Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0010299

Physical Location & Seq

Genomic Coordinates Forward (+)

47668085 .. 47672367

Gene Structure 4283 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1360700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGGCGTCCAAGAACCCTAGTGACCCAGAGAAGGCGCCAAAAGGCACTAACGGCGCCGGCGACCATTACCCACATCACGATTTTCCAGAATCGGACGGTCACGAGCCATGCAAAATAGAGGAGGTGGCGCTGGTGGTGCCGGAGACCGACGACCCGACGATGCCGGTGATGACATTCAGGGCATGGTTCTTGGGGATAACTTCCTGTACTATCCTAATCTTCCTCAACACCTTCTTCACCTACCGCACGCAGCCGCTGGCGATCTCGGCCATTCTCATGCAGATTACTACTCTGCCCATCGGGAAGTTCATGGCCTCCGCTCTCCCCCGCCGCGAGCACAGCCTCCTTGGGTGGCGGTTCAGCCTCAACCCCGGGCCCTTCAACATAAAGGAGCATGTTATTATTACCATTTTTGCGAATTGTGGGATTTCTTACGGTGGGGGTGATGCCTACTCGATTGGCGCAATCACCATTATGAAGGCTTATTACAAGCAGAGCTTGAGCTTTATCCTTAGCCTCGTTATCGTCCTCACCACTCAGGTGATTGGGTATGGATGGGCTGGGATTCTCAGGAGGTACTTGGTCGACCCGGTGGAAATGTGGTGGCCTTCCAACGTTGCTCAGGTTTCTCTGTTTAGAGCACTCCACGAAAAAGACCATAAAGCGAAAGGCCTTACCCGGATGCAGTTTTTCCTCATTGCCTTGACAGCAAGCTTTCTCTACTATGCACTCCCTGGCTATCTTTTCCCCATCTTGACGTTCTTCTCATGGGTCTGCTGGGCTTGGCCACACAGTATCACAGCTCAGCAGATAGGCTCAGGTTACAATGGACTTGGTGTTGGTGCCTTCACCCTCGATTGGGCTGGGATTTCTGCTTATCACGGCAGCCCCCTCGTCACGCCATGGACTTCCATTCTCAATGTTGGGGTTGGATTTGTCATCTTCATCTACATCATTATGCCTCTTTGTTACTGGAAGTTTAACACTTTCGATGCTCAGACGTTCCCTATATTTTCCAACAAGCTCTTCACTTCTACTGGGCATAAATACGACACTACCAAGATCTTAACACCCCAGTTTGATCTTAATATTGATGCCTATAATAGTTACGGCAAGCTTTATCTTAGCCCCCTTTTCGCTTTGTCCATTGGATCAGGATTTGCAAGATTTACTGCAACCCTCGTTCATGTGGCACTGTTTCACGGAAGTGCTATTTTGAAGCAAAGCAAATCGGCAATGAAGAATGCGAAAATGGATATCCATGAGAAATTGATGAAAAATTACAAACAAGTGCCTGAGTGGTGGTTCCTTGTTTTGTTAACGGTGAGCATCATCCTGTCCTTGGTGATGTCTTTTGTGTGGAAAGAAACTGTGCAGCTGCCATGGTGGGGTTTGCTGTTTGCCTTTGTCTTGTCTTTTATCGTAACCCTCCCTGTTGGAGTCATTCAAGCTACCACTAACCAACAACCTGGATTTGATATCATAGCACAATTCATGATTGGGTATGTTCTACCAGGAAAACCAATTGCAAACTTGCTTTTCAAAATTTATGGACGAATCAGCACTGTCCACGCTCTTTCTTTCCTGTCTGACCTCAAACTTGGGCACTATATGAAGATTCCACCTCGGTGCATGTACACTGCTCAGCTGGTGGGAACTCTAGTTTCCGGTGTTGTGAACCTTGCAGTTGCATGGTGGATGCTGGAAAGCATCGACAACATATGCGATGTTGAATCCCAAAATCCAAACAGCCCGTGGACTTGTCCTAAATACAGAGTCACCTTCGATGCTTCTGTTATATGGGGTCTGATTGGACCAAGGCGACTGTTTGGACCTGGAGGATTGTATAGGAACTTGGTGTGGCTATTCCTTGTTGGAGTTTTCTTGCCAGTTCCAATCTGGGTAATGAGCAAAATCTTCCCAGACAAGAAATGGATTCCCTTGATCAACATGCCAGTCATCCTTTATGGCTTTGCGGGGATGCCACCTGCAACTCCCACTAACATAGCAAGCTGGCTTATCACTGGAGGTATCTTCAACTACTTTGTGTTCAAATACCACAAGCGCTGGTGGCAGAAATACAACTACGTCCTGTCTGCAGCGTTGGATGCTGGTACAGCTTTCATGGGCGTCCTCCTCTTCTTCGCCTTGCAGAATCCAAAGCACGAATTGAAATGGTGGGGGACTACACTCGATCATTGTCCTCTAGCGACATGCCCCATTGCACCAGGTATTCACGTTGACGGATGTCCAGTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006873 GO:0006875 GO:0008150 GO:0008324 GO:0009506 GO:0009987 GO:0010232 GO:0010233 GO:0015075 GO:0015318 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030054 GO:0032501 GO:0034220 GO:0042592 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0098655 GO:0098771 GO:1990388

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

754

Amino Acids

84.62

Weight (kDa)

9.07

Isoelectric Point (pI)

36.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	57 - 716	8e-172	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16370
fragaria_vesca	FvH4_3g00400 FvH4_3g00400
malus_domestica	MD00G1163400.v1.1 MD05G1360700.v1.1 MD08G1191400.v1.1
prunus_persica	Prupe.4G004600_v2.0.a1 Prupe.4G004600_v2.0.a1
pyrus_communis	pycom05g32750 pycom08g16500 pycom10g28800
rosa_chinensis	RchiOBHm_Chr5g0000601
rosa_laevigata	RLG00000030879
rosa_multiflora	Rmu_sc0003699.1_g000006
rosa_roxburghii	Rroxscaffold_1G00075610
rosa_rugosa	Rorug04G0385400
rosa_samantha	Rh5AG005000 Rh5BG006500 Rh5CG005400 Rh5DG005300
rosa_wichuraiana	Rw5G000490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1996
Acc36I	ACCTGC	1 cut(s)	1996
AccB1I	GGYRCC	4 cut(s)	34, 53, 136, 842
AccBSI	CCGCTC	1 cut(s)	320
AccI	GTMKAC	1 cut(s)	585
AccII	CGCG	1 cut(s)	333
AciI	CCGC	7 cut(s)	244, 254, 318, 328, 331, 355, 1976
AclI	AACGTT	1 cut(s)	615
AclWI	GGATC	1 cut(s)	1159
AcoI	YGGCCR	2 cut(s)	267, 785
AcsI	RAATTY	1 cut(s)	1545
AcyI	GRCGYC	4 cut(s)	5, 35, 54, 2130
AfaI	GTAC	4 cut(s)	208, 578, 1637, 2116
AfeI	AGCGCT	1 cut(s)	2066
AfiI	CCNNNNNNNGG	5 cut(s)	31, 858, 859, 1342, 1388
AgsI	TTSAA	8 cut(s)	382, 1219, 1448, 1543, 1733, 2038, 2053, 2173
AjnI	CCWGG	5 cut(s)	733, 1468, 1513, 1834, 2227
AjuI	GAANNNNNNNTTGG	2 cut(s)	1010, 1042
AleI	CACNNNNGTG	3 cut(s)	539, 1206, 1627
Alw21I	GWGCWC	2 cut(s)	339, 643
Alw26I	GTCTC	1 cut(s)	137
AlwI	GGATC	1 cut(s)	1159
AlwNI	CAGNNNCTG	1 cut(s)	256
Ama87I	CYCGRG	1 cut(s)	371
Aor51HI	AGCGCT	1 cut(s)	2066
