Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010299

Physical Location & Seq

Genomic Coordinates Reverse (-)

212634 .. 216584

Gene Structure 3951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g00400.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGGCTTCCAAAGTCGATCCCGAGAAGACCAAGCTCGACGAGGAGGAGACCCGAACATGCGAAATCGAAGAGGTGGCCCTGGTGGTGCCGGAGACCGACGACCCTTCACTTCCGGTGATGACATTCCGGACTTGGTTTCTAGGCATCACCTCATGCACCATCCTCATATTCCTCAACACCTTCTTCAGCTACCGCACTCAGCCTCTCATCATTTCCGCCATTCTCATGCAAATCGCTGTCTTGCCCATCGGAAAGTTCATGGCCAAAACTCTGCCAAACAAGGACTTCAATCTCATGGGCTTTAAGTTCAACTTGAACCCCGCTCCCTTCAACATGAAGGAGCATGTCGTCATCACCATCTTCGCCAATTGTGGGGTCTCCGCTGGCGGAGGTGATGCCTATTCCACCGGTGCCATCACCGTCATGAAGGCCTATTACCACCAGAGCTTGAGTTTTCTTTGCGGCCTCTTCATCGTCTTGACATCTCAGATGATTGGGTATGGATGGGCTGGATTGCTTAGGAGGTACCTGGTTGACCCCGTTGAAATGTGGTGGCCTGCAAACCTCGCTCAGGTTTCTCTGTTTAGGGCACTCCATGAGAAGGAGCATAAAGCAAAAGGCATGACACGAATGAAATTTTTCCTGATTGCCTTTGCAGCCAGCTTTTTCTATTATTTTCTCCCTGGCTATCTTTTCCCAATCTTGACATTCTTCTCATGGGTCTGCTGGGCTTGGCCACACAGCATCACTGCTCAGCAAATCGGCTCAGGTTACAAGGGACTTGGGATTGGTGCCTTCACCCTTGATTGGGCTGGCATTTCTGCTTATCACGGCAGCCCCCTTGTCACACCTTGGATTTCCATTGTCAATGTCGGAGTTGGTTTTATCATCTTCATCTACATAATTCTCCCTCTGTGCTACTGGAAGTATGACACTTTTGATGCTCGAAAGTTCCCTATATTTTCCAACCAGCTGTTCACCAATAAAGGCCTTAAATATGACACTACCAAGATCACAACGCCACAATTAGAGCTTGACATTGCAGCTTATGATAATTATGGGAAGCTCTATCTTAGCCCTCTGTTCGCTTTGTCCATTGGATCAGGATTTGCAAGATTTTCAGCGACCCTCATTCACGTGGCACTTTTTCATGGCGGTGCTATTTTGAAGCAAAGCAAATCAGCAGTGAATAATGCAAAAATGGATATCCATGAAAAACTGATGCAAAGCTACAAGCATGTGCCTGAATGGTGGTTCCTCATCATACTATTTTTTAGCGTTGCCCTCTCCCTGCTCATGTCTTTTTTATGGAGAGAAAGTGTGCAGCTGCCGTGGTGGGGAATGATCTTCGCATTTATTTTGTCTTTCATTGTCACCCTCCCAGTTGGGGTCATTCAGGCAACTACCAACCAACAACCTGGATTCGACATTATAGCACAGTTCATGATTGGTTATGTGCTCCCAGGAAAACCTATAGCAAACCTGCTTTTCAAAATATATGGAAGAATCAGCACTGTCCATGCGCTCTCTTTCTTGTCTGACCTTAAACTCGGGGTCTATATGAAGATTCCGCCTCGGTGCATGTACACAGCTCAGTTGGTGGGAACTCTGGTTTCTGGTATTGTGAACCTTGCAGTTGCTTGGTGGATGTTGGAGGGCATTCAGAACATATGTGACACTGATGTACTCCCCCCTGACAGTCCATGGACTTGTCCTAAATACAGAGTCACCTTTGATGCTTCTGTTATATGGGGCCTGATTGGACCAAGGCGACTGTTTGGACCTGGAGGACTGTATAGGAACTTAGTATGGCTATTTCTCGTCGGAGCCCTCTTGCCGGTTCCTATTTATGTTCTGAGCAAAATCTTCCCTGACAAGAAATGGATTCCGCTGATCAACATGCCGGTCATTCTTTACGGTTTTGCTGGCATGCCACCGGCAACTCCCACCAACATAGCAAGCTGGCTCATTACTGGAGCTATCTTCAACTATTTCCTCTTCCGATACCACAAGCGCTGGTGGCAGAAGTACAACTATGTTCTATCTGCAGCATTGGATGCCGGCACAGCTTTCATGGGTGTCCTAATCTTCTTTGCGCTGCAGAACAACAACATTCTTGTTCATTGGTGGGGGAGTGAACTTGATCATTGCCCTTTGGCATCATGCCCTACTGCACCGGGCATTACAGTCAAAGGCTGTCCTGTTTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006873 GO:0006875 GO:0008150 GO:0008324 GO:0009506 GO:0009987 GO:0010232 GO:0010233 GO:0015075 GO:0015318 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030054 GO:0032501 GO:0034220 GO:0042592 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0098655 GO:0098771 GO:1990388

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

737

Amino Acids

82.94

Weight (kDa)

9.0

Isoelectric Point (pI)

35.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	40 - 699	3.4e-170	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16370
fragaria_vesca	FvH4_3g00400 FvH4_3g00400
malus_domestica	MD00G1163400.v1.1 MD05G1360700.v1.1 MD08G1191400.v1.1
prunus_persica	Prupe.4G004600_v2.0.a1 Prupe.4G004600_v2.0.a1
pyrus_communis	pycom05g32750 pycom08g16500 pycom10g28800
rosa_chinensis	RchiOBHm_Chr5g0000601
rosa_laevigata	RLG00000030879
rosa_multiflora	Rmu_sc0003699.1_g000006
rosa_roxburghii	Rroxscaffold_1G00075610
rosa_rugosa	Rorug04G0385400
rosa_samantha	Rh5AG005000 Rh5BG006500 Rh5CG005400 Rh5DG005300
rosa_wichuraiana	Rw5G000490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1491
Acc65I	GGTACC	1 cut(s)	525
AccB1I	GGYRCC	4 cut(s)	85, 410, 525, 791
AccBSI	CCGCTC	1 cut(s)	323
AccIII	TCCGGA	1 cut(s)	126
AciI	CCGC	9 cut(s)	193, 216, 321, 381, 387, 462, 1155, 1571, 1889
AclWI	GGATC	2 cut(s)	11, 1108
AcoI	YGGCCR	2 cut(s)	261, 734
AcsI	RAATTY	1 cut(s)	635
AcuI	CTGAAG	1 cut(s)	169
AcvI	CACGTG	1 cut(s)	1138
AfaI	GTAC	4 cut(s)	527, 1586, 1686, 2030
AfeI	AGCGCT	1 cut(s)	2015
AfiI	CCNNNNNNNGG	8 cut(s)	372, 571, 601, 807, 808, 1337, 1387, 1837
AgeI	ACCGGT	1 cut(s)	407
AgsI	TTSAA	8 cut(s)	289, 310, 316, 331, 545, 1168, 1492, 1987
AjnI	CCWGG	6 cut(s)	78, 528, 682, 1417, 1462, 1783
AjuI	GAANNNNNNNTTGG	2 cut(s)	959, 991
Alw21I	GWGCWC	1 cut(s)	1461
Alw26I	GTCTC	3 cut(s)	41, 86, 382
AlwI	GGATC	2 cut(s)	11, 1108
