Auxin-induced in root cultures protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17280 AT5G47530 |
| fragaria_vesca | FvH4_3g00780 FvH4_3g00780 |
| malus_domestica | MD05G1359500.v1.1 MD10G1335000.v1.1 |
| prunus_persica | Prupe.4G008600_v2.0.a1 |
| pyrus_communis | pycom10g28480 |
| rosa_chinensis | RchiOBHm_Chr5g0001021 |
| rosa_laevigata | RLG00000030914 |
| rosa_multiflora | Rmu_sc0000255.1_g000030 Rmu_sc0004189.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00075260 |
| rosa_rugosa | Rorug04G0389000 |
| rosa_samantha | Rh5AG008200 Rh5BG010300 Rh5CG008900 Rh5DG009000 |
| rosa_wichuraiana | Rw5G000840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 403 |
| AccB1I | GGYRCC | 2 cut(s) | 284, 1138 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 228 |
| AccBSI | CCGCTC | 1 cut(s) | 423 |
| AciI | CCGC | 3 cut(s) | 318, 334, 423 |
| AclWI | GGATC | 1 cut(s) | 924 |
| AcoI | YGGCCR | 1 cut(s) | 369 |
| AcsI | RAATTY | 1 cut(s) | 1039 |
| AcuI | CTGAAG | 2 cut(s) | 464, 866 |
| AcyI | GRCGYC | 2 cut(s) | 285, 1139 |
| AdeI | CACNNNGTG | 1 cut(s) | 1150 |
| AfaI | GTAC | 2 cut(s) | 200, 698 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 228 |
| AflIII | ACRYGT | 2 cut(s) | 77, 360 |
| AgsI | TTSAA | 4 cut(s) | 169, 703, 712, 1018 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 136 |
| AjiI | CACGTC | 2 cut(s) | 363, 471 |
| AjnI | CCWGG | 1 cut(s) | 236 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 908, 940 |
| AluBI | AGCT | 8 cut(s) | 19, 29, 87, 293, 381, 609, 1079, 1094 |
| AluI | AGCT | 8 cut(s) | 19, 29, 87, 293, 381, 609, 1079, 1094 |
| Alw26I | GTCTC | 2 cut(s) | 49, 898 |
| AlwI | GGATC | 1 cut(s) | 924 |
| AoxI | GGCC | 4 cut(s) | 240, 273, 369, 1051 |
| ApeKI | GCWGC | 4 cut(s) | 5, 126, 716, 1079 |
| ApoI | RAATTY | 1 cut(s) | 1039 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 455, 487 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 707 |
| AspLEI | GCGC | 2 cut(s) | 287, 1141 |
| AspS9I | GGNCC | 6 cut(s) | 162, 240, 253, 450, 497, 513 |
| AsuC2I | CCSGG | 3 cut(s) | 181, 251, 725 |
| AsuHPI | GGTGA | 5 cut(s) | 91, 250, 340, 422, 442 |
| AsuII | TTCGAA | 1 cut(s) | 999 |
| AvaII | GGWCC | 5 cut(s) | 162, 253, 450, 497, 513 |
| BalI | TGGCCA | 1 cut(s) | 371 |
| BanI | GGYRCC | 2 cut(s) | 284, 1138 |
| BanII | GRGCYC | 1 cut(s) | 325 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1028, 1060 |
| BbsI | GAAGAC | 2 cut(s) | 333, 710 |
| BbvI | GCAGC | 4 cut(s) | 17, 138, 703, 1066 |