AoxI	GGCC	6 cut(s)	267, 312, 374, 605, 670, 785
ApaI	GGGCCC	1 cut(s)	378
ApeKI	GCWGC	5 cut(s)	250, 885, 1375, 1378, 2099
ApoI	RAATTY	1 cut(s)	1545
AspLEI	GCGC	5 cut(s)	37, 56, 130, 464, 2067
AspS9I	GGNCC	4 cut(s)	374, 375, 1814, 1832
AsuC2I	CCSGG	4 cut(s)	372, 373, 590, 679
AvaI	CYCGRG	1 cut(s)	371
AvaII	GGWCC	2 cut(s)	1814, 1832
BaeGI	GKGCMC	2 cut(s)	378, 1608
BalI	TGGCCA	1 cut(s)	787
BanI	GGYRCC	4 cut(s)	34, 53, 136, 842
BanII	GRGCYC	1 cut(s)	378
BarI	GAAGNNNNNNTAC	2 cut(s)	470, 502
BauI	CACGAG	1 cut(s)	101
Bbv12I	GWGCWC	2 cut(s)	339, 643
BbvI	GCAGC	5 cut(s)	262, 897, 1365, 1387, 2111
BccI	CCATC	3 cut(s)	305, 549, 758
BceAI	ACGGC	3 cut(s)	67, 898, 1126
BcgI	CGANNNNNNTGC	2 cut(s)	874, 908
BciT130I	CCWGG	5 cut(s)	735, 1470, 1515, 1836, 2229
BclI	TGATCA	1 cut(s)	1944
BcnI	CCSGG	4 cut(s)	372, 373, 590, 679
BcoDI	GTCTC	1 cut(s)	137
BfaI	CTAG	3 cut(s)	18, 1661, 2207
BfmI	CTRYAG	1 cut(s)	2097
BfoI	RGCGCY	4 cut(s)	38, 57, 131, 2068
BfuAI	ACCTGC	1 cut(s)	1996
BglII	AGATCT	1 cut(s)	1062
BisI	GCNGC	7 cut(s)	251, 254, 331, 886, 1376, 1379, 2100
BlpI	GCTNAGC	2 cut(s)	804, 1644
BlsI	GCNGC	7 cut(s)	252, 255, 332, 887, 1377, 1380, 2101
Bme1390I	CCNGG	9 cut(s)	372, 373, 590, 679, 735, 1470, 1515, 1836, 2229
Bme18I	GGWCC	2 cut(s)	1814, 1832
BmeT110I	CYCGRG	1 cut(s)	371
BmgT120I	GGNCC	4 cut(s)	374, 375, 1814, 1832
BmiI	GGNNCC	6 cut(s)	36, 55, 138, 376, 844, 1307
BmrFI	CCNGG	9 cut(s)	372, 373, 590, 679, 735, 1470, 1515, 1836, 2229
BmrI	ACTGGG	2 cut(s)	1047, 1069
BmuI	ACTGGG	2 cut(s)	1047, 1069
BoxI	GACNNNNGTC	1 cut(s)	2247
BpmI	CTGGAG	2 cut(s)	1857, 2046
Bpu10I	CCTNAGC	3 cut(s)	512, 621, 817
Bpu1102I	GCTNAGC	2 cut(s)	804, 1644
BpuEI	CTTGAG	1 cut(s)	520
BpuMI	CCSGG	4 cut(s)	372, 373, 590, 679
BsaHI	GRCGYC	4 cut(s)	5, 35, 54, 2130
BsaI	GGTCTC	1 cut(s)	137
BsaWI	WCCGGW	1 cut(s)	1667
Bsc4I	CCNNNNNNNGG	5 cut(s)	31, 858, 859, 1342, 1388
Bse118I	RCCGGY	2 cut(s)	56, 163
Bse1I	ACTGG	7 cut(s)	977, 1042, 1075, 1889, 1955, 2029, 2252
Bse3DI	GCAATG	3 cut(s)	696, 1242, 2220
BseBI	CCWGG	5 cut(s)	735, 1470, 1515, 1836, 2229
BseGI	GGATG	8 cut(s)	560, 687, 1332, 1704, 1959, 1986, 2113, 2252
BseLI	CCNNNNNNNGG	5 cut(s)	31, 858, 859, 1342, 1388
BseMI	GCAATG	3 cut(s)	696, 1242, 2220
BseMII	CTCAG	8 cut(s)	551, 583, 635, 818, 831, 1010, 1287, 1658