Ama87I	CYCGRG	2 cut(s)	20, 1550
Aor13HI	TCCGGA	1 cut(s)	126
Aor51HI	AGCGCT	1 cut(s)	2015
AoxI	GGCC	8 cut(s)	75, 261, 429, 463, 554, 734, 988, 1753
ApeKI	GCWGC	7 cut(s)	656, 834, 1043, 1324, 1327, 2048, 2098
ApoI	RAATTY	1 cut(s)	635
AsiGI	ACCGGT	1 cut(s)	407
Asp700I	GAANNNNTTC	1 cut(s)	638
Asp718I	GGTACC	1 cut(s)	525
AspLEI	GCGC	3 cut(s)	1525, 2016, 2098
AspS9I	GGNCC	4 cut(s)	76, 1753, 1763, 1781
AsuC2I	CCSGG	1 cut(s)	2178
AsuHPI	GGTGA	9 cut(s)	127, 139, 346, 404, 409, 790, 970, 1366, 1720
AvaI	CYCGRG	2 cut(s)	20, 1550
AvaII	GGWCC	2 cut(s)	1763, 1781
BaeGI	GKGCMC	1 cut(s)	592
BalI	TGGCCA	2 cut(s)	263, 736
BanI	GGYRCC	4 cut(s)	85, 410, 525, 791
BanII	GRGCYC	1 cut(s)	1831
BarI	GAAGNNNNNNTAC	2 cut(s)	419, 451
BbrPI	CACGTG	1 cut(s)	1138
BbsI	GAAGAC	1 cut(s)	32
Bbv12I	GWGCWC	1 cut(s)	1461
BbvI	GCAGC	7 cut(s)	668, 846, 1055, 1314, 1336, 2060, 2085
BccI	CCATC	5 cut(s)	167, 254, 365, 422, 498
BceAI	ACGGC	2 cut(s)	847, 1315
BciT130I	CCWGG	6 cut(s)	80, 530, 684, 1419, 1464, 1785
BclI	TGATCA	2 cut(s)	1893, 2143
BcnI	CCSGG	1 cut(s)	2178
BcoDI	GTCTC	3 cut(s)	41, 86, 382
BfaI	CTAG	1 cut(s)	140
BfmI	CTRYAG	3 cut(s)	1473, 2046, 2099
BfoI	RGCGCY	1 cut(s)	2017
BfuAI	ACCTGC	1 cut(s)	1491
BisI	GCNGC	8 cut(s)	463, 657, 835, 1044, 1325, 1328, 2049, 2099
BlpI	GCTNAGC	1 cut(s)	753
BlsI	GCNGC	8 cut(s)	464, 658, 836, 1045, 1326, 1329, 2050, 2100
Bme1390I	CCNGG	7 cut(s)	80, 530, 684, 1419, 1464, 1785, 2178
Bme18I	GGWCC	2 cut(s)	1763, 1781
BmeT110I	CYCGRG	2 cut(s)	20, 1550
BmgT120I	GGNCC	4 cut(s)	76, 1753, 1763, 1781
BmiI	GGNNCC	8 cut(s)	87, 412, 527, 793, 1256, 1754, 1828, 1842
BmrFI	CCNGG	7 cut(s)	80, 530, 684, 1419, 1464, 1785, 2178
BmrI	ACTGGG	1 cut(s)	1376
BmsI	GCATC	8 cut(s)	153, 385, 753, 931, 1212, 1726, 2047, 2168
BmuI	ACTGGG	1 cut(s)	1376
BpiI	GAAGAC	1 cut(s)	32
BpmI	CTGGAG	2 cut(s)	1806, 1995
Bpu10I	CCTNAGC	3 cut(s)	518, 570, 766
Bpu1102I	GCTNAGC	1 cut(s)	753
BpuEI	CTTGAG	1 cut(s)	469
BpuMI	CCSGG	1 cut(s)	2178
BsaAI	YACGTR	1 cut(s)	1138
BsaI	GGTCTC	3 cut(s)	41, 86, 382
BsaJI	CCNNGG	8 cut(s)	78, 682, 851, 1331, 1462, 1574, 1703, 1766
BsaWI	WCCGGW	3 cut(s)	112, 126, 407
BsaXI	ACNNNNNCTCC	2 cut(s)	1303, 1333
