FvH4_2g27710

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
21924291 .. 21924594
304 bp
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UTR
Exon/CDS
Intron
FvH4_2g27710.t1

Sequence Viewer

Length: 276 bp
ATGAGTGGGAGGAAAGTGTCGGACACATCGAATTCCAGCACGAATTTGAATTCGGTTGTGCTGATCACGGATTGGGCGTGGATGCATACGAAAGCGGGGGAGTGTCGAGGAGGGCCAAAGAGTGTGATGGAGAGGTTTGTGAATGTTGGGATTCTGTGTGCTCATGTTATGGTGGGTTTTTGGCCTACTATTTCAGAAGCACCGAGGATGTTGGAGGGTGATATTGATATTCCTAAGTTACCAGATAGGCCAATGCCACTTGGGACTGAGTTATAG

Protein Analysis

92

Amino Acids

9.98

Weight (kDa)

6.04

Isoelectric Point (pI)

31.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018802)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 95
AcsI RAATTY 3 cut(s) 31, 43, 49
AgsI TTSAA 1 cut(s) 49
Alw21I GWGCWC 1 cut(s) 163
AoxI GGCC 3 cut(s) 113, 182, 248
ApoI RAATTY 3 cut(s) 31, 43, 49
AspS9I GGNCC 1 cut(s) 113
AsuHPI GGTGA 1 cut(s) 230
Bbv12I GWGCWC 1 cut(s) 163
BccI CCATC 1 cut(s) 121
BclI TGATCA 1 cut(s) 63
BmgT120I GGNCC 1 cut(s) 113
BmsI GCATC 1 cut(s) 72
BsaJI CCNNGG 1 cut(s) 203
BseDI CCNNGG 1 cut(s) 203
BseGI GGATG 2 cut(s) 87, 213
BseMII CTCAG 1 cut(s) 258
BseRI GAGGAG 1 cut(s) 123
BshFI GGCC 3 cut(s) 115, 184, 250
BsiHKAI GWGCWC 1 cut(s) 163
BsnI GGCC 3 cut(s) 115, 184, 250
Bsp1286I GDGCHC 1 cut(s) 163
Bsp143I GATC 1 cut(s) 63
BspACI CCGC 1 cut(s) 95
BspANI GGCC 3 cut(s) 115, 184, 250
BspCNI CTCAG 1 cut(s) 259
BssECI CCNNGG 1 cut(s) 203
BssMI GATC 1 cut(s) 63
BstDEI CTNAG 2 cut(s) 234, 267
BstF5I GGATG 2 cut(s) 87, 213
BstKTI GATC 1 cut(s) 66
BstMBI GATC 1 cut(s) 63
BsuRI GGCC 3 cut(s) 115, 184, 250
BtsCI GGATG 2 cut(s) 87, 213
Cfr13I GGNCC 1 cut(s) 113
CviAII CATG 1 cut(s) 164
CviJI RGCY 3 cut(s) 115, 184, 250
CviKI_1 RGCY 3 cut(s) 115, 184, 250
DdeI CTNAG 2 cut(s) 234, 267
DpnI GATC 1 cut(s) 65
DpnII GATC 1 cut(s) 63
EcoRI GAATTC 2 cut(s) 31, 49
EcoT22I ATGCAT 1 cut(s) 87
FaeI CATG 1 cut(s) 167
FaiI YATR 4 cut(s) 87, 165, 170, 274
FatI CATG 1 cut(s) 163
FauI CCCGC 1 cut(s) 88
FbaI TGATCA 1 cut(s) 63
FokI GGATG 2 cut(s) 94, 220
HaeIII GGCC 3 cut(s) 115, 184, 250
Hin1II CATG 1 cut(s) 167
HinfI GANTC 1 cut(s) 151
HphI GGTGA 1 cut(s) 230
Hpy188I TCNGA 2 cut(s) 22, 196
HpyCH4V TGCA 1 cut(s) 85
HpyF3I CTNAG 2 cut(s) 234, 267
Hsp92II CATG 1 cut(s) 167
Ksp22I TGATCA 1 cut(s) 63
Kzo9I GATC 1 cut(s) 63
LpnPI CCDG 2 cut(s) 49, 255
LweI GCATC 1 cut(s) 72
MaeIII GTNAC 1 cut(s) 237
MalI GATC 1 cut(s) 65
MboI GATC 1 cut(s) 63
MhlI GDGCHC 1 cut(s) 163
MluCI AATT 3 cut(s) 31, 43, 49
MmeI TCCRAC 1 cut(s) 192
MnlI CCTC 6 cut(s) 3, 101, 104, 126, 198, 208
Mph1103I ATGCAT 1 cut(s) 87
NdeII GATC 1 cut(s) 63
NlaIII CATG 1 cut(s) 167
NsiI ATGCAT 1 cut(s) 87
PcsI WCGNNNNNNNCGW 2 cut(s) 26, 74
PfeI GAWTC 1 cut(s) 151
PspPI GGNCC 1 cut(s) 113
Sau3AI GATC 1 cut(s) 63
Sau96I GGNCC 1 cut(s) 113
SduI GDGCHC 1 cut(s) 163
SetI ASST 1 cut(s) 137
SfaNI GCATC 1 cut(s) 72
Sse9I AATT 3 cut(s) 31, 43, 49
SsiI CCGC 1 cut(s) 95
TaqI TCGA 2 cut(s) 29, 106
TasI AATT 3 cut(s) 31, 43, 49
TfiI GAWTC 1 cut(s) 151
TspGWI ACGGA 1 cut(s) 83
XapI RAATTY 3 cut(s) 31, 43, 49
Zsp2I ATGCAT 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.