FvH4_2g33160

strigolactone esterase DAD2

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
24928066 .. 24939781
11716 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g33160.t1

Sequence Viewer

Length: 810 bp
ATGCCCAGCAACGCCAGGATCTTAGAGGCTCTGAATGTCCGGGTAACCGGGTTGGGCGAGCAGTACCTGGTCCTGGCCCATGGCTTCGGCACTGACCAATCCGCCTGGCAGCGCATTCTCCCTTACTTCAAACCTAACTACCGCATCATCGTATACGACCTCGTCTGCGCCGGAAGTGTCAACCCCGATTACTTCGATTTCAACCGCTACACCAACCTCGACCCCTTCGTCGACGACTTGCTCACCATCCTCGACGCCGTCGGTGTCAAAAAGTGCGCCTACGTCGGCCACTCTGTCTCCGCCATGATCGGCATCCTCGCCTCCATTCGCCGCCCCGAGCTTTTCTCCAAGCTCATCCTCCTCGGCGCTTCTCCAAGGTTTCTGAACGACAGGGACTACCACGGAGGGTTCGAGCAGGAGGAGATTGAGAAATTGTTCTCGGCGATGGAGGCGAATTACTCGGCCTGGGTCAACGGCTTCGCGCCACTAGCCGTTGGAGCCGACGTGCCAGCCGCCGTCCGAGAGTTCAGCCGGACCCTTTTCAACATGCGCCCCGATATCTCGCTCTTCGTTTCGCGGGCCGTCTTCAACAGCGACCTGAGGGAGTTTTTGGGCTTTGTCCGGGTGCCCTGTTTCATAATCCAGACCGCAAGAGACCATTCTGTCCCTGCCTCCGTGGCGAACTACCTGAAAGACCATCTGGGTGGCCGGAACACCATCGTGACGCTCGAGACGGAGGGCCACTTGCCGCATTTGAGCGCGCCGGGTTTGTTGGCCCGTAAGCTCCGCCAGTGTCTGTTGTCGTCGTAG

Protein Analysis

270

Amino Acids

29.97

Weight (kDa)

6.65

Isoelectric Point (pI)