| BccI | CCATC | 5 cut(s) | 187, 220, 251, 780, 957 |
| BceAI | ACGGC | 1 cut(s) | 1162 |
| BciT130I | CCWGG | 1 cut(s) | 238 |
| BciVI | GTATCC | 2 cut(s) | 347, 836 |
| BclI | TGATCA | 1 cut(s) | 432 |
| BcnI | CCSGG | 3 cut(s) | 181, 251, 725 |
| BcoDI | GTCTC | 2 cut(s) | 49, 898 |
| BfmI | CTRYAG | 2 cut(s) | 124, 717 |
| BfoI | RGCGCY | 2 cut(s) | 288, 1142 |
| BfuI | GTATCC | 2 cut(s) | 347, 836 |
| BisI | GCNGC | 4 cut(s) | 6, 127, 717, 1080 |
| BlsI | GCNGC | 4 cut(s) | 7, 128, 718, 1081 |
| Bme1390I | CCNGG | 4 cut(s) | 181, 238, 251, 725 |
| Bme18I | GGWCC | 5 cut(s) | 162, 253, 450, 497, 513 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 136 |
| BmgBI | CACGTC | 2 cut(s) | 363, 471 |
| BmgT120I | GGNCC | 6 cut(s) | 162, 240, 253, 450, 497, 513 |
| BmiI | GGNNCC | 9 cut(s) | 286, 324, 452, 498, 514, 515, 604, 682, 1140 |
| BmrFI | CCNGG | 4 cut(s) | 181, 238, 251, 725 |
| BmrI | ACTGGG | 1 cut(s) | 238 |
| BmsI | GCATC | 2 cut(s) | 55, 660 |
| BmuI | ACTGGG | 1 cut(s) | 238 |
| BpiI | GAAGAC | 2 cut(s) | 333, 710 |
| Bpu10I | CCTNAGC | 1 cut(s) | 555 |
| Bpu14I | TTCGAA | 1 cut(s) | 999 |
| BpuEI | CTTGAG | 3 cut(s) | 173, 403, 602 |
| BpuMI | CCSGG | 3 cut(s) | 181, 251, 725 |
| BsaHI | GRCGYC | 2 cut(s) | 285, 1139 |
| BsaI | GGTCTC | 2 cut(s) | 49, 898 |
| BsaJI | CCNNGG | 3 cut(s) | 237, 684, 1144 |
| BsaWI | WCCGGW | 3 cut(s) | 350, 499, 596 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 370, 400, 672, 702 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 228 |
| Bse118I | RCCGGY | 1 cut(s) | 746 |
| Bse1I | ACTGG | 5 cut(s) | 164, 172, 233, 799, 941 |
| Bse3DI | GCAATG | 1 cut(s) | 1059 |
| BseBI | CCWGG | 1 cut(s) | 238 |
| BseDI | CCNNGG | 3 cut(s) | 237, 684, 1144 |
| BseGI | GGATG | 3 cut(s) | 212, 218, 791 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 228 |
| BseMI | GCAATG | 1 cut(s) | 1059 |
| BseMII | CTCAG | 4 cut(s) | 75, 569, 893, 994 |
| BseNI | ACTGG | 5 cut(s) | 164, 172, 233, 799, 941 |
| BseXI | GCAGC | 4 cut(s) | 17, 138, 703, 1066 |
| BshFI | GGCC | 4 cut(s) | 242, 275, 371, 1053 |
| BshNI | GGYRCC | 2 cut(s) | 284, 1138 |
| BsiSI | CCGG | 8 cut(s) | 180, 251, 351, 500, 579, 597, 725, 747 |
| BslFI | GGGAC | 4 cut(s) | 124, 250, 526, 574 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 228 |
| BsmAI | GTCTC | 2 cut(s) | 49, 898 |
| BsmFI | GGGAC | 4 cut(s) | 124, 250, 526, 574 |
| BsnI | GGCC | 4 cut(s) | 242, 275, 371, 1053 |
| Bso31I | GGTCTC | 2 cut(s) | 49, 898 |
| Bsp119I | TTCGAA | 1 cut(s) | 999 |
