Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010299

Physical Location & Seq

Genomic Coordinates Reverse (-)

338096 .. 342029

Gene Structure 3934 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28213

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGGCGTCGAAAGTCGATCCCGAGAAGACCAAAGGCGCTGACTCCGAGGAGACCCGAACATGCGAAATCGAAGAGGTGGCGCTGGTGGTGCCGGAGACCGACGATCCTTCACTGCCGGTGATGACATTCCGGACTTGGTTCCTGGGCATCACCTCATGCACCATCCTCATATTCCTCAACACCTTTTTCAGCTACCGCACTCAGCCTCTCGCCATTTCCGCCATTCTCATGCAAATCGCTGTCTTGCCCGTCGGAAAGTTCATGGCCAAAACTCTGCCCAACAAGGACTTCAATCTGATGGGCTTTAAGTTCAACCTGAATCCTGGGCCCTTCAACATGAAGGAGCATGTCGTCATCACCATTTTCGCCAATTGTGGGTTCTCAGCTGGCGGAGGTGATGCCTACTCCACCGGTGCCATCACCGTTATGAAGGCCTATTACCACCAGAGCTTGAGTTTTCTTTGTGGCCTCTTCATCGTCTTGACCTCTCAGATGATTGGATATGGATGGGCTGGATTGCTGAGGAGGTACCTGGTTGACCCCGTTGAAATGTGGTGGCCTGCAAATGTTGCTCAGGTTTCTCTGTTTAGGGCACTCCATGAGAAGGAGCATAAAGCCAAAGGCATGACACGGATGAAATTTTTCCTGTTTGCCTTTGCAGCAAGCTTTTTCTATTATTTGTTCCCTGGCTATCTTTTCCAAATCTTGTCATTCTTCTCATGGGTCTGCTGGGCTTGGCCACACAGTATCACTGCTCAGCAAATCGGCTCAGGTGCCAAGGGACTTGGGATTGGTGCCTTCACCCTCGATTGGGCTGGCATTTCAGCTTATCACGGCAACCCCCTCGTCACACCTTGGGTTTCCATTCTCAATGTCGGAGTTGGTTTTTTCATGTTCATCTACATAATTCTCCCTCTATGCTACTGGAAGTATGACACTTTTGATGCTCGAAAGTTTCCTATATTTTCCAACCAGCTATTCACCAATAAAGGCCTTAAATATGACACTACCAAGATCACGACACCACAATTAGAGCTTGACATTGCAGCTTATGATAATTATGGGAAGCTCTATCTTAGCCCTCTTTTCGCTTTATCCATTGGATCAGGATTTGCAAGATTTTCAGCAACCCTTATTCACGTGGCACTCTTTCATGGCGGTGCTATTTTGAAGCAAAGCAAATCAGCAGTGAATAATGCAAAAATGGATATCCATGAAAAATTGATGCAAAGCTACAAGCACGTGCCTGAATGGTGGTTCCTCATCATACTCTTTTTTAGCATTGCCCTCTCCCTGCTGATGTCTTTTGTATGGAGAGAAACTGTGCAGCTGGCATGGTGGGGAATGATCTTCGCATTTGTTTTGTCTTTCATTGTCACTCTCCCAGTTGGGGTCATTCAAGCAACCACCAACCAACAACCTGGATTTGACATTATAGCACAGTTCATGATTGGTTATGTGCTCCCAGGAAAACCCATAGCAAACCTGCTTTTCAAAATCTATGGAAGAATCAGCACTGTCCATGCTCTCTCTTTCTTGTCTGACCTTAAACTCGGGGTCTATATGAAGATTCCACCTCGGTGCATGTACACAGCTCAGCTGGTGGGAACTCTGGTTTCTGGTGTTGTGAACCTTGCAGTTGCATGGTGGATGTTGGAGGGCATTCAGAACATATGCGACACTGAAGTACTCCCCCCAGACAGTCCATGGACTTGTCCTAAATACAGAGTCACCTTTGATGCTTCTGTTATATGGGGCCTGATTGGACCAAGGAGACTGTTTGGACCTGGAGGACTGTATAGGAACTTGGTATGGCTATTTCTTGTTGGAGCTATCTTGCCAGTTCCTATTTGGGTGTTGAGCAAAATCTTCCCCGACAAGAAATGGATTCCGCTGATCAACATGCCAGTCATTCTTTACGGCTTTGCTGGGTTGCCACCAGCAACTCCCACCAACATAGCGAGCTGGCTCATCACTGGAGCTATCTTCAATTACTTCATCTTCAAATACCACAAGCGTTGGTGGCAGAAGTACAACTATGTTCTATCTGCAGCATTGGATGCCGGGACAGCTTTCATGGGTGTCTTACTCTTCTTTGCGTTGCAGAACAACAACATTCTTGTCCATTGGTGGGGGAGTGAAGCTGATCATTGCCCTTTGGCATCATGCCCTACTGCACCAGGCATTATTGTCAAAGGATGTCCGGTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006873 GO:0006875 GO:0008150 GO:0008324 GO:0009506 GO:0009987 GO:0010232 GO:0010233 GO:0015075 GO:0015318 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030054 GO:0032501 GO:0034220 GO:0042592 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0098655 GO:0098771 GO:1990388

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

737

Amino Acids

82.84

Weight (kDa)

9.05

Isoelectric Point (pI)

32.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	41 - 700	3.1e-169	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16370
fragaria_vesca	FvH4_3g00400 FvH4_3g00400
malus_domestica	MD00G1163400.v1.1 MD05G1360700.v1.1 MD08G1191400.v1.1
prunus_persica	Prupe.4G004600_v2.0.a1 Prupe.4G004600_v2.0.a1
pyrus_communis	pycom05g32750 pycom08g16500 pycom10g28800
rosa_chinensis	RchiOBHm_Chr5g0000601
rosa_laevigata	RLG00000030879
rosa_multiflora	Rmu_sc0003699.1_g000006
rosa_roxburghii	Rroxscaffold_1G00075610
rosa_rugosa	Rorug04G0385400
rosa_samantha	Rh5AG005000 Rh5BG006500 Rh5CG005400 Rh5DG005300
rosa_wichuraiana	Rw5G000490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1494
Acc65I	GGTACC	1 cut(s)	528
AccB1I	GGYRCC	5 cut(s)	88, 413, 528, 773, 794
AccIII	TCCGGA	1 cut(s)	129
AciI	CCGC	5 cut(s)	196, 219, 390, 1158, 1892
AclWI	GGATC	3 cut(s)	11, 98, 1111
AcoI	YGGCCR	2 cut(s)	264, 737
AcsI	RAATTY	1 cut(s)	638
AcuI	CTGAAG	1 cut(s)	1704
AcvI	CACGTG	2 cut(s)	1141, 1243
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	4 cut(s)	530, 1589, 1689, 2033
AfiI	CCNNNNNNNGG	6 cut(s)	375, 604, 810, 811, 1390, 2131
AgeI	ACCGGT	1 cut(s)	410
AgsI	TTSAA	9 cut(s)	292, 313, 334, 548, 1171, 1400, 1495, 1990, 2005
AjnI	CCWGG	8 cut(s)	141, 322, 531, 685, 1420, 1465, 1786, 2179
AjuI	GAANNNNNNNTTGG	6 cut(s)	272, 304, 362, 394, 962, 994
AleI	CACNNNNGTG	1 cut(s)	1579
Alw21I	GWGCWC	1 cut(s)	1464
