Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0012366

Physical Location & Seq

Genomic Coordinates Reverse (-)

36508729 .. 36510371

Gene Structure 1643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G423400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 807 bp

ATGGTCAGCACCAGCATAATCGACGCCCTCAACGTCCGCGTGGTCGGCTCCGGCGATAAGTTCCTCGTCCTCGCCCACGGCTTCGGCACCGACCAGTCCGCCTGGCAGCGCATTCTCCCTTACCTGACGCAGTCCTACCGCGTCATCGTATACGACCTCGTTTGCGCCGGCAGCGTCAACCCGGACTACTTTGACTTCCGCCGTTACACCACCCTCGACGCCTACGTCGACGACCTCCTCGCCATTCTCGACGCCCTCTCCGTCACCCGTTGCGCCTACGTTGGCCACTCCGTCTCCGCCATGATCGGAATTCTCGCCTCCATCCGCCGACCCAACCTCTTCTCCAAGCTCGTCCTCATCGGCGCTTCTCCCAGATTTTTGAATGATAGAGATTACCATGGCGGATTTGAGCAAGAGGAGATTGAGAAGGTGTTTTCGGCAATGGAGGCGAACTACTCGGCGTGGGTCCAAGGCTTTGCGCCGTTAGCCGTCGGAGCGGACGTGCCGGCGGCGGTCCGAGAGTTCAGCCGGACCCTTTTCAACATGCGACCCGATATCTCGCTTTTCGTATCTCGGGCCGTCTTCAACAGCGATTTGAGGGGGGTTCTGGGCCTGGTCAGAGTGCCCTGCTGCATAATCCAGACGGCGAAGGACGTGTCCGTGCCGGCTTCGGTGGCGGCTTACCTGAGGGACCACCTGGGCGGTCGGAACACCGTCGTGATGCTGGAGACGGAGGGGCACTTGCCCCATCTGAGCGCGCCGAGCCTGCTGATAAGGAAGCTCCGGCATGCCCTTGCGTCGTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009987 GO:0010016 GO:0010033 GO:0010223 GO:0010346 GO:0010817 GO:0014070 GO:0016106 GO:0016114 GO:0018130 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0046483 GO:0048367 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:1901334 GO:1901336 GO:1901360 GO:1901362 GO:1901576 GO:1901600 GO:1901601 GO:1901700 GO:1901701 GO:1902347 GO:1902348 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

269

Amino Acids

29.42

Weight (kDa)

7.05

Isoelectric Point (pI)

