Rmu_sc0004708.1_g000001

beta-galactosidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004708.1
Physical Location & Seq
Reverse (-)
1864 .. 5243
3380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004708.1_g000001.1.cds

Sequence Viewer

Length: 1659 bp
atggtcttatgggtaaaactagtcccgttcaccgagtttaatgttttattttgtcagttggctcggaacattccgggcattgttttccggtctgataatgaaccgtataaggctgaaatgcagaggtttacagcaaaaatagtagacctaatgaaatcaaatggactgtacgcttcacaaggcggaccgattatattgtcacagattgagaacgagtaccaaaatgtggaagcggcgtttcatgaaaagggacctccttatgttctttgggctgcatccatggcggagggccttcaaactggtgtgccctgggttatgtgcaagcaaaatgatgctcccggcgctgtgatcaatgcatgcaatgggttgaggtgtggagaaacctttgctggcccaaatgcccctaataagccagcaatttggacagaggactggacaagccaataccttgtatatggtgaagaaccatacctcagaagagctgaagatattgcatttcatgttgcactctttattgcaaagaataaaggaagctatgtaaactactacatgtatcatggaggaaccaattttggaagaacaacttccgagtttgtgactacaagttattacgatgaagctcctcttgatgagtatggtataccaaaggaaccaaaatggagtcatctcaaggagttgcatgctgcagtgaagttgtccatcagtcctctacttgctggagaacaaaccgtcgtcaatttgggtcaatttcaaacagcctatgtctacaaagctcaatctggtgaatgtgctgctttcttggtgaacaatggctctaaagatgccgctgtccaatttcagaactctccttatcaattgtctccaaagtcaattagtatcttaccagactgtaaaaatgtgactttcaacactggaaaggtaagcgcacaacaagcaacaagatcatggacaccagctcaaaagtttgattcacctcagaattggcaagagtacaaagaagccattcccacttatgatgacacctctctaagagagaacataatagtagaccaaatgagaactacaaatgatcgttctgattatctgtggtacactttcagctttcagcatgactctcctaatccagaatccacattaaacgtgcaaacacgcggacatatcctgcattcattcgtaaacggagtacttgtaggatctggacatggagtgctcaggaatacaggtttttccttggagaataagattactctgaataaggggataaaccatgtctccctgctaagtgcaatggttggactgccggactctggagcatatctagagcgtagagattatggattacagagtgtgaagattaacgataaagatttcggcaaatatgcatggggataccagactttatttgatgcaccagcagggaatgaccctgttgcattatatcttggttccatgggaaagggtgaagtttggatcaatggtcaaagcattggtcgatattgggtctccttccacaccccaaaagggactccttcacagacatggtaccatgtacctcgatcttttctgaagcctactggaaacttgttagttctcattgaagaagaaactggagacccggttaagatatctctggacaaagtaaattatagttttcaatga

Protein Analysis

552

Amino Acids

61.74

Weight (kDa)

5.98

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1542
AccB1I GGYRCC 1 cut(s) 1542
AccB7I CCANNNNNTGG 1 cut(s) 226
AccI GTMKAC 4 cut(s) 144, 640, 765, 1047