Bsc4I	CCNNNNNNNGG	8 cut(s)	372, 571, 601, 807, 808, 1337, 1387, 1837
Bse118I	RCCGGY	5 cut(s)	407, 1837, 1903, 1936, 2060
Bse1I	ACTGG	3 cut(s)	926, 1382, 1978
Bse3DI	GCAATG	2 cut(s)	1038, 2146
BseAI	TCCGGA	1 cut(s)	126
BseBI	CCWGG	6 cut(s)	80, 530, 684, 1419, 1464, 1785
BseDI	CCNNGG	8 cut(s)	78, 682, 851, 1331, 1462, 1574, 1703, 1766
BseGI	GGATG	4 cut(s)	159, 509, 1653, 2062
BseLI	CCNNNNNNNGG	8 cut(s)	372, 571, 601, 807, 808, 1337, 1387, 1837
BseMI	GCAATG	2 cut(s)	1038, 2146
BseMII	CTCAG	7 cut(s)	212, 500, 584, 767, 780, 1607, 1847
BseNI	ACTGG	3 cut(s)	926, 1382, 1978
BseRI	GAGGAG	2 cut(s)	56, 59
BseSI	GKGCMC	1 cut(s)	592
BseXI	GCAGC	7 cut(s)	668, 846, 1055, 1314, 1336, 2060, 2085
BseYI	CCCAGC	1 cut(s)	726
BsgI	GTGCAG	2 cut(s)	1343, 2157
BshFI	GGCC	8 cut(s)	77, 263, 431, 465, 556, 736, 990, 1755
BshNI	GGYRCC	4 cut(s)	85, 410, 525, 791
BshTI	ACCGGT	1 cut(s)	407
BsiHKAI	GWGCWC	1 cut(s)	1461
BsiHKCI	CYCGRG	2 cut(s)	20, 1550
BsiSI	CCGG	9 cut(s)	89, 113, 127, 408, 1838, 1904, 1937, 2061, 2177
BslFI	GGGAC	1 cut(s)	792
BslI	CCNNNNNNNGG	8 cut(s)	372, 571, 601, 807, 808, 1337, 1387, 1837
BsmAI	GTCTC	3 cut(s)	41, 86, 382
BsmFI	GGGAC	1 cut(s)	792
BsmI	GAATGC	1 cut(s)	1659
BsnI	GGCC	8 cut(s)	77, 263, 431, 465, 556, 736, 990, 1755
Bso31I	GGTCTC	3 cut(s)	41, 86, 382
BsoBI	CYCGRG	2 cut(s)	20, 1550
Bsp1286I	GDGCHC	3 cut(s)	592, 1461, 1831
Bsp13I	TCCGGA	1 cut(s)	126
Bsp1407I	TGTACA	1 cut(s)	1584
Bsp143I	GATC	6 cut(s)	16, 1011, 1100, 1344, 1893, 2143
Bsp1720I	GCTNAGC	1 cut(s)	753
Bsp19I	CCATGG	1 cut(s)	1703
BspACI	CCGC	9 cut(s)	193, 216, 321, 381, 387, 462, 1155, 1571, 1889
BspANI	GGCC	8 cut(s)	77, 263, 431, 465, 556, 736, 990, 1755
BspCNI	CTCAG	7 cut(s)	211, 499, 583, 766, 779, 1606, 1848
BspEI	TCCGGA	1 cut(s)	126
BspHI	TCATGA	2 cut(s)	423, 1443
BspLI	GGNNCC	8 cut(s)	87, 412, 527, 793, 1256, 1754, 1828, 1842
BspMAI	CTGCAG	2 cut(s)	2050, 2103
BspMI	ACCTGC	1 cut(s)	1491
BspPI	GGATC	2 cut(s)	11, 1108
BspT107I	GGYRCC	4 cut(s)	85, 410, 525, 791
BspTNI	GGTCTC	3 cut(s)	41, 86, 382
BsrBI	CCGCTC	1 cut(s)	323
BsrDI	GCAATG	2 cut(s)	1038, 2146
BsrFI	RCCGGY	5 cut(s)	407, 1837, 1903, 1936, 2060
BsrGI	TGTACA	1 cut(s)	1584
BsrI	ACTGG	3 cut(s)	926, 1382, 1978
BssAI	RCCGGY	5 cut(s)	407, 1837, 1903, 1936, 2060