Alw26I	GTCTC	3 cut(s)	44, 89, 1768
AlwI	GGATC	3 cut(s)	11, 98, 1111
Ama87I	CYCGRG	2 cut(s)	20, 1553
Aor13HI	TCCGGA	1 cut(s)	129
AoxI	GGCC	8 cut(s)	264, 326, 432, 466, 557, 737, 991, 1756
ApaI	GGGCCC	1 cut(s)	330
ApeKI	GCWGC	4 cut(s)	659, 1046, 1327, 2051
ApoI	RAATTY	1 cut(s)	638
AsiGI	ACCGGT	1 cut(s)	410
Asp700I	GAANNNNTTC	1 cut(s)	641
Asp718I	GGTACC	1 cut(s)	528
AspLEI	GCGC	2 cut(s)	38, 82
AspS9I	GGNCC	5 cut(s)	326, 327, 1756, 1766, 1784
AsuC2I	CCSGG	1 cut(s)	2065
AsuHPI	GGTGA	8 cut(s)	130, 142, 349, 407, 412, 793, 973, 1723
AvaI	CYCGRG	2 cut(s)	20, 1553
AvaII	GGWCC	2 cut(s)	1766, 1784
BaeGI	GKGCMC	2 cut(s)	330, 595
BalI	TGGCCA	2 cut(s)	266, 739
BanI	GGYRCC	5 cut(s)	88, 413, 528, 773, 794
BanII	GRGCYC	1 cut(s)	330
BarI	GAAGNNNNNNTAC	2 cut(s)	422, 454
BbrPI	CACGTG	2 cut(s)	1141, 1243
BbsI	GAAGAC	1 cut(s)	32
Bbv12I	GWGCWC	1 cut(s)	1464
BbvCI	CCTCAGC	1 cut(s)	521
BbvI	GCAGC	4 cut(s)	671, 1058, 1339, 2063
BccI	CCATC	4 cut(s)	170, 292, 425, 501
BceAI	ACGGC	2 cut(s)	850, 1936
BcgI	CGANNNNNNTGC	2 cut(s)	826, 860
BciT130I	CCWGG	8 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2181
BclI	TGATCA	2 cut(s)	1896, 2146
BcnI	CCSGG	1 cut(s)	2065
BcoDI	GTCTC	3 cut(s)	44, 89, 1768
BfmI	CTRYAG	1 cut(s)	2049
BfoI	RGCGCY	2 cut(s)	39, 83
BfuAI	ACCTGC	1 cut(s)	1494
BisI	GCNGC	4 cut(s)	660, 1047, 1328, 2052
BlpI	GCTNAGC	2 cut(s)	756, 1596
BlsI	GCNGC	4 cut(s)	661, 1048, 1329, 2053
BmcAI	AGTACT	1 cut(s)	1689
Bme1390I	CCNGG	9 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2065, 2181
Bme18I	GGWCC	2 cut(s)	1766, 1784
BmeT110I	CYCGRG	2 cut(s)	20, 1553
BmgT120I	GGNCC	5 cut(s)	326, 327, 1756, 1766, 1784
BmiI	GGNNCC	9 cut(s)	90, 140, 328, 415, 530, 775, 796, 1259, 1757
BmrFI	CCNGG	9 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2065, 2181
BmrI	ACTGGG	1 cut(s)	1379
BmsI	GCATC	7 cut(s)	156, 388, 934, 1215, 1729, 2050, 2171
BmuI	ACTGGG	1 cut(s)	1379
BpiI	GAAGAC	1 cut(s)	32
BpmI	CTGGAG	2 cut(s)	1809, 1998
Bpu10I	CCTNAGC	3 cut(s)	521, 573, 769
Bpu1102I	GCTNAGC	2 cut(s)	756, 1596
BpuEI	CTTGAG	1 cut(s)	472
BpuMI	CCSGG	1 cut(s)	2065
BsaAI	YACGTR	2 cut(s)	1141, 1243
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	44, 89
