FvH4_2g33220

SPOC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0008266
Physical Location & Seq
Reverse (-)
24970130 .. 24975827
5698 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g33220.t7

Sequence Viewer

Length: 2208 bp
ATGAAAGCTCGCAGCTCTGTAATGCCTCTTGAAGCTAATAGTCACCCAATGGGGTCCCATCAGGATAGTGGTGTTGCAAGGCCCATGGACTTTGAGATTAGGGAGCATGGAGATATGTCACATGGCAGGTCTTCTATGCCCAGGGACGTAGTGAACAACCAGATGCCTTCACCTGTCGCAAGGTCTCCATTAAACTTCAGGAGCAATTCGTTTGATGGGAGAAACCATGTTCATTTTGAGAAGAACAAAGATACAAATTTGGATTTTGGTTCACCTTCCATGAGATCTTCAAGTGGAGGTGTTAACAGTTCTTTTGAATCTCCCAAATGTCATTCTGTGTCGTCATATGCTTCCCCCAAAACTCAAGTCATTTGGTATTCTGATGGGGATATTGCAGCCATGGACATTTTCTCTGCTTCTAAACAGCTCTGGCTGGGCTTGGGTTCTGATGTAACAGAAGCCCATGTAAGGTTTCAGTTAGAAAGGTTTGGTGCCATGGAACAATTTTTTTTCTTTCCTCACAAAGGATTTGCCTTAGTTGAATATAGAAACATTCTTGATGCCATTAAGGCTCGTGAATATACACGGAGGCAATTTCCTTGGTGCATAAAGTTTATGGATACAGGACTGGGAACTAGAGGTGCTATGAATGGTGTTGCAGTTGGTTCTAGTAGTCATGTTTATGTCGGAAATGTTTTAAGTCAATGGGCCAGGGATGAGATTCTTCATGAATCAAGGAAGGTGCTTCGCAAGAGTCCTTACTCAGTCACTGATTTTAGCAATGAAGGTGCATTACTGATGGAATTTGATACTCCTGAAGAAGCTGCTGCTGTGTTGGCACATCTCAGACTACATCGTAAGGAAAGGAGCAACCACAGGGCACCATATGGTGCCGGACCAACTAATGTCGTAGTATCTCACATTGATGGTGCCAGATCTGCGCCTACCCCAACCCATGTTGACATCAGAAGCAACCTTGGAAACATGTCAAATACTGCTGCTACACCATTCACTGCAAAACATGAAAGCCACCCAATGGAGCTTGTATCTCCTAGAGTAAACTCTGAGAATCAGGGGAATTCGGTACAAAGTGGTTATATGTTTCAGTCAAACAGAGCTGTTACTGGCTCTACAGAGATGCTTGAAGCTGGCACTAGGAGAGTTGATGGTTATGACAGTAACATAGCTGTGAATCCTACACAAGGAGGTGGTCATGTTGCTTCTCATGCCAGTGAACCTAGGTGGTTGTATTCAAAACCTGGAATGGAGCTGCACTCTGCACCAGGAAGCATTCCATGCATTCCTGTACCAACACAGGGACCTCCTGCTCCACCACCTCCACAAATTTCCTCATCTCCATTTATGCGACCTGTTTACCCTCCTCCAAATAGTTCTTGGGATCCACGGGGTTCAAGTCATAATCATCCTATGAACCCAATATCACCTGGTGTAGTCCCCAACAATTTTCATGGTAATGCTATTGTACCTCCCTTCATTCCTGCTTCTGTGACTCCTCTTGCACAAATACAGGGAGCTCCAGGGCAGCAATATGATCGTATGTTTTCAGTGCCGACAGCACCACCACTATTATCATCTCAAATGCCACCTCCTCTACCTGAAATGCCACCTCCATTGTCCCCACCTCCACCGCCTTTGCCTCAATCACAGCCACCTTTTGTTCCCCCTCCACCCTGTTCGCCCTCTCCTCCTGTTCCTGTTTCAGAACCATCTGTTTTGGAAACTGCCGGACAACCCTCACAATATCAGTGGCAGGGAACATTGTGTAAGAGTGGTGTCCATTACAGTACAGTCAATGCATATAGAGTGGATTCTGATATTTGTAAATATTCCAATGCCACTTCTGAACCTATAGAATGGCCTCTTAAATTAGACATGACCAAGCGTACAGATTTTCGGCATGTGAAGTCGACATTTACTAGCACCCCATCACATAAGAGGGAAGTGTGTCGGTTGATCCCATCTTCTGCAGCAGATCAGAAAGGCTTTCAGGATTTCTTGTCATACTTGAAGCAGAGGGACTGCTCTGGAGTGATTAAGATCCCAGCTATGAATTCCATGTGGGCCAGGCTTCTCTTCATACTTCCATACTCGGAGGAGACTTGCTCTATGCTCTCTATTGCACCGTGTCAACCTGATTGCCTCATTGCTTTAATATTACCTAAAGAAACAAATTTTGAGTGGGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 SPOC

Protein Analysis

736

Amino Acids

80.69

Weight (kDa)

7.39

Isoelectric Point (pI)

58.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SPOC PF07744 888 - 1032 3.7e-21 SPOC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 117
AccB1I GGYRCC 4 cut(s) 491, 880, 890, 929
AccB7I CCANNNNNTGG 1 cut(s) 1036
AccI GTMKAC 1 cut(s) 1928
AciI CCGC 1 cut(s) 1649
AclWI GGATC 4 cut(s) 1394, 1407, 1969, 2053
AcsI RAATTY 6 cut(s) 256, 803, 1078, 1344, 2071, 2191
AcuI CTGAAG 2 cut(s) 181, 837
AdeI CACNNNGTG 1 cut(s) 1448
AfaI GTAC 5 cut(s) 1086, 1308, 1485, 1807, 1906
AfiI CCNNNNNNNGG 5 cut(s) 468, 524, 1036, 1202, 1316
AflIII ACRYGT 1 cut(s) 984
AgsI TTSAA 8 cut(s) 32, 291, 317, 542, 1145, 1254, 1413, 2029
AjnI CCWGG 7 cut(s) 140, 710, 1258, 1282, 1444, 1537, 2084
Alw21I GWGCWC 1 cut(s) 1537
Alw26I GTCTC 2 cut(s) 189, 2111
AlwI GGATC 4 cut(s) 1394, 1407, 1969, 2053
AlwNI CAGNNNCTG 1 cut(s) 770
AoxI GGCC 4 cut(s) 80, 708, 1877, 2082
ApeKI GCWGC 8 cut(s) 12, 395, 824, 827, 998, 1270, 1543, 1988
ApoI RAATTY 6 cut(s) 256, 803, 1078, 1344, 2071, 2191
ArsI GACNNNNNNTTYG 2 cut(s) 351, 383
AspA2I CCTAGG 1 cut(s) 1238
AspLEI GCGC 1 cut(s) 943
AspS9I GGNCC 6 cut(s) 54, 81, 708, 896, 1319, 2082
AsuHPI GGTGA 4 cut(s) 35, 162, 264, 1434
AvaII GGWCC 3 cut(s) 54, 896, 1319
AvrII CCTAGG 1 cut(s) 1238
BaeGI GKGCMC 1 cut(s) 883
BamHI GGATCC 1 cut(s) 1399
BanI GGYRCC 4 cut(s) 491, 880, 890, 929
BanII GRGCYC 1 cut(s) 1537
BarI GAAGNNNNNNTAC 2 cut(s) 777, 809
BauI CACGAG 1 cut(s) 573
BbsI GAAGAC 1 cut(s) 123
Bbv12I GWGCWC 1 cut(s) 1537
BbvI GCAGC 8 cut(s) 24, 407, 811, 814, 985, 1257, 1555, 2000
BccI CCATC 9 cut(s) 66, 209, 377, 793, 920, 1160, 1735, 1954, 1987
BcgI CGANNNNNNTGC 2 cut(s) 1535, 1569
BciT130I CCWGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
BciVI GTATCC 1 cut(s) 613
BcoDI GTCTC 2 cut(s) 189, 2111
