Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0010299

Physical Location & Seq

Genomic Coordinates Forward (+)

29303754 .. 29307540

Gene Structure 3787 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g28800.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGAGTGCATTAACTACTTCGTGGTCTTACTCTCTGAGTCTCGACACTTTAAATTCCAAGCAACCACCACAAAAACAGACGGACACATACTTAGTCGACTCTGAAAGGGAGAACAGAGGGGGAGAGAGAGCTTTCAACTTTGTTTCAATGGCGTCCAATAACCAAAGGGACTCAGAGAAGGCGCGTAACGGCACTAACAGCGCCGGCGACGATTACCCACATCACGATTTTCCAGAATCGGACGGTCACGAGCGATGCAAAATAGAAGAGGTGGCGCTGGTGGTGCCGGAGACCGACGACCCGACGATGCCGGTGATGACATTCAGGGCGTTGTTCTTGGGGCTGACGTCGTGCACTCTCCTAATCTTCCTCAACACCTTCTTCAGCTTCCGCACTCAGCCGCTGGCAATCTCCGCCATCCTCATGCAGATTATTACGCTGCCCATTGGAAAGTTCATGGCCTCCGCCCTCCCCCGCCGCCAGCACAGCCTCCGCGGGTGGCGGTTCAGCCTCAACCCCGGGCCCTTCAACATAAAGGAGCATGTTATTATTACCATTTTTGCGAATTGTGGGATTTCTTACGGTGGGGGTGATGCCTACTCGATTGGCGCCATCACCATTATGAAGGCCTATTACAAGCAGAGCTTGAGTTTTATCCTTAGCCTCGTCATCGTCCTTACCACTCAGATAATTGGGTATGGATGGGCTGGGATTTTCAGGAGGTACTTGGTCGACCCGGTGGAAATGTGGTGGCCTTCCAACGTTGCTCAGGTTTCTCTGTTTAGAGCACTCCATGAAAAAGAACATAAAGCGAAGGGCCTTACCCAGTTGCAGTTTTTTCTCATTGCCATGACAGCAAGCTTTCTCTACTATGCACTCCCCGGCTATCTCTTCCCCATCTTGACGTTCTTCTCATGGGTCTGCTGGGCTTGGCCACACAGTATCACAGCTAAGCAGATCGGATCAAGTTACAATGGACTTGGTGTTGGTGCCTTCAACTTCGATTGGGCTGGGATTTCTGCTTATCGTGGCAGCCCCCTCGTCACGCCATGGACTTCCATTCTCAACGTTGGGGTTGGATTTGTCATCTTCATCTACATCATTGTCCCTCTTTGTTACTGGAAGTTTAACACTTTCGATGCTCAAAAGTTCCCTATATTTTCCAACAAGCTGTTCACTTCTACTGGGCATAAATACGAAACTACCAAGATCTTAACACCCCAGCTTGATCTTAATATTGATGCCTATAATAGTTACGGCAAGCTTTATCTTAGCCCCCTTTTCGCTTTGTCCATTGGATCGGGATTTGCAAGATTTTCAGCAACCCTAGTTCATGTGGCACTGTTTCACGGAAGAGCTATTTTGCAGCAAAGCAAATCGGCAATGAAGAACGCAAAAATGGATATTCATGAGAAATTGATGAAAAATTACAAACAAGTGCCTGAGTGGTGGTTCCTTGTTTTGTTAGCTGTGAGCGTCGTCCTGTCCCTGGTGATGTCTTTTGTATGGAAAGAAACTGTGCAGCTGCCATGGTGGGGTTTGTTGTTTGCCTTTGTCTTGTCTTTCGTCGTTACCCTCCCTGTTGGAGTCATTCAAGCTACCACTAACCAACAACCTGGATTTGATATCATAGCACAATTCATGATTGGGTATATTCTACCAGGAAAACCAATTGCAAACTTGCTTTTCAAAATCTATGGACGAATCAGCACTGTCCACGCTCTTTCTTTCCTGTCTGACCTCAAACTTGGGCACTATATGAAGATTCCACCTCGATGCATGTACACTGCTCAGCTGGTGGGAACTCTAGTTGCCGGTATTGTGAACCTCGCAGTTGCATGGTGGATGCTGGAAAACATCGAGAACATCTGCGATGTTGAATCCCACAATCCAAACAGCCCGTGGACTTGTCCTAAATACAGAGTCACCTTCGATGCTTCTGTTATATGGGGTCTAATTGGACCAAGGCGACTGTTTGGACCCAGAGGATTGTATAGGAACTTGGTGTGGCTATTCCTTGTTGGAGCTTTGTTGCCGTTTCCAATTTGTGCAATGAGCAAAATCTTCCCAGACAAGAAATGGATTCTATTGATCAACATGCCAGTCATCACTTATGGCTTTGCGGGGATGCCACCTGCAACTCCCACCAATATAGCAAGCTGGCTTATCACCGGAGGTATCTTCAACTACTTCGTGTTCAAATACCACAAGCATTGGTGGCAGAAATACAACTATGTCCTGTCTGCAGCTTTGGATGCGGGGACAGCTTTCATGGGTGTCCTCCTATTCTTCGCCTTGCAGAATCCGAAGCACGAATTGAAATGGTGGGGGACTGAACTCGATCATTGTCCTCTGGCGACATGCCCCATTGCACCAGGTATTCACGTTGAAGGATGTCCAGTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006873 GO:0006875 GO:0008150 GO:0008324 GO:0009506 GO:0009987 GO:0010232 GO:0010233 GO:0015075 GO:0015318 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030054 GO:0032501 GO:0034220 GO:0042592 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0098655 GO:0098771 GO:1990388

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

803

Amino Acids

90.45

Weight (kDa)

9.12

Isoelectric Point (pI)

35.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16370
fragaria_vesca	FvH4_3g00400 FvH4_3g00400
malus_domestica	MD00G1163400.v1.1 MD05G1360700.v1.1 MD08G1191400.v1.1
prunus_persica	Prupe.4G004600_v2.0.a1 Prupe.4G004600_v2.0.a1
pyrus_communis	pycom05g32750 pycom08g16500 pycom10g28800
rosa_chinensis	RchiOBHm_Chr5g0000601
rosa_laevigata	RLG00000030879
rosa_multiflora	Rmu_sc0003699.1_g000006
rosa_roxburghii	Rroxscaffold_1G00075610
rosa_rugosa	Rorug04G0385400
rosa_samantha	Rh5AG005000 Rh5BG006500 Rh5CG005400 Rh5DG005300
rosa_wichuraiana	Rw5G000490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2143
AatII	GACGTC	1 cut(s)	350
Acc36I	ACCTGC	1 cut(s)	2143
AccB1I	GGYRCC	3 cut(s)	283, 608, 989
AccI	GTMKAC	2 cut(s)	96, 732
AccII	CGCG	2 cut(s)	184, 495
AclI	AACGTT	2 cut(s)	762, 1068
AclWI	GGATC	2 cut(s)	970, 1306
AcoI	YGGCCR	1 cut(s)	932
AcsI	RAATTY	1 cut(s)	52
AcuI	CTGAAG	1 cut(s)	367
AcyI	GRCGYC	3 cut(s)	152, 347, 609
AfaI	GTAC	2 cut(s)	725, 1784
AfiI	CCNNNNNNNGG	2 cut(s)	1489, 1535
AjnI	CCWGG	4 cut(s)	1488, 1615, 1660, 2374
AjuI	GAANNNNNNNTTGG	2 cut(s)	1157, 1189
Alw21I	GWGCWC	2 cut(s)	356, 790
Alw26I	GTCTC	2 cut(s)	44, 284
Alw44I	GTGCAC	1 cut(s)	352
AlwI	GGATC	2 cut(s)	970, 1306
AlwNI	CAGNNNCTG	1 cut(s)	403
Ama87I	CYCGRG	1 cut(s)	518