32.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03990
fragaria_vesca	FvH4_2g33160
malus_domestica	MD08G1084500.v1.1 MD08G1084800.v1.1 MD15G1070700.v1.1
prunus_persica	Prupe.1G423400_v2.0.a1
pyrus_communis	pycom08g07000 pycom15g06640
rosa_chinensis	RchiOBHm_Chr6g0309501
rosa_laevigata	RLG00000010560
rosa_multiflora	Rmu_co8437415.1_g000001 Rmu_sc0007283.1_g000008
rosa_roxburghii	Rroxscaffold_7G00159350
rosa_rugosa	Rorug06G0372500
rosa_samantha	Rh6AG485800 Rh6BG495200 Rh6CG500200 Rh6DG486100
rosa_wichuraiana	Rw6G042310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	224
AccB1I	GGYRCC	1 cut(s)	86
AccBSI	CCGCTC	1 cut(s)	497
AccI	GTMKAC	2 cut(s)	150, 228
AccII	CGCG	3 cut(s)	39, 141, 758
AcoI	YGGCCR	1 cut(s)	283
AcsI	RAATTY	1 cut(s)	309
AcyI	GRCGYC	3 cut(s)	24, 219, 252
AflIII	ACRYGT	1 cut(s)	654
AgsI	TTSAA	3 cut(s)	382, 541, 586
AjiI	CACGTC	2 cut(s)	502, 655
AjnI	CCWGG	3 cut(s)	101, 612, 696
AleI	CACNNNNGTG	1 cut(s)	716
AluBI	AGCT	2 cut(s)	349, 781
AluI	AGCT	2 cut(s)	349, 781
Alw26I	GTCTC	2 cut(s)	298, 722
Ama87I	CYCGRG	1 cut(s)	573
AoxI	GGCC	3 cut(s)	283, 576, 610
ApeKI	GCWGC	3 cut(s)	106, 171, 630
ApoI	RAATTY	1 cut(s)	309
ArsI	GACNNNNNNTTYG	2 cut(s)	641, 673
AspLEI	GCGC	7 cut(s)	111, 167, 275, 365, 481, 758, 760
AspS9I	GGNCC	6 cut(s)	466, 514, 531, 576, 610, 691
AsuC2I	CCSGG	1 cut(s)	182
AsuHPI	GGTGA	1 cut(s)	256
AvaI	CYCGRG	1 cut(s)	573
AvaII	GGWCC	4 cut(s)	466, 514, 531, 691
AxyI	CCTNAGG	1 cut(s)	686
BaeGI	GKGCMC	2 cut(s)	627, 741
BalI	TGGCCA	1 cut(s)	285
BanI	GGYRCC	1 cut(s)	86
BbsI	GAAGAC	1 cut(s)	574
BbvI	GCAGC	3 cut(s)	118, 183, 617
BccI	CCATC	2 cut(s)	329, 756
BceAI	ACGGC	6 cut(s)	94, 186, 466, 473, 563, 660
BciT130I	CCWGG	3 cut(s)	103, 614, 698
BcnI	CCSGG	1 cut(s)	182
BcoDI	GTCTC	2 cut(s)	298, 722
BfoI	RGCGCY	1 cut(s)	366
BisI	GCNGC	5 cut(s)	107, 172, 510, 631, 678
BlsI	GCNGC	5 cut(s)	108, 173, 511, 632, 679
Bme1390I	CCNGG	4 cut(s)	103, 182, 614, 698
Bme18I	GGWCC	4 cut(s)	466, 514, 531, 691
BmeT110I	CYCGRG	1 cut(s)	573
BmgBI	CACGTC	2 cut(s)	502, 655
BmgT120I	GGNCC	6 cut(s)	466, 514, 531, 576, 610, 691
BmiI	GGNNCC	5 cut(s)	49, 88, 467, 533, 692
BmrFI	CCNGG	4 cut(s)	103, 182, 614, 698
BmsI	GCATC	1 cut(s)	711
BpiI	GAAGAC	1 cut(s)	574
BpmI	CTGGAG	1 cut(s)	746
BpuMI	CCSGG	1 cut(s)	182
BsaHI	GRCGYC	3 cut(s)	24, 219, 252
BsaJI	CCNNGG	4 cut(s)	76, 397, 469, 697
BsaXI	ACNNNNNCTCC	8 cut(s)	242, 272, 278, 308, 326, 356, 486, 516
Bse118I	RCCGGY	3 cut(s)	167, 505, 664
Bse1I	ACTGG	1 cut(s)	94
Bse21I	CCTNAGG	1 cut(s)	686
Bse3DI	GCAATG	1 cut(s)	447
BseBI	CCWGG	3 cut(s)	103, 614, 698