BseNI	ACTGG	7 cut(s)	977, 1042, 1075, 1889, 1955, 2029, 2252
BseRI	GAGGAG	2 cut(s)	134, 2126
BseSI	GKGCMC	2 cut(s)	378, 1608
BseXI	GCAGC	5 cut(s)	262, 897, 1365, 1387, 2111
BseYI	CCCAGC	3 cut(s)	560, 777, 863
BsgI	GTGCAG	1 cut(s)	1394
Bsh1236I	CGCG	1 cut(s)	333
BshFI	GGCC	6 cut(s)	269, 314, 376, 607, 672, 787
BshNI	GGYRCC	4 cut(s)	34, 53, 136, 842
BsiHKAI	GWGCWC	2 cut(s)	339, 643
BsiHKCI	CYCGRG	1 cut(s)	371
BsiSI	CCGG	7 cut(s)	57, 140, 164, 372, 590, 679, 1668
BslFI	GGGAC	1 cut(s)	2197
BslI	CCNNNNNNNGG	5 cut(s)	31, 858, 859, 1342, 1388
BsmAI	GTCTC	1 cut(s)	137
BsmFI	GGGAC	1 cut(s)	2197
BsmI	GAATGC	1 cut(s)	1249
BsnI	GGCC	6 cut(s)	269, 314, 376, 607, 672, 787
Bso31I	GGTCTC	1 cut(s)	137
BsoBI	CYCGRG	1 cut(s)	371
Bsp120I	GGGCCC	1 cut(s)	374
Bsp1286I	GDGCHC	4 cut(s)	339, 378, 643, 1608
Bsp1407I	TGTACA	1 cut(s)	1635
Bsp143I	GATC	6 cut(s)	261, 1062, 1081, 1151, 1944, 2194
Bsp1720I	GCTNAGC	2 cut(s)	804, 1644
Bsp19I	CCATGG	2 cut(s)	902, 1382
BspACI	CCGC	7 cut(s)	244, 254, 318, 328, 331, 355, 1976
BspANI	GGCC	6 cut(s)	269, 314, 376, 607, 672, 787
BspCNI	CTCAG	8 cut(s)	550, 582, 634, 817, 830, 1009, 1288, 1657
BspFNI	CGCG	1 cut(s)	333
BspHI	TCATGA	1 cut(s)	1494
BspLI	GGNNCC	6 cut(s)	36, 55, 138, 376, 844, 1307
BspMAI	CTGCAG	1 cut(s)	2101
BspMI	ACCTGC	1 cut(s)	1996
BspPI	GGATC	1 cut(s)	1159
BspQI	GCTCTTC	1 cut(s)	1031
BspT107I	GGYRCC	4 cut(s)	34, 53, 136, 842
BspTNI	GGTCTC	1 cut(s)	137
BsrBI	CCGCTC	1 cut(s)	320
BsrDI	GCAATG	3 cut(s)	696, 1242, 2220
BsrFI	RCCGGY	2 cut(s)	56, 163
BsrGI	TGTACA	1 cut(s)	1635
BsrI	ACTGG	7 cut(s)	977, 1042, 1075, 1889, 1955, 2029, 2252
BssAI	RCCGGY	2 cut(s)	56, 163
BssMI	GATC	6 cut(s)	261, 1062, 1081, 1151, 1944, 2194
BssNI	GRCGYC	4 cut(s)	5, 35, 54, 2130
BssSI	CACGAG	1 cut(s)	101
BssT1I	CCWWGG	5 cut(s)	346, 902, 1341, 1382, 1817
Bst2BI	CACGAG	1 cut(s)	101
Bst2UI	CCWGG	5 cut(s)	735, 1470, 1515, 1836, 2229
Bst4CI	ACNGT	8 cut(s)	98, 437, 794, 1197, 1324, 1372, 1567, 1827
Bst6I	CTCTTC	2 cut(s)	1031, 2144
BstACI	GRCGYC	4 cut(s)	5, 35, 54, 2130
BstAUI	TGTACA	1 cut(s)	1635
BstC8I	GCNNGC	8 cut(s)	58, 248, 258, 335, 712, 1115, 2011, 2015
BstDSI	CCRYGG	3 cut(s)	902, 1382, 1754
BstF5I	GGATG	8 cut(s)	560, 687, 1332, 1704, 1959, 1986, 2113, 2252
BstFNI	CGCG	1 cut(s)	333
BstH2I	RGCGCY	4 cut(s)	38, 57, 131, 2068