BfaI CTAG 6 cut(s) 636, 669, 1053, 1155, 1239, 1938
BfmI CTRYAG 3 cut(s) 1131, 1869, 1986
BfuAI ACCTGC 1 cut(s) 117
BfuI GTATCC 1 cut(s) 613
BglI GCCNNNNNGGC 1 cut(s) 569
BglII AGATCT 2 cut(s) 284, 935
BisI GCNGC 8 cut(s) 13, 396, 825, 828, 999, 1271, 1544, 1989
BlnI CCTAGG 1 cut(s) 1238
BlsI GCNGC 8 cut(s) 14, 397, 826, 829, 1000, 1272, 1545, 1990
Bme1390I CCNGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
Bme18I GGWCC 3 cut(s) 54, 896, 1319
BmgT120I GGNCC 6 cut(s) 54, 81, 708, 896, 1319, 2082
BmiI GGNNCC 8 cut(s) 55, 56, 493, 882, 892, 931, 1320, 1401
BmrFI CCNGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
BmrI ACTGGG 1 cut(s) 638
BmsI GCATC 3 cut(s) 153, 550, 1128
BmuI ACTGGG 1 cut(s) 638
BpiI GAAGAC 1 cut(s) 123
BplI GAGNNNNNCTC 4 cut(s) 1259, 1291, 2108, 2140
BpmI CTGGAG 2 cut(s) 1521, 2067
BpuEI CTTGAG 1 cut(s) 348
BsaBI GATNNNNATC 1 cut(s) 2057
BsaI GGTCTC 1 cut(s) 189
Bsc4I CCNNNNNNNGG 5 cut(s) 468, 524, 1036, 1202, 1316
Bse1I ACTGG 3 cut(s) 633, 1129, 1230
Bse3DI GCAATG 2 cut(s) 787, 2163
Bse8I GATNNNNATC 1 cut(s) 2057
BseBI CCWGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
BseGI GGATG 2 cut(s) 721, 1423
BseJI GATNNNNATC 1 cut(s) 2057
BseLI CCNNNNNNNGG 5 cut(s) 468, 524, 1036, 1202, 1316
BseMI GCAATG 2 cut(s) 787, 2163
BseMII CTCAG 3 cut(s) 777, 859, 1056
BseNI ACTGG 3 cut(s) 633, 1129, 1230
BseRI GAGGAG 5 cut(s) 1371, 1503, 1599, 1695, 2129
BseSI GKGCMC 1 cut(s) 883
BseXI GCAGC 8 cut(s) 24, 407, 811, 814, 985, 1257, 1555, 2000
BseYI CCCAGC 2 cut(s) 433, 2062
BsgI GTGCAG 2 cut(s) 1256, 1263
BshFI GGCC 4 cut(s) 82, 710, 1879, 2084
BshNI GGYRCC 4 cut(s) 491, 880, 890, 929
BsiHKAI GWGCWC 1 cut(s) 1537
BsiSI CCGG 2 cut(s) 894, 1746
BslFI GGGAC 6 cut(s) 40, 158, 1332, 1439, 1621, 2051
BslI CCNNNNNNNGG 5 cut(s) 468, 524, 1036, 1202, 1316
BsmAI GTCTC 2 cut(s) 189, 2111
BsmFI GGGAC 6 cut(s) 40, 158, 1332, 1439, 1621, 2051
BsmI GAATGC 2 cut(s) 1290, 1299
BsnI GGCC 4 cut(s) 82, 710, 1879, 2084
Bso31I GGTCTC 1 cut(s) 189
Bsp1286I GDGCHC 2 cut(s) 883, 1537
Bsp143I GATC 7 cut(s) 284, 935, 1399, 1552, 1974, 1993, 2058
Bsp19I CCATGG 3 cut(s) 84, 399, 495
BspACI CCGC 1 cut(s) 1649