BssECI	CCNNGG	8 cut(s)	78, 682, 851, 1331, 1462, 1574, 1703, 1766
BssMI	GATC	6 cut(s)	16, 1011, 1100, 1344, 1893, 2143
BssT1I	CCWWGG	3 cut(s)	851, 1703, 1766
Bst2UI	CCWGG	6 cut(s)	80, 530, 684, 1419, 1464, 1785
Bst4CI	ACNGT	8 cut(s)	421, 1440, 1516, 1700, 1776, 1794, 1919, 2188
Bst6I	CTCTTC	3 cut(s)	63, 473, 2003
BstAPI	GCANNNNNTGC	1 cut(s)	2057
BstAUI	TGTACA	1 cut(s)	1584
BstBAI	YACGTR	1 cut(s)	1138
BstC8I	GCNNGC	9 cut(s)	385, 558, 661, 814, 1927, 1931, 1960, 1964, 2062
BstDSI	CCRYGG	2 cut(s)	1331, 1703
BstENI	CCTNNNNNAGG	1 cut(s)	569
BstF5I	GGATG	4 cut(s)	159, 509, 1653, 2062
BstH2I	RGCGCY	1 cut(s)	2017
BstHHI	GCGC	3 cut(s)	1525, 2016, 2098
BstKTI	GATC	6 cut(s)	19, 1014, 1103, 1347, 1896, 2146
BstMAI	GTCTC	3 cut(s)	41, 86, 382
BstMBI	GATC	6 cut(s)	16, 1011, 1100, 1344, 1893, 2143
BstMWI	GCNNNNNNNGC	5 cut(s)	566, 656, 2020, 2057, 2066
BstNI	CCWGG	6 cut(s)	80, 530, 684, 1419, 1464, 1785
BstNSI	RCATGY	6 cut(s)	60, 347, 1241, 1585, 1903, 1933
BstSCI	CCNGG	7 cut(s)	78, 528, 682, 1417, 1462, 1783, 2176
BstSFI	CTRYAG	3 cut(s)	1473, 2046, 2099
BstSLI	GKGCMC	1 cut(s)	592
BstV1I	GCAGC	7 cut(s)	668, 846, 1055, 1314, 1336, 2060, 2085
BstV2I	GAAGAC	1 cut(s)	32
BstXI	CCANNNNNNTGG	1 cut(s)	1418
BsuRI	GGCC	8 cut(s)	77, 263, 431, 465, 556, 736, 990, 1755
BtgI	CCRYGG	2 cut(s)	1331, 1703
BtsCI	GGATG	4 cut(s)	159, 509, 1653, 2062
BtsI	GCAGTG	2 cut(s)	747, 1191
BtsIMutI	CAGTG	4 cut(s)	747, 1191, 1512, 1677
BveI	ACCTGC	1 cut(s)	1491
Cac8I	GCNNGC	9 cut(s)	385, 558, 661, 814, 1927, 1931, 1960, 1964, 2062
CciI	TCATGA	2 cut(s)	423, 1443
CfoI	GCGC	3 cut(s)	1525, 2016, 2098
Cfr10I	RCCGGY	5 cut(s)	407, 1837, 1903, 1936, 2060
Cfr13I	GGNCC	4 cut(s)	76, 1753, 1763, 1781
CsiI	ACCWGGT	1 cut(s)	528
Csp6I	GTAC	4 cut(s)	526, 1585, 1685, 2029
CspAI	ACCGGT	1 cut(s)	407
CviQI	GTAC	4 cut(s)	526, 1585, 1685, 2029
DpnI	GATC	6 cut(s)	18, 1013, 1102, 1346, 1895, 2145
DpnII	GATC	6 cut(s)	16, 1011, 1100, 1344, 1893, 2143
EaeI	YGGCCR	2 cut(s)	261, 734
Eam1104I	CTCTTC	3 cut(s)	63, 473, 2003
EarI	CTCTTC	3 cut(s)	63, 473, 2003
EciI	GGCGGA	3 cut(s)	205, 402, 1560
Eco130I	CCWWGG	3 cut(s)	851, 1703, 1766
Eco147I	AGGCCT	2 cut(s)	431, 990
Eco24I	GRGCYC	1 cut(s)	1831
