Rmu_sc0001478.1_g000001

beta-galactosidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001478.1
Physical Location & Seq
Forward (+)
1 .. 3657
3657 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001478.1_g000001.1.cds

Sequence Viewer

Length: 1594 bp
gaacattccgggcattgttttccggtctgataatgaaccgtataaggctgaaatgcagaggtttacagcaaaaatagtagacctaatgaaatcaaatggactgtacgcttcacaaggcggaccgattatattgtcacagattgagaacgagtaccaaaatgtggaagcggcgtttcatgaaaagggacctccttatgttctttgggctgcatccatggcggagggccttcaaactggtgtgccctgggttatgtgcaagcaaaatgatgctcccggcgctgtgatcaatgcatgcaatgggttgaggtgtggagaaacctttgctggcccaaatgcccctaataagccagcaatttggacagaggactggacaagccaataccttgtatatggtgaagaaccatacctcagaagagctgaagatattgcatttcatgttgcactctttattgcaaagaataaaggaagctatgtaaactactacatgtatcatggaggaaccaattttggaagaacaacttccgagtttgtgactacaagttattacgatgaagctcctcttgatgagtatggtataccaaaggaaccaaaatggagtcatctcaaggagttgcatgctgcagtgaagttgtccatcagtcctctacttgctggagaacaaaccgtcgtcaatttgggtcaatttcaaacagcctatgtctacaaagctcaatctggtgaatgtgctgctttcttggtgaacaatggctctaaagatgccgctgtccaatttcagaactctccttatcaattgtctccaaagtcaattagtatcttaccagactgtaaaaatgtgactttcaacactggaaaggtaagcgcacaacaagcaacaagatcatggacaccagctcaaaagtttgattcacctcagaattggcaagagtacaaagaagccattcccacttatgatgacacctctctaagagagaacataatagtagaccaaatgagaactacaaatgatcgttctgattatctgtggtacactttcagctttcagcatgactctcctaatccagaatccacattaaacgtgcaaacacgcggacatatcctgcattcattcgtaaacggagtacttgtaggatctggacatggagtgctcaggaatacaggtttttccttggagaataagattactctgaataaggggataaaccatgtctccctgctaagtgcaatggttggactgccggactctggagcatatctagagcgtagagattttggattacagagtgtgaagattaacgataaagatttcggcaaatatgcatggggataccagactttatttgatgcaccagcagggaatgaccctgttgcattatatcttggttccatgggaaagggtgaagtttggatcaatggtcaaagcattggtcgatattgggtctccttccacaccccaaaagggactccttcacagacatggtaccatgtacctcgatcttttctgaagcctactggaaacttgttagttctcattgaagaagaaactggagacccggttaagatatctctggacaaagtaaattatagttttcaatga

Protein Analysis

530

Amino Acids

59.09

Weight (kDa)

5.88

Isoelectric Point (pI)

