Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0010299

Physical Location & Seq

Genomic Coordinates Reverse (-)

342904 .. 346418

Gene Structure 3515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG005300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGCGTCGAAAGTCGATCCCGAGAAGACCAACGGCGCTGACTCCGAGGAGGAGACCCGAACATGCGAAATCGAAGAGGTGGCGCTGGTGGTGCCGGAGACCGACGATCCTTCACTGCCGGTGATGACATTCCGGACTTGGTTCCTGGGCATCACCTCATGCACCATCCTCATATTCCTCAACACCTTTTTCAGCTACCGCACTCAGCCCCTCGCCATTTCCGCCATTCTCATGCAAATCGCTGTCTTGCCCATCGGAAAGTTCATGGCCAAAATTCTGCCCAACAAGGACTTCAATCTGATGGGCTTTAAGTTCAACTTGAATCCGGGGCCCTTCAACATGAAGGAGCATGTCGTCATCACCATTTTCGCCAATTGTGGGTTCTCAGGTGGCGGAGGTGATGCCTATTCCACCGGTGCCATCACCGTTATGAAGGCCTATTACCACCAGAGCTTGAGTTTTCTTTGTGGCCTCTTCATCGTCTTGACCTCTCAGATGATTGGGTATGGATGGGCTGGATTGCTGAGGAGGTACCTGGTTGACCCCGTTGAAATGTGGTGGCCTGCAAATGTTGCTCAGGTTTCTCTGTTTAGGGCACTCCATGAGAAGGAGCATAAAGCCAAAGGCATGACACGGATGAAATTTTTCCTGTTTGCCTTTGCAGCCAGCTTTTTCTATTATTTGTTCCCTGGCTATCTTTTCCAAATCTTGACATTCTTCTCATGGGTCTGCTGGGCATGGCCACACAGTATCACGGCTCAGCAAATCGGCTCAGGTTACAAGGGACTTGGGGTTGGTGCCTTTACCCTCGATTGGGCTGGCATTTCAGCTTATCACGGCAACCCCCTCGTCACACCTTGGGTTTCCATTCTCAACGTCGGAGTTGGTTTTGTCATCTTCATCTACATAATTCTCCCTCTGTGCTACTGGAAGTATAACACTTTTGATGCTCAAAAGTTTCCTATATTTTCCAACCAGCTATTCACCAATAAAGGCCTTAAATATGACACTACCAAGATCACGACACCACAATTAGAGCTTGACATTGCAGCTTATGATAATTATGGGAAGCTCTATCTTAGCCCTCTTTTCGCTTTATCCATTGGATCAGGATTTGCAAGATTTTCAGCAACTCTTATTCACGTGGCACTCTTTCATGGCGGTGCTATTTTGAAGCAAAGCAAATCAGCAGTGAATAATGCAAAAATGGATATCCATGAAAAATTGATGCAAAGCTACAAGCACGTGCCTGAATGGTGGTTCCTCATCATACTCCTTTTTAGCGTTGCCCTCTCCCTGCTCATGTCTTTTGTATGGAGAGAAACTGTGCAGCTGGCATGGTGGGGAATGATCTTCGCGTTTGTTTTGTCTTTCGTTGTCACTCTCCCAGTTGGGGTCATTCAAGCAACCACCAACCAACAACCTGGATTTGACATTATAGCACAGTTCATGATTGGTTATGTGCTCCCAGGAAAACCCATAGCAAACCTGCTTTTCAAAATCTATGGAAGAATCAGCACTGTCCATGCTCTCTCTTTCTTGTCTGACCTTAAACTCGGGGTCTATATGAAGATTCCACCTCGGTGCATGTACACAGCTCAGCTGGTGGGAACTCTGGTTTCTGGTGTTGTGAACCTTGCAGTTGCATGGTGGATGTTGGAGGGCATTGAGAACATATGCGACACTGAAGTACTCCCCACCGACAGTCCATGGACTTGTCCTAAATACAGAGTCACCTTTGATGCTTCTGTTATATGGGGCCTGATTGGACCAAGGCGACTGTTTGGACCTGGAGGACTGTATAGGAACTTGGTATGGCTATTTCTCGTCGGAGCTATCTTGCCAGTTCCTATTTGGGTGTTGAGCAAAATCTTCCCCGACAAGAAATGGATTCCGCTGATCAACATGCCAGTCATTCTTTACGGCTTTGCTGGGTTGCCACCAGCAACTCCCACCAACATAGCAAGCTGGCTCATCACTGGAGCTATCTTCAACTATTTCATCTTCAAATACCACAAGCGTTGGTGGCAGAAGTACAACTATGTTCTATCTGCAGCATTGGATGCCGGGACAGCTTTCATGGGTGTCTTAATCTTCTTTACGTTGCAGAACAACAACATTCTTGTCCATTGGTGGGGCAATGACCTTGATCATTGCCCTTTGGCATCATGCCCTACTGCACCAGGCATTGTAGTCAAAGGATGTCCGGTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006873 GO:0006875 GO:0008150 GO:0008324 GO:0009506 GO:0009987 GO:0010232 GO:0010233 GO:0015075 GO:0015318 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030054 GO:0032501 GO:0034220 GO:0042592 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055044 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071944 GO:0098655 GO:0098771 GO:1990388

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

738

Amino Acids

82.98

Weight (kDa)

8.89

Isoelectric Point (pI)

33.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	42 - 701	6.3e-170	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010299)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16370
fragaria_vesca	FvH4_3g00400 FvH4_3g00400
malus_domestica	MD00G1163400.v1.1 MD05G1360700.v1.1 MD08G1191400.v1.1
prunus_persica	Prupe.4G004600_v2.0.a1 Prupe.4G004600_v2.0.a1
pyrus_communis	pycom05g32750 pycom08g16500 pycom10g28800
rosa_chinensis	RchiOBHm_Chr5g0000601
rosa_laevigata	RLG00000030879
rosa_multiflora	Rmu_sc0003699.1_g000006
rosa_roxburghii	Rroxscaffold_1G00075610
rosa_rugosa	Rorug04G0385400
rosa_samantha	Rh5AG005000 Rh5BG006500 Rh5CG005400 Rh5DG005300
rosa_wichuraiana	Rw5G000490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1497
Acc65I	GGTACC	1 cut(s)	531
AccB1I	GGYRCC	4 cut(s)	91, 416, 531, 797
AccII	CGCG	1 cut(s)	1358
AccIII	TCCGGA	1 cut(s)	132
AciI	CCGC	5 cut(s)	199, 222, 393, 1161, 1895
AclWI	GGATC	3 cut(s)	11, 101, 1114
AcoI	YGGCCR	2 cut(s)	267, 740
AcsI	RAATTY	2 cut(s)	273, 641
AcuI	CTGAAG	1 cut(s)	1707
AcvI	CACGTG	2 cut(s)	1144, 1246
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	4 cut(s)	533, 1592, 1692, 2036
AfiI	CCNNNNNNNGG	6 cut(s)	378, 607, 813, 814, 1393, 2134
AgeI	ACCGGT	1 cut(s)	413
AjnI	CCWGG	7 cut(s)	144, 534, 688, 1423, 1468, 1789, 2182
AjuI	GAANNNNNNNTTGG	6 cut(s)	275, 307, 365, 397, 965, 997
AleI	CACNNNNGTG	1 cut(s)	1582