BspANI GGCC 4 cut(s) 82, 710, 1879, 2084
BspCNI CTCAG 3 cut(s) 776, 858, 1057
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 8 cut(s) 55, 56, 493, 882, 892, 931, 1320, 1401
BspMAI CTGCAG 1 cut(s) 1990
BspMI ACCTGC 1 cut(s) 117
BspPI GGATC 4 cut(s) 1394, 1407, 1969, 2053
BspT107I GGYRCC 4 cut(s) 491, 880, 890, 929
BspTNI GGTCTC 1 cut(s) 189
BsrDI GCAATG 2 cut(s) 787, 2163
BsrI ACTGG 3 cut(s) 633, 1129, 1230
BssMI GATC 7 cut(s) 284, 935, 1399, 1552, 1974, 1993, 2058
BssSI CACGAG 1 cut(s) 573
BssT1I CCWWGG 6 cut(s) 84, 399, 495, 599, 976, 1238
Bst2BI CACGAG 1 cut(s) 573
Bst2UI CCWGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
Bst4CI ACNGT 5 cut(s) 308, 1178, 1805, 1810, 2145
Bst6I CTCTTC 1 cut(s) 2099
BstAPI GCANNNNNTGC 1 cut(s) 1296
BstC8I GCNNGC 2 cut(s) 10, 1150
BstDEI CTNAG 4 cut(s) 535, 763, 845, 1065
BstDSI CCRYGG 4 cut(s) 84, 399, 495, 1403
BstENI CCTNNNNNAGG 2 cut(s) 522, 1200
BstF5I GGATG 2 cut(s) 721, 1423
BstHHI GCGC 1 cut(s) 943
BstKTI GATC 7 cut(s) 287, 938, 1402, 1555, 1977, 1996, 2061
BstMAI GTCTC 2 cut(s) 189, 2111
BstMBI GATC 7 cut(s) 284, 935, 1399, 1552, 1974, 1993, 2058
BstMWI GCNNNNNNNGC 5 cut(s) 569, 836, 938, 1226, 1296
BstNI CCWGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
BstNSI RCATGY 2 cut(s) 988, 1922
BstSCI CCNGG 7 cut(s) 140, 710, 1258, 1282, 1444, 1537, 2084
BstSFI CTRYAG 3 cut(s) 1131, 1869, 1986
BstSLI GKGCMC 1 cut(s) 883
BstV1I GCAGC 8 cut(s) 24, 407, 811, 814, 985, 1257, 1555, 2000
BstV2I GAAGAC 1 cut(s) 123
BstX2I RGATCY 4 cut(s) 284, 935, 1399, 2058
BstYI RGATCY 4 cut(s) 284, 935, 1399, 2058
BsuI GTATCC 1 cut(s) 613
BsuRI GGCC 4 cut(s) 82, 710, 1879, 2084
BtgI CCRYGG 4 cut(s) 84, 399, 495, 1403
BtsCI GGATG 2 cut(s) 721, 1423
BtsI GCAGTG 1 cut(s) 1011
BtsIMutI CAGTG 5 cut(s) 768, 1011, 1237, 1572, 1772
BveI ACCTGC 1 cut(s) 117
Cac8I GCNNGC 2 cut(s) 10, 1150
CaiI CAGNNNCTG 1 cut(s) 770
CciI TCATGA 1 cut(s) 727
CfoI GCGC 1 cut(s) 943
Cfr13I GGNCC 6 cut(s) 54, 81, 708, 896, 1319, 2082
CsiI ACCWGGT 1 cut(s) 1444
Csp6I GTAC 5 cut(s) 1085, 1307, 1484, 1806, 1905
CspCI CAANNNNNGTGG 6 cut(s) 1614, 1635, 1649, 1670, 1748, 1783
CviQI GTAC 5 cut(s) 1085, 1307, 1484, 1806, 1905
