Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0011851

Physical Location & Seq

Genomic Coordinates Forward (+)

18128523 .. 18131932

Gene Structure 3410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00178440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGTGTGCCTTAGAATTGGACCCTTCATTCAGAGTGAATGGTCTTATGGGAACATTCCGGGGCATTGTTTTCCGGTCTGATAATGAACCGTATAAGGCTGAAATGCAGAGGTTTACAGCAAAAATAGTAGACCTAATGAAATCAAATGGACTGTACGCTTCACAAGGCGGACCGATTATATTGTCACAGATTGAGAACGAGTACCAAAATGTGGAAGCGGCGTTTCATGAAAAGGGACCTCCTTATGTTCTTTGGGCTGCATCCATGGCGGAGGGCCTTCAAACTGGTGTGCCCTGGGTTATGTGCAAGCAAAATGATGCTCCCGGCGCTGTGATCAATGCATGTAATGGGTTGAAGTGTGGAGAAACCTTTGCTGGCCCAAATGCCCCTAATAAGCCAGCAATTTGGACAGAGGACTGGACAAGCCAATACCTTGTATATGGTGAAGAACCATACCTCAGAAGAGCTGAAGATATTGCATTTCATGTTGCACTCTTTATTGCAAAGAATAAAGGAAGCTATGTAAACTACTACATGTATCATGGAGGAACCAATTTTGGAAGAACAACTTCCGAGTTTGTGACTACTAGTTATTACGATGAAGCTCCTCTTGATGAGTATGGTATACCAAAGGAACCAAAATGGACTCATCTCAAGGAGTTGCATGCTGCAGTGAAGTTGTCCATCAGTCCTCTACTTGCTGGAGAACAAACCGTTGTCAATTTGGGTCAATTTCAAACAGCCTATGTCTACAAAGCTCAATCTGGTGAATGTGCTGCTTTCTTGGTGAACAATGGCTCTAAAGATGCCACTGTCCAATTTCAGAACTCTCCTTATCAATTGTCTCCAAAGTCAATTAGTATCTTACCAGACTGTAAAAATGTGGCTTTCAACACTGGAAAGGTAAGCGCACAACATGCAACAAGATCATGGACACCAGCTCAAAAGTTTGATTCACCTCAGAATTGGCAAGAGTACAAAGAAGCCATTCCCACTTATGATGACACCTCTCTAAGAGAGAACATAATAGTAGACCAAATGAGAACTACAAATGATCGTTCTGATTATCTGTGGTACACTTTCAGCTTTCAGCATGACTCTCCTAATCCAGAATCAACATTAAAGGTGCAAACACGCGGACATATCCTGCATTCATTCGTAAACGGAGTACTTGTAGGATCTGGACATGGAGTGCTCAGGAATACAGGTTTTTCCTTGGAGAATAAGATTACTCTGAAAAAGGGGATAAACCATGTCTCCCTGCTAAATGCAATGGTTGGACTGCCGGACTCTGGAGCATATCTAGAGCGTAGAGATTACGGATTACAGAGTGTGAAGATTGACGATAAAGATTTCGGCACATATGCATGGGGATACCAGGTCGGGTTGTATGGAGAGAACTTACAAATCCATACAGACACAAGTAAAGTTCAATGGAACAGATTAAGCTATTCAAAACAACCACTGACATGGTATAAGACTTTATTTGATGCACCAGCAGGAAATGACCCTGTTGCATTATATCTTGGTTCCATGGGAAAGGGTGAAGTTTGGATCAATGGTCAAAGCATTGGTCGATATTGGGTCTCCTTCCACACCCCAAAAGGGACTCCTTCACAGACATGGTACCATGTACCTCGATCTTTCCTTAAGCCTACTGGAAACTTGTTAGTCCTCATTGAAGAAGAAACTGGAGACCCGGTTAAGATATCTCTGGACAAAGTAAATTATAGTTTACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

580

Amino Acids

64.94

Weight (kDa)

6.18

Isoelectric Point (pI)