AoxI	GGCC	6 cut(s)	459, 521, 627, 752, 817, 932
ApaI	GGGCCC	1 cut(s)	525
ApaLI	GTGCAC	1 cut(s)	352
ApeKI	GCWGC	6 cut(s)	439, 1032, 1366, 1522, 1525, 2246
ApoI	RAATTY	1 cut(s)	52
AspLEI	GCGC	4 cut(s)	184, 203, 277, 611
AspS9I	GGNCC	5 cut(s)	521, 522, 817, 1961, 1979
AsuC2I	CCSGG	4 cut(s)	519, 520, 737, 882
AsuHPI	GGTGA	6 cut(s)	325, 602, 607, 1504, 1918, 2161
AvaI	CYCGRG	1 cut(s)	518
AvaII	GGWCC	2 cut(s)	1961, 1979
BaeGI	GKGCMC	3 cut(s)	356, 525, 1755
BalI	TGGCCA	1 cut(s)	934
BanI	GGYRCC	3 cut(s)	283, 608, 989
BanII	GRGCYC	1 cut(s)	525
BarI	GAAGNNNNNNTAC	2 cut(s)	617, 649
BauI	CACGAG	1 cut(s)	248
Bbv12I	GWGCWC	2 cut(s)	356, 790
BbvI	GCAGC	6 cut(s)	426, 1044, 1378, 1512, 1534, 2258
BccI	CCATC	4 cut(s)	425, 620, 696, 905
BceAI	ACGGC	3 cut(s)	205, 1273, 2020
BcgI	CGANNNNNNTGC	2 cut(s)	1021, 1055
BciT130I	CCWGG	4 cut(s)	1490, 1617, 1662, 2376
BclI	TGATCA	1 cut(s)	2091
BcnI	CCSGG	4 cut(s)	519, 520, 737, 882
BcoDI	GTCTC	2 cut(s)	44, 284
BfaI	CTAG	2 cut(s)	1328, 1808
BfmI	CTRYAG	1 cut(s)	2244
BfoI	RGCGCY	3 cut(s)	204, 278, 612
BfuAI	ACCTGC	1 cut(s)	2143
BglII	AGATCT	1 cut(s)	1209
BisI	GCNGC	8 cut(s)	401, 440, 478, 1033, 1367, 1523, 1526, 2247
BlpI	GCTNAGC	2 cut(s)	951, 1791
BlsI	GCNGC	8 cut(s)	402, 441, 479, 1034, 1368, 1524, 1527, 2248
Bme1390I	CCNGG	8 cut(s)	519, 520, 737, 882, 1490, 1617, 1662, 2376
Bme18I	GGWCC	2 cut(s)	1961, 1979
BmeT110I	CYCGRG	1 cut(s)	518
BmgT120I	GGNCC	5 cut(s)	521, 522, 817, 1961, 1979
BmiI	GGNNCC	6 cut(s)	285, 523, 610, 991, 1454, 1981
BmrFI	CCNGG	8 cut(s)	519, 520, 737, 882, 1490, 1617, 1662, 2376
BmrI	ACTGGG	2 cut(s)	820, 1194
BmuI	ACTGGG	2 cut(s)	820, 1194
Bpu10I	CCTNAGC	2 cut(s)	659, 768
Bpu1102I	GCTNAGC	2 cut(s)	951, 1791
BpuEI	CTTGAG	1 cut(s)	667
BpuMI	CCSGG	4 cut(s)	519, 520, 737, 882
BsaHI	GRCGYC	3 cut(s)	152, 347, 609
BsaI	GGTCTC	1 cut(s)	284
BsaJI	CCNNGG	9 cut(s)	493, 517, 518, 880, 1049, 1488, 1529, 1901, 1964
BsaWI	WCCGGW	1 cut(s)	2171
Bsc4I	CCNNNNNNNGG	2 cut(s)	1489, 1535
Bse118I	RCCGGY	3 cut(s)	203, 310, 1814
Bse1I	ACTGG	5 cut(s)	826, 1124, 1189, 2102, 2399
Bse3DI	GCAATG	4 cut(s)	843, 1389, 2058, 2367
BseBI	CCWGG	4 cut(s)	1490, 1617, 1662, 2376
BseDI	CCNNGG	9 cut(s)	493, 517, 518, 880, 1049, 1488, 1529, 1901, 1964
BseGI	GGATG	6 cut(s)	417, 707, 1851, 2133, 2260, 2399