Alw21I	GWGCWC	1 cut(s)	1467
Alw26I	GTCTC	2 cut(s)	47, 92
AlwI	GGATC	3 cut(s)	11, 101, 1114
Ama87I	CYCGRG	2 cut(s)	20, 1556
Aor13HI	TCCGGA	1 cut(s)	132
AoxI	GGCC	8 cut(s)	267, 329, 435, 469, 560, 740, 994, 1759
ApaI	GGGCCC	1 cut(s)	333
ApeKI	GCWGC	4 cut(s)	662, 1049, 1330, 2054
ApoI	RAATTY	2 cut(s)	273, 641
AsiGI	ACCGGT	1 cut(s)	413
Asp700I	GAANNNNTTC	1 cut(s)	644
Asp718I	GGTACC	1 cut(s)	531
AspLEI	GCGC	2 cut(s)	38, 85
AspS9I	GGNCC	5 cut(s)	329, 330, 1759, 1769, 1787
AsuC2I	CCSGG	2 cut(s)	327, 2068
AsuHPI	GGTGA	7 cut(s)	133, 145, 352, 410, 415, 976, 1726
AvaI	CYCGRG	2 cut(s)	20, 1556
AvaII	GGWCC	2 cut(s)	1769, 1787
BaeGI	GKGCMC	2 cut(s)	333, 598
BalI	TGGCCA	2 cut(s)	269, 742
BanI	GGYRCC	4 cut(s)	91, 416, 531, 797
BanII	GRGCYC	1 cut(s)	333
BarI	GAAGNNNNNNTAC	2 cut(s)	425, 457
BbrPI	CACGTG	2 cut(s)	1144, 1246
BbsI	GAAGAC	1 cut(s)	32
Bbv12I	GWGCWC	1 cut(s)	1467
BbvCI	CCTCAGC	1 cut(s)	524
BbvI	GCAGC	4 cut(s)	674, 1061, 1342, 2066
BccI	CCATC	5 cut(s)	173, 260, 295, 428, 504
BceAI	ACGGC	4 cut(s)	49, 771, 853, 1939
BcgI	CGANNNNNNTGC	2 cut(s)	829, 863
BciT130I	CCWGG	7 cut(s)	146, 536, 690, 1425, 1470, 1791, 2184
BclI	TGATCA	2 cut(s)	1899, 2149
BcnI	CCSGG	2 cut(s)	327, 2068
BcoDI	GTCTC	2 cut(s)	47, 92
BfmI	CTRYAG	1 cut(s)	2052
BfoI	RGCGCY	2 cut(s)	39, 86
BfuAI	ACCTGC	1 cut(s)	1497
BisI	GCNGC	4 cut(s)	663, 1050, 1331, 2055
BlpI	GCTNAGC	2 cut(s)	759, 1599
BlsI	GCNGC	4 cut(s)	664, 1051, 1332, 2056
BmcAI	AGTACT	1 cut(s)	1692
Bme1390I	CCNGG	9 cut(s)	146, 327, 536, 690, 1425, 1470, 1791, 2068, 2184
Bme18I	GGWCC	2 cut(s)	1769, 1787
BmeT110I	CYCGRG	2 cut(s)	20, 1556
BmgT120I	GGNCC	5 cut(s)	329, 330, 1759, 1769, 1787
BmiI	GGNNCC	9 cut(s)	93, 143, 330, 331, 418, 533, 799, 1262, 1760
BmrFI	CCNGG	9 cut(s)	146, 327, 536, 690, 1425, 1470, 1791, 2068, 2184
BmrI	ACTGGG	1 cut(s)	1382
BmsI	GCATC	7 cut(s)	159, 391, 937, 1218, 1732, 2053, 2174
BmuI	ACTGGG	1 cut(s)	1382
BpiI	GAAGAC	1 cut(s)	32
BpmI	CTGGAG	2 cut(s)	1812, 2001
Bpu10I	CCTNAGC	3 cut(s)	524, 576, 772
Bpu1102I	GCTNAGC	2 cut(s)	759, 1599
BpuEI	CTTGAG	1 cut(s)	475
BpuMI	CCSGG	2 cut(s)	327, 2068
BsaAI	YACGTR	2 cut(s)	1144, 1246
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	47, 92
BsaJI	CCNNGG	9 cut(s)	45, 145, 326, 688, 857, 1468, 1580, 1709, 1772