| Bsp1286I | GDGCHC | 1 cut(s) | 325 |
| Bsp143I | GATC | 4 cut(s) | 279, 345, 432, 916 |
| Bsp19I | CCATGG | 1 cut(s) | 684 |
| BspACI | CCGC | 3 cut(s) | 318, 334, 423 |
| BspANI | GGCC | 4 cut(s) | 242, 275, 371, 1053 |
| BspCNI | CTCAG | 4 cut(s) | 74, 568, 894, 993 |
| BspLI | GGNNCC | 9 cut(s) | 286, 324, 452, 498, 514, 515, 604, 682, 1140 |
| BspMAI | CTGCAG | 2 cut(s) | 128, 721 |
| BspPI | GGATC | 1 cut(s) | 924 |
| BspT104I | TTCGAA | 1 cut(s) | 999 |
| BspT107I | GGYRCC | 2 cut(s) | 284, 1138 |
| BspTNI | GGTCTC | 2 cut(s) | 49, 898 |
| BsrBI | CCGCTC | 1 cut(s) | 423 |
| BsrDI | GCAATG | 1 cut(s) | 1059 |
| BsrFI | RCCGGY | 1 cut(s) | 746 |
| BsrI | ACTGG | 5 cut(s) | 164, 172, 233, 799, 941 |
| BssAI | RCCGGY | 1 cut(s) | 746 |
| BssECI | CCNNGG | 3 cut(s) | 237, 684, 1144 |
| BssMI | GATC | 4 cut(s) | 279, 345, 432, 916 |
| BssNI | GRCGYC | 2 cut(s) | 285, 1139 |
| BssT1I | CCWWGG | 1 cut(s) | 684 |
| Bst2UI | CCWGG | 1 cut(s) | 238 |
| Bst6I | CTCTTC | 3 cut(s) | 598, 869, 1112 |
| BstACI | GRCGYC | 2 cut(s) | 285, 1139 |
| BstBI | TTCGAA | 1 cut(s) | 999 |
| BstC8I | GCNNGC | 1 cut(s) | 607 |
| BstDEI | CTNAG | 5 cut(s) | 61, 555, 902, 980, 1176 |
| BstDSI | CCRYGG | 2 cut(s) | 684, 1144 |
| BstF5I | GGATG | 3 cut(s) | 212, 218, 791 |
| BstH2I | RGCGCY | 2 cut(s) | 288, 1142 |
| BstHHI | GCGC | 2 cut(s) | 287, 1141 |
| BstKTI | GATC | 4 cut(s) | 282, 348, 435, 919 |
| BstMAI | GTCTC | 2 cut(s) | 49, 898 |
| BstMBI | GATC | 4 cut(s) | 279, 345, 432, 916 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 35, 299, 689, 725, 788, 1076, 1136 |
| BstNI | CCWGG | 1 cut(s) | 238 |
| BstNSI | RCATGY | 2 cut(s) | 81, 340 |
| BstSCI | CCNGG | 4 cut(s) | 179, 236, 249, 723 |
| BstSFI | CTRYAG | 2 cut(s) | 124, 717 |
| BstV1I | GCAGC | 4 cut(s) | 17, 138, 703, 1066 |
| BstV2I | GAAGAC | 2 cut(s) | 333, 710 |
| BsuI | GTATCC | 2 cut(s) | 347, 836 |
| BsuRI | GGCC | 4 cut(s) | 242, 275, 371, 1053 |
| BtgI | CCRYGG | 2 cut(s) | 684, 1144 |
| BtrI | CACGTC | 2 cut(s) | 363, 471 |
| BtsCI | GGATG | 3 cut(s) | 212, 218, 791 |
| BtsI | GCAGTG | 1 cut(s) | 645 |
| BtsIMutI | CAGTG | 2 cut(s) | 157, 645 |
| Cac8I | GCNNGC | 1 cut(s) | 607 |
| CfoI | GCGC | 2 cut(s) | 287, 1141 |
| Cfr10I | RCCGGY | 1 cut(s) | 746 |
| Cfr13I | GGNCC | 6 cut(s) | 162, 240, 253, 450, 497, 513 |
| Csp6I | GTAC | 2 cut(s) | 199, 697 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 519, 554, 731, 766 |
| CviAII | CATG | 9 cut(s) | 10, 78, 277, 337, 635, 685, 729, 953, 1101 |