Eco31I	GGTCTC	3 cut(s)	41, 86, 382
Eco32I	GATATC	1 cut(s)	1207
Eco47I	GGWCC	2 cut(s)	1763, 1781
Eco47III	AGCGCT	1 cut(s)	2015
Eco57I	CTGAAG	1 cut(s)	169
Eco72I	CACGTG	1 cut(s)	1138
Eco88I	CYCGRG	2 cut(s)	20, 1550
EcoNI	CCTNNNNNAGG	1 cut(s)	569
EcoO109I	RGGNCCY	1 cut(s)	1753
EcoRII	CCWGG	6 cut(s)	78, 528, 682, 1417, 1462, 1783
EcoRV	GATATC	1 cut(s)	1207
EcoT14I	CCWWGG	3 cut(s)	851, 1703, 1766
EcoT38I	GRGCYC	1 cut(s)	1831
ErhI	CCWWGG	3 cut(s)	851, 1703, 1766
FalI	AAGNNNNNCTT	2 cut(s)	296, 328
FaqI	GGGAC	1 cut(s)	792
FauI	CCCGC	1 cut(s)	328
FauNDI	CATATG	1 cut(s)	1670
FbaI	TGATCA	2 cut(s)	1893, 2143
Fnu4HI	GCNGC	8 cut(s)	463, 657, 835, 1044, 1325, 1328, 2049, 2099
FokI	GGATG	4 cut(s)	146, 516, 1660, 2069
FriOI	GRGCYC	1 cut(s)	1831
Fsp4HI	GCNGC	8 cut(s)	463, 657, 835, 1044, 1325, 1328, 2049, 2099
FspBI	CTAG	1 cut(s)	140
GlaI	GCGC	3 cut(s)	1524, 2015, 2097
GluI	GCNGC	8 cut(s)	463, 657, 835, 1044, 1325, 1328, 2049, 2099
GsaI	CCCAGC	1 cut(s)	730
GsuI	CTGGAG	2 cut(s)	1806, 1995
HaeII	RGCGCY	1 cut(s)	2017
HaeIII	GGCC	8 cut(s)	77, 263, 431, 465, 556, 736, 990, 1755
HapII	CCGG	9 cut(s)	89, 113, 127, 408, 1838, 1904, 1937, 2061, 2177
HhaI	GCGC	3 cut(s)	1525, 2016, 2098
Hin6I	GCGC	3 cut(s)	1523, 2014, 2096
HinP1I	GCGC	3 cut(s)	1523, 2014, 2096
HincII	GTYRAC	1 cut(s)	535
HindII	GTYRAC	1 cut(s)	535
HinfI	GANTC	5 cut(s)	1422, 1506, 1567, 1725, 1885
HpaII	CCGG	9 cut(s)	89, 113, 127, 408, 1838, 1904, 1937, 2061, 2177
HphI	GGTGA	9 cut(s)	127, 139, 346, 404, 409, 790, 970, 1366, 1720
Hpy166II	GTNNAC	5 cut(s)	535, 978, 1587, 1627, 2138
Hpy188I	TCNGA	8 cut(s)	251, 489, 875, 1540, 1665, 1826, 1857, 2003
Hpy188III	TCNNGA	8 cut(s)	20, 127, 424, 478, 643, 703, 1104, 1444
Hpy8I	GTNNAC	5 cut(s)	535, 978, 1587, 1627, 2138
Hpy99I	CGWCG	3 cut(s)	41, 101, 1826
HpyAV	CCTTC	7 cut(s)	114, 190, 331, 337, 421, 595, 805
HpyCH4III	ACNGT	8 cut(s)	421, 1440, 1516, 1700, 1776, 1794, 1919, 2188
HpyCH4IV	ACGT	1 cut(s)	1137
HpyF10VI	GCNNNNNNNGC	5 cut(s)	566, 656, 2020, 2057, 2066
HpySE526I	ACGT	1 cut(s)	1137
HspAI	GCGC	3 cut(s)	1523, 2014, 2096
Kpn2I	TCCGGA	1 cut(s)	126
KpnI	GGTACC	1 cut(s)	529
KroI	GCCGGC	1 cut(s)	2060
KroNI	GCCGGC	1 cut(s)	2062
Ksp22I	TGATCA	2 cut(s)	1893, 2143
