(s)	140, 811
EarI	CTCTTC	2 cut(s)	140, 811
EciI	GGCGGA	1 cut(s)	638
Eco130I	CCWWGG	3 cut(s)	618, 1569, 1887
Eco147I	AGGCCT	1 cut(s)	330
Eco31I	GGTCTC	3 cut(s)	108, 1945, 2374
Eco32I	GATATC	2 cut(s)	1730, 2067
Eco47I	GGWCC	3 cut(s)	353, 524, 590
Eco57I	CTGAAG	2 cut(s)	843, 2024
Eco81I	CCTNAGG	1 cut(s)	344
Eco88I	CYCGRG	1 cut(s)	52
EcoO109I	RGGNCCY	1 cut(s)	590
EcoRII	CCWGG	3 cut(s)	647, 1137, 2346
EcoRV	GATATC	2 cut(s)	1730, 2067
EcoT14I	CCWWGG	3 cut(s)	618, 1569, 1887
EcoT22I	ATGCAT	2 cut(s)	697, 1723
ErhI	CCWWGG	3 cut(s)	618, 1569, 1887
FalI	AAGNNNNNCTT	6 cut(s)	119, 151, 948, 980, 1225, 1257
FaqI	GGGAC	2 cut(s)	603, 1975
FauNDI	CATATG	1 cut(s)	1717
FbaI	TGATCA	1 cut(s)	687
FblI	GTMKAC	4 cut(s)	483, 1104, 1386, 2052
Fnu4HI	GCNGC	5 cut(s)	612, 1023, 1131, 2295, 2305
FokI	GGATG	4 cut(s)	601, 812, 1800, 2155
Fsp4HI	GCNGC	5 cut(s)	612, 1023, 1131, 2295, 2305
FspBI	CTAG	2 cut(s)	1658, 2157
FspI	TGCGCA	1 cut(s)	2436
GlaI	GCGC	4 cut(s)	682, 1264, 2103, 2436
GluI	GCNGC	5 cut(s)	612, 1023, 1131, 2295, 2305
GsuI	CTGGAG	2 cut(s)	1077, 1140
HaeII	RGCGCY	1 cut(s)	684
HaeIII	GGCC	5 cut(s)	99, 181, 330, 575, 732
HgaI	GACGC	2 cut(s)	61, 2038
HhaI	GCGC	4 cut(s)	683, 1265, 2104, 2437
Hin1I	GRCGYC	2 cut(s)	72, 2049
Hin6I	GCGC	4 cut(s)	681, 1263, 2102, 2435
HinP1I	GCGC	4 cut(s)	681, 1263, 2102, 2435
HincII	GTYRAC	2 cut(s)	76, 2053
HindII	GTYRAC	2 cut(s)	76, 2053
HinfI	GANTC	8 cut(s)	130, 569, 1307, 1451, 1466, 1963, 2318, 2409
HphI	GGTGA	4 cut(s)	1153, 1910, 2288, 2405
Hpy188III	TCNNGA	8 cut(s)	251, 581, 965, 1119, 1463, 1536, 1658, 2072
Hpy99I	CGWCG	2 cut(s)	119, 2054
HpyAV	CCTTC	9 cut(s)	200, 257, 304, 367, 620, 1954, 1977, 2280, 2332
HpyCH4III	ACNGT	7 cut(s)	119, 270, 444, 507, 1069, 1229, 1700
HpyCH4IV	ACGT	4 cut(s)	84, 234, 1479, 2420
HpyF10VI	GCNNNNNNNGC	5 cut(s)	620, 680, 1271, 1565, 2441
HpyF3I	CTNAG	6 cut(s)	171, 344, 812, 927, 1619, 2213
HpySE526I	ACGT	4 cut(s)	84, 234, 1479, 2420
Hsp92I	GRCGYC	2 cut(s)	72, 2049
HspAI	GCGC	4 cut(s)	681, 1263, 2102, 2435
KroI	GCCGGC	1 cut(s)	68
KroNI	GCCGGC	1 cut(s)	70
Ksp22I	TGATCA	1 cut(s)	687
Kzo9I	GATC	7 cut(s)	687, 1280, 1408, 1532, 1908, 1994, 2395
LguI	GCTCTTC	1 cut(s)	811
LmnI	GCTCC	3 cut(s)	679, 964, 1649
Lsp1109I	GCAGC	3 cut(s)	598, 1117, 2291
LweI	GCATC	7 cut(s)	426, 623, 661, 1150, 1834, 2351, 2422
MaeI	CTAG	2 cut(s)	1658, 2157
MaeII	ACGT	4 cut(s)	84, 234, 1479, 2420
MaeIII	GTNAC	3 cut(s)	290, 537, 934