38.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1477
AccB1I GGYRCC 1 cut(s) 1477
AccB7I CCANNNNNTGG 1 cut(s) 161
AccI GTMKAC 4 cut(s) 79, 575, 700, 982
AccII CGCG 1 cut(s) 1087
AciI CCGC 5 cut(s) 118, 168, 219, 760, 1087
AclWI GGATC 2 cut(s) 1136, 1413
AcuI CTGAAG 2 cut(s) 439, 1521
AfaI GTAC 7 cut(s) 105, 153, 927, 1026, 1120, 1479, 1486
AfiI CCNNNNNNNGG 3 cut(s) 161, 1242, 1456
AflIII ACRYGT 1 cut(s) 484
AgsI TTSAA 5 cut(s) 231, 687, 842, 1533, 1590
AjnI CCWGG 1 cut(s) 243
AluBI AGCT 6 cut(s) 417, 469, 555, 708, 891, 1036
AluI AGCT 6 cut(s) 417, 469, 555, 708, 891, 1036
Alw21I GWGCWC 1 cut(s) 1147
Alw26I GTCTC 4 cut(s) 799, 1211, 1442, 1540
AlwI GGATC 2 cut(s) 1136, 1413
AoxI GGCC 2 cut(s) 224, 326
ApeKI GCWGC 3 cut(s) 207, 618, 726
ArsI GACNNNNNNTTYG 2 cut(s) 1409, 1441
Asp700I GAANNNNTTC 2 cut(s) 518, 937
Asp718I GGTACC 1 cut(s) 1477
AspLEI GCGC 2 cut(s) 279, 861
AspS9I GGNCC 4 cut(s) 120, 186, 224, 327
AsuC2I CCSGG 3 cut(s) 10, 274, 1551
AsuHPI GGTGA 5 cut(s) 405, 729, 749, 898, 1407
AvaII GGWCC 2 cut(s) 120, 186
BaeGI GKGCMC 1 cut(s) 244
BanI GGYRCC 1 cut(s) 1477
Bbv12I GWGCWC 1 cut(s) 1147
BbvI GCAGC 3 cut(s) 194, 605, 713
BccI CCATC 1 cut(s) 642
BciT130I CCWGG 1 cut(s) 245
BciVI GTATCC 1 cut(s) 1317
BclI TGATCA 1 cut(s) 283
BcnI CCSGG 3 cut(s) 10, 274, 1551
BcoDI GTCTC 4 cut(s) 799, 1211, 1442, 1540
BfaI CTAG 1 cut(s) 1254
BfmI CTRYAG 1 cut(s) 619
BfoI RGCGCY 1 cut(s) 280
BfuI GTATCC 1 cut(s) 1317
BisI GCNGC 5 cut(s) 169, 208, 619, 727, 760
BlsI GCNGC 5 cut(s) 170, 209, 620, 728, 761
BmcAI AGTACT 1 cut(s) 1120
Bme1390I CCNGG 4 cut(s) 10, 245, 274, 1551
Bme18I GGWCC 2 cut(s) 120, 186
BmgT120I GGNCC 4 cut(s) 120, 186, 224, 327
BmiI GGNNCC 5 cut(s) 187, 500, 586, 1382, 1479
BmrFI CCNGG 4 cut(s) 10, 245, 274, 1551
BmsI GCATC 4 cut(s) 219, 257, 746, 1331
BpmI CTGGAG 3 cut(s) 673, 1264, 1564
Bpu10I CCTNAGC 1 cut(s) 1146
BpuEI CTTGAG 1 cut(s) 588
BpuMI CCSGG 3 cut(s) 10, 274, 1551
BsaI GGTCTC 2 cut(s) 1442, 1540
BsaJI CCNNGG 5 cut(s) 214, 243, 244, 1165, 1384
BsaWI WCCGGW 1 cut(s) 22
BsaXI ACNNNNNCTCC 6 cut(s) 1108, 1138, 1191, 1221, 1537, 1567
Bsc4I CCNNNNNNNGG 3 cut(s) 161, 1242, 1456
Bse1I ACTGG 5 cut(s) 239, 372, 851, 1514, 1547
Bse3DI GCAATG 2 cut(s) 302, 1228
BseBI CCWGG 1 cut(s) 245
BseDI CCNNGG 5 cut(s) 214, 243, 244, 1165, 1384
BseGI GGATG 1 cut(s) 210
BseLI CCNNNNNNNGG 3 cut(s) 161, 1242, 1456
BseMI GCAATG 2 cut(s) 302, 1228
BseMII CTCAG 3 cut(s) 422, 924, 1160
BseNI ACTGG 5 cut(s) 239, 372, 851, 1514, 1547
BseRI GAGGAG 1 cut(s) 547
BseSI GKGCMC 1 cut(s) 244
BseXI GCAGC 3 cut(s) 194, 605, 713
Bsh1236I CGCG 1 cut(s) 1087
BshFI GGCC 2 cut(s) 226, 328
BshNI GGYRCC 1 cut(s) 1477
BsiHKAI GWGCWC 1 cut(s) 1147
BsiSI CCGG 5 cut(s) 9, 23, 274, 1236, 1551
BslFI GGGAC 2 cut(s) 199, 1472
BslI CCNNNNNNNGG 3 cut(s) 161, 1242, 1456
BsmAI GTCTC 4 cut(s) 799, 1211, 1442, 1540
BsmFI GGGAC 2 cut(s) 199, 1472
BsmI GAATGC 1 cut(s) 1100
BsnI GGCC 2 cut(s) 226, 328
Bso31I GGTCTC 2 cut(s) 1442, 1540
Bsp1286I GDGCHC 2 cut(s) 244, 1147
Bsp143I GATC 6 cut(s) 283, 876, 1004, 1128, 1405, 1491
Bsp19I CCATGG 2 cut(s) 214, 1384
BspACI CCGC 5 cut(s) 118, 168, 219, 760, 1087
BspANI GGCC 2 cut(s) 226, 328
BspCNI CTCAG 3 cut(s) 421, 923, 1159
BspFNI CGCG 1 cut(s) 1087
BspHI TCATGA 1 cut(s) 176
BspLI GGNNCC 5 cut(s) 187, 500, 586, 1382, 1479
BspMAI CTGCAG 1 cut(s) 623
BspPI GGATC 2 cut(s) 1136, 1413
BspQI GCTCTTC 1 cut(s) 407
BspT107I GGYRCC 1 cut(s) 1477
BspTNI GGTCTC 2 cut(s) 1442, 1540
BsrDI GCAATG 2 cut(s) 302, 1228
BsrI ACTGG 5 cut(s) 239, 372, 851, 1514, 1547
BssECI CCNNGG 5 cut(s) 214, 243, 244, 1165, 1384
BssMI GATC 6 cut(s) 283, 876, 1004, 1128, 1405, 1491
BssNAI GTATAC 1 cut(s) 576
BssT1I CCWWGG 3 cut(s) 214, 1165, 1384
Bst1107I GTATAC 1 cut(s) 576
Bst2UI CCWGG 1 cut(s) 245
Bst4CI ACNGT 4 cut(s) 40, 103, 665, 825
Bst6I CTCTTC 1 cut(s) 407
BstC8I GCNNGC 5 cut(s) 258, 293, 326, 349, 616
BstDEI CTNAG 5 cut(s) 408, 910, 963, 1146, 1215
BstDSI CCRYGG 2 cut(s) 214, 1384
BstF5I GGATG 1 cut(s) 210
BstFNI CGCG 1 cut(s) 1087
BstH2I RGCGCY 1 cut(s) 280
BstHHI GCGC 2 cut(s) 279, 861
BstKTI GATC 6 cut(s) 286, 879, 1007, 1131, 1408, 1494
BstMAI GTCTC 4 cut(s) 799, 1211, 1442, 1540
BstMBI GATC 6 cut(s) 283, 876, 1004, 1128, 1405, 1491
BstMWI GCNNNNNNNGC 3 cut(s) 216, 276, 867
BstNI CCWGG 1 cut(s) 245
BstNSI RCATGY 3 cut(s) 295, 488, 618
BstSCI CCNGG 4 cut(s) 8, 243, 272, 1549