31.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_6 PF12697 23 - 260 6.2e-15 Alpha/beta hydrolase family
Abhydrolase_1 PF00561 23 - 254 1.5e-13 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012366)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 227, 662
AccB1I GGYRCC 1 cut(s) 625
AccI GTMKAC 2 cut(s) 153, 231
AccII CGCG 3 cut(s) 482, 577, 761
AclWI GGATC 1 cut(s) 26
AcoI YGGCCR 2 cut(s) 286, 706
AcyI GRCGYC 1 cut(s) 255
AfaI GTAC 1 cut(s) 65
AfiI CCNNNNNNNGG 1 cut(s) 73
AgsI TTSAA 4 cut(s) 130, 202, 544, 589
AjiI CACGTC 1 cut(s) 505
AjnI CCWGG 5 cut(s) 14, 66, 72, 104, 464
AleI CACNNNNGTG 1 cut(s) 719
AluBI AGCT 3 cut(s) 340, 352, 784
AluI AGCT 3 cut(s) 340, 352, 784
Alw26I GTCTC 3 cut(s) 301, 648, 725
AlwI GGATC 1 cut(s) 26
AlwNI CAGNNNCTG 2 cut(s) 67, 796
Ama87I CYCGRG 2 cut(s) 335, 728
AoxI GGCC 7 cut(s) 75, 286, 462, 579, 706, 739, 774
ApeKI GCWGC 1 cut(s) 109
Asp700I GAANNNNTTC 1 cut(s) 434
AspLEI GCGC 8 cut(s) 114, 170, 278, 368, 484, 552, 761, 763
AspS9I GGNCC 6 cut(s) 70, 76, 534, 579, 739, 775
AsuC2I CCSGG 4 cut(s) 41, 49, 623, 765
AsuHPI GGTGA 1 cut(s) 235
AvaI CYCGRG 2 cut(s) 335, 728
AvaII GGWCC 2 cut(s) 70, 534
AxyI CCTNAGG 1 cut(s) 599
BaeGI GKGCMC 1 cut(s) 630
BanI GGYRCC 1 cut(s) 625
BbsI GAAGAC 1 cut(s) 577
BbvI GCAGC 1 cut(s) 121
BccI CCATC 4 cut(s) 254, 439, 705, 725
BceAI ACGGC 5 cut(s) 242, 476, 490, 500, 566
BciT130I CCWGG 5 cut(s) 16, 68, 74, 106, 466
BcnI CCSGG 4 cut(s) 41, 49, 623, 765
BcoDI GTCTC 3 cut(s) 301, 648, 725
BfaI CTAG 1 cut(s) 488
BfoI RGCGCY 1 cut(s) 369
BglI GCCNNNNNGGC 1 cut(s) 677
BisI GCNGC 4 cut(s) 110, 331, 513, 749
BlsI GCNGC 4 cut(s) 111, 332, 514, 750
Bme1390I CCNGG 9 cut(s) 16, 41, 49, 68, 74, 106, 466, 623, 765
Bme18I GGWCC 2 cut(s) 70, 534
BmeT110I CYCGRG 2 cut(s) 335, 728
BmgBI CACGTC 1 cut(s) 505
BmgT120I GGNCC 6 cut(s) 70, 76, 534, 579, 739, 775
BmiI GGNNCC 3 cut(s) 499, 536, 627
BmrFI CCNGG 9 cut(s) 16, 41, 49, 68, 74, 106, 466, 623, 765
BmsI GCATC 2 cut(s) 153, 321
BpiI GAAGAC 1 cut(s) 577
BplI GAGNNNNNCTC 2 cut(s) 329, 361
BpuMI CCSGG 4 cut(s) 41, 49, 623, 765
BsaBI GATNNNNATC 1 cut(s) 311
BsaHI GRCGYC 1 cut(s) 255
BsaI GGTCTC 1 cut(s) 648
BsaJI CCNNGG 6 cut(s) 79, 361, 374, 400, 465, 675
BsaXI ACNNNNNCTCC 4 cut(s) 281, 311, 489, 519
Bsc4I CCNNNNNNNGG 1 cut(s) 73
Bse1I ACTGG 1 cut(s) 790
Bse21I CCTNAGG 1 cut(s) 599
Bse8I GATNNNNATC 1 cut(s) 311
BseBI CCWGG 5 cut(s) 16, 68, 74, 106, 466
BseDI CCNNGG 6 cut(s) 79, 361, 374, 400, 465, 675
BseGI GGATG 3 cut(s) 246, 312, 354
BseJI GATNNNNATC 1 cut(s) 311
BseLI CCNNNNNNNGG 1 cut(s) 73
BseMII CTCAG 1 cut(s) 590