34.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	21 - 224	7.6e-56	Glycosyl hydrolases family 35
GHD	PF17834	247 - 302	3.6e-23	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	489 - 555	9.5e-25	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011851)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77410 AT1G77410 AT1G77410 AT1G77410
fragaria_vesca	FvH4_2g27470
prunus_persica	Prupe.1G492800_v2.0.a1 Prupe.1G492800_v2.0.a1 Prupe.1G492800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0296311
rosa_laevigata	RLG00000011707
rosa_multiflora	Rmu_sc0001478.1_g000001 Rmu_sc0004708.1_g000001 Rmu_sc0012554.1_g000001
rosa_roxburghii	Rroxscaffold_7G00171640 Rroxscaffold_7G00178440
rosa_rugosa	Rorug06G0261000
rosa_samantha	Rh6BG380800 Rh6CG386000
rosa_wichuraiana	Rw6G032490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1626
AccB1I	GGYRCC	1 cut(s)	1626
AccB7I	CCANNNNNTGG	1 cut(s)	211
AccI	GTMKAC	4 cut(s)	129, 625, 750, 1032
AccII	CGCG	1 cut(s)	1137
AciI	CCGC	4 cut(s)	168, 218, 269, 1137
AclWI	GGATC	2 cut(s)	1186, 1562
AcuI	CTGAAG	1 cut(s)	489
AfaI	GTAC	7 cut(s)	155, 203, 977, 1076, 1170, 1628, 1635
AfiI	CCNNNNNNNGG	3 cut(s)	211, 1292, 1605
AflII	CTTAAG	1 cut(s)	1649
AflIII	ACRYGT	1 cut(s)	534
AgsI	TTSAA	7 cut(s)	281, 355, 737, 892, 1433, 1455, 1682
AhlI	ACTAGT	1 cut(s)	587
AjnI	CCWGG	2 cut(s)	293, 1377
AluBI	AGCT	7 cut(s)	467, 519, 605, 758, 941, 1086, 1449
AluI	AGCT	7 cut(s)	467, 519, 605, 758, 941, 1086, 1449
Alw21I	GWGCWC	1 cut(s)	1197
Alw26I	GTCTC	4 cut(s)	849, 1261, 1591, 1689
AlwI	GGATC	2 cut(s)	1186, 1562
AoxI	GGCC	2 cut(s)	274, 376
ApeKI	GCWGC	3 cut(s)	257, 668, 776
ArsI	GACNNNNNNTTYG	2 cut(s)	1558, 1590
Asp700I	GAANNNNTTC	2 cut(s)	568, 987
Asp718I	GGTACC	1 cut(s)	1626
AspLEI	GCGC	2 cut(s)	329, 911
AspS9I	GGNCC	5 cut(s)	19, 170, 236, 274, 377
AsuC2I	CCSGG	3 cut(s)	59, 324, 1700
AsuHPI	GGTGA	5 cut(s)	455, 779, 799, 948, 1556
AvaII	GGWCC	3 cut(s)	19, 170, 236
BaeGI	GKGCMC	1 cut(s)	294
BanI	GGYRCC	1 cut(s)	1626
Bbv12I	GWGCWC	1 cut(s)	1197
BbvI	GCAGC	3 cut(s)	244, 655, 763
BccI	CCATC	1 cut(s)	692
BciT130I	CCWGG	2 cut(s)	295, 1379
BciVI	GTATCC	1 cut(s)	1367
BclI	TGATCA	1 cut(s)	333
BcnI	CCSGG	3 cut(s)	59, 324, 1700
BcoDI	GTCTC	4 cut(s)	849, 1261, 1591, 1689
BcuI	ACTAGT	1 cut(s)	587
BfaI	CTAG	2 cut(s)	588, 1304
BfmI	CTRYAG	1 cut(s)	669
BfoI	RGCGCY	1 cut(s)	330
BfrI	CTTAAG	1 cut(s)	1649
BfuI	GTATCC	1 cut(s)	1367