AccII CGCG 1 cut(s) 1152
AciI CCGC 5 cut(s) 183, 233, 284, 825, 1152
AclWI GGATC 2 cut(s) 1201, 1478
AcuI CTGAAG 2 cut(s) 504, 1586
AfaI GTAC 7 cut(s) 170, 218, 992, 1091, 1185, 1544, 1551
AfiI CCNNNNNNNGG 3 cut(s) 226, 1307, 1521
AflIII ACRYGT 1 cut(s) 549
AgsI TTSAA 5 cut(s) 296, 752, 907, 1598, 1655
AhlI ACTAGT 1 cut(s) 19
AjnI CCWGG 1 cut(s) 308
AluBI AGCT 6 cut(s) 482, 534, 620, 773, 956, 1101
AluI AGCT 6 cut(s) 482, 534, 620, 773, 956, 1101
Alw21I GWGCWC 1 cut(s) 1212
Alw26I GTCTC 4 cut(s) 864, 1276, 1507, 1605
AlwI GGATC 2 cut(s) 1201, 1478
AoxI GGCC 2 cut(s) 289, 391
ApeKI GCWGC 3 cut(s) 272, 683, 791
ArsI GACNNNNNNTTYG 2 cut(s) 1474, 1506
Asp700I GAANNNNTTC 2 cut(s) 583, 1002
Asp718I GGTACC 1 cut(s) 1542
AspLEI GCGC 2 cut(s) 344, 926
AspS9I GGNCC 4 cut(s) 185, 251, 289, 392
AsuC2I CCSGG 3 cut(s) 75, 339, 1616
AsuHPI GGTGA 6 cut(s) 22, 470, 794, 814, 963, 1472
AvaII GGWCC 2 cut(s) 185, 251
BaeGI GKGCMC 1 cut(s) 309
BanI GGYRCC 1 cut(s) 1542
Bbv12I GWGCWC 1 cut(s) 1212
BbvI GCAGC 3 cut(s) 259, 670, 778
BccI CCATC 1 cut(s) 707
BciT130I CCWGG 1 cut(s) 310
BciVI GTATCC 1 cut(s) 1382
BclI TGATCA 1 cut(s) 348
BcnI CCSGG 3 cut(s) 75, 339, 1616
BcoDI GTCTC 4 cut(s) 864, 1276, 1507, 1605
BcuI ACTAGT 1 cut(s) 19
BfaI CTAG 2 cut(s) 20, 1319
BfmI CTRYAG 1 cut(s) 684
BfoI RGCGCY 1 cut(s) 345
BfuI GTATCC 1 cut(s) 1382
BisI GCNGC 5 cut(s) 234, 273, 684, 792, 825
BlsI GCNGC 5 cut(s) 235, 274, 685, 793, 826
BmcAI AGTACT 1 cut(s) 1185
Bme1390I CCNGG 4 cut(s) 75, 310, 339, 1616
Bme18I GGWCC 2 cut(s) 185, 251
BmgT120I GGNCC 4 cut(s) 185, 251, 289, 392
BmiI GGNNCC 5 cut(s) 252, 565, 651, 1447, 1544
BmrFI CCNGG 4 cut(s) 75, 310, 339, 1616
BmsI GCATC 4 cut(s) 284, 322, 811, 1396
BpmI CTGGAG 3 cut(s) 738, 1329, 1629
Bpu10I CCTNAGC 1 cut(s) 1211
BpuEI CTTGAG 1 cut(s) 653
BpuMI CCSGG 3 cut(s) 75, 339, 1616
BsaI GGTCTC 2 cut(s) 1507, 1605
BsaJI CCNNGG 5 cut(s) 279, 308, 309, 1230, 1449
BsaWI WCCGGW 1 cut(s) 87
BsaXI ACNNNNNCTCC 6 cut(s) 1173, 1203, 1256, 1286, 1602, 1632
Bsc4I CCNNNNNNNGG 3 cut(s) 226, 1307, 1521
Bse1I ACTGG 5 cut(s) 304, 437, 916, 1579, 1612
Bse3DI GCAATG 2 cut(s) 367, 1293
BseBI CCWGG 1 cut(s) 310