| CviQI | GTAC | 2 cut(s) | 199, 697 |
| DdeI | CTNAG | 5 cut(s) | 61, 555, 902, 980, 1176 |
| DinI | GGCGCC | 2 cut(s) | 286, 1140 |
| DpnI | GATC | 4 cut(s) | 281, 347, 434, 918 |
| DpnII | GATC | 4 cut(s) | 279, 345, 432, 916 |
| DraIII | CACNNNGTG | 1 cut(s) | 1150 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 403 |
| DriI | GACNNNNNGTC | 1 cut(s) | 136 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 403 |
| EaeI | YGGCCR | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 3 cut(s) | 598, 869, 1112 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 136 |
| EarI | CTCTTC | 3 cut(s) | 598, 869, 1112 |
| Eco130I | CCWWGG | 1 cut(s) | 684 |
| Eco24I | GRGCYC | 1 cut(s) | 325 |
| Eco31I | GGTCTC | 2 cut(s) | 49, 898 |
| Eco47I | GGWCC | 5 cut(s) | 162, 253, 450, 497, 513 |
| Eco57I | CTGAAG | 2 cut(s) | 464, 866 |
| EcoO109I | RGGNCCY | 1 cut(s) | 513 |
| EcoRI | GAATTC | 1 cut(s) | 1039 |
| EcoRII | CCWGG | 1 cut(s) | 236 |
| EcoT14I | CCWWGG | 1 cut(s) | 684 |
| EcoT38I | GRGCYC | 1 cut(s) | 325 |
| EgeI | GGCGCC | 2 cut(s) | 286, 1140 |
| EheI | GGCGCC | 2 cut(s) | 286, 1140 |
| ErhI | CCWWGG | 1 cut(s) | 684 |
| FaeI | CATG | 9 cut(s) | 13, 81, 280, 340, 638, 688, 732, 956, 1104 |
| FaqI | GGGAC | 4 cut(s) | 124, 250, 526, 574 |
| FatI | CATG | 9 cut(s) | 9, 77, 276, 336, 634, 684, 728, 952, 1100 |
| FauI | CCCGC | 1 cut(s) | 311 |
| FbaI | TGATCA | 1 cut(s) | 432 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 127, 717, 1080 |
| FokI | GGATG | 3 cut(s) | 199, 205, 798 |
| FriOI | GRGCYC | 1 cut(s) | 325 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 127, 717, 1080 |
| GlaI | GCGC | 2 cut(s) | 286, 1140 |
| GluI | GCNGC | 4 cut(s) | 6, 127, 717, 1080 |
| HaeII | RGCGCY | 2 cut(s) | 288, 1142 |
| HaeIII | GGCC | 4 cut(s) | 242, 275, 371, 1053 |
| HapII | CCGG | 8 cut(s) | 180, 251, 351, 500, 579, 597, 725, 747 |
| HhaI | GCGC | 2 cut(s) | 287, 1141 |
| Hin1I | GRCGYC | 2 cut(s) | 285, 1139 |
| Hin1II | CATG | 9 cut(s) | 13, 81, 280, 340, 638, 688, 732, 956, 1104 |
| Hin6I | GCGC | 2 cut(s) | 285, 1139 |
| HinP1I | GCGC | 2 cut(s) | 285, 1139 |
| HincII | GTYRAC | 2 cut(s) | 991, 1162 |
| HindII | GTYRAC | 2 cut(s) | 991, 1162 |
| HindIII | AAGCTT | 2 cut(s) | 17, 1092 |
| HinfI | GANTC | 5 cut(s) | 111, 184, 475, 815, 930 |
| HpaII | CCGG | 8 cut(s) | 180, 251, 351, 500, 579, 597, 725, 747 |
| HphI | GGTGA | 5 cut(s) | 91, 250, 340, 422, 442 |
| Hpy166II | GTNNAC | 4 cut(s) | 99, 177, 991, 1162 |
