Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27750 |
| fragaria_vesca | FvH4_2g33220 FvH4_2g33220 FvH4_2g33220 FvH4_2g33220 FvH4_2g33220 FvH4_2g33220 FvH4_2g33220 FvH4_2g33220 FvH4_2g33220 |
| malus_domestica | MD08G1086000.v1.1 |
| prunus_persica | Prupe.1G423900_v2.0.a1 |
| pyrus_communis | pycom08g07070 |
| rosa_chinensis | RchiOBHm_Chr6g0309441 |
| rosa_laevigata | RLG00000010564 |
| rosa_multiflora | Rmu_sc0022500.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00159390 |
| rosa_rugosa | Rorug06G0372100 |
| rosa_samantha | Rh6AG485200 Rh6BG494500 Rh6CG499500 Rh6DG485600 |
| rosa_wichuraiana | Rw6G042260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 4083 |
| Acc36I | ACCTGC | 4 cut(s) | 1431, 4083, 5337, 5834 |
| AccB1I | GGYRCC | 7 cut(s) | 1142, 1808, 2197, 2207, 2243, 2465, 3926 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2350, 6068 |
| AccBSI | CCGCTC | 1 cut(s) | 4910 |
| AccI | GTMKAC | 2 cut(s) | 172, 3866 |
| AccII | CGCG | 7 cut(s) | 125, 180, 380, 543, 1903, 4116, 4173 |
| AcoI | YGGCCR | 1 cut(s) | 116 |
| AcuI | CTGAAG | 6 cut(s) | 653, 1495, 1794, 2154, 5469, 5910 |
| AcyI | GRCGYC | 3 cut(s) | 521, 3927, 3948 |
| AdeI | CACNNNGTG | 2 cut(s) | 2762, 5945 |
| AflII | CTTAAG | 1 cut(s) | 3194 |
| AflIII | ACRYGT | 1 cut(s) | 2298 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 5332 |
| AhlI | ACTAGT | 5 cut(s) | 899, 3824, 5413, 5768, 6235 |
| AjnI | CCWGG | 9 cut(s) | 147, 1454, 2289, 2572, 2596, 2758, 4213, 4489, 6061 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3863, 3895 |
| Alw21I | GWGCWC | 4 cut(s) | 736, 2851, 4222, 4963 |
| Alw26I | GTCTC | 8 cut(s) | 626, 1503, 3422, 3963, 4024, 4241, 5348, 5729 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 5453, 6068 |
| Ama87I | CYCGRG | 2 cut(s) | 4221, 5282 |
| AoxI | GGCC | 9 cut(s) | 3, 116, 1394, 2025, 3188, 3393, 3919, 4467, 6171 |
| AseI | ATTAAT | 1 cut(s) | 4941 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 2011, 4198, 4986, 5009, 5292, 5907 |
| AspA2I | CCTAGG | 1 cut(s) | 2552 |
| AspLEI | GCGC | 6 cut(s) | 125, 1905, 3454, 3802, 3929, 4175 |
| AspS9I | GGNCC | 5 cut(s) | 1395, 2025, 3393, 4468, 5479 |
| AsuC2I | CCSGG | 1 cut(s) | 6175 |
| AsuII | TTCGAA | 1 cut(s) | 353 |
| AsuNHI | GCTAGC | 1 cut(s) | 973 |
| AvaI | CYCGRG | 2 cut(s) | 4221, 5282 |
| AvaII | GGWCC | 1 cut(s) | 5479 |
| AvrII | CCTAGG | 1 cut(s) | 2552 |
| AxyI | CCTNAGG | 2 cut(s) | 3609, 4017 |
| BaeGI | GKGCMC | 2 cut(s) | 2200, 4619 |
| BamHI | GGATCC | 4 cut(s) | 2713, 4210, 4502, 4894 |
| BanI | GGYRCC | 7 cut(s) | 1142, 1808, 2197, 2207, 2243, 2465, 3926 |