BseDI	CCNNGG	4 cut(s)	76, 397, 469, 697
BseGI	GGATG	1 cut(s)	321
BseMI	GCAATG	1 cut(s)	447
BseMII	CTCAG	2 cut(s)	677, 743
BseNI	ACTGG	1 cut(s)	94
BsePI	GCGCGC	1 cut(s)	756
BseRI	GAGGAG	2 cut(s)	227, 431
BseSI	GKGCMC	2 cut(s)	627, 741
BseXI	GCAGC	3 cut(s)	118, 183, 617
Bsh1236I	CGCG	3 cut(s)	39, 141, 758
Bsh1285I	CGRYCG	1 cut(s)	706
BshFI	GGCC	3 cut(s)	285, 578, 612
BshNI	GGYRCC	1 cut(s)	86
BsiEI	CGRYCG	1 cut(s)	706
BsiHKCI	CYCGRG	1 cut(s)	573
BsiSI	CCGG	7 cut(s)	51, 168, 182, 506, 529, 665, 784
BslFI	GGGAC	1 cut(s)	704
BsmAI	GTCTC	2 cut(s)	298, 722
BsmBI	CGTCTC	2 cut(s)	298, 722
BsmFI	GGGAC	1 cut(s)	704
BsmI	GAATGC	1 cut(s)	111
BsnI	GGCC	3 cut(s)	285, 578, 612
BsoBI	CYCGRG	1 cut(s)	573
Bsp1286I	GDGCHC	2 cut(s)	627, 741
Bsp143I	GATC	1 cut(s)	303
Bsp19I	CCATGG	1 cut(s)	397
BspANI	GGCC	3 cut(s)	285, 578, 612
BspCNI	CTCAG	2 cut(s)	678, 744
BspFNI	CGCG	3 cut(s)	39, 141, 758
BspLI	GGNNCC	5 cut(s)	49, 88, 467, 533, 692
BspT107I	GGYRCC	1 cut(s)	86
BsrBI	CCGCTC	1 cut(s)	497
BsrDI	GCAATG	1 cut(s)	447
BsrFI	RCCGGY	3 cut(s)	167, 505, 664
BsrI	ACTGG	1 cut(s)	94
BssAI	RCCGGY	3 cut(s)	167, 505, 664
BssECI	CCNNGG	4 cut(s)	76, 397, 469, 697
BssHII	GCGCGC	1 cut(s)	756
BssMI	GATC	1 cut(s)	303
BssNAI	GTATAC	1 cut(s)	151
BssNI	GRCGYC	3 cut(s)	24, 219, 252
BssT1I	CCWWGG	2 cut(s)	397, 469
Bst1107I	GTATAC	1 cut(s)	151
Bst2UI	CCWGG	3 cut(s)	103, 614, 698
Bst4CI	ACNGT	1 cut(s)	715
Bst6I	CTCTTC	1 cut(s)	344
BstACI	GRCGYC	3 cut(s)	24, 219, 252
BstC8I	GCNNGC	6 cut(s)	169, 507, 666, 758, 767, 789
BstDEI	CTNAG	2 cut(s)	686, 752
BstDSI	CCRYGG	2 cut(s)	76, 397
BstF5I	GGATG	1 cut(s)	321
BstFNI	CGCG	3 cut(s)	39, 141, 758
BstH2I	RGCGCY	1 cut(s)	366
BstHHI	GCGC	7 cut(s)	111, 167, 275, 365, 481, 758, 760
BstKTI	GATC	1 cut(s)	306
BstMAI	GTCTC	2 cut(s)	298, 722
BstMBI	GATC	1 cut(s)	303
BstMCI	CGRYCG	1 cut(s)	706
BstMWI	GCNNNNNNNGC	8 cut(s)	45, 171, 446, 485, 494, 674, 762, 766
BstNI	CCWGG	3 cut(s)	103, 614, 698
BstNSI	RCATGY	2 cut(s)	547, 791
BstSCI	CCNGG	4 cut(s)	101, 180, 612, 696
BstSLI	GKGCMC	2 cut(s)	627, 741
BstUI	CGCG	3 cut(s)	39, 141, 758
BstV1I	GCAGC	3 cut(s)	118, 183, 617
BstV2I	GAAGAC	1 cut(s)	574
BstZ17I	GTATAC	1 cut(s)	151
Bsu36I	CCTNAGG	1 cut(s)	686
BsuRI	GGCC	3 cut(s)	285, 578, 612
BtgI	CCRYGG	2 cut(s)	76, 397
BtrI	CACGTC	2 cut(s)	502, 655
BtsCI	GGATG	1 cut(s)	321
Cac8I	GCNNGC	6 cut(s)	169, 507, 666, 758, 767, 789
CfoI	GCGC	7 cut(s)	111, 167, 275, 365, 481, 758, 760
Cfr10I	RCCGGY	3 cut(s)	167, 505, 664
Cfr13I	GGNCC	6 cut(s)	466, 514, 531, 576, 610, 691
CpoI	CGGWCCG	1 cut(s)	514