BseDI CCNNGG 5 cut(s) 279, 308, 309, 1230, 1449
BseGI GGATG 1 cut(s) 275
BseLI CCNNNNNNNGG 3 cut(s) 226, 1307, 1521
BseMI GCAATG 2 cut(s) 367, 1293
BseMII CTCAG 3 cut(s) 487, 989, 1225
BseNI ACTGG 5 cut(s) 304, 437, 916, 1579, 1612
BseRI GAGGAG 1 cut(s) 612
BseSI GKGCMC 1 cut(s) 309
BseXI GCAGC 3 cut(s) 259, 670, 778
Bsh1236I CGCG 1 cut(s) 1152
BshFI GGCC 2 cut(s) 291, 393
BshNI GGYRCC 1 cut(s) 1542
BsiHKAI GWGCWC 1 cut(s) 1212
BsiSI CCGG 5 cut(s) 74, 88, 339, 1301, 1616
BslFI GGGAC 3 cut(s) 8, 264, 1537
BslI CCNNNNNNNGG 3 cut(s) 226, 1307, 1521
BsmAI GTCTC 4 cut(s) 864, 1276, 1507, 1605
BsmFI GGGAC 3 cut(s) 8, 264, 1537
BsmI GAATGC 1 cut(s) 1165
BsnI GGCC 2 cut(s) 291, 393
Bso31I GGTCTC 2 cut(s) 1507, 1605
Bsp1286I GDGCHC 2 cut(s) 309, 1212
Bsp143I GATC 6 cut(s) 348, 941, 1069, 1193, 1470, 1556
Bsp19I CCATGG 2 cut(s) 279, 1449
BspACI CCGC 5 cut(s) 183, 233, 284, 825, 1152
BspANI GGCC 2 cut(s) 291, 393
BspCNI CTCAG 3 cut(s) 486, 988, 1224
BspFNI CGCG 1 cut(s) 1152
BspHI TCATGA 1 cut(s) 241
BspLI GGNNCC 5 cut(s) 252, 565, 651, 1447, 1544
BspMAI CTGCAG 1 cut(s) 688
BspPI GGATC 2 cut(s) 1201, 1478
BspQI GCTCTTC 1 cut(s) 472
BspT107I GGYRCC 1 cut(s) 1542
BspTNI GGTCTC 2 cut(s) 1507, 1605
BsrDI GCAATG 2 cut(s) 367, 1293
BsrI ACTGG 5 cut(s) 304, 437, 916, 1579, 1612
BssECI CCNNGG 5 cut(s) 279, 308, 309, 1230, 1449
BssMI GATC 6 cut(s) 348, 941, 1069, 1193, 1470, 1556
BssNAI GTATAC 1 cut(s) 641
BssT1I CCWWGG 3 cut(s) 279, 1230, 1449
Bst1107I GTATAC 1 cut(s) 641
Bst2UI CCWGG 1 cut(s) 310
Bst4CI ACNGT 4 cut(s) 105, 168, 730, 890
Bst6I CTCTTC 1 cut(s) 472
BstC8I GCNNGC 5 cut(s) 323, 358, 391, 414, 681
BstDEI CTNAG 5 cut(s) 473, 975, 1028, 1211, 1280
BstDSI CCRYGG 2 cut(s) 279, 1449
BstF5I GGATG 1 cut(s) 275
BstFNI CGCG 1 cut(s) 1152
BstH2I RGCGCY 1 cut(s) 345
BstHHI GCGC 2 cut(s) 344, 926
BstKTI GATC 6 cut(s) 351, 944, 1072, 1196, 1473, 1559
BstMAI GTCTC 4 cut(s) 864, 1276, 1507, 1605
BstMBI GATC 6 cut(s) 348, 941, 1069, 1193, 1470, 1556
BstMWI GCNNNNNNNGC 3 cut(s) 281, 341, 932
BstNI CCWGG 1 cut(s) 310
BstNSI RCATGY 3 cut(s) 360, 553, 683
BstSCI CCNGG 4 cut(s) 73, 308, 337, 1614
BstSFI CTRYAG 1 cut(s) 684