| BanII | GRGCYC | 1 cut(s) | 2851 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2094, 2126 |
| BauI | CACGAG | 1 cut(s) | 1890 |
| BbsI | GAAGAC | 4 cut(s) | 1437, 3661, 4505, 5331 |
| Bbv12I | GWGCWC | 4 cut(s) | 736, 2851, 4222, 4963 |
| BbvCI | CCTCAGC | 1 cut(s) | 2638 |
| BceAI | ACGGC | 5 cut(s) | 131, 3748, 3935, 4473, 4494 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4292, 4326 |
| BciT130I | CCWGG | 9 cut(s) | 149, 1456, 2291, 2574, 2598, 2760, 4215, 4491, 6063 |
| BciVI | GTATCC | 4 cut(s) | 433, 1930, 2371, 4573 |
| BclI | TGATCA | 1 cut(s) | 3363 |
| BcnI | CCSGG | 1 cut(s) | 6175 |
| BcoDI | GTCTC | 8 cut(s) | 626, 1503, 3422, 3963, 4024, 4241, 5348, 5729 |
| BcuI | ACTAGT | 5 cut(s) | 899, 3824, 5413, 5768, 6235 |
| BfmI | CTRYAG | 6 cut(s) | 2445, 3180, 3297, 4079, 4866, 5424 |
| BfoI | RGCGCY | 1 cut(s) | 3930 |
| BfrI | CTTAAG | 1 cut(s) | 3194 |
| BfuAI | ACCTGC | 4 cut(s) | 1431, 4083, 5337, 5834 |
| BfuI | GTATCC | 4 cut(s) | 433, 1930, 2371, 4573 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1886 |
| BglII | AGATCT | 2 cut(s) | 1598, 2249 |
| BlnI | CCTAGG | 1 cut(s) | 2552 |
| BmcAI | AGTACT | 2 cut(s) | 3823, 5969 |
| Bme18I | GGWCC | 1 cut(s) | 5479 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 5332 |
| BmeT110I | CYCGRG | 2 cut(s) | 4221, 5282 |
| BmgT120I | GGNCC | 5 cut(s) | 1395, 2025, 3393, 4468, 5479 |
| BmrI | ACTGGG | 2 cut(s) | 718, 1955 |
| BmtI | GCTAGC | 1 cut(s) | 977 |
| BmuI | ACTGGG | 2 cut(s) | 718, 1955 |
| BpiI | GAAGAC | 4 cut(s) | 1437, 3661, 4505, 5331 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2330, 2362, 3419, 3451 |
| BpmI | CTGGAG | 7 cut(s) | 117, 280, 2835, 3378, 4512, 4550, 4746 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2638 |
| Bpu14I | TTCGAA | 1 cut(s) | 353 |
| BpuEI | CTTGAG | 3 cut(s) | 284, 3989, 4947 |
| BpuMI | CCSGG | 1 cut(s) | 6175 |
| BsaAI | YACGTR | 1 cut(s) | 731 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1108, 1212, 3368 |
| BsaHI | GRCGYC | 3 cut(s) | 521, 3927, 3948 |
| BsaI | GGTCTC | 1 cut(s) | 1503 |
| BsaWI | WCCGGW | 1 cut(s) | 3600 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1483, 1513, 2838, 2868, 4262, 4292 |
| Bse118I | RCCGGY | 1 cut(s) | 3805 |
| Bse1I | ACTGG | 8 cut(s) | 413, 724, 1044, 1279, 1950, 2443, 2852, 4533 |
| Bse21I | CCTNAGG | 2 cut(s) | 3609, 4017 |
| Bse3DI | GCAATG | 5 cut(s) | 958, 2104, 2529, 3474, 4366 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1108, 1212, 3368 |
| BseBI | CCWGG | 9 cut(s) | 149, 1456, 2291, 2574, 2598, 2760, 4215, 4491, 6063 |
| BseJI | GATNNNNATC | 3 cut(s) | 1108, 1212, 3368 |