DdeI CTNAG 4 cut(s) 535, 763, 845, 1065
DpnI GATC 7 cut(s) 286, 937, 1401, 1554, 1976, 1995, 2060
DpnII GATC 7 cut(s) 284, 935, 1399, 1552, 1974, 1993, 2058
DraIII CACNNNGTG 1 cut(s) 1448
Eam1104I CTCTTC 1 cut(s) 2099
EarI CTCTTC 1 cut(s) 2099
Ecl136II GAGCTC 1 cut(s) 1535
Eco130I CCWWGG 6 cut(s) 84, 399, 495, 599, 976, 1238
Eco24I GRGCYC 1 cut(s) 1537
Eco31I GGTCTC 1 cut(s) 189
Eco47I GGWCC 3 cut(s) 54, 896, 1319
Eco53kI GAGCTC 1 cut(s) 1535
Eco57I CTGAAG 2 cut(s) 181, 837
EcoICRI GAGCTC 1 cut(s) 1535
EcoNI CCTNNNNNAGG 2 cut(s) 522, 1200
EcoO109I RGGNCCY 2 cut(s) 54, 1319
EcoRI GAATTC 2 cut(s) 1078, 2071
EcoRII CCWGG 7 cut(s) 140, 710, 1258, 1282, 1444, 1537, 2084
EcoT14I CCWWGG 6 cut(s) 84, 399, 495, 599, 976, 1238
EcoT22I ATGCAT 2 cut(s) 1301, 1819
EcoT38I GRGCYC 1 cut(s) 1537
ErhI CCWWGG 6 cut(s) 84, 399, 495, 599, 976, 1238
FaqI GGGAC 6 cut(s) 40, 158, 1332, 1439, 1621, 2051
FauNDI CATATG 2 cut(s) 346, 886
FblI GTMKAC 1 cut(s) 1928
Fnu4HI GCNGC 8 cut(s) 13, 396, 825, 828, 999, 1271, 1544, 1989
FokI GGATG 2 cut(s) 728, 1410
FriOI GRGCYC 1 cut(s) 1537
Fsp4HI GCNGC 8 cut(s) 13, 396, 825, 828, 999, 1271, 1544, 1989
FspBI CTAG 6 cut(s) 636, 669, 1053, 1155, 1239, 1938
GlaI GCGC 1 cut(s) 942
GluI GCNGC 8 cut(s) 13, 396, 825, 828, 999, 1271, 1544, 1989
GsaI CCCAGC 2 cut(s) 437, 2066
GsuI CTGGAG 2 cut(s) 1521, 2067
HaeIII GGCC 4 cut(s) 82, 710, 1879, 2084
HapII CCGG 2 cut(s) 894, 1746
HhaI GCGC 1 cut(s) 943
Hin6I GCGC 1 cut(s) 941
HinP1I GCGC 1 cut(s) 941
HincII GTYRAC 4 cut(s) 304, 961, 1929, 2150
HindII GTYRAC 4 cut(s) 304, 961, 1929, 2150
HinfI GANTC 8 cut(s) 317, 721, 731, 754, 1069, 1192, 1510, 1829
HpaI GTTAAC 1 cut(s) 304
HpaII CCGG 2 cut(s) 894, 1746
HphI GGTGA 4 cut(s) 35, 162, 264, 1434
Hpy166II GTNNAC 9 cut(s) 154, 272, 304, 961, 1060, 1235, 1375, 1929, 2150
Hpy188III TCNNGA 9 cut(s) 29, 62, 199, 557, 575, 728, 815, 2009, 2046
Hpy8I GTNNAC 9 cut(s) 154, 272, 304, 961, 1060, 1235, 1375, 1929, 2150
HpyAV CCTTC 5 cut(s) 177, 285, 733, 779, 1501
HpyCH4III ACNGT 5 cut(s) 308, 1178, 1805, 1810, 2145
HpyCH4IV ACGT 1 cut(s) 147
HpyF10VI GCNNNNNNNGC 5 cut(s) 569, 836, 938, 1226, 1296
HpyF3I CTNAG 4 cut(s) 535, 763, 845, 1065