BisI	GCNGC	4 cut(s)	219, 258, 669, 777
BlsI	GCNGC	4 cut(s)	220, 259, 670, 778
BmcAI	AGTACT	1 cut(s)	1170
Bme1390I	CCNGG	5 cut(s)	59, 295, 324, 1379, 1700
Bme18I	GGWCC	3 cut(s)	19, 170, 236
BmgT120I	GGNCC	5 cut(s)	19, 170, 236, 274, 377
BmiI	GGNNCC	6 cut(s)	21, 237, 550, 636, 1531, 1628
BmrFI	CCNGG	5 cut(s)	59, 295, 324, 1379, 1700
BmsI	GCATC	4 cut(s)	269, 307, 796, 1480
BpmI	CTGGAG	3 cut(s)	723, 1314, 1713
Bpu10I	CCTNAGC	1 cut(s)	1196
BpuEI	CTTGAG	1 cut(s)	638
BpuMI	CCSGG	3 cut(s)	59, 324, 1700
BsaI	GGTCTC	2 cut(s)	1591, 1689
BsaJI	CCNNGG	6 cut(s)	58, 264, 293, 294, 1215, 1533
BsaWI	WCCGGW	1 cut(s)	72
BsaXI	ACNNNNNCTCC	6 cut(s)	1158, 1188, 1241, 1271, 1686, 1716
Bsc4I	CCNNNNNNNGG	3 cut(s)	211, 1292, 1605
Bse1I	ACTGG	5 cut(s)	289, 422, 901, 1663, 1696
Bse3DI	GCAATG	1 cut(s)	1278
BseBI	CCWGG	2 cut(s)	295, 1379
BseDI	CCNNGG	6 cut(s)	58, 264, 293, 294, 1215, 1533
BseGI	GGATG	1 cut(s)	260
BseLI	CCNNNNNNNGG	3 cut(s)	211, 1292, 1605
BseMI	GCAATG	1 cut(s)	1278
BseMII	CTCAG	3 cut(s)	472, 974, 1210
BseNI	ACTGG	5 cut(s)	289, 422, 901, 1663, 1696
BseRI	GAGGAG	1 cut(s)	597
BseSI	GKGCMC	1 cut(s)	294
BseXI	GCAGC	3 cut(s)	244, 655, 763
Bsh1236I	CGCG	1 cut(s)	1137
BshFI	GGCC	2 cut(s)	276, 378
BshNI	GGYRCC	1 cut(s)	1626
BsiHKAI	GWGCWC	1 cut(s)	1197
BsiSI	CCGG	5 cut(s)	58, 73, 324, 1286, 1700
BslFI	GGGAC	2 cut(s)	249, 1621
BslI	CCNNNNNNNGG	3 cut(s)	211, 1292, 1605
BsmAI	GTCTC	4 cut(s)	849, 1261, 1591, 1689
BsmFI	GGGAC	2 cut(s)	249, 1621
BsmI	GAATGC	1 cut(s)	1150
BsnI	GGCC	2 cut(s)	276, 378
Bso31I	GGTCTC	2 cut(s)	1591, 1689
Bsp1286I	GDGCHC	2 cut(s)	294, 1197
Bsp143I	GATC	6 cut(s)	333, 926, 1054, 1178, 1554, 1640
Bsp19I	CCATGG	2 cut(s)	264, 1533
BspACI	CCGC	4 cut(s)	168, 218, 269, 1137
BspANI	GGCC	2 cut(s)	276, 378
BspCNI	CTCAG	3 cut(s)	471, 973, 1209
BspFNI	CGCG	1 cut(s)	1137
BspHI	TCATGA	1 cut(s)	226
BspLI	GGNNCC	6 cut(s)	21, 237, 550, 636, 1531, 1628
BspMAI	CTGCAG	1 cut(s)	673
BspPI	GGATC	2 cut(s)	1186, 1562
BspQI	GCTCTTC	1 cut(s)	457
BspT107I	GGYRCC	1 cut(s)	1626
BspTI	CTTAAG	1 cut(s)	1649
BspTNI	GGTCTC	2 cut(s)	1591, 1689
BsrDI	GCAATG	1 cut(s)	1278
BsrI	ACTGG	5 cut(s)	289, 422, 901, 1663, 1696
BssECI	CCNNGG	6 cut(s)	58, 264, 293, 294, 1215, 1533
BssMI	GATC	6 cut(s)	333, 926, 1054, 1178, 1554, 1640
BssNAI	GTATAC	1 cut(s)	626
BssT1I	CCWWGG	3 cut(s)	264, 1215, 1533
Bst1107I	GTATAC	1 cut(s)	626
Bst2UI	CCWGG	2 cut(s)	295, 1379