BstSFI CTRYAG 1 cut(s) 619
BstSLI GKGCMC 1 cut(s) 244
BstUI CGCG 1 cut(s) 1087
BstV1I GCAGC 3 cut(s) 194, 605, 713
BstX2I RGATCY 1 cut(s) 1128
BstXI CCANNNNNNTGG 1 cut(s) 355
BstYI RGATCY 1 cut(s) 1128
BstZ17I GTATAC 1 cut(s) 576
BsuI GTATCC 1 cut(s) 1317
BsuRI GGCC 2 cut(s) 226, 328
BtgI CCRYGG 2 cut(s) 214, 1384
BtsCI GGATG 1 cut(s) 210
BtsI GCAGTG 1 cut(s) 628
BtsIMutI CAGTG 2 cut(s) 628, 844
Cac8I GCNNGC 5 cut(s) 258, 293, 326, 349, 616
CciI TCATGA 1 cut(s) 176
CfoI GCGC 2 cut(s) 279, 861
Cfr13I GGNCC 4 cut(s) 120, 186, 224, 327
CpoI CGGWCCG 1 cut(s) 120
Csp6I GTAC 7 cut(s) 104, 152, 926, 1025, 1119, 1478, 1485
CspI CGGWCCG 1 cut(s) 120
CviQI GTAC 7 cut(s) 104, 152, 926, 1025, 1119, 1478, 1485
DdeI CTNAG 5 cut(s) 408, 910, 963, 1146, 1215
DpnI GATC 6 cut(s) 285, 878, 1006, 1130, 1407, 1493
DpnII GATC 6 cut(s) 283, 876, 1004, 1128, 1405, 1491
Eam1104I CTCTTC 1 cut(s) 407
EarI CTCTTC 1 cut(s) 407
EciI GGCGGA 2 cut(s) 133, 234
Eco130I CCWWGG 3 cut(s) 214, 1165, 1384
Eco31I GGTCTC 2 cut(s) 1442, 1540
Eco32I GATATC 1 cut(s) 1561
Eco47I GGWCC 2 cut(s) 120, 186
Eco57I CTGAAG 2 cut(s) 439, 1521
EcoO109I RGGNCCY 2 cut(s) 186, 224
EcoRII CCWGG 1 cut(s) 243
EcoRV GATATC 1 cut(s) 1561
EcoT14I CCWWGG 3 cut(s) 214, 1165, 1384
EcoT22I ATGCAT 2 cut(s) 293, 1319
ErhI CCWWGG 3 cut(s) 214, 1165, 1384
FalI AAGNNNNNCTT 4 cut(s) 503, 535, 544, 576
FaqI GGGAC 2 cut(s) 199, 1472
FbaI TGATCA 1 cut(s) 283
FblI GTMKAC 4 cut(s) 79, 575, 700, 982
Fnu4HI GCNGC 5 cut(s) 169, 208, 619, 727, 760
FokI GGATG 1 cut(s) 197
Fsp4HI GCNGC 5 cut(s) 169, 208, 619, 727, 760
FspBI CTAG 1 cut(s) 1254
GlaI GCGC 2 cut(s) 278, 860
GluI GCNGC 5 cut(s) 169, 208, 619, 727, 760
GsuI CTGGAG 3 cut(s) 673, 1264, 1564
HaeII RGCGCY 1 cut(s) 280
HaeIII GGCC 2 cut(s) 226, 328
HapII CCGG 5 cut(s) 9, 23, 274, 1236, 1551
HhaI GCGC 2 cut(s) 279, 861
Hin6I GCGC 2 cut(s) 277, 859
HinP1I GCGC 2 cut(s) 277, 859
HinfI GANTC 6 cut(s) 596, 903, 1047, 1062, 1239, 1460
HpaII CCGG 5 cut(s) 9, 23, 274, 1236, 1551
HphI GGTGA 5 cut(s) 405, 729, 749, 898, 1407
Hpy166II GTNNAC 9 cut(s) 64, 80, 476, 576, 701, 740, 983, 1027, 1112
Hpy188I TCNGA 8 cut(s) 29, 411, 524, 775, 913, 1013, 1186, 1501