BseLI	CCNNNNNNNGG	2 cut(s)	1489, 1535
BseMI	GCAATG	4 cut(s)	843, 1389, 2058, 2367
BseMII	CTCAG	7 cut(s)	26, 186, 410, 698, 782, 1434, 1805
BseNI	ACTGG	5 cut(s)	826, 1124, 1189, 2102, 2399
BseSI	GKGCMC	3 cut(s)	356, 525, 1755
BseXI	GCAGC	6 cut(s)	426, 1044, 1378, 1512, 1534, 2258
BseYI	CCCAGC	4 cut(s)	707, 924, 1010, 1221
BsgI	GTGCAG	1 cut(s)	1541
Bsh1236I	CGCG	2 cut(s)	184, 495
BshFI	GGCC	6 cut(s)	461, 523, 629, 754, 819, 934
BshNI	GGYRCC	3 cut(s)	283, 608, 989
BsiHKAI	GWGCWC	2 cut(s)	356, 790
BsiHKCI	CYCGRG	1 cut(s)	518
BsiSI	CCGG	8 cut(s)	204, 287, 311, 519, 737, 882, 1815, 2172
BslFI	GGGAC	5 cut(s)	182, 1091, 1471, 2275, 2344
BslI	CCNNNNNNNGG	2 cut(s)	1489, 1535
BsmAI	GTCTC	2 cut(s)	44, 284
BsmFI	GGGAC	5 cut(s)	182, 1091, 1471, 2275, 2344
BsnI	GGCC	6 cut(s)	461, 523, 629, 754, 819, 934
Bso31I	GGTCTC	1 cut(s)	284
BsoBI	CYCGRG	1 cut(s)	518
Bsp120I	GGGCCC	1 cut(s)	521
Bsp1286I	GDGCHC	4 cut(s)	356, 525, 790, 1755
Bsp1407I	TGTACA	1 cut(s)	1782
Bsp143I	GATC	7 cut(s)	957, 962, 1209, 1228, 1298, 2091, 2341
Bsp1720I	GCTNAGC	2 cut(s)	951, 1791
Bsp19I	CCATGG	2 cut(s)	1049, 1529
BspANI	GGCC	6 cut(s)	461, 523, 629, 754, 819, 934
BspCNI	CTCAG	7 cut(s)	27, 185, 409, 697, 781, 1435, 1804
BspFNI	CGCG	2 cut(s)	184, 495
BspHI	TCATGA	2 cut(s)	1408, 1641
BspLI	GGNNCC	6 cut(s)	285, 523, 610, 991, 1454, 1981
BspMAI	CTGCAG	1 cut(s)	2248
BspMI	ACCTGC	1 cut(s)	2143
BspPI	GGATC	2 cut(s)	970, 1306
BspQI	GCTCTTC	1 cut(s)	1348
BspT107I	GGYRCC	3 cut(s)	283, 608, 989
BspTNI	GGTCTC	1 cut(s)	284
BsrDI	GCAATG	4 cut(s)	843, 1389, 2058, 2367
BsrFI	RCCGGY	3 cut(s)	203, 310, 1814
BsrGI	TGTACA	1 cut(s)	1782
BsrI	ACTGG	5 cut(s)	826, 1124, 1189, 2102, 2399
BssAI	RCCGGY	3 cut(s)	203, 310, 1814
BssECI	CCNNGG	9 cut(s)	493, 517, 518, 880, 1049, 1488, 1529, 1901, 1964
BssMI	GATC	7 cut(s)	957, 962, 1209, 1228, 1298, 2091, 2341
BssNI	GRCGYC	3 cut(s)	152, 347, 609
BssSI	CACGAG	1 cut(s)	248
BssT1I	CCWWGG	3 cut(s)	1049, 1529, 1964
Bst2BI	CACGAG	1 cut(s)	248
Bst2UI	CCWGG	4 cut(s)	1490, 1617, 1662, 2376
Bst4CI	ACNGT	7 cut(s)	245, 584, 941, 1344, 1519, 1714, 1974
Bst6I	CTCTTC	3 cut(s)	261, 896, 1348
BstACI	GRCGYC	3 cut(s)	152, 347, 609
BstAUI	TGTACA	1 cut(s)	1782