BsaWI	WCCGGW	3 cut(s)	129, 410, 2203
Bsc4I	CCNNNNNNNGG	6 cut(s)	375, 604, 810, 811, 1390, 2131
Bse118I	RCCGGY	2 cut(s)	115, 410
Bse1I	ACTGG	5 cut(s)	929, 1385, 1841, 1907, 1981
Bse3DI	GCAATG	3 cut(s)	1041, 1281, 2149
BseAI	TCCGGA	1 cut(s)	129
BseBI	CCWGG	8 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2181
BseGI	GGATG	6 cut(s)	162, 512, 639, 1656, 2065, 2204
BseLI	CCNNNNNNNGG	6 cut(s)	375, 604, 810, 811, 1390, 2131
BseMI	GCAATG	3 cut(s)	1041, 1281, 2149
BseMII	CTCAG	8 cut(s)	215, 396, 503, 512, 587, 770, 783, 1610
BseNI	ACTGG	5 cut(s)	929, 1385, 1841, 1907, 1981
BseRI	GAGGAG	2 cut(s)	62, 538
BseSI	GKGCMC	2 cut(s)	330, 595
BseXI	GCAGC	4 cut(s)	671, 1058, 1339, 2063
BseYI	CCCAGC	2 cut(s)	729, 1928
BsgI	GTGCAG	2 cut(s)	1346, 2160
BshFI	GGCC	8 cut(s)	266, 328, 434, 468, 559, 739, 993, 1758
BshNI	GGYRCC	5 cut(s)	88, 413, 528, 773, 794
BshTI	ACCGGT	1 cut(s)	410
BsiHKAI	GWGCWC	1 cut(s)	1464
BsiHKCI	CYCGRG	2 cut(s)	20, 1553
BsiSI	CCGG	6 cut(s)	92, 116, 130, 411, 2064, 2204
BslFI	GGGAC	2 cut(s)	795, 2080
BslI	CCNNNNNNNGG	6 cut(s)	375, 604, 810, 811, 1390, 2131
BsmAI	GTCTC	3 cut(s)	44, 89, 1768
BsmFI	GGGAC	2 cut(s)	795, 2080
BsmI	GAATGC	1 cut(s)	1662
BsnI	GGCC	8 cut(s)	266, 328, 434, 468, 559, 739, 993, 1758
Bso31I	GGTCTC	2 cut(s)	44, 89
BsoBI	CYCGRG	2 cut(s)	20, 1553
Bsp120I	GGGCCC	1 cut(s)	326
Bsp1286I	GDGCHC	3 cut(s)	330, 595, 1464
Bsp13I	TCCGGA	1 cut(s)	129
Bsp1407I	TGTACA	1 cut(s)	1587
Bsp143I	GATC	7 cut(s)	16, 103, 1014, 1103, 1347, 1896, 2146
Bsp1720I	GCTNAGC	2 cut(s)	756, 1596
Bsp19I	CCATGG	1 cut(s)	1706
BspACI	CCGC	5 cut(s)	196, 219, 390, 1158, 1892
BspANI	GGCC	8 cut(s)	266, 328, 434, 468, 559, 739, 993, 1758
BspCNI	CTCAG	8 cut(s)	214, 395, 502, 513, 586, 769, 782, 1609
BspEI	TCCGGA	1 cut(s)	129
BspHI	TCATGA	1 cut(s)	1446
BspLI	GGNNCC	9 cut(s)	90, 140, 328, 415, 530, 775, 796, 1259, 1757
BspMAI	CTGCAG	1 cut(s)	2053
BspMI	ACCTGC	1 cut(s)	1494
BspPI	GGATC	3 cut(s)	11, 98, 1111
BspT107I	GGYRCC	5 cut(s)	88, 413, 528, 773, 794
BspTNI	GGTCTC	2 cut(s)	44, 89
BsrDI	GCAATG	3 cut(s)	1041, 1281, 2149
BsrFI	RCCGGY	2 cut(s)	115, 410
BsrGI	TGTACA	1 cut(s)	1587
BsrI	ACTGG	5 cut(s)	929, 1385, 1841, 1907, 1981
BssAI	RCCGGY	2 cut(s)	115, 410