BsaWI	WCCGGW	3 cut(s)	132, 413, 2206
Bsc4I	CCNNNNNNNGG	6 cut(s)	378, 607, 813, 814, 1393, 2134
Bse118I	RCCGGY	2 cut(s)	118, 413
Bse1I	ACTGG	5 cut(s)	932, 1388, 1844, 1910, 1984
Bse3DI	GCAATG	3 cut(s)	1044, 2146, 2152
BseAI	TCCGGA	1 cut(s)	132
BseBI	CCWGG	7 cut(s)	146, 536, 690, 1425, 1470, 1791, 2184
BseDI	CCNNGG	9 cut(s)	45, 145, 326, 688, 857, 1468, 1580, 1709, 1772
BseGI	GGATG	6 cut(s)	165, 515, 642, 1659, 2068, 2207
BseLI	CCNNNNNNNGG	6 cut(s)	378, 607, 813, 814, 1393, 2134
BseMI	GCAATG	3 cut(s)	1044, 2146, 2152
BseMII	CTCAG	8 cut(s)	218, 399, 506, 515, 590, 773, 786, 1613
BseNI	ACTGG	5 cut(s)	932, 1388, 1844, 1910, 1984
BseRI	GAGGAG	3 cut(s)	62, 65, 541
BseSI	GKGCMC	2 cut(s)	333, 598
BseXI	GCAGC	4 cut(s)	674, 1061, 1342, 2066
BseYI	CCCAGC	2 cut(s)	732, 1931
BsgI	GTGCAG	2 cut(s)	1349, 2163
Bsh1236I	CGCG	1 cut(s)	1358
BshFI	GGCC	8 cut(s)	269, 331, 437, 471, 562, 742, 996, 1761
BshNI	GGYRCC	4 cut(s)	91, 416, 531, 797
BshTI	ACCGGT	1 cut(s)	413
BsiHKAI	GWGCWC	1 cut(s)	1467
BsiHKCI	CYCGRG	2 cut(s)	20, 1556
BsiSI	CCGG	7 cut(s)	95, 119, 133, 326, 414, 2067, 2207
BslFI	GGGAC	2 cut(s)	798, 2083
BslI	CCNNNNNNNGG	6 cut(s)	378, 607, 813, 814, 1393, 2134
BsmAI	GTCTC	2 cut(s)	47, 92
BsmFI	GGGAC	2 cut(s)	798, 2083
BsnI	GGCC	8 cut(s)	269, 331, 437, 471, 562, 742, 996, 1761
Bso31I	GGTCTC	2 cut(s)	47, 92
BsoBI	CYCGRG	2 cut(s)	20, 1556
Bsp120I	GGGCCC	1 cut(s)	329
Bsp1286I	GDGCHC	3 cut(s)	333, 598, 1467
Bsp13I	TCCGGA	1 cut(s)	132
Bsp1407I	TGTACA	1 cut(s)	1590
Bsp143I	GATC	7 cut(s)	16, 106, 1017, 1106, 1350, 1899, 2149
Bsp1720I	GCTNAGC	2 cut(s)	759, 1599
Bsp19I	CCATGG	1 cut(s)	1709
BspACI	CCGC	5 cut(s)	199, 222, 393, 1161, 1895
BspANI	GGCC	8 cut(s)	269, 331, 437, 471, 562, 742, 996, 1761
BspCNI	CTCAG	8 cut(s)	217, 398, 505, 516, 589, 772, 785, 1612
BspEI	TCCGGA	1 cut(s)	132
BspFNI	CGCG	1 cut(s)	1358
BspHI	TCATGA	1 cut(s)	1449
BspLI	GGNNCC	9 cut(s)	93, 143, 330, 331, 418, 533, 799, 1262, 1760
BspMAI	CTGCAG	1 cut(s)	2056
BspMI	ACCTGC	1 cut(s)	1497
BspPI	GGATC	3 cut(s)	11, 101, 1114
BspT107I	GGYRCC	4 cut(s)	91, 416, 531, 797
BspTNI	GGTCTC	2 cut(s)	47, 92
BsrDI	GCAATG	3 cut(s)	1044, 2146, 2152
BsrFI	RCCGGY	2 cut(s)	118, 413
BsrGI	TGTACA	1 cut(s)	1590