BseNI ACTGG 1 cut(s) 790
BsePI GCGCGC 1 cut(s) 759
BseRI GAGGAG 2 cut(s) 350, 434
BseSI GKGCMC 1 cut(s) 630
BseXI GCAGC 1 cut(s) 121
BseYI CCCAGC 1 cut(s) 5
Bsh1236I CGCG 3 cut(s) 482, 577, 761
BshFI GGCC 7 cut(s) 77, 288, 464, 581, 708, 741, 776
BshNI GGYRCC 1 cut(s) 625
BsiHKCI CYCGRG 2 cut(s) 335, 728
BsiSI CCGG 7 cut(s) 40, 48, 171, 532, 622, 709, 764
BslFI GGGAC 2 cut(s) 407, 650
BslI CCNNNNNNNGG 1 cut(s) 73
BsmAI GTCTC 3 cut(s) 301, 648, 725
BsmBI CGTCTC 1 cut(s) 725
BsmFI GGGAC 2 cut(s) 407, 650
BsmI GAATGC 1 cut(s) 114
BsnI GGCC 7 cut(s) 77, 288, 464, 581, 708, 741, 776
Bso31I GGTCTC 1 cut(s) 648
BsoBI CYCGRG 2 cut(s) 335, 728
Bsp1286I GDGCHC 1 cut(s) 630
Bsp143I GATC 2 cut(s) 18, 306
Bsp19I CCATGG 1 cut(s) 79
BspANI GGCC 7 cut(s) 77, 288, 464, 581, 708, 741, 776
BspCNI CTCAG 1 cut(s) 591
BspFNI CGCG 3 cut(s) 482, 577, 761
BspLI GGNNCC 3 cut(s) 499, 536, 627
BspPI GGATC 1 cut(s) 26
BspQI GCTCTTC 1 cut(s) 572
BspT107I GGYRCC 1 cut(s) 625
BspTNI GGTCTC 1 cut(s) 648
BsrI ACTGG 1 cut(s) 790
BssECI CCNNGG 6 cut(s) 79, 361, 374, 400, 465, 675
BssHII GCGCGC 1 cut(s) 759
BssMI GATC 2 cut(s) 18, 306
BssNAI GTATAC 1 cut(s) 154
BssNI GRCGYC 1 cut(s) 255
BssT1I CCWWGG 2 cut(s) 79, 374
Bst1107I GTATAC 1 cut(s) 154
Bst2UI CCWGG 5 cut(s) 16, 68, 74, 106, 466
Bst6I CTCTTC 1 cut(s) 572
BstACI GRCGYC 1 cut(s) 255
BstC8I GCNNGC 4 cut(s) 59, 510, 579, 761
BstDEI CTNAG 2 cut(s) 22, 599
BstDSI CCRYGG 3 cut(s) 79, 400, 675
BstEII GGTNACC 1 cut(s) 43
BstF5I GGATG 3 cut(s) 246, 312, 354
BstFNI CGCG 3 cut(s) 482, 577, 761
BstH2I RGCGCY 1 cut(s) 369
BstHHI GCGC 8 cut(s) 114, 170, 278, 368, 484, 552, 761, 763
BstKTI GATC 2 cut(s) 21, 309
BstMAI GTCTC 3 cut(s) 301, 648, 725
BstMBI GATC 2 cut(s) 18, 306
BstMWI GCNNNNNNNGC 4 cut(s) 449, 488, 497, 677
BstNI CCWGG 5 cut(s) 16, 68, 74, 106, 466
BstNSI RCATGY 1 cut(s) 550
BstPI GGTNACC 1 cut(s) 43
BstSCI CCNGG 9 cut(s) 14, 39, 47, 66, 72, 104, 464, 621, 763
BstSLI GKGCMC 1 cut(s) 630
BstUI CGCG 3 cut(s) 482, 577, 761
BstV1I GCAGC 1 cut(s) 121
BstV2I GAAGAC 1 cut(s) 577
BstX2I RGATCY 1 cut(s) 18
BstXI CCANNNNNNTGG 1 cut(s) 704
BstYI RGATCY 1 cut(s) 18
BstZ17I GTATAC 1 cut(s) 154
Bsu36I CCTNAGG 1 cut(s) 599
BsuRI GGCC 7 cut(s) 77, 288, 464, 581, 708, 741, 776
BtgI CCRYGG 3 cut(s) 79, 400, 675
BtgZI GCGATG 1 cut(s) 458
BtrI CACGTC 1 cut(s) 505
BtsCI GGATG 3 cut(s) 246, 312, 354
BtsIMutI CAGTG 2 cut(s) 90, 797
Cac8I GCNNGC 4 cut(s) 59, 510, 579, 761
CaiI CAGNNNCTG 2 cut(s) 67, 796
CfoI GCGC 8 cut(s) 114, 170, 278, 368, 484, 552, 761, 763
Cfr13I GGNCC 6 cut(s) 70, 76, 534, 579, 739, 775
CseI GACGC 2 cut(s) 263, 733
CsiI ACCWGGT 1 cut(s) 66