Kzo9I	GATC	6 cut(s)	16, 1011, 1100, 1344, 1893, 2143
LmnI	GCTCC	6 cut(s)	328, 340, 604, 1464, 1826, 1976
Lsp1109I	GCAGC	7 cut(s)	668, 846, 1055, 1314, 1336, 2060, 2085
LweI	GCATC	8 cut(s)	153, 385, 753, 931, 1212, 1726, 2047, 2168
MabI	ACCWGGT	1 cut(s)	528
MaeI	CTAG	1 cut(s)	140
MaeII	ACGT	1 cut(s)	1137
MaeIII	GTNAC	5 cut(s)	770, 844, 1372, 1673, 1726
MalI	GATC	6 cut(s)	18, 1013, 1102, 1346, 1895, 2145
MbiI	CCGCTC	1 cut(s)	323
MboI	GATC	6 cut(s)	16, 1011, 1100, 1344, 1893, 2143
MfeI	CAATTG	1 cut(s)	367
MhlI	GDGCHC	3 cut(s)	592, 1461, 1831
MlsI	TGGCCA	2 cut(s)	263, 736
MluCI	AATT	5 cut(s)	367, 635, 903, 1025, 1054
MluNI	TGGCCA	2 cut(s)	263, 736
MlyI	GAGTC	1 cut(s)	1734
MmeI	TCCRAC	4 cut(s)	853, 990, 1632, 1804
Mox20I	TGGCCA	2 cut(s)	263, 736
MroI	TCCGGA	1 cut(s)	126
MroNI	GCCGGC	1 cut(s)	2060
MroXI	GAANNNNTTC	1 cut(s)	638
MscI	TGGCCA	2 cut(s)	263, 736
MseI	TTAA	3 cut(s)	303, 993, 1545
MslI	CAYNNNNRTG	4 cut(s)	224, 422, 1136, 1155
Msp20I	TGGCCA	2 cut(s)	263, 736
MspA1I	CMGCKG	4 cut(s)	383, 973, 1327, 1891
MspI	CCGG	9 cut(s)	89, 113, 127, 408, 1838, 1904, 1937, 2061, 2177
MspR9I	CCNGG	7 cut(s)	80, 530, 684, 1419, 1464, 1785, 2178
MunI	CAATTG	1 cut(s)	367
Mva1269I	GAATGC	1 cut(s)	1659
MvaI	CCWGG	6 cut(s)	80, 530, 684, 1419, 1464, 1785
MwoI	GCNNNNNNNGC	5 cut(s)	566, 656, 2020, 2057, 2066
NaeI	GCCGGC	1 cut(s)	2062
NciI	CCSGG	1 cut(s)	2178
NcoI	CCATGG	1 cut(s)	1703
NdeI	CATATG	1 cut(s)	1670
NdeII	GATC	6 cut(s)	16, 1011, 1100, 1344, 1893, 2143
NgoMIV	GCCGGC	1 cut(s)	2060
NlaIV	GGNNCC	8 cut(s)	87, 412, 527, 793, 1256, 1754, 1828, 1842
NmuCI	GTSAC	4 cut(s)	844, 1372, 1673, 1726
NspI	RCATGY	6 cut(s)	60, 347, 1241, 1585, 1903, 1933
PaeI	GCATGC	1 cut(s)	1933
PagI	TCATGA	2 cut(s)	423, 1443
PceI	AGGCCT	2 cut(s)	431, 990
PctI	GAATGC	1 cut(s)	1659
PdiI	GCCGGC	1 cut(s)	2062
PdmI	GAANNNNTTC	1 cut(s)	638
PfeI	GAWTC	4 cut(s)	1422, 1506, 1567, 1885
PinAI	ACCGGT	1 cut(s)	407
PkrI	GCNGC	8 cut(s)	464, 658, 836, 1045, 1326, 1329, 2050, 2100
PleI	GAGTC	1 cut(s)	1733
PmaCI	CACGTG	1 cut(s)	1138
PmlI	CACGTG	1 cut(s)	1138
PpsI	GAGTC	1 cut(s)	1733
Ppu21I	YACGTR	1 cut(s)	1138
Psp6I	CCWGG	6 cut(s)	78, 528, 682, 1417, 1462, 1783
PspCI	CACGTG	1 cut(s)	1138