| BseMI | GCAATG | 5 cut(s) | 958, 2104, 2529, 3474, 4366 |
| BseNI | ACTGG | 8 cut(s) | 413, 724, 1044, 1279, 1950, 2443, 2852, 4533 |
| BseSI | GKGCMC | 2 cut(s) | 2200, 4619 |
| BseX3I | CGGCCG | 1 cut(s) | 116 |
| BseYI | CCCAGC | 5 cut(s) | 1747, 3373, 3759, 4879, 6068 |
| BsgI | GTGCAG | 4 cut(s) | 23, 2577, 2876, 5967 |
| Bsh1236I | CGCG | 7 cut(s) | 125, 180, 380, 543, 1903, 4116, 4173 |
| Bsh1285I | CGRYCG | 1 cut(s) | 119 |
| BshFI | GGCC | 9 cut(s) | 5, 118, 1396, 2027, 3190, 3395, 3921, 4469, 6173 |
| BshNI | GGYRCC | 7 cut(s) | 1142, 1808, 2197, 2207, 2243, 2465, 3926 |
| BsiEI | CGRYCG | 1 cut(s) | 119 |
| BsiHKAI | GWGCWC | 4 cut(s) | 736, 2851, 4222, 4963 |
| BsiHKCI | CYCGRG | 2 cut(s) | 4221, 5282 |
| BsiSI | CCGG | 7 cut(s) | 555, 2211, 3601, 3633, 3745, 3806, 6174 |
| BslFI | GGGAC | 8 cut(s) | 1472, 1651, 2753, 2932, 3362, 3659, 3684, 5465 |
| BsmAI | GTCTC | 8 cut(s) | 626, 1503, 3422, 3963, 4024, 4241, 5348, 5729 |
| BsmFI | GGGAC | 8 cut(s) | 1472, 1651, 2753, 2932, 3362, 3659, 3684, 5465 |
| BsmI | GAATGC | 5 cut(s) | 455, 648, 2604, 2613, 5767 |
| BsnI | GGCC | 9 cut(s) | 5, 118, 1396, 2027, 3190, 3395, 3921, 4469, 6173 |
| Bso31I | GGTCTC | 1 cut(s) | 1503 |
| BsoBI | CYCGRG | 2 cut(s) | 4221, 5282 |
| Bsp119I | TTCGAA | 1 cut(s) | 353 |
| Bsp1286I | GDGCHC | 6 cut(s) | 736, 2200, 2851, 4222, 4619, 4963 |
| Bsp1407I | TGTACA | 2 cut(s) | 313, 4429 |
| Bsp19I | CCATGG | 4 cut(s) | 1398, 1713, 1812, 4566 |
| BspANI | GGCC | 9 cut(s) | 5, 118, 1396, 2027, 3190, 3395, 3921, 4469, 6173 |
| BspFNI | CGCG | 7 cut(s) | 125, 180, 380, 543, 1903, 4116, 4173 |
| BspHI | TCATGA | 2 cut(s) | 4324, 5320 |
| BspMAI | CTGCAG | 2 cut(s) | 3301, 4870 |
| BspMI | ACCTGC | 4 cut(s) | 1431, 4083, 5337, 5834 |
| BspOI | GCTAGC | 1 cut(s) | 977 |
| BspT104I | TTCGAA | 1 cut(s) | 353 |
| BspT107I | GGYRCC | 7 cut(s) | 1142, 1808, 2197, 2207, 2243, 2465, 3926 |
| BspTI | CTTAAG | 1 cut(s) | 3194 |
| BspTNI | GGTCTC | 1 cut(s) | 1503 |
| BsrBI | CCGCTC | 1 cut(s) | 4910 |
| BsrDI | GCAATG | 5 cut(s) | 958, 2104, 2529, 3474, 4366 |
| BsrFI | RCCGGY | 1 cut(s) | 3805 |
| BsrGI | TGTACA | 2 cut(s) | 313, 4429 |
| BsrI | ACTGG | 8 cut(s) | 413, 724, 1044, 1279, 1950, 2443, 2852, 4533 |
| BssAI | RCCGGY | 1 cut(s) | 3805 |
| BssNI | GRCGYC | 3 cut(s) | 521, 3927, 3948 |
| BssSI | CACGAG | 1 cut(s) | 1890 |
| BssT1I | CCWWGG | 9 cut(s) | 1398, 1713, 1812, 2028, 2552, 3870, 4122, 4566, 5729 |
| Bst2BI | CACGAG | 1 cut(s) | 1890 |
| Bst2UI | CCWGG | 9 cut(s) | 149, 1456, 2291, 2574, 2598, 2760, 4215, 4491, 6063 |
| Bst6I | CTCTTC | 6 cut(s) | 2467, 3410, 3420, 5228, 5322, 6174 |