MalI	GATC	7 cut(s)	689, 1282, 1410, 1534, 1910, 1996, 2397
MboI	GATC	7 cut(s)	687, 1280, 1408, 1532, 1908, 1994, 2395
MfeI	CAATTG	1 cut(s)	1193
MflI	RGATCY	1 cut(s)	1532
MhlI	GDGCHC	4 cut(s)	321, 648, 1551, 2138
MlsI	TGGCCA	1 cut(s)	181
MluCI	AATT	8 cut(s)	756, 907, 1013, 1075, 1172, 1193, 1318, 2079
MluNI	TGGCCA	1 cut(s)	181
MlyI	GAGTC	3 cut(s)	1445, 1957, 2312
MmeI	TCCRAC	1 cut(s)	1612
Mox20I	TGGCCA	1 cut(s)	181
Mph1103I	ATGCAT	2 cut(s)	697, 1723
MreI	CGCCGGCG	1 cut(s)	68
MroNI	GCCGGC	1 cut(s)	68
MroXI	GAANNNNTTC	2 cut(s)	630, 1341
MscI	TGGCCA	1 cut(s)	181
MseI	TTAA	8 cut(s)	401, 1113, 1245, 1475, 1584, 1799, 1874, 2061
MslI	CAYNNNNRTG	5 cut(s)	1494, 1554, 1720, 1975, 2141
Msp20I	TGGCCA	1 cut(s)	181
MspR9I	CCNGG	9 cut(s)	53, 54, 414, 649, 678, 1139, 2057, 2190, 2348
MunI	CAATTG	1 cut(s)	1193
Mva1269I	GAATGC	2 cut(s)	1504, 1561
MvaI	CCWGG	3 cut(s)	649, 1139, 2348
MwoI	GCNNNNNNNGC	5 cut(s)	620, 680, 1271, 1565, 2441
NaeI	GCCGGC	1 cut(s)	70
NciI	CCSGG	6 cut(s)	53, 54, 414, 678, 2057, 2190
NcoI	CCATGG	2 cut(s)	618, 1887
NdeI	CATATG	1 cut(s)	1717
NdeII	GATC	7 cut(s)	687, 1280, 1408, 1532, 1908, 1994, 2395
NgoMIV	GCCGGC	1 cut(s)	68
NlaIV	GGNNCC	8 cut(s)	58, 145, 245, 355, 591, 904, 1885, 2165
NmuCI	GTSAC	3 cut(s)	290, 537, 934
NsbI	TGCGCA	1 cut(s)	2436
NsiI	ATGCAT	2 cut(s)	697, 1723
NspI	RCATGY	5 cut(s)	699, 892, 1022, 1274, 1499
PaeI	GCATGC	1 cut(s)	1022
PagI	TCATGA	2 cut(s)	250, 580
PasI	CCCWGGG	1 cut(s)	648
PceI	AGGCCT	1 cut(s)	330
PciI	ACATGT	2 cut(s)	888, 1495
PciSI	GCTCTTC	1 cut(s)	811
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PctI	GAATGC	2 cut(s)	1504, 1561
PdiI	GCCGGC	1 cut(s)	70
PdmI	GAANNNNTTC	2 cut(s)	630, 1341
PfeI	GAWTC	5 cut(s)	130, 569, 1307, 1466, 2409
PflMI	CCANNNNNTGG	1 cut(s)	1824
PkrI	GCNGC	5 cut(s)	613, 1024, 1132, 2296, 2306
PleI	GAGTC	3 cut(s)	1445, 1957, 2312
PpsI	GAGTC	3 cut(s)	1445, 1957, 2312
Ppu21I	YACGTR	1 cut(s)	235
PpuMI	RGGWCCY	1 cut(s)	590
PscI	ACATGT	2 cut(s)	888, 1495
Psp1406I	AACGTT	1 cut(s)	2420
Psp5II	RGGWCCY	1 cut(s)	590
Psp6I	CCWGG	3 cut(s)	647, 1137, 2346
PspGI	CCWGG	3 cut(s)	647, 1137, 2346
PspN4I	GGNNCC	8 cut(s)	58, 145, 245, 355, 591, 904, 1885, 2165
PspPI	GGNCC	4 cut(s)	353, 524, 590, 731
PspPPI	RGGWCCY	1 cut(s)	590
PstNI	CAGNNNCTG	1 cut(s)	926
PsuI	RGATCY	1 cut(s)	1532
RsaI	GTAC	7 cut(s)	92, 446, 557, 1331, 1430, 1524, 2334
RsaNI	GTAC	7 cut(s)	91, 445, 556, 1330, 1429, 1523, 2333