BstHHI	GCGC	5 cut(s)	37, 56, 130, 464, 2067
BstKTI	GATC	6 cut(s)	264, 1065, 1084, 1154, 1947, 2197
BstMAI	GTCTC	1 cut(s)	137
BstMBI	GATC	6 cut(s)	261, 1062, 1081, 1151, 1944, 2194
BstMWI	GCNNNNNNNGC	8 cut(s)	51, 136, 266, 339, 707, 2071, 2108, 2117
BstNI	CCWGG	5 cut(s)	735, 1470, 1515, 1836, 2229
BstNSI	RCATGY	4 cut(s)	398, 1636, 1954, 2217
BstPAI	GACNNNNGTC	1 cut(s)	2247
BstSCI	CCNGG	9 cut(s)	370, 371, 588, 677, 733, 1468, 1513, 1834, 2227
BstSFI	CTRYAG	1 cut(s)	2097
BstSLI	GKGCMC	2 cut(s)	378, 1608
BstUI	CGCG	1 cut(s)	333
BstV1I	GCAGC	5 cut(s)	262, 897, 1365, 1387, 2111
BstX2I	RGATCY	1 cut(s)	1062
BstXI	CCANNNNNNTGG	1 cut(s)	1469
BstYI	RGATCY	1 cut(s)	1062
BsuRI	GGCC	6 cut(s)	269, 314, 376, 607, 672, 787
BtgI	CCRYGG	3 cut(s)	902, 1382, 1754
BtgZI	GCGATG	1 cut(s)	1740
BtsCI	GGATG	8 cut(s)	560, 687, 1332, 1704, 1959, 1986, 2113, 2252
BtsI	GCAGTG	1 cut(s)	1638
BtsIMutI	CAGTG	4 cut(s)	1193, 1563, 1638, 2022
BveI	ACCTGC	1 cut(s)	1996
Cac8I	GCNNGC	8 cut(s)	58, 248, 258, 335, 712, 1115, 2011, 2015
CaiI	CAGNNNCTG	1 cut(s)	256
CciI	TCATGA	1 cut(s)	1494
CfoI	GCGC	5 cut(s)	37, 56, 130, 464, 2067
Cfr10I	RCCGGY	2 cut(s)	56, 163
Cfr13I	GGNCC	4 cut(s)	374, 375, 1814, 1832
Cfr9I	CCCGGG	1 cut(s)	371
CseI	GACGC	1 cut(s)	2119
CsiI	ACCWGGT	1 cut(s)	2227
Csp6I	GTAC	4 cut(s)	207, 577, 1636, 2115
CviQI	GTAC	4 cut(s)	207, 577, 1636, 2115
DinI	GGCGCC	2 cut(s)	36, 55
DpnI	GATC	6 cut(s)	263, 1064, 1083, 1153, 1946, 2196
DpnII	GATC	6 cut(s)	261, 1062, 1081, 1151, 1944, 2194
EaeI	YGGCCR	2 cut(s)	267, 785
Eam1104I	CTCTTC	2 cut(s)	1031, 2144
EarI	CTCTTC	2 cut(s)	1031, 2144
Eco130I	CCWWGG	5 cut(s)	346, 902, 1341, 1382, 1817
Eco147I	AGGCCT	1 cut(s)	672
Eco24I	GRGCYC	1 cut(s)	378
Eco31I	GGTCTC	1 cut(s)	137
Eco32I	GATATC	2 cut(s)	1258, 1480
Eco47I	GGWCC	2 cut(s)	1814, 1832
Eco47III	AGCGCT	1 cut(s)	2066
Eco88I	CYCGRG	1 cut(s)	371
EcoO109I	RGGNCCY	1 cut(s)	375
EcoRII	CCWGG	5 cut(s)	733, 1468, 1513, 1834, 2227
EcoRV	GATATC	2 cut(s)	1258, 1480
EcoT14I	CCWWGG	5 cut(s)	346, 902, 1341, 1382, 1817
EcoT38I	GRGCYC	1 cut(s)	378
EgeI	GGCGCC	2 cut(s)	36, 55
EheI	GGCGCC	2 cut(s)	36, 55
ErhI	CCWWGG	5 cut(s)	346, 902, 1341, 1382, 1817
FalI	AAGNNNNNCTT	2 cut(s)	482, 514
FaqI	GGGAC	1 cut(s)	2197
FauI	CCCGC	2 cut(s)	335, 1969
FauNDI	CATATG	1 cut(s)	1721