BstSLI GKGCMC 1 cut(s) 309
BstUI CGCG 1 cut(s) 1152
BstV1I GCAGC 3 cut(s) 259, 670, 778
BstX2I RGATCY 1 cut(s) 1193
BstXI CCANNNNNNTGG 1 cut(s) 420
BstYI RGATCY 1 cut(s) 1193
BstZ17I GTATAC 1 cut(s) 641
BsuI GTATCC 1 cut(s) 1382
BsuRI GGCC 2 cut(s) 291, 393
BtgI CCRYGG 2 cut(s) 279, 1449
BtsCI GGATG 1 cut(s) 275
BtsI GCAGTG 1 cut(s) 693
BtsIMutI CAGTG 2 cut(s) 693, 909
Cac8I GCNNGC 5 cut(s) 323, 358, 391, 414, 681
CciI TCATGA 1 cut(s) 241
CfoI GCGC 2 cut(s) 344, 926
Cfr13I GGNCC 4 cut(s) 185, 251, 289, 392
CpoI CGGWCCG 1 cut(s) 185
Csp6I GTAC 7 cut(s) 169, 217, 991, 1090, 1184, 1543, 1550
CspI CGGWCCG 1 cut(s) 185
CviQI GTAC 7 cut(s) 169, 217, 991, 1090, 1184, 1543, 1550
DdeI CTNAG 5 cut(s) 473, 975, 1028, 1211, 1280
DpnI GATC 6 cut(s) 350, 943, 1071, 1195, 1472, 1558
DpnII GATC 6 cut(s) 348, 941, 1069, 1193, 1470, 1556
Eam1104I CTCTTC 1 cut(s) 472
EarI CTCTTC 1 cut(s) 472
EciI GGCGGA 2 cut(s) 198, 299
Eco130I CCWWGG 3 cut(s) 279, 1230, 1449
Eco31I GGTCTC 2 cut(s) 1507, 1605
Eco32I GATATC 1 cut(s) 1626
Eco47I GGWCC 2 cut(s) 185, 251
Eco57I CTGAAG 2 cut(s) 504, 1586
EcoO109I RGGNCCY 2 cut(s) 251, 289
EcoRII CCWGG 1 cut(s) 308
EcoRV GATATC 1 cut(s) 1626
EcoT14I CCWWGG 3 cut(s) 279, 1230, 1449
EcoT22I ATGCAT 2 cut(s) 358, 1384
ErhI CCWWGG 3 cut(s) 279, 1230, 1449
FalI AAGNNNNNCTT 4 cut(s) 568, 600, 609, 641
FaqI GGGAC 3 cut(s) 8, 264, 1537
FbaI TGATCA 1 cut(s) 348
FblI GTMKAC 4 cut(s) 144, 640, 765, 1047
Fnu4HI GCNGC 5 cut(s) 234, 273, 684, 792, 825
FokI GGATG 1 cut(s) 262
Fsp4HI GCNGC 5 cut(s) 234, 273, 684, 792, 825
FspBI CTAG 2 cut(s) 20, 1319
GlaI GCGC 2 cut(s) 343, 925
GluI GCNGC 5 cut(s) 234, 273, 684, 792, 825
GsuI CTGGAG 3 cut(s) 738, 1329, 1629
HaeII RGCGCY 1 cut(s) 345
HaeIII GGCC 2 cut(s) 291, 393
HapII CCGG 5 cut(s) 74, 88, 339, 1301, 1616
HhaI GCGC 2 cut(s) 344, 926
Hin6I GCGC 2 cut(s) 342, 924
HinP1I GCGC 2 cut(s) 342, 924
HinfI GANTC 6 cut(s) 661, 968, 1112, 1127, 1304, 1525
HpaII CCGG 5 cut(s) 74, 88, 339, 1301, 1616
HphI GGTGA 6 cut(s) 22, 470, 794, 814, 963, 1472
Hpy188I TCNGA 9 cut(s) 66, 94, 476, 589, 840, 978, 1078, 1251, 1566
Hpy188III TCNNGA 8 cut(s) 242, 626, 1124, 1197, 1213, 1308, 1319, 1631