HpySE526I ACGT 1 cut(s) 147
HspAI GCGC 1 cut(s) 941
KflI GGGWCCC 1 cut(s) 54
KspAI GTTAAC 1 cut(s) 304
Kzo9I GATC 7 cut(s) 284, 935, 1399, 1552, 1974, 1993, 2058
LmnI GCTCC 8 cut(s) 103, 201, 867, 1039, 1267, 1333, 1532, 1540
Lsp1109I GCAGC 8 cut(s) 24, 407, 811, 814, 985, 1257, 1555, 2000
LweI GCATC 3 cut(s) 153, 550, 1128
MabI ACCWGGT 1 cut(s) 1444
MaeI CTAG 6 cut(s) 636, 669, 1053, 1155, 1239, 1938
MaeII ACGT 1 cut(s) 147
MaeIII GTNAC 7 cut(s) 41, 117, 451, 766, 1120, 1178, 1507
MalI GATC 7 cut(s) 286, 937, 1401, 1554, 1976, 1995, 2060
MboI GATC 7 cut(s) 284, 935, 1399, 1552, 1974, 1993, 2058
MboII GAAGA 7 cut(s) 123, 253, 279, 716, 830, 1974, 2086
MflI RGATCY 4 cut(s) 284, 935, 1399, 2058
MhlI GDGCHC 2 cut(s) 883, 1537
MlyI GAGTC 2 cut(s) 763, 1504
MmeI TCCRAC 1 cut(s) 667
Mph1103I ATGCAT 2 cut(s) 1301, 1819
MseI TTAA 7 cut(s) 191, 303, 567, 698, 1884, 2055, 2171
MslI CAYNNNNRTG 5 cut(s) 681, 924, 1187, 1230, 1473
MspI CCGG 2 cut(s) 894, 1746
MspR9I CCNGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
Mva1269I GAATGC 2 cut(s) 1290, 1299
MvaI CCWGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
MwoI GCNNNNNNNGC 5 cut(s) 569, 836, 938, 1226, 1296
NcoI CCATGG 3 cut(s) 84, 399, 495
NdeI CATATG 2 cut(s) 346, 886
NdeII GATC 7 cut(s) 284, 935, 1399, 1552, 1974, 1993, 2058
NlaIV GGNNCC 8 cut(s) 55, 56, 493, 882, 892, 931, 1320, 1401
NmuCI GTSAC 4 cut(s) 41, 117, 766, 1507
NsiI ATGCAT 2 cut(s) 1301, 1819
NspI RCATGY 2 cut(s) 988, 1922
PagI TCATGA 1 cut(s) 727
PasI CCCWGGG 1 cut(s) 141
PciI ACATGT 1 cut(s) 984
PctI GAATGC 2 cut(s) 1290, 1299
PfeI GAWTC 6 cut(s) 317, 721, 731, 1069, 1192, 1829
PflMI CCANNNNNTGG 1 cut(s) 1036
PkrI GCNGC 8 cut(s) 14, 397, 826, 829, 1000, 1272, 1545, 1990
PleI GAGTC 2 cut(s) 762, 1504
PpsI GAGTC 2 cut(s) 762, 1504
PpuMI RGGWCCY 2 cut(s) 54, 1319
PscI ACATGT 1 cut(s) 984
Psp124BI GAGCTC 1 cut(s) 1537
Psp5II RGGWCCY 2 cut(s) 54, 1319
Psp6I CCWGG 7 cut(s) 140, 710, 1258, 1282, 1444, 1537, 2084
PspFI CCCAGC 2 cut(s) 433, 2062
PspGI CCWGG 7 cut(s) 140, 710, 1258, 1282, 1444, 1537, 2084
PspN4I GGNNCC 8 cut(s) 55, 56, 493, 882, 892, 931, 1320, 1401
PspPI GGNCC 6 cut(s) 54, 81, 708, 896, 1319, 2082