FbaI	TGATCA	1 cut(s)	1944
FblI	GTMKAC	1 cut(s)	585
Fnu4HI	GCNGC	7 cut(s)	251, 254, 331, 886, 1376, 1379, 2100
FokI	GGATG	7 cut(s)	567, 694, 1319, 1711, 1946, 1993, 2120
FriOI	GRGCYC	1 cut(s)	378
Fsp4HI	GCNGC	7 cut(s)	251, 254, 331, 886, 1376, 1379, 2100
FspBI	CTAG	3 cut(s)	18, 1661, 2207
GlaI	GCGC	5 cut(s)	36, 55, 129, 463, 2066
GluI	GCNGC	7 cut(s)	251, 254, 331, 886, 1376, 1379, 2100
GsaI	CCCAGC	3 cut(s)	564, 781, 867
GsuI	CTGGAG	2 cut(s)	1857, 2046
HaeII	RGCGCY	4 cut(s)	38, 57, 131, 2068
HaeIII	GGCC	6 cut(s)	269, 314, 376, 607, 672, 787
HapII	CCGG	7 cut(s)	57, 140, 164, 372, 590, 679, 1668
HgaI	GACGC	1 cut(s)	2119
HhaI	GCGC	5 cut(s)	37, 56, 130, 464, 2067
Hin1I	GRCGYC	4 cut(s)	5, 35, 54, 2130
Hin6I	GCGC	5 cut(s)	35, 54, 128, 462, 2065
HinP1I	GCGC	5 cut(s)	35, 54, 128, 462, 2065
HincII	GTYRAC	3 cut(s)	586, 1320, 2242
HindII	GTYRAC	3 cut(s)	586, 1320, 2242
HindIII	AAGCTT	2 cut(s)	712, 1115
HinfI	GANTC	9 cut(s)	89, 565, 1440, 1557, 1618, 1733, 1776, 1936, 2155
HpaI	GTTAAC	1 cut(s)	1320
HpaII	CCGG	7 cut(s)	57, 140, 164, 372, 590, 679, 1668
Hpy166II	GTNNAC	7 cut(s)	586, 1320, 1570, 1638, 1678, 1758, 2242
Hpy188I	TCNGA	4 cut(s)	94, 999, 1591, 1809
Hpy188III	TCNNGA	8 cut(s)	77, 86, 101, 301, 571, 754, 1155, 1495
Hpy8I	GTNNAC	7 cut(s)	586, 1320, 1570, 1638, 1678, 1758, 2242
Hpy99I	CGWCG	2 cut(s)	152, 160
HpyAV	CCTTC	7 cut(s)	25, 241, 388, 472, 618, 856, 1792
HpyCH4III	ACNGT	8 cut(s)	98, 437, 794, 1197, 1324, 1372, 1567, 1827
HpyCH4IV	ACGT	5 cut(s)	615, 758, 1001, 2088, 2238
HpyF10VI	GCNNNNNNNGC	8 cut(s)	51, 136, 266, 339, 707, 2071, 2108, 2117
HpySE526I	ACGT	5 cut(s)	615, 758, 1001, 2088, 2238
Hsp92I	GRCGYC	4 cut(s)	5, 35, 54, 2130
HspAI	GCGC	5 cut(s)	35, 54, 128, 462, 2065
KasI	GGCGCC	2 cut(s)	34, 53
KroI	GCCGGC	1 cut(s)	56
KroNI	GCCGGC	1 cut(s)	58
Ksp22I	TGATCA	1 cut(s)	1944
KspAI	GTTAAC	1 cut(s)	1320
Kzo9I	GATC	6 cut(s)	261, 1062, 1081, 1151, 1944, 2194
LguI	GCTCTTC	1 cut(s)	1031
LmnI	GCTCC	1 cut(s)	391
Lsp1109I	GCAGC	5 cut(s)	262, 897, 1365, 1387, 2111
MabI	ACCWGGT	1 cut(s)	2227
MaeI	CTAG	3 cut(s)	18, 1661, 2207
MaeII	ACGT	5 cut(s)	615, 758, 1001, 2088, 2238
MaeIII	GTNAC	8 cut(s)	20, 98, 821, 895, 968, 1106, 1423, 1777
MalI	GATC	6 cut(s)	263, 1064, 1083, 1153, 1946, 2196
MbiI	CCGCTC	1 cut(s)	320