BsrI	ACTGG	5 cut(s)	932, 1388, 1844, 1910, 1984
BssAI	RCCGGY	2 cut(s)	118, 413
BssECI	CCNNGG	9 cut(s)	45, 145, 326, 688, 857, 1468, 1580, 1709, 1772
BssMI	GATC	7 cut(s)	16, 106, 1017, 1106, 1350, 1899, 2149
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	3 cut(s)	857, 1709, 1772
Bst2UI	CCWGG	7 cut(s)	146, 536, 690, 1425, 1470, 1791, 2184
Bst4CI	ACNGT	8 cut(s)	427, 749, 1327, 1446, 1522, 1706, 1782, 1800
Bst6I	CTCTTC	2 cut(s)	69, 479
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	2 cut(s)	572, 2063
BstAUI	TGTACA	1 cut(s)	1590
BstBAI	YACGTR	2 cut(s)	1144, 1246
BstC8I	GCNNGC	6 cut(s)	564, 667, 820, 1335, 1966, 1970
BstDEI	CTNAG	9 cut(s)	204, 385, 492, 524, 576, 759, 772, 1079, 1599
BstDSI	CCRYGG	1 cut(s)	1709
BstF5I	GGATG	6 cut(s)	165, 515, 642, 1659, 2068, 2207
BstFNI	CGCG	1 cut(s)	1358
BstH2I	RGCGCY	2 cut(s)	39, 86
BstHHI	GCGC	2 cut(s)	38, 85
BstKTI	GATC	7 cut(s)	19, 109, 1020, 1109, 1353, 1902, 2152
BstMAI	GTCTC	2 cut(s)	47, 92
BstMBI	GATC	7 cut(s)	16, 106, 1017, 1106, 1350, 1899, 2149
BstMWI	GCNNNNNNNGC	7 cut(s)	91, 221, 572, 662, 2026, 2063, 2072
BstNI	CCWGG	7 cut(s)	146, 536, 690, 1425, 1470, 1791, 2184
BstNSI	RCATGY	4 cut(s)	66, 353, 1591, 1909
BstSCI	CCNGG	9 cut(s)	144, 325, 534, 688, 1423, 1468, 1789, 2066, 2182
BstSFI	CTRYAG	1 cut(s)	2052
BstSLI	GKGCMC	2 cut(s)	333, 598
BstUI	CGCG	1 cut(s)	1358
BstV1I	GCAGC	4 cut(s)	674, 1061, 1342, 2066
BstV2I	GAAGAC	1 cut(s)	32
BstXI	CCANNNNNNTGG	1 cut(s)	1424
BsuRI	GGCC	8 cut(s)	269, 331, 437, 471, 562, 742, 996, 1761
BtgI	CCRYGG	1 cut(s)	1709
BtsCI	GGATG	6 cut(s)	165, 515, 642, 1659, 2068, 2207
BtsI	GCAGTG	2 cut(s)	113, 1197
BtsIMutI	CAGTG	5 cut(s)	113, 1197, 1518, 1683, 1977
BveI	ACCTGC	1 cut(s)	1497
Cac8I	GCNNGC	6 cut(s)	564, 667, 820, 1335, 1966, 1970
CciI	TCATGA	1 cut(s)	1449
CfoI	GCGC	2 cut(s)	38, 85
Cfr10I	RCCGGY	2 cut(s)	118, 413
Cfr13I	GGNCC	5 cut(s)	329, 330, 1759, 1769, 1787
CsiI	ACCWGGT	1 cut(s)	534
Csp6I	GTAC	4 cut(s)	532, 1591, 1691, 2035
CspAI	ACCGGT	1 cut(s)	413
CspCI	CAANNNNNGTGG	2 cut(s)	2003, 2038
CviQI	GTAC	4 cut(s)	532, 1591, 1691, 2035
DdeI	CTNAG	9 cut(s)	204, 385, 492, 524, 576, 759, 772, 1079, 1599
DpnI	GATC	7 cut(s)	18, 108, 1019, 1108, 1352, 1901, 2151