BstC8I	GCNNGC	7 cut(s)	205, 405, 482, 859, 1262, 2158, 2162
BstDSI	CCRYGG	4 cut(s)	493, 1049, 1529, 1901
BstF5I	GGATG	6 cut(s)	417, 707, 1851, 2133, 2260, 2399
BstFNI	CGCG	2 cut(s)	184, 495
BstH2I	RGCGCY	3 cut(s)	204, 278, 612
BstHHI	GCGC	4 cut(s)	184, 203, 277, 611
BstKTI	GATC	7 cut(s)	960, 965, 1212, 1231, 1301, 2094, 2344
BstMAI	GTCTC	2 cut(s)	44, 284
BstMBI	GATC	7 cut(s)	957, 962, 1209, 1228, 1298, 2091, 2341
BstMWI	GCNNNNNNNGC	8 cut(s)	198, 283, 413, 486, 854, 2218, 2255, 2264
BstNI	CCWGG	4 cut(s)	1490, 1617, 1662, 2376
BstNSI	RCATGY	4 cut(s)	545, 1783, 2101, 2364
BstSCI	CCNGG	8 cut(s)	517, 518, 735, 880, 1488, 1615, 1660, 2374
BstSFI	CTRYAG	1 cut(s)	2244
BstSLI	GKGCMC	3 cut(s)	356, 525, 1755
BstUI	CGCG	2 cut(s)	184, 495
BstV1I	GCAGC	6 cut(s)	426, 1044, 1378, 1512, 1534, 2258
BstX2I	RGATCY	1 cut(s)	1209
BstXI	CCANNNNNNTGG	1 cut(s)	1616
BstYI	RGATCY	1 cut(s)	1209
BsuRI	GGCC	6 cut(s)	461, 523, 629, 754, 819, 934
BtgI	CCRYGG	4 cut(s)	493, 1049, 1529, 1901
BtgZI	GCGATG	2 cut(s)	268, 1887
BtsCI	GGATG	6 cut(s)	417, 707, 1851, 2133, 2260, 2399
BtsI	GCAGTG	1 cut(s)	1785
BtsIMutI	CAGTG	3 cut(s)	1340, 1710, 1785
BveI	ACCTGC	1 cut(s)	2143
Cac8I	GCNNGC	7 cut(s)	205, 405, 482, 859, 1262, 2158, 2162
CaiI	CAGNNNCTG	1 cut(s)	403
CciI	TCATGA	2 cut(s)	1408, 1641
CfoI	GCGC	4 cut(s)	184, 203, 277, 611
Cfr10I	RCCGGY	3 cut(s)	203, 310, 1814
Cfr13I	GGNCC	5 cut(s)	521, 522, 817, 1961, 1979
Cfr42I	CCGCGG	1 cut(s)	496
Cfr9I	CCCGGG	1 cut(s)	518
CseI	GACGC	2 cut(s)	141, 1465
CsiI	ACCWGGT	1 cut(s)	2374
Csp6I	GTAC	2 cut(s)	724, 1783
CspCI	CAANNNNNGTGG	2 cut(s)	2195, 2230
CviQI	GTAC	2 cut(s)	724, 1783
DinI	GGCGCC	1 cut(s)	610
DpnI	GATC	7 cut(s)	959, 964, 1211, 1230, 1300, 2093, 2343
DpnII	GATC	7 cut(s)	957, 962, 1209, 1228, 1298, 2091, 2341
DraI	TTTAAA	1 cut(s)	51
EaeI	YGGCCR	1 cut(s)	932
Eam1104I	CTCTTC	3 cut(s)	261, 896, 1348
EarI	CTCTTC	3 cut(s)	261, 896, 1348
EciI	GGCGGA	2 cut(s)	403, 454
Eco130I	CCWWGG	3 cut(s)	1049, 1529, 1964
Eco147I	AGGCCT	1 cut(s)	629
Eco24I	GRGCYC	1 cut(s)	525
Eco31I	GGTCTC	1 cut(s)	284
Eco32I	GATATC	1 cut(s)	1627
Eco47I	GGWCC	2 cut(s)	1961, 1979
Eco57I	CTGAAG	1 cut(s)	367
Eco88I	CYCGRG	1 cut(s)	518
EcoO109I	RGGNCCY	2 cut(s)	522, 817
EcoRII	CCWGG	4 cut(s)	1488, 1615, 1660, 2374