Csp6I GTAC 1 cut(s) 64
CviAII CATG 3 cut(s) 80, 304, 547
CviQI GTAC 1 cut(s) 64
DdeI CTNAG 2 cut(s) 22, 599
DpnI GATC 2 cut(s) 20, 308
DpnII GATC 2 cut(s) 18, 306
DrdI GACNNNNNNGTC 2 cut(s) 227, 662
DseDI GACNNNNNNGTC 2 cut(s) 227, 662
EaeI YGGCCR 2 cut(s) 286, 706
Eam1104I CTCTTC 1 cut(s) 572
EarI CTCTTC 1 cut(s) 572
EciI GGCGGA 3 cut(s) 91, 289, 776
Eco130I CCWWGG 2 cut(s) 79, 374
Eco31I GGTCTC 1 cut(s) 648
Eco32I GATATC 1 cut(s) 559
Eco47I GGWCC 2 cut(s) 70, 534
Eco81I CCTNAGG 1 cut(s) 599
Eco88I CYCGRG 2 cut(s) 335, 728
Eco91I GGTNACC 1 cut(s) 43
EcoO65I GGTNACC 1 cut(s) 43
EcoRII CCWGG 5 cut(s) 14, 66, 72, 104, 464
EcoRV GATATC 1 cut(s) 559
EcoT14I CCWWGG 2 cut(s) 79, 374
ErhI CCWWGG 2 cut(s) 79, 374
Esp3I CGTCTC 1 cut(s) 725
FaeI CATG 3 cut(s) 83, 307, 550
FaiI YATR 5 cut(s) 81, 154, 305, 548, 638
FaqI GGGAC 2 cut(s) 407, 650
FatI CATG 3 cut(s) 79, 303, 546
FauI CCCGC 1 cut(s) 570
FblI GTMKAC 2 cut(s) 153, 231
Fnu4HI GCNGC 4 cut(s) 110, 331, 513, 749
FokI GGATG 3 cut(s) 233, 299, 341
Fsp4HI GCNGC 4 cut(s) 110, 331, 513, 749
FspBI CTAG 1 cut(s) 488
GlaI GCGC 8 cut(s) 113, 169, 277, 367, 483, 551, 760, 762
GluI GCNGC 4 cut(s) 110, 331, 513, 749
GsaI CCCAGC 1 cut(s) 9
HaeII RGCGCY 1 cut(s) 369
HaeIII GGCC 7 cut(s) 77, 288, 464, 581, 708, 741, 776
HapII CCGG 7 cut(s) 40, 48, 171, 532, 622, 709, 764
HgaI GACGC 2 cut(s) 263, 733
HhaI GCGC 8 cut(s) 114, 170, 278, 368, 484, 552, 761, 763
Hin1I GRCGYC 1 cut(s) 255
Hin1II CATG 3 cut(s) 83, 307, 550
Hin6I GCGC 8 cut(s) 112, 168, 276, 366, 482, 550, 759, 761
HinP1I GCGC 8 cut(s) 112, 168, 276, 366, 482, 550, 759, 761
HincII GTYRAC 3 cut(s) 181, 232, 472
HindII GTYRAC 3 cut(s) 181, 232, 472
HpaII CCGG 7 cut(s) 40, 48, 171, 532, 622, 709, 764
HphI GGTGA 1 cut(s) 235
Hpy166II GTNNAC 4 cut(s) 154, 181, 232, 472
Hpy188I TCNGA 3 cut(s) 33, 384, 521
Hpy188III TCNNGA 3 cut(s) 643, 721, 730
Hpy8I GTNNAC 4 cut(s) 154, 181, 232, 472
Hpy99I CGWCG 7 cut(s) 233, 236, 257, 263, 287, 506, 808
HpyAV CCTTC 1 cut(s) 235
HpyCH4IV ACGT 2 cut(s) 282, 504
HpyF10VI GCNNNNNNNGC 4 cut(s) 449, 488, 497, 677
HpyF3I CTNAG 2 cut(s) 22, 599
HpySE526I ACGT 2 cut(s) 282, 504
Hsp92I GRCGYC 1 cut(s) 255
Hsp92II CATG 3 cut(s) 83, 307, 550
HspAI GCGC 8 cut(s) 112, 168, 276, 366, 482, 550, 759, 761
Kzo9I GATC 2 cut(s) 18, 306
LguI GCTCTTC 1 cut(s) 572
LmnI GCTCC 2 cut(s) 497, 789
Lsp1109I GCAGC 1 cut(s) 121
LweI GCATC 2 cut(s) 153, 321
MabI ACCWGGT 1 cut(s) 66
MaeI CTAG 1 cut(s) 488
MaeII ACGT 2 cut(s) 282, 504
MaeIII GTNAC 2 cut(s) 43, 721
MalI GATC 2 cut(s) 20, 308
MboI GATC 2 cut(s) 18, 306
MboII GAAGA 2 cut(s) 559, 577