CseI	GACGC	7 cut(s)	32, 130, 136, 163, 227, 260, 786
CspI	CGGWCCG	1 cut(s)	514
CviAII	CATG	4 cut(s)	301, 398, 544, 788
DdeI	CTNAG	2 cut(s)	686, 752
DpnI	GATC	1 cut(s)	305
DpnII	GATC	1 cut(s)	303
DrdI	GACNNNNNNGTC	1 cut(s)	224
DseDI	GACNNNNNNGTC	1 cut(s)	224
EaeI	YGGCCR	1 cut(s)	283
Eam1104I	CTCTTC	1 cut(s)	344
EarI	CTCTTC	1 cut(s)	344
EciI	GGCGGA	5 cut(s)	88, 188, 286, 314, 417
Eco130I	CCWWGG	2 cut(s)	397, 469
Eco32I	GATATC	1 cut(s)	556
Eco47I	GGWCC	4 cut(s)	466, 514, 531, 691
Eco81I	CCTNAGG	1 cut(s)	686
Eco88I	CYCGRG	1 cut(s)	573
EcoRI	GAATTC	1 cut(s)	309
EcoRII	CCWGG	3 cut(s)	101, 612, 696
EcoRV	GATATC	1 cut(s)	556
EcoT14I	CCWWGG	2 cut(s)	397, 469
ErhI	CCWWGG	2 cut(s)	397, 469
Esp3I	CGTCTC	2 cut(s)	298, 722
FaeI	CATG	4 cut(s)	304, 401, 547, 791
FaiI	YATR	7 cut(s)	17, 151, 302, 399, 545, 635, 789
FaqI	GGGAC	1 cut(s)	704
FatI	CATG	4 cut(s)	300, 397, 543, 787
FblI	GTMKAC	2 cut(s)	150, 228
Fnu4HI	GCNGC	5 cut(s)	107, 172, 510, 631, 678
FokI	GGATG	1 cut(s)	308
Fsp4HI	GCNGC	5 cut(s)	107, 172, 510, 631, 678
GlaI	GCGC	7 cut(s)	110, 166, 274, 364, 480, 757, 759
GluI	GCNGC	5 cut(s)	107, 172, 510, 631, 678
GsuI	CTGGAG	1 cut(s)	746
HaeII	RGCGCY	1 cut(s)	366
HaeIII	GGCC	3 cut(s)	285, 578, 612
HapII	CCGG	7 cut(s)	51, 168, 182, 506, 529, 665, 784
HgaI	GACGC	7 cut(s)	32, 130, 136, 163, 227, 260, 786
HhaI	GCGC	7 cut(s)	111, 167, 275, 365, 481, 758, 760
Hin1I	GRCGYC	3 cut(s)	24, 219, 252
Hin1II	CATG	4 cut(s)	304, 401, 547, 791
Hin6I	GCGC	7 cut(s)	109, 165, 273, 363, 479, 756, 758
HinP1I	GCGC	7 cut(s)	109, 165, 273, 363, 479, 756, 758
HincII	GTYRAC	2 cut(s)	178, 229
HindII	GTYRAC	2 cut(s)	178, 229
HpaII	CCGG	7 cut(s)	51, 168, 182, 506, 529, 665, 784
HphI	GGTGA	1 cut(s)	256
Hpy166II	GTNNAC	3 cut(s)	151, 178, 229
Hpy188I	TCNGA	6 cut(s)	308, 494, 518, 620, 708, 753
Hpy188III	TCNNGA	3 cut(s)	248, 640, 718
Hpy8I	GTNNAC	3 cut(s)	151, 178, 229
Hpy99I	CGWCG	9 cut(s)	26, 221, 230, 233, 254, 494, 719, 802, 805
HpyAV	CCTTC	2 cut(s)	421, 643
HpyCH4III	ACNGT	1 cut(s)	715
HpyCH4IV	ACGT	5 cut(s)	33, 225, 279, 501, 654
HpyCH4V	TGCA	1 cut(s)	633
HpyF10VI	GCNNNNNNNGC	8 cut(s)	45, 171, 446, 485, 494, 674, 762, 766
HpyF3I	CTNAG	2 cut(s)	686, 752
HpySE526I	ACGT	5 cut(s)	33, 225, 279, 501, 654
Hsp92I	GRCGYC	3 cut(s)	24, 219, 252
Hsp92II	CATG	4 cut(s)	304, 401, 547, 791
HspAI	GCGC	7 cut(s)	109, 165, 273, 363, 479, 756, 758
KroI	GCCGGC	3 cut(s)	167, 505, 664
KroNI	GCCGGC	3 cut(s)	169, 507, 666
Kzo9I	GATC	1 cut(s)	303
LmnI	GCTCC	3 cut(s)	53, 494, 786
Lsp1109I	GCAGC	3 cut(s)	118, 183, 617
LweI	GCATC	1 cut(s)	711
MaeII	ACGT	5 cut(s)	33, 225, 279, 501, 654