Bst4CI	ACNGT	5 cut(s)	90, 153, 715, 814, 875
Bst6I	CTCTTC	1 cut(s)	457
BstAFI	CTTAAG	1 cut(s)	1649
BstAPI	GCANNNNNTGC	1 cut(s)	917
BstC8I	GCNNGC	4 cut(s)	308, 376, 399, 666
BstDEI	CTNAG	5 cut(s)	10, 458, 960, 1013, 1196
BstDSI	CCRYGG	2 cut(s)	264, 1533
BstF5I	GGATG	1 cut(s)	260
BstFNI	CGCG	1 cut(s)	1137
BstH2I	RGCGCY	1 cut(s)	330
BstHHI	GCGC	2 cut(s)	329, 911
BstKTI	GATC	6 cut(s)	336, 929, 1057, 1181, 1557, 1643
BstMAI	GTCTC	4 cut(s)	849, 1261, 1591, 1689
BstMBI	GATC	6 cut(s)	333, 926, 1054, 1178, 1554, 1640
BstMWI	GCNNNNNNNGC	3 cut(s)	266, 326, 917
BstNI	CCWGG	2 cut(s)	295, 1379
BstNSI	RCATGY	4 cut(s)	345, 538, 668, 920
BstSCI	CCNGG	5 cut(s)	57, 293, 322, 1377, 1698
BstSFI	CTRYAG	1 cut(s)	669
BstSLI	GKGCMC	1 cut(s)	294
BstUI	CGCG	1 cut(s)	1137
BstV1I	GCAGC	3 cut(s)	244, 655, 763
BstX2I	RGATCY	1 cut(s)	1178
BstXI	CCANNNNNNTGG	2 cut(s)	405, 1470
BstYI	RGATCY	1 cut(s)	1178
BstZ17I	GTATAC	1 cut(s)	626
BsuI	GTATCC	1 cut(s)	1367
BsuRI	GGCC	2 cut(s)	276, 378
BtgI	CCRYGG	2 cut(s)	264, 1533
BtsCI	GGATG	1 cut(s)	260
BtsI	GCAGTG	1 cut(s)	678
BtsIMutI	CAGTG	4 cut(s)	678, 810, 894, 1463
Cac8I	GCNNGC	4 cut(s)	308, 376, 399, 666
CciI	TCATGA	1 cut(s)	226
CfoI	GCGC	2 cut(s)	329, 911
Cfr13I	GGNCC	5 cut(s)	19, 170, 236, 274, 377
CpoI	CGGWCCG	1 cut(s)	170
CsiI	ACCWGGT	1 cut(s)	1377
Csp6I	GTAC	7 cut(s)	154, 202, 976, 1075, 1169, 1627, 1634
CspI	CGGWCCG	1 cut(s)	170
CviQI	GTAC	7 cut(s)	154, 202, 976, 1075, 1169, 1627, 1634
DdeI	CTNAG	5 cut(s)	10, 458, 960, 1013, 1196
DpnI	GATC	6 cut(s)	335, 928, 1056, 1180, 1556, 1642
DpnII	GATC	6 cut(s)	333, 926, 1054, 1178, 1554, 1640
Eam1104I	CTCTTC	1 cut(s)	457
EarI	CTCTTC	1 cut(s)	457
EciI	GGCGGA	2 cut(s)	183, 284
Eco130I	CCWWGG	3 cut(s)	264, 1215, 1533
Eco31I	GGTCTC	2 cut(s)	1591, 1689
Eco32I	GATATC	1 cut(s)	1710
Eco47I	GGWCC	3 cut(s)	19, 170, 236
Eco57I	CTGAAG	1 cut(s)	489
EcoO109I	RGGNCCY	2 cut(s)	236, 274
EcoRII	CCWGG	2 cut(s)	293, 1377
EcoRV	GATATC	1 cut(s)	1710
EcoT14I	CCWWGG	3 cut(s)	264, 1215, 1533
EcoT22I	ATGCAT	2 cut(s)	343, 1369
ErhI	CCWWGG	3 cut(s)	264, 1215, 1533
FalI	AAGNNNNNCTT	4 cut(s)	553, 585, 594, 626
FaqI	GGGAC	2 cut(s)	249, 1621
FauNDI	CATATG	1 cut(s)	1363
FbaI	TGATCA	1 cut(s)	333
FblI	GTMKAC	4 cut(s)	129, 625, 750, 1032
Fnu4HI	GCNGC	4 cut(s)	219, 258, 669, 777
FokI	GGATG	1 cut(s)	247
Fsp4HI	GCNGC	4 cut(s)	219, 258, 669, 777
FspBI	CTAG	2 cut(s)	588, 1304
GlaI	GCGC	2 cut(s)	328, 910