MflI RGATCY 1 cut(s) 18
MhlI GDGCHC 1 cut(s) 630
MluCI AATT 2 cut(s) 431, 454
MmeI TCCRAC 1 cut(s) 475
MroXI GAANNNNTTC 1 cut(s) 434
MslI CAYNNNNRTG 2 cut(s) 702, 719
MspI CCGG 7 cut(s) 40, 48, 171, 532, 622, 709, 764
MspR9I CCNGG 9 cut(s) 16, 41, 49, 68, 74, 106, 466, 623, 765
Mva1269I GAATGC 1 cut(s) 114
MvaI CCWGG 5 cut(s) 16, 68, 74, 106, 466
MvnI CGCG 3 cut(s) 482, 577, 761
MwoI GCNNNNNNNGC 4 cut(s) 449, 488, 497, 677
NciI CCSGG 4 cut(s) 41, 49, 623, 765
NcoI CCATGG 1 cut(s) 79
NdeII GATC 2 cut(s) 18, 306
NlaIII CATG 3 cut(s) 83, 307, 550
NlaIV GGNNCC 3 cut(s) 499, 536, 627
NmeAIII GCCGAG 3 cut(s) 342, 419, 440
NmuCI GTSAC 1 cut(s) 721
NspI RCATGY 1 cut(s) 550
OliI CACNNNNGTG 1 cut(s) 719
PaeR7I CTCGAG 1 cut(s) 728
PauI GCGCGC 1 cut(s) 759
PciSI GCTCTTC 1 cut(s) 572
PcsI WCGNNNNNNNCGW 3 cut(s) 225, 408, 726
PctI GAATGC 1 cut(s) 114
PdmI GAANNNNTTC 1 cut(s) 434
PflFI GACNNNGTC 2 cut(s) 161, 257
PkrI GCNGC 4 cut(s) 111, 332, 514, 750
Psp6I CCWGG 5 cut(s) 14, 66, 72, 104, 464
PspEI GGTNACC 1 cut(s) 43
PspFI CCCAGC 1 cut(s) 5
PspGI CCWGG 5 cut(s) 14, 66, 72, 104, 464
PspN4I GGNNCC 3 cut(s) 499, 536, 627
PspPI GGNCC 6 cut(s) 70, 76, 534, 579, 739, 775
PstNI CAGNNNCTG 2 cut(s) 67, 796
PsuI RGATCY 1 cut(s) 18
PsyI GACNNNGTC 2 cut(s) 161, 257
PteI GCGCGC 1 cut(s) 759
RsaI GTAC 1 cut(s) 65
RsaNI GTAC 1 cut(s) 64
RseI CAYNNNNRTG 2 cut(s) 702, 719
SalI GTCGAC 1 cut(s) 230
SapI GCTCTTC 1 cut(s) 572
SatI GCNGC 4 cut(s) 110, 331, 513, 749
Sau3AI GATC 2 cut(s) 18, 306
Sau96I GGNCC 6 cut(s) 70, 76, 534, 579, 739, 775
ScrFI CCNGG 9 cut(s) 16, 41, 49, 68, 74, 106, 466, 623, 765
SduI GDGCHC 1 cut(s) 630
SexAI ACCWGGT 1 cut(s) 66
SfaNI GCATC 2 cut(s) 153, 321
Sfr274I CTCGAG 1 cut(s) 728
SgrDI CGTCGACG 1 cut(s) 230
SinI GGWCC 2 cut(s) 70, 534
SlaI CTCGAG 1 cut(s) 728
SmiMI CAYNNNNRTG 2 cut(s) 702, 719
SmlI CTYRAG 1 cut(s) 728
SmoI CTYRAG 1 cut(s) 728
Sse9I AATT 2 cut(s) 431, 454
SspMI CTAG 1 cut(s) 488
StyD4I CCNGG 9 cut(s) 14, 39, 47, 66, 72, 104, 464, 621, 763
StyI CCWWGG 2 cut(s) 79, 374
TaiI ACGT 2 cut(s) 285, 507
TaqI TCGA 6 cut(s) 195, 219, 231, 252, 411, 729
TasI AATT 2 cut(s) 431, 454
TauI GCSGC 3 cut(s) 333, 515, 751
TscAI CASTG 2 cut(s) 97, 797
TseFI GTSAC 1 cut(s) 721
TseI GCWGC 1 cut(s) 109
Tsp45I GTSAC 1 cut(s) 721
TspDTI ATGAA 1 cut(s) 625
TspGWI ACGGA 3 cut(s) 417, 664, 749
TspRI CASTG 2 cut(s) 97, 797
Tth111I GACNNNGTC 2 cut(s) 161, 257
VpaK11BI GGWCC 2 cut(s) 70, 534
XceI RCATGY 1 cut(s) 550
XhoI CTCGAG 1 cut(s) 728
XmiI GTMKAC 2 cut(s) 153, 231
XmnI GAANNNNTTC 1 cut(s) 434
XspI CTAG 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.