| BstACI | GRCGYC | 3 cut(s) | 521, 3927, 3948 |
| BstAFI | CTTAAG | 1 cut(s) | 3194 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2610, 5591 |
| BstAUI | TGTACA | 2 cut(s) | 313, 4429 |
| BstBAI | YACGTR | 1 cut(s) | 731 |
| BstBI | TTCGAA | 1 cut(s) | 353 |
| BstDSI | CCRYGG | 7 cut(s) | 378, 1398, 1713, 1812, 2717, 3951, 4566 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1839 |
| BstFNI | CGCG | 7 cut(s) | 125, 180, 380, 543, 1903, 4116, 4173 |
| BstH2I | RGCGCY | 1 cut(s) | 3930 |
| BstHHI | GCGC | 6 cut(s) | 125, 1905, 3454, 3802, 3929, 4175 |
| BstMAI | GTCTC | 8 cut(s) | 626, 1503, 3422, 3963, 4024, 4241, 5348, 5729 |
| BstMCI | CGRYCG | 1 cut(s) | 119 |
| BstNI | CCWGG | 9 cut(s) | 149, 1456, 2291, 2574, 2598, 2760, 4215, 4491, 6063 |
| BstNSI | RCATGY | 2 cut(s) | 2302, 3233 |
| BstSFI | CTRYAG | 6 cut(s) | 2445, 3180, 3297, 4079, 4866, 5424 |
| BstSLI | GKGCMC | 2 cut(s) | 2200, 4619 |
| BstUI | CGCG | 7 cut(s) | 125, 180, 380, 543, 1903, 4116, 4173 |
| BstV2I | GAAGAC | 4 cut(s) | 1437, 3661, 4505, 5331 |
| BstX2I | RGATCY | 9 cut(s) | 1054, 1598, 2249, 2713, 3369, 4210, 4502, 4894, 5218 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4129 |
| BstYI | RGATCY | 9 cut(s) | 1054, 1598, 2249, 2713, 3369, 4210, 4502, 4894, 5218 |
| BstZI | CGGCCG | 1 cut(s) | 116 |
| Bsu36I | CCTNAGG | 2 cut(s) | 3609, 4017 |
| BsuI | GTATCC | 4 cut(s) | 433, 1930, 2371, 4573 |
| BsuRI | GGCC | 9 cut(s) | 5, 118, 1396, 2027, 3190, 3395, 3921, 4469, 6173 |
| BtgI | CCRYGG | 7 cut(s) | 378, 1398, 1713, 1812, 2717, 3951, 4566 |
| BtgZI | GCGATG | 3 cut(s) | 54, 2156, 4097 |
| BtsI | GCAGTG | 4 cut(s) | 363, 504, 1285, 4371 |
| BveI | ACCTGC | 4 cut(s) | 1431, 4083, 5337, 5834 |
| CaiI | CAGNNNCTG | 2 cut(s) | 5453, 6068 |
| CciI | TCATGA | 2 cut(s) | 4324, 5320 |
| CfoI | GCGC | 6 cut(s) | 125, 1905, 3454, 3802, 3929, 4175 |
| Cfr10I | RCCGGY | 1 cut(s) | 3805 |
| Cfr13I | GGNCC | 5 cut(s) | 1395, 2025, 3393, 4468, 5479 |
| Cfr42I | CCGCGG | 1 cut(s) | 381 |
| CseI | GACGC | 3 cut(s) | 510, 3775, 3956 |
| CsiI | ACCWGGT | 1 cut(s) | 2758 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 352, 387, 2925, 2946, 2960, 2981, 3059, 3094 |
| DinI | GGCGCC | 1 cut(s) | 3928 |
| DraI | TTTAAA | 2 cut(s) | 1126, 1150 |
| DraIII | CACNNNGTG | 2 cut(s) | 2762, 5945 |
| DriI | GACNNNNNGTC | 1 cut(s) | 5332 |
| EaeI | YGGCCR | 1 cut(s) | 116 |
| EagI | CGGCCG | 1 cut(s) | 116 |
| Eam1104I | CTCTTC | 6 cut(s) | 2467, 3410, 3420, 5228, 5322, 6174 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 5332 |
| EarI | CTCTTC | 6 cut(s) | 2467, 3410, 3420, 5228, 5322, 6174 |