BssMI	GATC	7 cut(s)	16, 103, 1014, 1103, 1347, 1896, 2146
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	4 cut(s)	777, 854, 1706, 1769
Bst2UI	CCWGG	8 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2181
Bst4CI	ACNGT	8 cut(s)	424, 746, 1324, 1443, 1519, 1703, 1779, 1797
Bst6I	CTCTTC	3 cut(s)	66, 476, 2096
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	2 cut(s)	569, 2060
BstAUI	TGTACA	1 cut(s)	1587
BstBAI	YACGTR	2 cut(s)	1141, 1243
BstC8I	GCNNGC	7 cut(s)	388, 561, 664, 817, 1332, 1963, 1967
BstDEI	CTNAG	9 cut(s)	201, 382, 489, 521, 573, 756, 769, 1076, 1596
BstDSI	CCRYGG	1 cut(s)	1706
BstF5I	GGATG	6 cut(s)	162, 512, 639, 1656, 2065, 2204
BstH2I	RGCGCY	2 cut(s)	39, 83
BstHHI	GCGC	2 cut(s)	38, 82
BstKTI	GATC	7 cut(s)	19, 106, 1017, 1106, 1350, 1899, 2149
BstMAI	GTCTC	3 cut(s)	44, 89, 1768
BstMBI	GATC	7 cut(s)	16, 103, 1014, 1103, 1347, 1896, 2146
BstMWI	GCNNNNNNNGC	7 cut(s)	88, 218, 569, 659, 2023, 2060, 2069
BstNI	CCWGG	8 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2181
BstNSI	RCATGY	4 cut(s)	63, 350, 1588, 1906
BstSCI	CCNGG	9 cut(s)	141, 322, 531, 685, 1420, 1465, 1786, 2063, 2179
BstSFI	CTRYAG	1 cut(s)	2049
BstSLI	GKGCMC	2 cut(s)	330, 595
BstV1I	GCAGC	4 cut(s)	671, 1058, 1339, 2063
BstV2I	GAAGAC	1 cut(s)	32
BstXI	CCANNNNNNTGG	1 cut(s)	1421
BsuRI	GGCC	8 cut(s)	266, 328, 434, 468, 559, 739, 993, 1758
BtgI	CCRYGG	1 cut(s)	1706
BtsCI	GGATG	6 cut(s)	162, 512, 639, 1656, 2065, 2204
BtsI	GCAGTG	3 cut(s)	110, 750, 1194
BtsIMutI	CAGTG	6 cut(s)	110, 750, 1194, 1515, 1680, 1974
BveI	ACCTGC	1 cut(s)	1494
Cac8I	GCNNGC	7 cut(s)	388, 561, 664, 817, 1332, 1963, 1967
CciI	TCATGA	1 cut(s)	1446
CfoI	GCGC	2 cut(s)	38, 82
Cfr10I	RCCGGY	2 cut(s)	115, 410
Cfr13I	GGNCC	5 cut(s)	326, 327, 1756, 1766, 1784
CsiI	ACCWGGT	1 cut(s)	531
Csp6I	GTAC	4 cut(s)	529, 1588, 1688, 2032
CspAI	ACCGGT	1 cut(s)	410
CspCI	CAANNNNNGTGG	2 cut(s)	2000, 2035
CviQI	GTAC	4 cut(s)	529, 1588, 1688, 2032
DdeI	CTNAG	9 cut(s)	201, 382, 489, 521, 573, 756, 769, 1076, 1596
DpnI	GATC	7 cut(s)	18, 105, 1016, 1105, 1349, 1898, 2148
DpnII	GATC	7 cut(s)	16, 103, 1014, 1103, 1347, 1896, 2146
EaeI	YGGCCR	2 cut(s)	264, 737
Eam1104I	CTCTTC	3 cut(s)	66, 476, 2096