| Hpy188I | TCNGA | 4 cut(s) | 64, 420, 903, 929 |
| Hpy188III | TCNNGA | 4 cut(s) | 190, 619, 667, 1015 |
| Hpy8I | GTNNAC | 4 cut(s) | 99, 177, 991, 1162 |
| Hpy99I | CGWCG | 3 cut(s) | 367, 463, 475 |
| HpyAV | CCTTC | 6 cut(s) | 67, 160, 175, 265, 995, 1120 |
| HpyCH4IV | ACGT | 3 cut(s) | 362, 390, 470 |
| HpyCH4V | TGCA | 4 cut(s) | 126, 638, 719, 870 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 35, 299, 689, 725, 788, 1076, 1136 |
| HpyF3I | CTNAG | 5 cut(s) | 61, 555, 902, 980, 1176 |
| HpySE526I | ACGT | 3 cut(s) | 362, 390, 470 |
| Hsp92I | GRCGYC | 2 cut(s) | 285, 1139 |
| Hsp92II | CATG | 9 cut(s) | 13, 81, 280, 340, 638, 688, 732, 956, 1104 |
| HspAI | GCGC | 2 cut(s) | 285, 1139 |
| KasI | GGCGCC | 2 cut(s) | 284, 1138 |
| KflI | GGGWCCC | 1 cut(s) | 513 |
| Ksp22I | TGATCA | 1 cut(s) | 432 |
| Kzo9I | GATC | 4 cut(s) | 279, 345, 432, 916 |
| LmnI | GCTCC | 5 cut(s) | 328, 378, 602, 614, 680 |
| Lsp1109I | GCAGC | 4 cut(s) | 17, 138, 703, 1066 |
| LweI | GCATC | 2 cut(s) | 55, 660 |
| MaeII | ACGT | 3 cut(s) | 362, 390, 470 |
| MaeIII | GTNAC | 3 cut(s) | 386, 394, 955 |
| MalI | GATC | 4 cut(s) | 281, 347, 434, 918 |
| MbiI | CCGCTC | 1 cut(s) | 423 |
| MboI | GATC | 4 cut(s) | 279, 345, 432, 916 |
| MfeI | CAATTG | 1 cut(s) | 531 |
| MhlI | GDGCHC | 1 cut(s) | 325 |
| MlsI | TGGCCA | 1 cut(s) | 371 |
| MluCI | AATT | 2 cut(s) | 531, 1039 |
| MluNI | TGGCCA | 1 cut(s) | 371 |
| Mly113I | GGCGCC | 2 cut(s) | 285, 1139 |
| MlyI | GAGTC | 1 cut(s) | 120 |
| MmeI | TCCRAC | 1 cut(s) | 1068 |
| Mox20I | TGGCCA | 1 cut(s) | 371 |
| MroXI | GAANNNNTTC | 1 cut(s) | 707 |
| MscI | TGGCCA | 1 cut(s) | 371 |
| MseI | TTAA | 2 cut(s) | 549, 801 |
| Msp20I | TGGCCA | 1 cut(s) | 371 |
| MspA1I | CMGCKG | 1 cut(s) | 318 |
| MspI | CCGG | 8 cut(s) | 180, 251, 351, 500, 579, 597, 725, 747 |
| MspR9I | CCNGG | 4 cut(s) | 181, 238, 251, 725 |
| MunI | CAATTG | 1 cut(s) | 531 |
| MvaI | CCWGG | 1 cut(s) | 238 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 35, 299, 689, 725, 788, 1076, 1136 |
| NarI | GGCGCC | 2 cut(s) | 285, 1139 |
| NciI | CCSGG | 3 cut(s) | 181, 251, 725 |
| NcoI | CCATGG | 1 cut(s) | 684 |
| NdeII | GATC | 4 cut(s) | 279, 345, 432, 916 |
| NlaIII | CATG | 9 cut(s) | 13, 81, 280, 340, 638, 688, 732, 956, 1104 |
| NlaIV | GGNNCC | 9 cut(s) | 286, 324, 452, 498, 514, 515, 604, 682, 1140 |
| NmuCI | GTSAC | 2 cut(s) | 394, 955 |
| NspI | RCATGY | 2 cut(s) | 81, 340 |
| NspV | TTCGAA | 1 cut(s) | 999 |