Hpy188III TCNNGA 8 cut(s) 177, 561, 1059, 1132, 1148, 1243, 1254, 1566
Hpy8I GTNNAC 9 cut(s) 64, 80, 476, 576, 701, 740, 983, 1027, 1112
Hpy99I CGWCG 1 cut(s) 669
HpyAV CCTTC 3 cut(s) 237, 1451, 1474
HpyCH4III ACNGT 4 cut(s) 40, 103, 665, 825
HpyCH4IV ACGT 1 cut(s) 1075
HpyF10VI GCNNNNNNNGC 3 cut(s) 216, 276, 867
HpyF3I CTNAG 5 cut(s) 408, 910, 963, 1146, 1215
HpySE526I ACGT 1 cut(s) 1075
HspAI GCGC 2 cut(s) 277, 859
KpnI GGTACC 1 cut(s) 1481
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 6 cut(s) 283, 876, 1004, 1128, 1405, 1491
LguI GCTCTTC 1 cut(s) 407
LmnI GCTCC 3 cut(s) 275, 560, 1245
Lsp1109I GCAGC 3 cut(s) 194, 605, 713
LweI GCATC 4 cut(s) 219, 257, 746, 1331
MaeI CTAG 1 cut(s) 1254
MaeII ACGT 1 cut(s) 1075
MaeIII GTNAC 3 cut(s) 133, 530, 833
MalI GATC 6 cut(s) 285, 878, 1006, 1130, 1407, 1493
MboI GATC 6 cut(s) 283, 876, 1004, 1128, 1405, 1491
MboII GAAGA 7 cut(s) 408, 424, 432, 523, 1298, 1545, 1548
MfeI CAATTG 1 cut(s) 789
MflI RGATCY 1 cut(s) 1128
MhlI GDGCHC 2 cut(s) 244, 1147
MluCI AATT 9 cut(s) 352, 503, 671, 681, 768, 789, 805, 914, 1577
MlyI GAGTC 4 cut(s) 605, 1041, 1233, 1454
MmeI TCCRAC 1 cut(s) 1208
Mph1103I ATGCAT 2 cut(s) 293, 1319
MroXI GAANNNNTTC 2 cut(s) 518, 937
MseI TTAA 3 cut(s) 1071, 1291, 1555
MslI CAYNNNNRTG 1 cut(s) 1472
MspA1I CMGCKG 1 cut(s) 762
MspI CCGG 5 cut(s) 9, 23, 274, 1236, 1551
MspR9I CCNGG 4 cut(s) 10, 245, 274, 1551
MunI CAATTG 1 cut(s) 789
Mva1269I GAATGC 1 cut(s) 1100
MvaI CCWGG 1 cut(s) 245
MvnI CGCG 1 cut(s) 1087
MwoI GCNNNNNNNGC 3 cut(s) 216, 276, 867
NciI CCSGG 3 cut(s) 10, 274, 1551
NcoI CCATGG 2 cut(s) 214, 1384
NdeII GATC 6 cut(s) 283, 876, 1004, 1128, 1405, 1491
NlaIV GGNNCC 5 cut(s) 187, 500, 586, 1382, 1479
NmuCI GTSAC 3 cut(s) 133, 530, 833
NsiI ATGCAT 2 cut(s) 293, 1319
NspI RCATGY 3 cut(s) 295, 488, 618
PaeI GCATGC 2 cut(s) 295, 618
PagI TCATGA 1 cut(s) 176
PasI CCCWGGG 1 cut(s) 244
PciI ACATGT 1 cut(s) 484
PciSI GCTCTTC 1 cut(s) 407
PctI GAATGC 1 cut(s) 1100
PdmI GAANNNNTTC 2 cut(s) 518, 937
PfeI GAWTC 2 cut(s) 903, 1062
PflMI CCANNNNNTGG 1 cut(s) 161
PkrI GCNGC 5 cut(s) 170, 209, 620, 728, 761
PleI GAGTC 4 cut(s) 604, 1041, 1233, 1454
PpsI GAGTC 4 cut(s) 604, 1041, 1233, 1454