DpnII	GATC	7 cut(s)	16, 106, 1017, 1106, 1350, 1899, 2149
EaeI	YGGCCR	2 cut(s)	267, 740
Eam1104I	CTCTTC	2 cut(s)	69, 479
EarI	CTCTTC	2 cut(s)	69, 479
EciI	GGCGGA	2 cut(s)	211, 408
Eco130I	CCWWGG	3 cut(s)	857, 1709, 1772
Eco147I	AGGCCT	2 cut(s)	437, 996
Eco24I	GRGCYC	1 cut(s)	333
Eco31I	GGTCTC	2 cut(s)	47, 92
Eco32I	GATATC	1 cut(s)	1213
Eco47I	GGWCC	2 cut(s)	1769, 1787
Eco57I	CTGAAG	1 cut(s)	1707
Eco72I	CACGTG	2 cut(s)	1144, 1246
Eco88I	CYCGRG	2 cut(s)	20, 1556
EcoO109I	RGGNCCY	3 cut(s)	329, 330, 1759
EcoRII	CCWGG	7 cut(s)	144, 534, 688, 1423, 1468, 1789, 2182
EcoRV	GATATC	1 cut(s)	1213
EcoT14I	CCWWGG	3 cut(s)	857, 1709, 1772
EcoT38I	GRGCYC	1 cut(s)	333
ErhI	CCWWGG	3 cut(s)	857, 1709, 1772
FalI	AAGNNNNNCTT	2 cut(s)	302, 334
FaqI	GGGAC	2 cut(s)	798, 2083
FauNDI	CATATG	1 cut(s)	1676
FbaI	TGATCA	2 cut(s)	1899, 2149
Fnu4HI	GCNGC	4 cut(s)	663, 1050, 1331, 2055
FokI	GGATG	5 cut(s)	152, 522, 649, 1666, 2075
FriOI	GRGCYC	1 cut(s)	333
Fsp4HI	GCNGC	4 cut(s)	663, 1050, 1331, 2055
GlaI	GCGC	2 cut(s)	37, 84
GluI	GCNGC	4 cut(s)	663, 1050, 1331, 2055
GsaI	CCCAGC	2 cut(s)	736, 1935
GsuI	CTGGAG	2 cut(s)	1812, 2001
HaeII	RGCGCY	2 cut(s)	39, 86
HaeIII	GGCC	8 cut(s)	269, 331, 437, 471, 562, 742, 996, 1761
HapII	CCGG	7 cut(s)	95, 119, 133, 326, 414, 2067, 2207
HhaI	GCGC	2 cut(s)	38, 85
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	2 cut(s)	36, 83
HinP1I	GCGC	2 cut(s)	36, 83
HincII	GTYRAC	1 cut(s)	541
HindII	GTYRAC	1 cut(s)	541
HinfI	GANTC	6 cut(s)	41, 322, 1512, 1573, 1731, 1891
HpaII	CCGG	7 cut(s)	95, 119, 133, 326, 414, 2067, 2207
HphI	GGTGA	7 cut(s)	133, 145, 352, 410, 415, 976, 1726
Hpy166II	GTNNAC	3 cut(s)	541, 1593, 1633
Hpy188I	TCNGA	7 cut(s)	46, 257, 300, 495, 881, 1546, 1832
Hpy188III	TCNNGA	7 cut(s)	20, 133, 484, 709, 1021, 1110, 1450
Hpy8I	GTNNAC	3 cut(s)	541, 1593, 1633
Hpy99I	CGWCG	4 cut(s)	10, 107, 881, 1832
HpyAV	CCTTC	5 cut(s)	120, 337, 343, 427, 601
HpyCH4III	ACNGT	8 cut(s)	427, 749, 1327, 1446, 1522, 1706, 1782, 1800
HpyCH4IV	ACGT	4 cut(s)	876, 1143, 1245, 2102
HpyF10VI	GCNNNNNNNGC	7 cut(s)	91, 221, 572, 662, 2026, 2063, 2072
HpyF3I	CTNAG	9 cut(s)	204, 385, 492, 524, 576, 759, 772, 1079, 1599
HpySE526I	ACGT	4 cut(s)	876, 1143, 1245, 2102