| PciI | ACATGT | 1 cut(s) | 77 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 396, 467 |
| PdmI | GAANNNNTTC | 1 cut(s) | 707 |
| PfeI | GAWTC | 4 cut(s) | 184, 475, 815, 930 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 228 |
| PkrI | GCNGC | 4 cut(s) | 7, 128, 718, 1081 |
| PleI | GAGTC | 1 cut(s) | 119 |
| PluTI | GGCGCC | 2 cut(s) | 288, 1142 |
| PpsI | GAGTC | 1 cut(s) | 119 |
| PpuMI | RGGWCCY | 1 cut(s) | 513 |
| PscI | ACATGT | 1 cut(s) | 77 |
| Psp5II | RGGWCCY | 1 cut(s) | 513 |
| Psp6I | CCWGG | 1 cut(s) | 236 |
| PspGI | CCWGG | 1 cut(s) | 236 |
| PspN4I | GGNNCC | 9 cut(s) | 286, 324, 452, 498, 514, 515, 604, 682, 1140 |
| PspPI | GGNCC | 6 cut(s) | 162, 240, 253, 450, 497, 513 |
| PspPPI | RGGWCCY | 1 cut(s) | 513 |
| PstI | CTGCAG | 2 cut(s) | 128, 721 |
| RsaI | GTAC | 2 cut(s) | 200, 698 |
| RsaNI | GTAC | 2 cut(s) | 199, 697 |
| SaqAI | TTAA | 2 cut(s) | 549, 801 |
| SatI | GCNGC | 4 cut(s) | 6, 127, 717, 1080 |
| Sau3AI | GATC | 4 cut(s) | 279, 345, 432, 916 |
| Sau96I | GGNCC | 6 cut(s) | 162, 240, 253, 450, 497, 513 |
| SchI | GAGTC | 1 cut(s) | 120 |
| ScrFI | CCNGG | 4 cut(s) | 181, 238, 251, 725 |
| SduI | GDGCHC | 1 cut(s) | 325 |
| SfaNI | GCATC | 2 cut(s) | 55, 660 |
| SfcI | CTRYAG | 2 cut(s) | 124, 717 |
| SfoI | GGCGCC | 2 cut(s) | 286, 1140 |
| SfuI | TTCGAA | 1 cut(s) | 999 |
| SinI | GGWCC | 5 cut(s) | 162, 253, 450, 497, 513 |
| SmlI | CTYRAG | 4 cut(s) | 14, 188, 382, 617 |
| SmoI | CTYRAG | 4 cut(s) | 14, 188, 382, 617 |
| Sse9I | AATT | 2 cut(s) | 531, 1039 |
| SsiI | CCGC | 3 cut(s) | 318, 334, 423 |
| SspDI | GGCGCC | 2 cut(s) | 284, 1138 |
| StyD4I | CCNGG | 4 cut(s) | 179, 236, 249, 723 |
| StyI | CCWWGG | 1 cut(s) | 684 |
| TaiI | ACGT | 3 cut(s) | 365, 393, 473 |
| TaqI | TCGA | 3 cut(s) | 344, 473, 999 |
| TaqII | GACCGA | 1 cut(s) | 413 |
| TasI | AATT | 2 cut(s) | 531, 1039 |
| TfiI | GAWTC | 4 cut(s) | 184, 475, 815, 930 |
| Tru1I | TTAA | 2 cut(s) | 549, 801 |
| Tru9I | TTAA | 2 cut(s) | 549, 801 |
| TscAI | CASTG | 2 cut(s) | 164, 645 |
| TseFI | GTSAC | 2 cut(s) | 394, 955 |
| TseI | GCWGC | 4 cut(s) | 5, 126, 716, 1079 |
| Tsp45I | GTSAC | 2 cut(s) | 394, 955 |
| TspDTI | ATGAA | 3 cut(s) | 623, 1032, 1130 |
| TspRI | CASTG | 2 cut(s) | 164, 645 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 228 |
| VpaK11BI | GGWCC | 5 cut(s) | 162, 253, 450, 497, 513 |
| XapI | RAATTY | 1 cut(s) | 1039 |
| XceI | RCATGY | 2 cut(s) | 81, 340 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1029, 1151 |
| XmnI | GAANNNNTTC | 1 cut(s) | 707 |