EcoRV	GATATC	1 cut(s)	1627
EcoT14I	CCWWGG	3 cut(s)	1049, 1529, 1964
EcoT22I	ATGCAT	1 cut(s)	1781
EcoT38I	GRGCYC	1 cut(s)	525
EgeI	GGCGCC	1 cut(s)	610
EheI	GGCGCC	1 cut(s)	610
ErhI	CCWWGG	3 cut(s)	1049, 1529, 1964
FalI	AAGNNNNNCTT	2 cut(s)	629, 661
FaqI	GGGAC	5 cut(s)	182, 1091, 1471, 2275, 2344
FauI	CCCGC	4 cut(s)	482, 488, 2116, 2251
FbaI	TGATCA	1 cut(s)	2091
FblI	GTMKAC	2 cut(s)	96, 732
Fnu4HI	GCNGC	8 cut(s)	401, 440, 478, 1033, 1367, 1523, 1526, 2247
FokI	GGATG	5 cut(s)	404, 714, 1858, 2140, 2267
FriOI	GRGCYC	1 cut(s)	525
Fsp4HI	GCNGC	8 cut(s)	401, 440, 478, 1033, 1367, 1523, 1526, 2247
FspBI	CTAG	2 cut(s)	1328, 1808
GlaI	GCGC	4 cut(s)	183, 202, 276, 610
GluI	GCNGC	8 cut(s)	401, 440, 478, 1033, 1367, 1523, 1526, 2247
GsaI	CCCAGC	4 cut(s)	711, 928, 1014, 1225
HaeII	RGCGCY	3 cut(s)	204, 278, 612
HaeIII	GGCC	6 cut(s)	461, 523, 629, 754, 819, 934
HapII	CCGG	8 cut(s)	204, 287, 311, 519, 737, 882, 1815, 2172
HgaI	GACGC	2 cut(s)	141, 1465
HhaI	GCGC	4 cut(s)	184, 203, 277, 611
Hin1I	GRCGYC	3 cut(s)	152, 347, 609
Hin6I	GCGC	4 cut(s)	182, 201, 275, 609
HinP1I	GCGC	4 cut(s)	182, 201, 275, 609
HincII	GTYRAC	2 cut(s)	97, 733
HindII	GTYRAC	2 cut(s)	97, 733
HindIII	AAGCTT	2 cut(s)	859, 1262
HpaII	CCGG	8 cut(s)	204, 287, 311, 519, 737, 882, 1815, 2172
HphI	GGTGA	6 cut(s)	325, 602, 607, 1504, 1918, 2161
Hpy166II	GTNNAC	8 cut(s)	97, 354, 733, 1176, 1717, 1785, 1825, 1905
Hpy188I	TCNGA	8 cut(s)	36, 103, 175, 241, 687, 962, 1738, 2307
Hpy8I	GTNNAC	8 cut(s)	97, 354, 733, 1176, 1717, 1785, 1825, 1905
Hpy99I	CGWCG	6 cut(s)	212, 299, 307, 352, 1481, 1571
HpyAV	CCTTC	9 cut(s)	172, 388, 535, 619, 765, 808, 1003, 1939, 2384
HpyCH4III	ACNGT	7 cut(s)	245, 584, 941, 1344, 1519, 1714, 1974
HpyCH4IV	ACGT	5 cut(s)	347, 762, 905, 1068, 2385
HpyF10VI	GCNNNNNNNGC	8 cut(s)	198, 283, 413, 486, 854, 2218, 2255, 2264
HpySE526I	ACGT	5 cut(s)	347, 762, 905, 1068, 2385
Hsp92I	GRCGYC	3 cut(s)	152, 347, 609
HspAI	GCGC	4 cut(s)	182, 201, 275, 609
KasI	GGCGCC	1 cut(s)	608
KroI	GCCGGC	1 cut(s)	203
KroNI	GCCGGC	1 cut(s)	205
Ksp22I	TGATCA	1 cut(s)	2091
KspI	CCGCGG	1 cut(s)	496
Kzo9I	GATC	7 cut(s)	957, 962, 1209, 1228, 1298, 2091, 2341
LguI	GCTCTTC	1 cut(s)	1348
LmnI	GCTCC	2 cut(s)	538, 2024