PspPPI RGGWCCY 2 cut(s) 54, 1319
PstI CTGCAG 1 cut(s) 1990
PstNI CAGNNNCTG 1 cut(s) 770
PsuI RGATCY 4 cut(s) 284, 935, 1399, 2058
RsaI GTAC 5 cut(s) 1086, 1308, 1485, 1807, 1906
RsaNI GTAC 5 cut(s) 1085, 1307, 1484, 1806, 1905
RseI CAYNNNNRTG 5 cut(s) 681, 924, 1187, 1230, 1473
SacI GAGCTC 1 cut(s) 1537
SalI GTCGAC 1 cut(s) 1927
SaqAI TTAA 7 cut(s) 191, 303, 567, 698, 1884, 2055, 2171
SatI GCNGC 8 cut(s) 13, 396, 825, 828, 999, 1271, 1544, 1989
Sau3AI GATC 7 cut(s) 284, 935, 1399, 1552, 1974, 1993, 2058
Sau96I GGNCC 6 cut(s) 54, 81, 708, 896, 1319, 2082
SchI GAGTC 2 cut(s) 763, 1504
ScrFI CCNGG 7 cut(s) 142, 712, 1260, 1284, 1446, 1539, 2086
SduI GDGCHC 2 cut(s) 883, 1537
SexAI ACCWGGT 1 cut(s) 1444
SfaNI GCATC 3 cut(s) 153, 550, 1128
SfcI CTRYAG 3 cut(s) 1131, 1869, 1986
SinI GGWCC 3 cut(s) 54, 896, 1319
SmiMI CAYNNNNRTG 5 cut(s) 681, 924, 1187, 1230, 1473
SmlI CTYRAG 1 cut(s) 363
SmoI CTYRAG 1 cut(s) 363
SsiI CCGC 1 cut(s) 1649
SspI AATATT 2 cut(s) 1847, 2175
SspMI CTAG 6 cut(s) 636, 669, 1053, 1155, 1239, 1938
SstI GAGCTC 1 cut(s) 1537
StyD4I CCNGG 7 cut(s) 140, 710, 1258, 1282, 1444, 1537, 2084
StyI CCWWGG 6 cut(s) 84, 399, 495, 599, 976, 1238
TaaI ACNGT 5 cut(s) 308, 1178, 1805, 1810, 2145
TaiI ACGT 1 cut(s) 150
TaqI TCGA 1 cut(s) 1928
TatI WGTACW 1 cut(s) 1805
TfiI GAWTC 6 cut(s) 317, 721, 731, 1069, 1192, 1829
Tru1I TTAA 7 cut(s) 191, 303, 567, 698, 1884, 2055, 2171
Tru9I TTAA 7 cut(s) 191, 303, 567, 698, 1884, 2055, 2171
TscAI CASTG 5 cut(s) 775, 1018, 1237, 1572, 1772
TseFI GTSAC 4 cut(s) 41, 117, 766, 1507
TseI GCWGC 8 cut(s) 12, 395, 824, 827, 998, 1270, 1543, 1988
Tsp45I GTSAC 4 cut(s) 41, 117, 766, 1507
TspGWI ACGGA 1 cut(s) 601
TspRI CASTG 5 cut(s) 775, 1018, 1237, 1572, 1772
Van91I CCANNNNNTGG 1 cut(s) 1036
VpaK11BI GGWCC 3 cut(s) 54, 896, 1319
XagI CCTNNNNNAGG 2 cut(s) 522, 1200
XapI RAATTY 6 cut(s) 256, 803, 1078, 1344, 2071, 2191
XceI RCATGY 2 cut(s) 988, 1922
XcmI CCANNNNNNNNNTGG 2 cut(s) 65, 1392
XmaJI CCTAGG 1 cut(s) 1238
XmiI GTMKAC 1 cut(s) 1928
XspI CTAG 6 cut(s) 636, 669, 1053, 1155, 1239, 1938
Zsp2I ATGCAT 2 cut(s) 1301, 1819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.