MaeIII	GTNAC	2 cut(s)	203, 262
MalI	GATC	1 cut(s)	305
MbiI	CCGCTC	1 cut(s)	497
MboI	GATC	1 cut(s)	303
MboII	GAAGA	2 cut(s)	331, 574
MhlI	GDGCHC	2 cut(s)	627, 741
MlsI	TGGCCA	1 cut(s)	285
MluCI	AATT	1 cut(s)	309
MluNI	TGGCCA	1 cut(s)	285
MmeI	TCCRAC	2 cut(s)	472, 686
Mox20I	TGGCCA	1 cut(s)	285
MroNI	GCCGGC	3 cut(s)	167, 505, 664
MscI	TGGCCA	1 cut(s)	285
MslI	CAYNNNNRTG	1 cut(s)	716
Msp20I	TGGCCA	1 cut(s)	285
MspI	CCGG	7 cut(s)	51, 168, 182, 506, 529, 665, 784
MspR9I	CCNGG	4 cut(s)	103, 182, 614, 698
Mva1269I	GAATGC	1 cut(s)	111
MvaI	CCWGG	3 cut(s)	103, 614, 698
MvnI	CGCG	3 cut(s)	39, 141, 758
MwoI	GCNNNNNNNGC	8 cut(s)	45, 171, 446, 485, 494, 674, 762, 766
NaeI	GCCGGC	3 cut(s)	169, 507, 666
NciI	CCSGG	1 cut(s)	182
NcoI	CCATGG	1 cut(s)	397
NdeII	GATC	1 cut(s)	303
NgoMIV	GCCGGC	3 cut(s)	167, 505, 664
NlaIII	CATG	4 cut(s)	304, 401, 547, 791
NlaIV	GGNNCC	5 cut(s)	49, 88, 467, 533, 692
NmeAIII	GCCGAG	2 cut(s)	437, 786
NmuCI	GTSAC	1 cut(s)	262
NspI	RCATGY	2 cut(s)	547, 791
OliI	CACNNNNGTG	1 cut(s)	716
PaeI	GCATGC	1 cut(s)	791
PauI	GCGCGC	1 cut(s)	756
PcsI	WCGNNNNNNNCGW	7 cut(s)	30, 51, 222, 225, 246, 258, 498
PctI	GAATGC	1 cut(s)	111
PdiI	GCCGGC	3 cut(s)	169, 507, 666
PflFI	GACNNNGTC	1 cut(s)	130
PkrI	GCNGC	5 cut(s)	108, 173, 511, 632, 679
Psp6I	CCWGG	3 cut(s)	101, 612, 696
PspGI	CCWGG	3 cut(s)	101, 612, 696
PspN4I	GGNNCC	5 cut(s)	49, 88, 467, 533, 692
PspPI	GGNCC	6 cut(s)	466, 514, 531, 576, 610, 691
PsyI	GACNNNGTC	1 cut(s)	130
PteI	GCGCGC	1 cut(s)	756
RseI	CAYNNNNRTG	1 cut(s)	716
Rsr2I	CGGWCCG	1 cut(s)	514
RsrII	CGGWCCG	1 cut(s)	514
SalI	GTCGAC	1 cut(s)	227
SatI	GCNGC	5 cut(s)	107, 172, 510, 631, 678
Sau3AI	GATC	1 cut(s)	303
Sau96I	GGNCC	6 cut(s)	466, 514, 531, 576, 610, 691
ScrFI	CCNGG	4 cut(s)	103, 182, 614, 698
SduI	GDGCHC	2 cut(s)	627, 741
SfaNI	GCATC	1 cut(s)	711
SgrDI	CGTCGACG	1 cut(s)	227
SinI	GGWCC	4 cut(s)	466, 514, 531, 691
SmiMI	CAYNNNNRTG	1 cut(s)	716
SphI	GCATGC	1 cut(s)	791
Sse9I	AATT	1 cut(s)	309
StyD4I	CCNGG	4 cut(s)	101, 180, 612, 696
StyI	CCWWGG	2 cut(s)	397, 469
TaaI	ACNGT	1 cut(s)	715
TaiI	ACGT	5 cut(s)	36, 228, 282, 504, 657
TaqI	TCGA	4 cut(s)	21, 216, 228, 249
TasI	AATT	1 cut(s)	309
TauI	GCSGC	2 cut(s)	512, 680
TseFI	GTSAC	1 cut(s)	262
TseI	GCWGC	3 cut(s)	106, 171, 630
Tsp45I	GTSAC	1 cut(s)	262
TspGWI	ACGGA	4 cut(s)	250, 280, 649, 746
Tth111I	GACNNNGTC	1 cut(s)	130
VpaK11BI	GGWCC	4 cut(s)	466, 514, 531, 691
XapI	RAATTY	1 cut(s)	309
XceI	RCATGY	2 cut(s)	547, 791
XmiI	GTMKAC	2 cut(s)	150, 228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.