Hpy99I CGWCG 1 cut(s) 734
HpyAV CCTTC 3 cut(s) 302, 1516, 1539
HpyCH4III ACNGT 4 cut(s) 105, 168, 730, 890
HpyCH4IV ACGT 1 cut(s) 1140
HpyF10VI GCNNNNNNNGC 3 cut(s) 281, 341, 932
HpyF3I CTNAG 5 cut(s) 473, 975, 1028, 1211, 1280
HpySE526I ACGT 1 cut(s) 1140
HspAI GCGC 2 cut(s) 342, 924
KpnI GGTACC 1 cut(s) 1546
Ksp22I TGATCA 1 cut(s) 348
Kzo9I GATC 6 cut(s) 348, 941, 1069, 1193, 1470, 1556
LguI GCTCTTC 1 cut(s) 472
LmnI GCTCC 3 cut(s) 340, 625, 1310
Lsp1109I GCAGC 3 cut(s) 259, 670, 778
LweI GCATC 4 cut(s) 284, 322, 811, 1396
MaeI CTAG 2 cut(s) 20, 1319
MaeII ACGT 1 cut(s) 1140
MaeIII GTNAC 3 cut(s) 198, 595, 898
MalI GATC 6 cut(s) 350, 943, 1071, 1195, 1472, 1558
MboI GATC 6 cut(s) 348, 941, 1069, 1193, 1470, 1556
MboII GAAGA 7 cut(s) 473, 489, 497, 588, 1363, 1610, 1613
MfeI CAATTG 1 cut(s) 854
MflI RGATCY 1 cut(s) 1193
MhlI GDGCHC 2 cut(s) 309, 1212
MluCI AATT 9 cut(s) 417, 568, 736, 746, 833, 854, 870, 979, 1642
MlyI GAGTC 4 cut(s) 670, 1106, 1298, 1519
MmeI TCCRAC 1 cut(s) 1273
Mph1103I ATGCAT 2 cut(s) 358, 1384
MroXI GAANNNNTTC 2 cut(s) 583, 1002
MseI TTAA 4 cut(s) 39, 1136, 1356, 1620
MslI CAYNNNNRTG 1 cut(s) 1537
MspA1I CMGCKG 1 cut(s) 827
MspI CCGG 5 cut(s) 74, 88, 339, 1301, 1616
MspR9I CCNGG 4 cut(s) 75, 310, 339, 1616
MunI CAATTG 1 cut(s) 854
Mva1269I GAATGC 1 cut(s) 1165
MvaI CCWGG 1 cut(s) 310
MvnI CGCG 1 cut(s) 1152
MwoI GCNNNNNNNGC 3 cut(s) 281, 341, 932
NciI CCSGG 3 cut(s) 75, 339, 1616
NcoI CCATGG 2 cut(s) 279, 1449
NdeII GATC 6 cut(s) 348, 941, 1069, 1193, 1470, 1556
NlaIV GGNNCC 5 cut(s) 252, 565, 651, 1447, 1544
NmuCI GTSAC 3 cut(s) 198, 595, 898
NsiI ATGCAT 2 cut(s) 358, 1384
NspI RCATGY 3 cut(s) 360, 553, 683
PaeI GCATGC 2 cut(s) 360, 683
PagI TCATGA 1 cut(s) 241
PasI CCCWGGG 1 cut(s) 309
PciI ACATGT 1 cut(s) 549
PciSI GCTCTTC 1 cut(s) 472
PctI GAATGC 1 cut(s) 1165
PdmI GAANNNNTTC 2 cut(s) 583, 1002
PfeI GAWTC 2 cut(s) 968, 1127
PflMI CCANNNNNTGG 1 cut(s) 226
PkrI GCNGC 5 cut(s) 235, 274, 685, 793, 826
PleI GAGTC 4 cut(s) 669, 1106, 1298, 1519
PpsI GAGTC 4 cut(s) 669, 1106, 1298, 1519
PpuMI RGGWCCY 1 cut(s) 251
PscI ACATGT 1 cut(s) 549
Psp5II RGGWCCY 1 cut(s) 251