EarI	CTCTTC	3 cut(s)	66, 476, 2096
EciI	GGCGGA	2 cut(s)	208, 405
Eco130I	CCWWGG	4 cut(s)	777, 854, 1706, 1769
Eco147I	AGGCCT	2 cut(s)	434, 993
Eco24I	GRGCYC	1 cut(s)	330
Eco31I	GGTCTC	2 cut(s)	44, 89
Eco32I	GATATC	1 cut(s)	1210
Eco47I	GGWCC	2 cut(s)	1766, 1784
Eco57I	CTGAAG	1 cut(s)	1704
Eco72I	CACGTG	2 cut(s)	1141, 1243
Eco88I	CYCGRG	2 cut(s)	20, 1553
EcoO109I	RGGNCCY	2 cut(s)	327, 1756
EcoRII	CCWGG	8 cut(s)	141, 322, 531, 685, 1420, 1465, 1786, 2179
EcoRV	GATATC	1 cut(s)	1210
EcoT14I	CCWWGG	4 cut(s)	777, 854, 1706, 1769
EcoT38I	GRGCYC	1 cut(s)	330
ErhI	CCWWGG	4 cut(s)	777, 854, 1706, 1769
FaqI	GGGAC	2 cut(s)	795, 2080
FauNDI	CATATG	1 cut(s)	1673
FbaI	TGATCA	2 cut(s)	1896, 2146
Fnu4HI	GCNGC	4 cut(s)	660, 1047, 1328, 2052
FokI	GGATG	5 cut(s)	149, 519, 646, 1663, 2072
FriOI	GRGCYC	1 cut(s)	330
Fsp4HI	GCNGC	4 cut(s)	660, 1047, 1328, 2052
GlaI	GCGC	2 cut(s)	37, 81
GluI	GCNGC	4 cut(s)	660, 1047, 1328, 2052
GsaI	CCCAGC	2 cut(s)	733, 1932
GsuI	CTGGAG	2 cut(s)	1809, 1998
HaeII	RGCGCY	2 cut(s)	39, 83
HaeIII	GGCC	8 cut(s)	266, 328, 434, 468, 559, 739, 993, 1758
HapII	CCGG	6 cut(s)	92, 116, 130, 411, 2064, 2204
HhaI	GCGC	2 cut(s)	38, 82
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	2 cut(s)	36, 80
HinP1I	GCGC	2 cut(s)	36, 80
HincII	GTYRAC	1 cut(s)	538
HindII	GTYRAC	1 cut(s)	538
HindIII	AAGCTT	1 cut(s)	664
HinfI	GANTC	6 cut(s)	41, 319, 1509, 1570, 1728, 1888
HpaII	CCGG	6 cut(s)	92, 116, 130, 411, 2064, 2204
HphI	GGTGA	8 cut(s)	130, 142, 349, 407, 412, 793, 973, 1723
Hpy166II	GTNNAC	3 cut(s)	538, 1590, 1630
Hpy188I	TCNGA	7 cut(s)	46, 254, 297, 492, 878, 1543, 1668
Hpy188III	TCNNGA	6 cut(s)	20, 130, 481, 1018, 1107, 1447
Hpy8I	GTNNAC	3 cut(s)	538, 1590, 1630
Hpy99I	CGWCG	3 cut(s)	10, 104, 254
HpyAV	CCTTC	6 cut(s)	117, 334, 340, 424, 598, 808
HpyCH4III	ACNGT	8 cut(s)	424, 746, 1324, 1443, 1519, 1703, 1779, 1797
HpyCH4IV	ACGT	2 cut(s)	1140, 1242
HpyF10VI	GCNNNNNNNGC	7 cut(s)	88, 218, 569, 659, 2023, 2060, 2069
HpyF3I	CTNAG	9 cut(s)	201, 382, 489, 521, 573, 756, 769, 1076, 1596
HpySE526I	ACGT	2 cut(s)	1140, 1242
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	2 cut(s)	36, 80
Kpn2I	TCCGGA	1 cut(s)	129
KpnI	GGTACC	1 cut(s)	532