Lsp1109I	GCAGC	6 cut(s)	426, 1044, 1378, 1512, 1534, 2258
MabI	ACCWGGT	1 cut(s)	2374
MaeI	CTAG	2 cut(s)	1328, 1808
MaeII	ACGT	5 cut(s)	347, 762, 905, 1068, 2385
MaeIII	GTNAC	8 cut(s)	185, 245, 968, 1042, 1115, 1253, 1570, 1924
MalI	GATC	7 cut(s)	959, 964, 1211, 1230, 1300, 2093, 2343
MboI	GATC	7 cut(s)	957, 962, 1209, 1228, 1298, 2091, 2341
MfeI	CAATTG	1 cut(s)	1671
MflI	RGATCY	1 cut(s)	1209
MhlI	GDGCHC	4 cut(s)	356, 525, 790, 1755
MlsI	TGGCCA	1 cut(s)	934
MluNI	TGGCCA	1 cut(s)	934
Mly113I	GGCGCC	1 cut(s)	609
MlyI	GAGTC	5 cut(s)	46, 92, 164, 1596, 1932
MmeI	TCCRAC	5 cut(s)	783, 1057, 1188, 1564, 2002
Mox20I	TGGCCA	1 cut(s)	934
Mph1103I	ATGCAT	1 cut(s)	1781
MreI	CGCCGGCG	1 cut(s)	203
MroNI	GCCGGC	1 cut(s)	203
MscI	TGGCCA	1 cut(s)	934
MseI	TTAA	6 cut(s)	11, 50, 1128, 1214, 1233, 2407
MslI	CAYNNNNRTG	4 cut(s)	422, 620, 848, 1774
Msp20I	TGGCCA	1 cut(s)	934
MspA1I	CMGCKG	4 cut(s)	403, 495, 1525, 1795
MspI	CCGG	8 cut(s)	204, 287, 311, 519, 737, 882, 1815, 2172
MspR9I	CCNGG	8 cut(s)	519, 520, 737, 882, 1490, 1617, 1662, 2376
MunI	CAATTG	1 cut(s)	1671
MvaI	CCWGG	4 cut(s)	1490, 1617, 1662, 2376
MvnI	CGCG	2 cut(s)	184, 495
MwoI	GCNNNNNNNGC	8 cut(s)	198, 283, 413, 486, 854, 2218, 2255, 2264
NaeI	GCCGGC	1 cut(s)	205
NarI	GGCGCC	1 cut(s)	609
NciI	CCSGG	4 cut(s)	519, 520, 737, 882
NcoI	CCATGG	2 cut(s)	1049, 1529
NdeII	GATC	7 cut(s)	957, 962, 1209, 1228, 1298, 2091, 2341
NgoMIV	GCCGGC	1 cut(s)	203
NlaIV	GGNNCC	6 cut(s)	285, 523, 610, 991, 1454, 1981
NmuCI	GTSAC	3 cut(s)	245, 1042, 1924
NsiI	ATGCAT	1 cut(s)	1781
NspI	RCATGY	4 cut(s)	545, 1783, 2101, 2364
PagI	TCATGA	2 cut(s)	1408, 1641
PaqCI	CACCTGC	1 cut(s)	2143
PceI	AGGCCT	1 cut(s)	629
PciSI	GCTCTTC	1 cut(s)	1348
PdiI	GCCGGC	1 cut(s)	205
PfeI	GAWTC	6 cut(s)	236, 1704, 1765, 1880, 2083, 2302
PkrI	GCNGC	8 cut(s)	402, 441, 479, 1034, 1368, 1524, 1527, 2248
PleI	GAGTC	5 cut(s)	45, 92, 164, 1595, 1931
PluTI	GGCGCC	1 cut(s)	612
PpsI	GAGTC	5 cut(s)	45, 92, 164, 1595, 1931
Psp1406I	AACGTT	2 cut(s)	762, 1068
Psp6I	CCWGG	4 cut(s)	1488, 1615, 1660, 2374
PspFI	CCCAGC	4 cut(s)	707, 924, 1010, 1221
PspGI	CCWGG	4 cut(s)	1488, 1615, 1660, 2374
PspN4I	GGNNCC	6 cut(s)	285, 523, 610, 991, 1454, 1981
PspOMI	GGGCCC	1 cut(s)	521
PspPI	GGNCC	5 cut(s)	521, 522, 817, 1961, 1979