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	2 cut(s)	36, 83
Kpn2I	TCCGGA	1 cut(s)	132
KpnI	GGTACC	1 cut(s)	535
Ksp22I	TGATCA	2 cut(s)	1899, 2149
Kzo9I	GATC	7 cut(s)	16, 106, 1017, 1106, 1350, 1899, 2149
LmnI	GCTCC	5 cut(s)	346, 610, 1470, 1832, 1982
Lsp1109I	GCAGC	4 cut(s)	674, 1061, 1342, 2066
LweI	GCATC	7 cut(s)	159, 391, 937, 1218, 1732, 2053, 2174
MabI	ACCWGGT	1 cut(s)	534
MaeII	ACGT	4 cut(s)	876, 1143, 1245, 2102
MaeIII	GTNAC	4 cut(s)	776, 850, 1378, 1732
MalI	GATC	7 cut(s)	18, 108, 1019, 1108, 1352, 1901, 2151
MboI	GATC	7 cut(s)	16, 106, 1017, 1106, 1350, 1899, 2149
MfeI	CAATTG	1 cut(s)	373
MhlI	GDGCHC	3 cut(s)	333, 598, 1467
MlsI	TGGCCA	2 cut(s)	269, 742
MluCI	AATT	7 cut(s)	273, 373, 641, 909, 1031, 1060, 1223
MluNI	TGGCCA	2 cut(s)	269, 742
MlyI	GAGTC	2 cut(s)	35, 1740
MmeI	TCCRAC	4 cut(s)	859, 996, 1638, 1810
Mox20I	TGGCCA	2 cut(s)	269, 742
MroI	TCCGGA	1 cut(s)	132
MroXI	GAANNNNTTC	1 cut(s)	644
MscI	TGGCCA	2 cut(s)	269, 742
MseI	TTAA	5 cut(s)	309, 999, 1551, 2090, 2215
MslI	CAYNNNNRTG	4 cut(s)	230, 428, 1161, 1582
Msp20I	TGGCCA	2 cut(s)	269, 742
MspA1I	CMGCKG	3 cut(s)	1333, 1603, 1897
MspI	CCGG	7 cut(s)	95, 119, 133, 326, 414, 2067, 2207
MspR9I	CCNGG	9 cut(s)	146, 327, 536, 690, 1425, 1470, 1791, 2068, 2184
MunI	CAATTG	1 cut(s)	373
MvaI	CCWGG	7 cut(s)	146, 536, 690, 1425, 1470, 1791, 2184
MvnI	CGCG	1 cut(s)	1358
MwoI	GCNNNNNNNGC	7 cut(s)	91, 221, 572, 662, 2026, 2063, 2072
NciI	CCSGG	2 cut(s)	327, 2068
NcoI	CCATGG	1 cut(s)	1709
NdeI	CATATG	1 cut(s)	1676
NdeII	GATC	7 cut(s)	16, 106, 1017, 1106, 1350, 1899, 2149
NlaIV	GGNNCC	9 cut(s)	93, 143, 330, 331, 418, 533, 799, 1262, 1760
NmuCI	GTSAC	3 cut(s)	850, 1378, 1732
NspI	RCATGY	4 cut(s)	66, 353, 1591, 1909
OliI	CACNNNNGTG	1 cut(s)	1582
PagI	TCATGA	1 cut(s)	1449
PceI	AGGCCT	2 cut(s)	437, 996
PdmI	GAANNNNTTC	1 cut(s)	644
PfeI	GAWTC	4 cut(s)	322, 1512, 1573, 1891
PinAI	ACCGGT	1 cut(s)	413
PkrI	GCNGC	4 cut(s)	664, 1051, 1332, 2056
PleI	GAGTC	2 cut(s)	35, 1739
PmaCI	CACGTG	2 cut(s)	1144, 1246
PmlI	CACGTG	2 cut(s)	1144, 1246
PpsI	GAGTC	2 cut(s)	35, 1739
Ppu21I	YACGTR	2 cut(s)	1144, 1246
Psp6I	CCWGG	7 cut(s)	144, 534, 688, 1423, 1468, 1789, 2182
PspCI	CACGTG	2 cut(s)	1144, 1246
PspFI	CCCAGC	2 cut(s)	732, 1931