Ksp22I	TGATCA	2 cut(s)	1896, 2146
Kzo9I	GATC	7 cut(s)	16, 103, 1014, 1103, 1347, 1896, 2146
LmnI	GCTCC	5 cut(s)	343, 607, 1467, 1829, 1979
Lsp1109I	GCAGC	4 cut(s)	671, 1058, 1339, 2063
LweI	GCATC	7 cut(s)	156, 388, 934, 1215, 1729, 2050, 2171
MabI	ACCWGGT	1 cut(s)	531
MaeII	ACGT	2 cut(s)	1140, 1242
MaeIII	GTNAC	3 cut(s)	847, 1375, 1729
MalI	GATC	7 cut(s)	18, 105, 1016, 1105, 1349, 1898, 2148
MboI	GATC	7 cut(s)	16, 103, 1014, 1103, 1347, 1896, 2146
MfeI	CAATTG	1 cut(s)	370
MhlI	GDGCHC	3 cut(s)	330, 595, 1464
MlsI	TGGCCA	2 cut(s)	266, 739
MluCI	AATT	7 cut(s)	370, 638, 906, 1028, 1057, 1220, 1990
MluNI	TGGCCA	2 cut(s)	266, 739
MlyI	GAGTC	2 cut(s)	35, 1737
MmeI	TCCRAC	5 cut(s)	232, 856, 993, 1635, 1807
Mox20I	TGGCCA	2 cut(s)	266, 739
MroI	TCCGGA	1 cut(s)	129
MroXI	GAANNNNTTC	1 cut(s)	641
MscI	TGGCCA	2 cut(s)	266, 739
MseI	TTAA	4 cut(s)	306, 996, 1548, 2212
MslI	CAYNNNNRTG	4 cut(s)	227, 425, 1158, 1579
Msp20I	TGGCCA	2 cut(s)	266, 739
MspA1I	CMGCKG	4 cut(s)	386, 1330, 1600, 1894
MspI	CCGG	6 cut(s)	92, 116, 130, 411, 2064, 2204
MspR9I	CCNGG	9 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2065, 2181
MunI	CAATTG	1 cut(s)	370
Mva1269I	GAATGC	1 cut(s)	1662
MvaI	CCWGG	8 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2181
MwoI	GCNNNNNNNGC	7 cut(s)	88, 218, 569, 659, 2023, 2060, 2069
NciI	CCSGG	1 cut(s)	2065
NcoI	CCATGG	1 cut(s)	1706
NdeI	CATATG	1 cut(s)	1673
NdeII	GATC	7 cut(s)	16, 103, 1014, 1103, 1347, 1896, 2146
NlaIV	GGNNCC	9 cut(s)	90, 140, 328, 415, 530, 775, 796, 1259, 1757
NmuCI	GTSAC	3 cut(s)	847, 1375, 1729
NspI	RCATGY	4 cut(s)	63, 350, 1588, 1906
OliI	CACNNNNGTG	1 cut(s)	1579
PagI	TCATGA	1 cut(s)	1446
PceI	AGGCCT	2 cut(s)	434, 993
PctI	GAATGC	1 cut(s)	1662
PdmI	GAANNNNTTC	1 cut(s)	641
PfeI	GAWTC	4 cut(s)	319, 1509, 1570, 1888
PinAI	ACCGGT	1 cut(s)	410
PkrI	GCNGC	4 cut(s)	661, 1048, 1329, 2053
PleI	GAGTC	2 cut(s)	35, 1736
PmaCI	CACGTG	2 cut(s)	1141, 1243
PmlI	CACGTG	2 cut(s)	1141, 1243
PpsI	GAGTC	2 cut(s)	35, 1736
Ppu21I	YACGTR	2 cut(s)	1141, 1243
Psp6I	CCWGG	8 cut(s)	141, 322, 531, 685, 1420, 1465, 1786, 2179
PspCI	CACGTG	2 cut(s)	1141, 1243
PspFI	CCCAGC	2 cut(s)	729, 1928
PspGI	CCWGG	8 cut(s)	141, 322, 531, 685, 1420, 1465, 1786, 2179