| EciI | GGCGGA | 2 cut(s) | 75, 3724 |
| Ecl136II | GAGCTC | 1 cut(s) | 2849 |
| EclXI | CGGCCG | 1 cut(s) | 116 |
| Eco130I | CCWWGG | 9 cut(s) | 1398, 1713, 1812, 2028, 2552, 3870, 4122, 4566, 5729 |
| Eco24I | GRGCYC | 1 cut(s) | 2851 |
| Eco31I | GGTCTC | 1 cut(s) | 1503 |
| Eco47I | GGWCC | 1 cut(s) | 5479 |
| Eco52I | CGGCCG | 1 cut(s) | 116 |
| Eco53kI | GAGCTC | 1 cut(s) | 2849 |
| Eco57I | CTGAAG | 6 cut(s) | 653, 1495, 1794, 2154, 5469, 5910 |
| Eco81I | CCTNAGG | 2 cut(s) | 3609, 4017 |
| Eco88I | CYCGRG | 2 cut(s) | 4221, 5282 |
| EcoICRI | GAGCTC | 1 cut(s) | 2849 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1839 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4468, 5479 |
| EcoRI | GAATTC | 5 cut(s) | 2392, 2506, 3382, 6057, 6162 |
| EcoRII | CCWGG | 9 cut(s) | 147, 1454, 2289, 2572, 2596, 2758, 4213, 4489, 6061 |
| EcoT14I | CCWWGG | 9 cut(s) | 1398, 1713, 1812, 2028, 2552, 3870, 4122, 4566, 5729 |
| EcoT22I | ATGCAT | 3 cut(s) | 405, 2615, 3130 |
| EcoT38I | GRGCYC | 1 cut(s) | 2851 |
| EgeI | GGCGCC | 1 cut(s) | 3928 |
| EheI | GGCGCC | 1 cut(s) | 3928 |
| ErhI | CCWWGG | 9 cut(s) | 1398, 1713, 1812, 2028, 2552, 3870, 4122, 4566, 5729 |
| FaqI | GGGAC | 8 cut(s) | 1472, 1651, 2753, 2932, 3362, 3659, 3684, 5465 |
| FauI | CCCGC | 1 cut(s) | 872 |
| FauNDI | CATATG | 4 cut(s) | 1314, 1660, 2203, 4307 |
| FbaI | TGATCA | 1 cut(s) | 3363 |
| FblI | GTMKAC | 2 cut(s) | 172, 3866 |
| FriOI | GRGCYC | 1 cut(s) | 2851 |
| GlaI | GCGC | 6 cut(s) | 124, 1904, 3453, 3801, 3928, 4174 |
| GsaI | CCCAGC | 5 cut(s) | 1751, 3377, 3763, 4883, 6072 |
| GsuI | CTGGAG | 7 cut(s) | 117, 280, 2835, 3378, 4512, 4550, 4746 |
| HaeII | RGCGCY | 1 cut(s) | 3930 |
| HaeIII | GGCC | 9 cut(s) | 5, 118, 1396, 2027, 3190, 3395, 3921, 4469, 6173 |
| HapII | CCGG | 7 cut(s) | 555, 2211, 3601, 3633, 3745, 3806, 6174 |
| HgaI | GACGC | 3 cut(s) | 510, 3775, 3956 |
| HhaI | GCGC | 6 cut(s) | 125, 1905, 3454, 3802, 3929, 4175 |
| Hin1I | GRCGYC | 3 cut(s) | 521, 3927, 3948 |
| Hin6I | GCGC | 6 cut(s) | 123, 1903, 3452, 3800, 3927, 4173 |
| HinP1I | GCGC | 6 cut(s) | 123, 1903, 3452, 3800, 3927, 4173 |
| HincII | GTYRAC | 6 cut(s) | 525, 1310, 2275, 3240, 3461, 3867 |
| HindII | GTYRAC | 6 cut(s) | 525, 1310, 2275, 3240, 3461, 3867 |
| HindIII | AAGCTT | 2 cut(s) | 1507, 3777 |
| HpaII | CCGG | 7 cut(s) | 555, 2211, 3601, 3633, 3745, 3806, 6174 |
| Hpy99I | CGWCG | 4 cut(s) | 185, 3791, 3935, 3974 |
| HpyCH4IV | ACGT | 5 cut(s) | 169, 730, 993, 1461, 4447 |
| HpySE526I | ACGT | 5 cut(s) | 169, 730, 993, 1461, 4447 |