PspGI	CCWGG	7 cut(s)	144, 534, 688, 1423, 1468, 1789, 2182
PspN4I	GGNNCC	9 cut(s)	93, 143, 330, 331, 418, 533, 799, 1262, 1760
PspOMI	GGGCCC	1 cut(s)	329
PspPI	GGNCC	5 cut(s)	329, 330, 1759, 1769, 1787
PstI	CTGCAG	1 cut(s)	2056
PvuII	CAGCTG	2 cut(s)	1333, 1603
RsaI	GTAC	4 cut(s)	533, 1592, 1692, 2036
RsaNI	GTAC	4 cut(s)	532, 1591, 1691, 2035
RseI	CAYNNNNRTG	4 cut(s)	230, 428, 1161, 1582
SaqAI	TTAA	5 cut(s)	309, 999, 1551, 2090, 2215
SatI	GCNGC	4 cut(s)	663, 1050, 1331, 2055
Sau3AI	GATC	7 cut(s)	16, 106, 1017, 1106, 1350, 1899, 2149
Sau96I	GGNCC	5 cut(s)	329, 330, 1759, 1769, 1787
ScaI	AGTACT	1 cut(s)	1692
SchI	GAGTC	2 cut(s)	35, 1740
ScrFI	CCNGG	9 cut(s)	146, 327, 536, 690, 1425, 1470, 1791, 2068, 2184
SduI	GDGCHC	3 cut(s)	333, 598, 1467
SexAI	ACCWGGT	1 cut(s)	534
SfaNI	GCATC	7 cut(s)	159, 391, 937, 1218, 1732, 2053, 2174
SfcI	CTRYAG	1 cut(s)	2052
SgrAI	CRCCGGYG	1 cut(s)	413
SinI	GGWCC	2 cut(s)	1769, 1787
SmiMI	CAYNNNNRTG	4 cut(s)	230, 428, 1161, 1582
SmlI	CTYRAG	1 cut(s)	454
SmoI	CTYRAG	1 cut(s)	454
Sse9I	AATT	7 cut(s)	273, 373, 641, 909, 1031, 1060, 1223
SseBI	AGGCCT	2 cut(s)	437, 996
SsiI	CCGC	5 cut(s)	199, 222, 393, 1161, 1895
StuI	AGGCCT	2 cut(s)	437, 996
StyD4I	CCNGG	9 cut(s)	144, 325, 534, 688, 1423, 1468, 1789, 2066, 2182
StyI	CCWWGG	3 cut(s)	857, 1709, 1772
TaaI	ACNGT	8 cut(s)	427, 749, 1327, 1446, 1522, 1706, 1782, 1800
TaiI	ACGT	4 cut(s)	879, 1146, 1248, 2105
TaqI	TCGA	4 cut(s)	8, 15, 72, 810
TaqII	GACCGA	1 cut(s)	116
TasI	AATT	7 cut(s)	273, 373, 641, 909, 1031, 1060, 1223
TatI	WGTACW	3 cut(s)	1590, 1690, 2034
TfiI	GAWTC	4 cut(s)	322, 1512, 1573, 1891
Tru1I	TTAA	5 cut(s)	309, 999, 1551, 2090, 2215
Tru9I	TTAA	5 cut(s)	309, 999, 1551, 2090, 2215
TscAI	CASTG	5 cut(s)	120, 1197, 1525, 1690, 1984
TseFI	GTSAC	3 cut(s)	850, 1378, 1732
TseI	GCWGC	4 cut(s)	662, 1049, 1330, 2054
Tsp45I	GTSAC	3 cut(s)	850, 1378, 1732
TspGWI	ACGGA	1 cut(s)	649
TspRI	CASTG	5 cut(s)	120, 1197, 1525, 1690, 1984
VpaK11BI	GGWCC	2 cut(s)	1769, 1787
XapI	RAATTY	2 cut(s)	273, 641
XceI	RCATGY	4 cut(s)	66, 353, 1591, 1909
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1851
XmnI	GAANNNNTTC	1 cut(s)	644
ZrmI	AGTACT	1 cut(s)	1692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.