PstI	CTGCAG	1 cut(s)	2248
PstNI	CAGNNNCTG	1 cut(s)	403
PsuI	RGATCY	1 cut(s)	1209
PvuII	CAGCTG	2 cut(s)	1525, 1795
RsaI	GTAC	2 cut(s)	725, 1784
RsaNI	GTAC	2 cut(s)	724, 1783
RseI	CAYNNNNRTG	4 cut(s)	422, 620, 848, 1774
SacII	CCGCGG	1 cut(s)	496
SalI	GTCGAC	2 cut(s)	95, 731
SapI	GCTCTTC	1 cut(s)	1348
SaqAI	TTAA	6 cut(s)	11, 50, 1128, 1214, 1233, 2407
SatI	GCNGC	8 cut(s)	401, 440, 478, 1033, 1367, 1523, 1526, 2247
Sau3AI	GATC	7 cut(s)	957, 962, 1209, 1228, 1298, 2091, 2341
Sau96I	GGNCC	5 cut(s)	521, 522, 817, 1961, 1979
SchI	GAGTC	5 cut(s)	46, 92, 164, 1596, 1932
ScrFI	CCNGG	8 cut(s)	519, 520, 737, 882, 1490, 1617, 1662, 2376
SduI	GDGCHC	4 cut(s)	356, 525, 790, 1755
SexAI	ACCWGGT	1 cut(s)	2374
SfcI	CTRYAG	1 cut(s)	2244
SfoI	GGCGCC	1 cut(s)	610
Sfr303I	CCGCGG	1 cut(s)	496
SgrAI	CRCCGGYG	1 cut(s)	203
SgrBI	CCGCGG	1 cut(s)	496
SinI	GGWCC	2 cut(s)	1961, 1979
SmaI	CCCGGG	1 cut(s)	520
SmiMI	CAYNNNNRTG	4 cut(s)	422, 620, 848, 1774
SmlI	CTYRAG	1 cut(s)	646
SmoI	CTYRAG	1 cut(s)	646
SseBI	AGGCCT	1 cut(s)	629
SspDI	GGCGCC	1 cut(s)	608
SspI	AATATT	1 cut(s)	1237
SspMI	CTAG	2 cut(s)	1328, 1808
StuI	AGGCCT	1 cut(s)	629
StyD4I	CCNGG	8 cut(s)	517, 518, 735, 880, 1488, 1615, 1660, 2374
StyI	CCWWGG	3 cut(s)	1049, 1529, 1964
TaaI	ACNGT	7 cut(s)	245, 584, 941, 1344, 1519, 1714, 1974
TaiI	ACGT	5 cut(s)	350, 765, 908, 1071, 2388
TaqII	GACCGA	1 cut(s)	308
TatI	WGTACW	1 cut(s)	1782
TauI	GCSGC	2 cut(s)	403, 480
TfiI	GAWTC	6 cut(s)	236, 1704, 1765, 1880, 2083, 2302
Tru1I	TTAA	6 cut(s)	11, 50, 1128, 1214, 1233, 2407
Tru9I	TTAA	6 cut(s)	11, 50, 1128, 1214, 1233, 2407
TscAI	CASTG	3 cut(s)	1347, 1717, 1792
TseFI	GTSAC	3 cut(s)	245, 1042, 1924
TseI	GCWGC	6 cut(s)	439, 1032, 1366, 1522, 1525, 2246
Tsp45I	GTSAC	3 cut(s)	245, 1042, 1924
TspGWI	ACGGA	2 cut(s)	95, 1365
TspMI	CCCGGG	1 cut(s)	518
TspRI	CASTG	3 cut(s)	1347, 1717, 1792
VneI	GTGCAC	1 cut(s)	352
VpaK11BI	GGWCC	2 cut(s)	1961, 1979
XapI	RAATTY	1 cut(s)	52
XceI	RCATGY	4 cut(s)	545, 1783, 2101, 2364
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1899, 2076
XmaI	CCCGGG	1 cut(s)	518
XmiI	GTMKAC	2 cut(s)	96, 732
XspI	CTAG	2 cut(s)	1328, 1808
ZraI	GACGTC	1 cut(s)	348
Zsp2I	ATGCAT	1 cut(s)	1781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.