RseI	CAYNNNNRTG	5 cut(s)	1494, 1554, 1720, 1975, 2141
SalI	GTCGAC	1 cut(s)	2051
SapI	GCTCTTC	1 cut(s)	811
SaqAI	TTAA	8 cut(s)	401, 1113, 1245, 1475, 1584, 1799, 1874, 2061
SatI	GCNGC	5 cut(s)	612, 1023, 1131, 2295, 2305
Sau3AI	GATC	7 cut(s)	687, 1280, 1408, 1532, 1908, 1994, 2395
Sau96I	GGNCC	4 cut(s)	353, 524, 590, 731
ScaI	AGTACT	1 cut(s)	1524
SchI	GAGTC	3 cut(s)	1445, 1957, 2312
ScrFI	CCNGG	9 cut(s)	53, 54, 414, 649, 678, 1139, 2057, 2190, 2348
SduI	GDGCHC	4 cut(s)	321, 648, 1551, 2138
SfaNI	GCATC	7 cut(s)	426, 623, 661, 1150, 1834, 2351, 2422
SfcI	CTRYAG	1 cut(s)	2322
SgrAI	CRCCGGYG	1 cut(s)	68
SinI	GGWCC	3 cut(s)	353, 524, 590
SmaI	CCCGGG	1 cut(s)	54
SmiMI	CAYNNNNRTG	5 cut(s)	1494, 1554, 1720, 1975, 2141
SmlI	CTYRAG	1 cut(s)	1007
SmoI	CTYRAG	1 cut(s)	1007
SpeI	ACTAGT	1 cut(s)	2156
SphI	GCATGC	1 cut(s)	1022
Sse9I	AATT	8 cut(s)	756, 907, 1013, 1075, 1172, 1193, 1318, 2079
SseBI	AGGCCT	1 cut(s)	330
SsiI	CCGC	3 cut(s)	623, 1023, 2295
SspMI	CTAG	2 cut(s)	1658, 2157
StuI	AGGCCT	1 cut(s)	330
StyD4I	CCNGG	9 cut(s)	51, 52, 412, 647, 676, 1137, 2055, 2188, 2346
StyI	CCWWGG	3 cut(s)	618, 1569, 1887
TaaI	ACNGT	7 cut(s)	119, 270, 444, 507, 1069, 1229, 1700
TaiI	ACGT	4 cut(s)	87, 237, 1482, 2423
TaqI	TCGA	6 cut(s)	114, 567, 1208, 1930, 1993, 2052
TaqII	GACCGA	2 cut(s)	541, 2356
TasI	AATT	8 cut(s)	756, 907, 1013, 1075, 1172, 1193, 1318, 2079
TatI	WGTACW	4 cut(s)	555, 1329, 1522, 2332
TauI	GCSGC	2 cut(s)	1025, 2297
TfiI	GAWTC	5 cut(s)	130, 569, 1307, 1466, 2409
Tru1I	TTAA	8 cut(s)	401, 1113, 1245, 1475, 1584, 1799, 1874, 2061
Tru9I	TTAA	8 cut(s)	401, 1113, 1245, 1475, 1584, 1799, 1874, 2061
TscAI	CASTG	4 cut(s)	1032, 1255, 1793, 2136
TseFI	GTSAC	3 cut(s)	290, 537, 934
TseI	GCWGC	3 cut(s)	611, 1130, 2304
Tsp45I	GTSAC	3 cut(s)	290, 537, 934
TspGWI	ACGGA	1 cut(s)	1506
TspMI	CCCGGG	1 cut(s)	52
TspRI	CASTG	4 cut(s)	1032, 1255, 1793, 2136
Van91I	CCANNNNNTGG	1 cut(s)	1824
VneI	GTGCAC	2 cut(s)	317, 1547
VpaK11BI	GGWCC	3 cut(s)	353, 524, 590
XapI	RAATTY	1 cut(s)	2079
XbaI	TCTAGA	1 cut(s)	1657
XceI	RCATGY	5 cut(s)	699, 892, 1022, 1274, 1499
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2136
XmaI	CCCGGG	1 cut(s)	52
XmiI	GTMKAC	4 cut(s)	483, 1104, 1386, 2052
XmnI	GAANNNNTTC	2 cut(s)	630, 1341
XspI	CTAG	2 cut(s)	1658, 2157
ZrmI	AGTACT	1 cut(s)	1524
Zsp2I	ATGCAT	2 cut(s)	697, 1723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.