Psp6I CCWGG 1 cut(s) 308
PspGI CCWGG 1 cut(s) 308
PspN4I GGNNCC 5 cut(s) 252, 565, 651, 1447, 1544
PspPI GGNCC 4 cut(s) 185, 251, 289, 392
PspPPI RGGWCCY 1 cut(s) 251
PstI CTGCAG 1 cut(s) 688
PsuI RGATCY 1 cut(s) 1193
RsaI GTAC 7 cut(s) 170, 218, 992, 1091, 1185, 1544, 1551
RsaNI GTAC 7 cut(s) 169, 217, 991, 1090, 1184, 1543, 1550
RseI CAYNNNNRTG 1 cut(s) 1537
Rsr2I CGGWCCG 1 cut(s) 185
RsrII CGGWCCG 1 cut(s) 185
SapI GCTCTTC 1 cut(s) 472
SaqAI TTAA 4 cut(s) 39, 1136, 1356, 1620
SatI GCNGC 5 cut(s) 234, 273, 684, 792, 825
Sau3AI GATC 6 cut(s) 348, 941, 1069, 1193, 1470, 1556
Sau96I GGNCC 4 cut(s) 185, 251, 289, 392
ScaI AGTACT 1 cut(s) 1185
SchI GAGTC 4 cut(s) 670, 1106, 1298, 1519
ScrFI CCNGG 4 cut(s) 75, 310, 339, 1616
SduI GDGCHC 2 cut(s) 309, 1212
SfaNI GCATC 4 cut(s) 284, 322, 811, 1396
SfcI CTRYAG 1 cut(s) 684
SinI GGWCC 2 cut(s) 185, 251
SmiMI CAYNNNNRTG 1 cut(s) 1537
SmlI CTYRAG 1 cut(s) 668
SmoI CTYRAG 1 cut(s) 668
SpeI ACTAGT 1 cut(s) 19
SphI GCATGC 2 cut(s) 360, 683
Sse9I AATT 9 cut(s) 417, 568, 736, 746, 833, 854, 870, 979, 1642
SsiI CCGC 5 cut(s) 183, 233, 284, 825, 1152
SspMI CTAG 2 cut(s) 20, 1319
StyD4I CCNGG 4 cut(s) 73, 308, 337, 1614
StyI CCWWGG 3 cut(s) 279, 1230, 1449
TaaI ACNGT 4 cut(s) 105, 168, 730, 890
TaiI ACGT 1 cut(s) 1143
TaqI TCGA 2 cut(s) 1492, 1555
TaqII GACCGA 1 cut(s) 202
TasI AATT 9 cut(s) 417, 568, 736, 746, 833, 854, 870, 979, 1642
TatI WGTACW 2 cut(s) 990, 1183
TauI GCSGC 2 cut(s) 236, 827
TfiI GAWTC 2 cut(s) 968, 1127
Tru1I TTAA 4 cut(s) 39, 1136, 1356, 1620
Tru9I TTAA 4 cut(s) 39, 1136, 1356, 1620
TscAI CASTG 2 cut(s) 693, 916
TseFI GTSAC 3 cut(s) 198, 595, 898
TseI GCWGC 3 cut(s) 272, 683, 791
Tsp45I GTSAC 3 cut(s) 198, 595, 898
TspDTI ATGAA 7 cut(s) 114, 167, 230, 258, 488, 630, 1158
TspGWI ACGGA 1 cut(s) 1194
TspRI CASTG 2 cut(s) 693, 916
Van91I CCANNNNNTGG 1 cut(s) 226
VpaK11BI GGWCC 2 cut(s) 185, 251
XbaI TCTAGA 1 cut(s) 1318
XceI RCATGY 3 cut(s) 360, 553, 683
XmiI GTMKAC 4 cut(s) 144, 640, 765, 1047
XmnI GAANNNNTTC 2 cut(s) 583, 1002
XspI CTAG 2 cut(s) 20, 1319
ZrmI AGTACT 1 cut(s) 1185
Zsp2I ATGCAT 2 cut(s) 358, 1384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.