PspN4I	GGNNCC	9 cut(s)	90, 140, 328, 415, 530, 775, 796, 1259, 1757
PspOMI	GGGCCC	1 cut(s)	326
PspPI	GGNCC	5 cut(s)	326, 327, 1756, 1766, 1784
PstI	CTGCAG	1 cut(s)	2053
PvuII	CAGCTG	3 cut(s)	386, 1330, 1600
RsaI	GTAC	4 cut(s)	530, 1589, 1689, 2033
RsaNI	GTAC	4 cut(s)	529, 1588, 1688, 2032
RseI	CAYNNNNRTG	4 cut(s)	227, 425, 1158, 1579
SaqAI	TTAA	4 cut(s)	306, 996, 1548, 2212
SatI	GCNGC	4 cut(s)	660, 1047, 1328, 2052
Sau3AI	GATC	7 cut(s)	16, 103, 1014, 1103, 1347, 1896, 2146
Sau96I	GGNCC	5 cut(s)	326, 327, 1756, 1766, 1784
ScaI	AGTACT	1 cut(s)	1689
SchI	GAGTC	2 cut(s)	35, 1737
ScrFI	CCNGG	9 cut(s)	143, 324, 533, 687, 1422, 1467, 1788, 2065, 2181
SduI	GDGCHC	3 cut(s)	330, 595, 1464
SexAI	ACCWGGT	1 cut(s)	531
SfaNI	GCATC	7 cut(s)	156, 388, 934, 1215, 1729, 2050, 2171
SfcI	CTRYAG	1 cut(s)	2049
SgrAI	CRCCGGYG	1 cut(s)	410
SinI	GGWCC	2 cut(s)	1766, 1784
SmiMI	CAYNNNNRTG	4 cut(s)	227, 425, 1158, 1579
SmlI	CTYRAG	1 cut(s)	451
SmoI	CTYRAG	1 cut(s)	451
Sse9I	AATT	7 cut(s)	370, 638, 906, 1028, 1057, 1220, 1990
SseBI	AGGCCT	2 cut(s)	434, 993
SsiI	CCGC	5 cut(s)	196, 219, 390, 1158, 1892
StuI	AGGCCT	2 cut(s)	434, 993
StyD4I	CCNGG	9 cut(s)	141, 322, 531, 685, 1420, 1465, 1786, 2063, 2179
StyI	CCWWGG	4 cut(s)	777, 854, 1706, 1769
TaaI	ACNGT	8 cut(s)	424, 746, 1324, 1443, 1519, 1703, 1779, 1797
TaiI	ACGT	2 cut(s)	1143, 1245
TaqI	TCGA	5 cut(s)	8, 15, 69, 807, 949
TaqII	GACCGA	1 cut(s)	113
TasI	AATT	7 cut(s)	370, 638, 906, 1028, 1057, 1220, 1990
TatI	WGTACW	3 cut(s)	1587, 1687, 2031
TfiI	GAWTC	4 cut(s)	319, 1509, 1570, 1888
Tru1I	TTAA	4 cut(s)	306, 996, 1548, 2212
Tru9I	TTAA	4 cut(s)	306, 996, 1548, 2212
TscAI	CASTG	6 cut(s)	117, 757, 1194, 1522, 1687, 1981
TseFI	GTSAC	3 cut(s)	847, 1375, 1729
TseI	GCWGC	4 cut(s)	659, 1046, 1327, 2051
Tsp45I	GTSAC	3 cut(s)	847, 1375, 1729
TspGWI	ACGGA	1 cut(s)	646
TspRI	CASTG	6 cut(s)	117, 757, 1194, 1522, 1687, 1981
VpaK11BI	GGWCC	2 cut(s)	1766, 1784
XapI	RAATTY	1 cut(s)	638
XceI	RCATGY	4 cut(s)	63, 350, 1588, 1906
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1704, 1848
XmnI	GAANNNNTTC	1 cut(s)	641
ZrmI	AGTACT	1 cut(s)	1689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.