GluI	GCNGC	4 cut(s)	219, 258, 669, 777
GsuI	CTGGAG	3 cut(s)	723, 1314, 1713
HaeII	RGCGCY	1 cut(s)	330
HaeIII	GGCC	2 cut(s)	276, 378
HapII	CCGG	5 cut(s)	58, 73, 324, 1286, 1700
HhaI	GCGC	2 cut(s)	329, 911
Hin6I	GCGC	2 cut(s)	327, 909
HinP1I	GCGC	2 cut(s)	327, 909
HinfI	GANTC	6 cut(s)	646, 953, 1097, 1112, 1289, 1609
HpaII	CCGG	5 cut(s)	58, 73, 324, 1286, 1700
HphI	GGTGA	5 cut(s)	455, 779, 799, 948, 1556
Hpy188I	TCNGA	8 cut(s)	32, 79, 461, 574, 825, 963, 1063, 1236
Hpy188III	TCNNGA	8 cut(s)	227, 611, 1109, 1182, 1198, 1293, 1304, 1715
HpyAV	CCTTC	4 cut(s)	33, 287, 1600, 1623
HpyCH4III	ACNGT	5 cut(s)	90, 153, 715, 814, 875
HpyF10VI	GCNNNNNNNGC	3 cut(s)	266, 326, 917
HpyF3I	CTNAG	5 cut(s)	10, 458, 960, 1013, 1196
HspAI	GCGC	2 cut(s)	327, 909
KpnI	GGTACC	1 cut(s)	1630
Ksp22I	TGATCA	1 cut(s)	333
Kzo9I	GATC	6 cut(s)	333, 926, 1054, 1178, 1554, 1640
LguI	GCTCTTC	1 cut(s)	457
LmnI	GCTCC	3 cut(s)	325, 610, 1295
Lsp1109I	GCAGC	3 cut(s)	244, 655, 763
LweI	GCATC	4 cut(s)	269, 307, 796, 1480
MabI	ACCWGGT	1 cut(s)	1377
MaeI	CTAG	2 cut(s)	588, 1304
MaeIII	GTNAC	2 cut(s)	183, 580
MalI	GATC	6 cut(s)	335, 928, 1056, 1180, 1556, 1642
MboI	GATC	6 cut(s)	333, 926, 1054, 1178, 1554, 1640
MboII	GAAGA	7 cut(s)	458, 474, 482, 573, 1348, 1694, 1697
MfeI	CAATTG	1 cut(s)	839
MflI	RGATCY	1 cut(s)	1178
MhlI	GDGCHC	2 cut(s)	294, 1197
MlyI	GAGTC	4 cut(s)	640, 1091, 1283, 1603
MmeI	TCCRAC	1 cut(s)	1258
Mph1103I	ATGCAT	2 cut(s)	343, 1369
MroXI	GAANNNNTTC	2 cut(s)	568, 987
MseI	TTAA	4 cut(s)	1121, 1445, 1650, 1704
MslI	CAYNNNNRTG	3 cut(s)	1366, 1468, 1621
MspCI	CTTAAG	1 cut(s)	1649
MspI	CCGG	5 cut(s)	58, 73, 324, 1286, 1700
MspR9I	CCNGG	5 cut(s)	59, 295, 324, 1379, 1700
MunI	CAATTG	1 cut(s)	839
Mva1269I	GAATGC	1 cut(s)	1150
MvaI	CCWGG	2 cut(s)	295, 1379
MvnI	CGCG	1 cut(s)	1137
MwoI	GCNNNNNNNGC	3 cut(s)	266, 326, 917
NciI	CCSGG	3 cut(s)	59, 324, 1700
NcoI	CCATGG	2 cut(s)	264, 1533
NdeI	CATATG	1 cut(s)	1363
NdeII	GATC	6 cut(s)	333, 926, 1054, 1178, 1554, 1640
NlaIV	GGNNCC	6 cut(s)	21, 237, 550, 636, 1531, 1628
NmuCI	GTSAC	2 cut(s)	183, 580
NsiI	ATGCAT	2 cut(s)	343, 1369
NspI	RCATGY	4 cut(s)	345, 538, 668, 920
PaeI	GCATGC	1 cut(s)	668
PagI	TCATGA	1 cut(s)	226
PasI	CCCWGGG	1 cut(s)	294
PciI	ACATGT	1 cut(s)	534
PciSI	GCTCTTC	1 cut(s)	457
PctI	GAATGC	1 cut(s)	1150
PdmI	GAANNNNTTC	2 cut(s)	568, 987
PfeI	GAWTC	2 cut(s)	953, 1112
PflMI	CCANNNNNTGG	1 cut(s)	211