| Hsp92I | GRCGYC | 3 cut(s) | 521, 3927, 3948 |
| HspAI | GCGC | 6 cut(s) | 123, 1903, 3452, 3800, 3927, 4173 |
| KasI | GGCGCC | 1 cut(s) | 3926 |
| KflI | GGGWCCC | 1 cut(s) | 5479 |
| KroI | GCCGGC | 1 cut(s) | 3805 |
| KroNI | GCCGGC | 1 cut(s) | 3807 |
| Ksp22I | TGATCA | 1 cut(s) | 3363 |
| KspI | CCGCGG | 1 cut(s) | 381 |
| MabI | ACCWGGT | 1 cut(s) | 2758 |
| MaeII | ACGT | 5 cut(s) | 169, 730, 993, 1461, 4447 |
| MbiI | CCGCTC | 1 cut(s) | 4910 |
| MfeI | CAATTG | 1 cut(s) | 4557 |
| MflI | RGATCY | 9 cut(s) | 1054, 1598, 2249, 2713, 3369, 4210, 4502, 4894, 5218 |
| MhlI | GDGCHC | 6 cut(s) | 736, 2200, 2851, 4222, 4619, 4963 |
| Mly113I | GGCGCC | 1 cut(s) | 3927 |
| MmeI | TCCRAC | 3 cut(s) | 1052, 1984, 4788 |
| Mph1103I | ATGCAT | 3 cut(s) | 405, 2615, 3130 |
| MreI | CGCCGGCG | 1 cut(s) | 3805 |
| MroNI | GCCGGC | 1 cut(s) | 3805 |
| MroXI | GAANNNNTTC | 6 cut(s) | 2011, 4198, 4986, 5009, 5292, 5907 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1998, 2238, 2544, 2787, 3587, 4329, 5136 |
| MspA1I | CMGCKG | 4 cut(s) | 380, 3377, 3917, 4724 |
| MspCI | CTTAAG | 1 cut(s) | 3194 |
| MspI | CCGG | 7 cut(s) | 555, 2211, 3601, 3633, 3745, 3806, 6174 |
| MunI | CAATTG | 1 cut(s) | 4557 |
| Mva1269I | GAATGC | 5 cut(s) | 455, 648, 2604, 2613, 5767 |
| MvaI | CCWGG | 9 cut(s) | 149, 1456, 2291, 2574, 2598, 2760, 4215, 4491, 6063 |
| MvnI | CGCG | 7 cut(s) | 125, 180, 380, 543, 1903, 4116, 4173 |
| NaeI | GCCGGC | 1 cut(s) | 3807 |
| NarI | GGCGCC | 1 cut(s) | 3927 |
| NciI | CCSGG | 1 cut(s) | 6175 |
| NcoI | CCATGG | 4 cut(s) | 1398, 1713, 1812, 4566 |
| NdeI | CATATG | 4 cut(s) | 1314, 1660, 2203, 4307 |
| NgoMIV | GCCGGC | 1 cut(s) | 3805 |
| NheI | GCTAGC | 1 cut(s) | 973 |
| NmeAIII | GCCGAG | 2 cut(s) | 144, 3903 |
| NsiI | ATGCAT | 3 cut(s) | 405, 2615, 3130 |
| NspI | RCATGY | 2 cut(s) | 2302, 3233 |
| NspV | TTCGAA | 1 cut(s) | 353 |
| PagI | TCATGA | 2 cut(s) | 4324, 5320 |
| PaqCI | CACCTGC | 1 cut(s) | 4083 |
| PasI | CCCWGGG | 1 cut(s) | 1455 |
| PciI | ACATGT | 1 cut(s) | 2298 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3930 |
| PctI | GAATGC | 5 cut(s) | 455, 648, 2604, 2613, 5767 |
| PdiI | GCCGGC | 1 cut(s) | 3807 |
| PdmI | GAANNNNTTC | 6 cut(s) | 2011, 4198, 4986, 5009, 5292, 5907 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2350, 6068 |
| PfoI | TCCNGGA | 1 cut(s) | 4489 |
| PluTI | GGCGCC | 1 cut(s) | 3930 |
| Ppu21I | YACGTR | 1 cut(s) | 731 |
| PpuMI | RGGWCCY | 1 cut(s) | 5479 |
| PscI | ACATGT | 1 cut(s) | 2298 |
| PshBI | ATTAAT | 1 cut(s) | 4941 |
| Psp124BI | GAGCTC | 1 cut(s) | 2851 |
| Psp5II | RGGWCCY | 1 cut(s) | 5479 |