PspFI	CCCAGC	1 cut(s)	726
PspGI	CCWGG	6 cut(s)	78, 528, 682, 1417, 1462, 1783
PspN4I	GGNNCC	8 cut(s)	87, 412, 527, 793, 1256, 1754, 1828, 1842
PspPI	GGNCC	4 cut(s)	76, 1753, 1763, 1781
PstI	CTGCAG	2 cut(s)	2050, 2103
PvuII	CAGCTG	2 cut(s)	973, 1327
RsaI	GTAC	4 cut(s)	527, 1586, 1686, 2030
RsaNI	GTAC	4 cut(s)	526, 1585, 1685, 2029
RseI	CAYNNNNRTG	4 cut(s)	224, 422, 1136, 1155
SaqAI	TTAA	3 cut(s)	303, 993, 1545
SatI	GCNGC	8 cut(s)	463, 657, 835, 1044, 1325, 1328, 2049, 2099
Sau3AI	GATC	6 cut(s)	16, 1011, 1100, 1344, 1893, 2143
Sau96I	GGNCC	4 cut(s)	76, 1753, 1763, 1781
SchI	GAGTC	1 cut(s)	1734
ScrFI	CCNGG	7 cut(s)	80, 530, 684, 1419, 1464, 1785, 2178
SduI	GDGCHC	3 cut(s)	592, 1461, 1831
SexAI	ACCWGGT	1 cut(s)	528
SfaNI	GCATC	8 cut(s)	153, 385, 753, 931, 1212, 1726, 2047, 2168
SfcI	CTRYAG	3 cut(s)	1473, 2046, 2099
SgrAI	CRCCGGYG	1 cut(s)	407
SinI	GGWCC	2 cut(s)	1763, 1781
SmiMI	CAYNNNNRTG	4 cut(s)	224, 422, 1136, 1155
SmlI	CTYRAG	1 cut(s)	448
SmoI	CTYRAG	1 cut(s)	448
SphI	GCATGC	1 cut(s)	1933
Sse9I	AATT	5 cut(s)	367, 635, 903, 1025, 1054
SseBI	AGGCCT	2 cut(s)	431, 990
SsiI	CCGC	9 cut(s)	193, 216, 321, 381, 387, 462, 1155, 1571, 1889
SspMI	CTAG	1 cut(s)	140
StuI	AGGCCT	2 cut(s)	431, 990
StyD4I	CCNGG	7 cut(s)	78, 528, 682, 1417, 1462, 1783, 2176
StyI	CCWWGG	3 cut(s)	851, 1703, 1766
TaaI	ACNGT	8 cut(s)	421, 1440, 1516, 1700, 1776, 1794, 1919, 2188
TaiI	ACGT	1 cut(s)	1140
TaqI	TCGA	5 cut(s)	15, 36, 66, 946, 1425
TaqII	GACCGA	1 cut(s)	110
TasI	AATT	5 cut(s)	367, 635, 903, 1025, 1054
TatI	WGTACW	3 cut(s)	1584, 1684, 2028
TauI	GCSGC	1 cut(s)	465
TfiI	GAWTC	4 cut(s)	1422, 1506, 1567, 1885
Tru1I	TTAA	3 cut(s)	303, 993, 1545
Tru9I	TTAA	3 cut(s)	303, 993, 1545
TscAI	CASTG	4 cut(s)	754, 1191, 1519, 1684
TseFI	GTSAC	4 cut(s)	844, 1372, 1673, 1726
TseI	GCWGC	7 cut(s)	656, 834, 1043, 1324, 1327, 2048, 2098
Tsp45I	GTSAC	4 cut(s)	844, 1372, 1673, 1726
TspRI	CASTG	4 cut(s)	754, 1191, 1519, 1684
VpaK11BI	GGWCC	2 cut(s)	1763, 1781
XagI	CCTNNNNNAGG	1 cut(s)	569
XapI	RAATTY	1 cut(s)	635
XceI	RCATGY	6 cut(s)	60, 347, 1241, 1585, 1903, 1933
XmnI	GAANNNNTTC	1 cut(s)	638
XspI	CTAG	1 cut(s)	140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.