MboI	GATC	6 cut(s)	261, 1062, 1081, 1151, 1944, 2194
MfeI	CAATTG	1 cut(s)	1524
MflI	RGATCY	1 cut(s)	1062
MhlI	GDGCHC	4 cut(s)	339, 378, 643, 1608
MlsI	TGGCCA	1 cut(s)	787
MluCI	AATT	7 cut(s)	418, 1268, 1279, 1490, 1524, 1545, 2168
MluNI	TGGCCA	1 cut(s)	787
Mly113I	GGCGCC	2 cut(s)	35, 54
MlyI	GAGTC	2 cut(s)	1449, 1785
MmeI	TCCRAC	6 cut(s)	636, 910, 1041, 1417, 1855, 2085
Mox20I	TGGCCA	1 cut(s)	787
MreI	CGCCGGCG	1 cut(s)	56
MroNI	GCCGGC	1 cut(s)	56
MscI	TGGCCA	1 cut(s)	787
MseI	TTAA	5 cut(s)	981, 1067, 1086, 1319, 2260
MslI	CAYNNNNRTG	6 cut(s)	275, 473, 539, 956, 1206, 1627
Msp20I	TGGCCA	1 cut(s)	787
MspA1I	CMGCKG	3 cut(s)	256, 1378, 1648
MspI	CCGG	7 cut(s)	57, 140, 164, 372, 590, 679, 1668
MspR9I	CCNGG	9 cut(s)	372, 373, 590, 679, 735, 1470, 1515, 1836, 2229
MunI	CAATTG	1 cut(s)	1524
Mva1269I	GAATGC	1 cut(s)	1249
MvaI	CCWGG	5 cut(s)	735, 1470, 1515, 1836, 2229
MvnI	CGCG	1 cut(s)	333
MwoI	GCNNNNNNNGC	8 cut(s)	51, 136, 266, 339, 707, 2071, 2108, 2117
NaeI	GCCGGC	1 cut(s)	58
NarI	GGCGCC	2 cut(s)	35, 54
NciI	CCSGG	4 cut(s)	372, 373, 590, 679
NcoI	CCATGG	2 cut(s)	902, 1382
NdeI	CATATG	1 cut(s)	1721
NdeII	GATC	6 cut(s)	261, 1062, 1081, 1151, 1944, 2194
NgoMIV	GCCGGC	1 cut(s)	56
NlaIV	GGNNCC	6 cut(s)	36, 55, 138, 376, 844, 1307
NmeAIII	GCCGAG	1 cut(s)	245
NmuCI	GTSAC	4 cut(s)	20, 98, 895, 1777
NspI	RCATGY	4 cut(s)	398, 1636, 1954, 2217
OliI	CACNNNNGTG	3 cut(s)	539, 1206, 1627
PagI	TCATGA	1 cut(s)	1494
PaqCI	CACCTGC	1 cut(s)	1996
PceI	AGGCCT	1 cut(s)	672
PciSI	GCTCTTC	1 cut(s)	1031
PcsI	WCGNNNNNNNCGW	1 cut(s)	57
PctI	GAATGC	1 cut(s)	1249
PdiI	GCCGGC	1 cut(s)	58
PfeI	GAWTC	7 cut(s)	89, 565, 1557, 1618, 1733, 1936, 2155
PkrI	GCNGC	7 cut(s)	252, 255, 332, 887, 1377, 1380, 2101
PleI	GAGTC	2 cut(s)	1448, 1784
PluTI	GGCGCC	2 cut(s)	38, 57
PpsI	GAGTC	2 cut(s)	1448, 1784
PshAI	GACNNNNGTC	1 cut(s)	2247
Psp1406I	AACGTT	1 cut(s)	615
Psp6I	CCWGG	5 cut(s)	733, 1468, 1513, 1834, 2227
PspFI	CCCAGC	3 cut(s)	560, 777, 863
PspGI	CCWGG	5 cut(s)	733, 1468, 1513, 1834, 2227
PspN4I	GGNNCC	6 cut(s)	36, 55, 138, 376, 844, 1307
PspOMI	GGGCCC	1 cut(s)	374
PspPI	GGNCC	4 cut(s)	374, 375, 1814, 1832
PstI	CTGCAG	1 cut(s)	2101
PstNI	CAGNNNCTG	1 cut(s)	256
PsuI	RGATCY	1 cut(s)	1062
PvuII	CAGCTG	2 cut(s)	1378, 1648
RsaI	GTAC	4 cut(s)	208, 578, 1637, 2116