| Psp6I | CCWGG | 9 cut(s) | 147, 1454, 2289, 2572, 2596, 2758, 4213, 4489, 6061 |
| PspFI | CCCAGC | 5 cut(s) | 1747, 3373, 3759, 4879, 6068 |
| PspGI | CCWGG | 9 cut(s) | 147, 1454, 2289, 2572, 2596, 2758, 4213, 4489, 6061 |
| PspPI | GGNCC | 5 cut(s) | 1395, 2025, 3393, 4468, 5479 |
| PspPPI | RGGWCCY | 1 cut(s) | 5479 |
| PstI | CTGCAG | 2 cut(s) | 3301, 4870 |
| PstNI | CAGNNNCTG | 2 cut(s) | 5453, 6068 |
| PsuI | RGATCY | 9 cut(s) | 1054, 1598, 2249, 2713, 3369, 4210, 4502, 4894, 5218 |
| PvuII | CAGCTG | 1 cut(s) | 4724 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1998, 2238, 2544, 2787, 3587, 4329, 5136 |
| SacI | GAGCTC | 1 cut(s) | 2851 |
| SacII | CCGCGG | 1 cut(s) | 381 |
| SalI | GTCGAC | 1 cut(s) | 3865 |
| Sau96I | GGNCC | 5 cut(s) | 1395, 2025, 3393, 4468, 5479 |
| ScaI | AGTACT | 2 cut(s) | 3823, 5969 |
| SduI | GDGCHC | 6 cut(s) | 736, 2200, 2851, 4222, 4619, 4963 |
| SexAI | ACCWGGT | 1 cut(s) | 2758 |
| SfcI | CTRYAG | 6 cut(s) | 2445, 3180, 3297, 4079, 4866, 5424 |
| SfoI | GGCGCC | 1 cut(s) | 3928 |
| Sfr303I | CCGCGG | 1 cut(s) | 381 |
| SfuI | TTCGAA | 1 cut(s) | 353 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3805 |
| SgrBI | CCGCGG | 1 cut(s) | 381 |
| SinI | GGWCC | 1 cut(s) | 5479 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1998, 2238, 2544, 2787, 3587, 4329, 5136 |
| SmlI | CTYRAG | 4 cut(s) | 263, 3194, 4004, 4962 |
| SmoI | CTYRAG | 4 cut(s) | 263, 3194, 4004, 4962 |
| SpeI | ACTAGT | 5 cut(s) | 899, 3824, 5413, 5768, 6235 |
| SspDI | GGCGCC | 1 cut(s) | 3926 |
| SspI | AATATT | 6 cut(s) | 3158, 3486, 4605, 5017, 5719, 5804 |
| SstI | GAGCTC | 1 cut(s) | 2851 |
| StyI | CCWWGG | 9 cut(s) | 1398, 1713, 1812, 2028, 2552, 3870, 4122, 4566, 5729 |
| TaiI | ACGT | 5 cut(s) | 172, 733, 996, 1464, 4450 |
| TaqII | GACCGA | 1 cut(s) | 2071 |
| TatI | WGTACW | 7 cut(s) | 313, 920, 3116, 3821, 4429, 5105, 5967 |
| TauI | GCSGC | 9 cut(s) | 76, 128, 380, 383, 3805, 3917, 4170, 4173, 5931 |
| TspGWI | ACGGA | 5 cut(s) | 2931, 4376, 4515, 5064, 5806 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2350, 6068 |
| Vha464I | CTTAAG | 1 cut(s) | 3194 |
| VpaK11BI | GGWCC | 1 cut(s) | 5479 |
| VspI | ATTAAT | 1 cut(s) | 4941 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1839 |
| XceI | RCATGY | 2 cut(s) | 2302, 3233 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2706, 4129 |
| XmaJI | CCTAGG | 1 cut(s) | 2552 |
| XmiI | GTMKAC | 2 cut(s) | 172, 3866 |
| XmnI | GAANNNNTTC | 6 cut(s) | 2011, 4198, 4986, 5009, 5292, 5907 |
| ZrmI | AGTACT | 2 cut(s) | 3823, 5969 |
| Zsp2I | ATGCAT | 3 cut(s) | 405, 2615, 3130 |