PkrI	GCNGC	4 cut(s)	220, 259, 670, 778
PleI	GAGTC	4 cut(s)	640, 1091, 1283, 1603
PpsI	GAGTC	4 cut(s)	640, 1091, 1283, 1603
PpuMI	RGGWCCY	1 cut(s)	236
PscI	ACATGT	1 cut(s)	534
Psp5II	RGGWCCY	1 cut(s)	236
Psp6I	CCWGG	2 cut(s)	293, 1377
PspGI	CCWGG	2 cut(s)	293, 1377
PspN4I	GGNNCC	6 cut(s)	21, 237, 550, 636, 1531, 1628
PspPI	GGNCC	5 cut(s)	19, 170, 236, 274, 377
PspPPI	RGGWCCY	1 cut(s)	236
PstI	CTGCAG	1 cut(s)	673
PsuI	RGATCY	1 cut(s)	1178
RsaI	GTAC	7 cut(s)	155, 203, 977, 1076, 1170, 1628, 1635
RsaNI	GTAC	7 cut(s)	154, 202, 976, 1075, 1169, 1627, 1634
RseI	CAYNNNNRTG	3 cut(s)	1366, 1468, 1621
Rsr2I	CGGWCCG	1 cut(s)	170
RsrII	CGGWCCG	1 cut(s)	170
SapI	GCTCTTC	1 cut(s)	457
SaqAI	TTAA	4 cut(s)	1121, 1445, 1650, 1704
SatI	GCNGC	4 cut(s)	219, 258, 669, 777
Sau3AI	GATC	6 cut(s)	333, 926, 1054, 1178, 1554, 1640
Sau96I	GGNCC	5 cut(s)	19, 170, 236, 274, 377
ScaI	AGTACT	1 cut(s)	1170
SchI	GAGTC	4 cut(s)	640, 1091, 1283, 1603
ScrFI	CCNGG	5 cut(s)	59, 295, 324, 1379, 1700
SduI	GDGCHC	2 cut(s)	294, 1197
SexAI	ACCWGGT	1 cut(s)	1377
SfaNI	GCATC	4 cut(s)	269, 307, 796, 1480
SfcI	CTRYAG	1 cut(s)	669
SinI	GGWCC	3 cut(s)	19, 170, 236
SmiMI	CAYNNNNRTG	3 cut(s)	1366, 1468, 1621
SmlI	CTYRAG	2 cut(s)	653, 1649
SmoI	CTYRAG	2 cut(s)	653, 1649
SpeI	ACTAGT	1 cut(s)	587
SphI	GCATGC	1 cut(s)	668
SsiI	CCGC	4 cut(s)	168, 218, 269, 1137
SspMI	CTAG	2 cut(s)	588, 1304
StyD4I	CCNGG	5 cut(s)	57, 293, 322, 1377, 1698
StyI	CCWWGG	3 cut(s)	264, 1215, 1533
TaaI	ACNGT	5 cut(s)	90, 153, 715, 814, 875
TaqI	TCGA	2 cut(s)	1576, 1639
TaqII	GACCGA	1 cut(s)	187
TatI	WGTACW	2 cut(s)	975, 1168
TauI	GCSGC	1 cut(s)	221
TfiI	GAWTC	2 cut(s)	953, 1112
Tru1I	TTAA	4 cut(s)	1121, 1445, 1650, 1704
Tru9I	TTAA	4 cut(s)	1121, 1445, 1650, 1704
TscAI	CASTG	4 cut(s)	678, 817, 901, 1470
TseFI	GTSAC	2 cut(s)	183, 580
TseI	GCWGC	3 cut(s)	257, 668, 776
Tsp45I	GTSAC	2 cut(s)	183, 580
TspDTI	ATGAA	8 cut(s)	15, 99, 152, 215, 243, 473, 615, 1143
TspGWI	ACGGA	2 cut(s)	1179, 1335
TspRI	CASTG	4 cut(s)	678, 817, 901, 1470
Van91I	CCANNNNNTGG	1 cut(s)	211
Vha464I	CTTAAG	1 cut(s)	1649
VpaK11BI	GGWCC	3 cut(s)	19, 170, 236
XbaI	TCTAGA	1 cut(s)	1303
XceI	RCATGY	4 cut(s)	345, 538, 668, 920
XmiI	GTMKAC	4 cut(s)	129, 625, 750, 1032
XmnI	GAANNNNTTC	2 cut(s)	568, 987
XspI	CTAG	2 cut(s)	588, 1304
ZrmI	AGTACT	1 cut(s)	1170
Zsp2I	ATGCAT	2 cut(s)	343, 1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.