RsaNI	GTAC	4 cut(s)	207, 577, 1636, 2115
RseI	CAYNNNNRTG	6 cut(s)	275, 473, 539, 956, 1206, 1627
SalI	GTCGAC	1 cut(s)	584
SapI	GCTCTTC	1 cut(s)	1031
SaqAI	TTAA	5 cut(s)	981, 1067, 1086, 1319, 2260
SatI	GCNGC	7 cut(s)	251, 254, 331, 886, 1376, 1379, 2100
Sau3AI	GATC	6 cut(s)	261, 1062, 1081, 1151, 1944, 2194
Sau96I	GGNCC	4 cut(s)	374, 375, 1814, 1832
SchI	GAGTC	2 cut(s)	1449, 1785
ScrFI	CCNGG	9 cut(s)	372, 373, 590, 679, 735, 1470, 1515, 1836, 2229
SduI	GDGCHC	4 cut(s)	339, 378, 643, 1608
SexAI	ACCWGGT	1 cut(s)	2227
SfcI	CTRYAG	1 cut(s)	2097
SfoI	GGCGCC	2 cut(s)	36, 55
SgrAI	CRCCGGYG	1 cut(s)	56
SinI	GGWCC	2 cut(s)	1814, 1832
SmaI	CCCGGG	1 cut(s)	373
SmiMI	CAYNNNNRTG	6 cut(s)	275, 473, 539, 956, 1206, 1627
SmlI	CTYRAG	1 cut(s)	499
SmoI	CTYRAG	1 cut(s)	499
Sse9I	AATT	7 cut(s)	418, 1268, 1279, 1490, 1524, 1545, 2168
SseBI	AGGCCT	1 cut(s)	672
SsiI	CCGC	7 cut(s)	244, 254, 318, 328, 331, 355, 1976
SspDI	GGCGCC	2 cut(s)	34, 53
SspI	AATATT	1 cut(s)	1090
SspMI	CTAG	3 cut(s)	18, 1661, 2207
StuI	AGGCCT	1 cut(s)	672
StyD4I	CCNGG	9 cut(s)	370, 371, 588, 677, 733, 1468, 1513, 1834, 2227
StyI	CCWWGG	5 cut(s)	346, 902, 1341, 1382, 1817
TaaI	ACNGT	8 cut(s)	98, 437, 794, 1197, 1324, 1372, 1567, 1827
TaiI	ACGT	5 cut(s)	618, 761, 1004, 2091, 2241
TaqI	TCGA	7 cut(s)	455, 585, 855, 990, 1713, 1785, 2193
TaqII	GACCGA	1 cut(s)	161
TasI	AATT	7 cut(s)	418, 1268, 1279, 1490, 1524, 1545, 2168
TatI	WGTACW	2 cut(s)	206, 1635
TauI	GCSGC	2 cut(s)	256, 333
TfiI	GAWTC	7 cut(s)	89, 565, 1557, 1618, 1733, 1936, 2155
Tru1I	TTAA	5 cut(s)	981, 1067, 1086, 1319, 2260
Tru9I	TTAA	5 cut(s)	981, 1067, 1086, 1319, 2260
TscAI	CASTG	4 cut(s)	1200, 1570, 1645, 2029
TseFI	GTSAC	4 cut(s)	20, 98, 895, 1777
TseI	GCWGC	5 cut(s)	250, 885, 1375, 1378, 2099
Tsp45I	GTSAC	4 cut(s)	20, 98, 895, 1777
TspDTI	ATGAA	9 cut(s)	298, 491, 934, 1175, 1253, 1289, 1483, 1628, 2113
TspGWI	ACGGA	2 cut(s)	1218, 2259
TspMI	CCCGGG	1 cut(s)	371
TspRI	CASTG	4 cut(s)	1200, 1570, 1645, 2029
VpaK11BI	GGWCC	2 cut(s)	1814, 1832
XapI	RAATTY	1 cut(s)	1545
XceI	RCATGY	4 cut(s)	398, 1636, 1954, 2217
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1752, 1896, 1929
XmaI	CCCGGG	1 cut(s)	371
XmiI	GTMKAC	1 cut(s)	585
XspI	CTAG	3 cut(s)	18, 1661, 2207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.