PpuMI RGGWCCY 1 cut(s) 186
PscI ACATGT 1 cut(s) 484
Psp5II RGGWCCY 1 cut(s) 186
Psp6I CCWGG 1 cut(s) 243
PspGI CCWGG 1 cut(s) 243
PspN4I GGNNCC 5 cut(s) 187, 500, 586, 1382, 1479
PspPI GGNCC 4 cut(s) 120, 186, 224, 327
PspPPI RGGWCCY 1 cut(s) 186
PstI CTGCAG 1 cut(s) 623
PsuI RGATCY 1 cut(s) 1128
RsaI GTAC 7 cut(s) 105, 153, 927, 1026, 1120, 1479, 1486
RsaNI GTAC 7 cut(s) 104, 152, 926, 1025, 1119, 1478, 1485
RseI CAYNNNNRTG 1 cut(s) 1472
Rsr2I CGGWCCG 1 cut(s) 120
RsrII CGGWCCG 1 cut(s) 120
SapI GCTCTTC 1 cut(s) 407
SaqAI TTAA 3 cut(s) 1071, 1291, 1555
SatI GCNGC 5 cut(s) 169, 208, 619, 727, 760
Sau3AI GATC 6 cut(s) 283, 876, 1004, 1128, 1405, 1491
Sau96I GGNCC 4 cut(s) 120, 186, 224, 327
ScaI AGTACT 1 cut(s) 1120
SchI GAGTC 4 cut(s) 605, 1041, 1233, 1454
ScrFI CCNGG 4 cut(s) 10, 245, 274, 1551
SduI GDGCHC 2 cut(s) 244, 1147
SfaNI GCATC 4 cut(s) 219, 257, 746, 1331
SfcI CTRYAG 1 cut(s) 619
SinI GGWCC 2 cut(s) 120, 186
SmiMI CAYNNNNRTG 1 cut(s) 1472
SmlI CTYRAG 1 cut(s) 603
SmoI CTYRAG 1 cut(s) 603
SphI GCATGC 2 cut(s) 295, 618
Sse9I AATT 9 cut(s) 352, 503, 671, 681, 768, 789, 805, 914, 1577
SsiI CCGC 5 cut(s) 118, 168, 219, 760, 1087
SspMI CTAG 1 cut(s) 1254
StyD4I CCNGG 4 cut(s) 8, 243, 272, 1549
StyI CCWWGG 3 cut(s) 214, 1165, 1384
TaaI ACNGT 4 cut(s) 40, 103, 665, 825
TaiI ACGT 1 cut(s) 1078
TaqI TCGA 2 cut(s) 1427, 1490
TaqII GACCGA 1 cut(s) 137
TasI AATT 9 cut(s) 352, 503, 671, 681, 768, 789, 805, 914, 1577
TatI WGTACW 2 cut(s) 925, 1118
TauI GCSGC 2 cut(s) 171, 762
TfiI GAWTC 2 cut(s) 903, 1062
Tru1I TTAA 3 cut(s) 1071, 1291, 1555
Tru9I TTAA 3 cut(s) 1071, 1291, 1555
TscAI CASTG 2 cut(s) 628, 851
TseFI GTSAC 3 cut(s) 133, 530, 833
TseI GCWGC 3 cut(s) 207, 618, 726
Tsp45I GTSAC 3 cut(s) 133, 530, 833
TspDTI ATGAA 7 cut(s) 49, 102, 165, 193, 423, 565, 1093
TspGWI ACGGA 1 cut(s) 1129
TspRI CASTG 2 cut(s) 628, 851
Van91I CCANNNNNTGG 1 cut(s) 161
VpaK11BI GGWCC 2 cut(s) 120, 186
XbaI TCTAGA 1 cut(s) 1253
XceI RCATGY 3 cut(s) 295, 488, 618
XmiI GTMKAC 4 cut(s) 79, 575, 700, 982
XmnI GAANNNNTTC 2 cut(s) 518, 937
XspI CTAG 1 cut(s) 1254
ZrmI AGTACT 1 cut(s) 1120
Zsp2I ATGCAT 2 cut(s) 293, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.