protein retention in ER lumen
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G62045 |
| fragaria_vesca | FvH4_3g01970 |
| malus_domestica | MD05G1347800.v1.1 MD10G1322200.v1.1 |
| prunus_persica | Prupe.4G019700_v2.0.a1 |
| pyrus_communis | pycom10g27270 |
| rosa_chinensis | RchiOBHm_Chr5g0002881 |
| rosa_multiflora | Rmu_sc0013603.1_g000008 Rmu_sc0020722.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00072980 |
| rosa_rugosa | Rorug04G0400300 |
| rosa_samantha | Rh5AG023300 Rh5CG025900 Rh5DG024400 |
| rosa_wichuraiana | Rw5G002170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 41 |
| AciI | CCGC | 2 cut(s) | 26, 41 |
| AclWI | GGATC | 2 cut(s) | 36, 209 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AjnI | CCWGG | 1 cut(s) | 16 |
| AleI | CACNNNNGTG | 1 cut(s) | 19 |
| AluBI | AGCT | 1 cut(s) | 137 |
| AluI | AGCT | 1 cut(s) | 137 |
| Alw26I | GTCTC | 1 cut(s) | 107 |
| AlwI | GGATC | 2 cut(s) | 36, 209 |
| ApeKI | GCWGC | 1 cut(s) | 146 |
| AspLEI | GCGC | 3 cut(s) | 41, 56, 161 |
| BbsI | GAAGAC | 1 cut(s) | 96 |
| BbvI | GCAGC | 1 cut(s) | 158 |
| BciT130I | CCWGG | 1 cut(s) | 18 |
| BcoDI | GTCTC | 1 cut(s) | 107 |
| BfoI | RGCGCY | 1 cut(s) | 162 |
| BisI | GCNGC | 1 cut(s) | 147 |
| BlsI | GCNGC | 1 cut(s) | 148 |
| Bme1390I | CCNGG | 1 cut(s) | 18 |
| BmrFI | CCNGG | 1 cut(s) | 18 |
| BmsI | GCATC | 1 cut(s) | 201 |
| BpiI | GAAGAC | 1 cut(s) | 96 |
| Bpu10I | CCTNAGC | 1 cut(s) | 138 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 1 cut(s) | 17 |
| Bse3DI | GCAATG | 1 cut(s) | 156 |
| BseBI | CCWGG | 1 cut(s) | 18 |
| BseDI | CCNNGG | 1 cut(s) | 17 |
| BseMI | GCAATG | 1 cut(s) | 156 |
| BseXI | GCAGC | 1 cut(s) | 158 |
| Bsh1236I | CGCG | 1 cut(s) | 41 |
| BsmAI | GTCTC | 1 cut(s) | 107 |
| Bso31I | GGTCTC | 1 cut(s) | 107 |
| Bsp143I | GATC | 3 cut(s) | 28, 168, 201 |
| BspACI | CCGC | 2 cut(s) | 26, 41 |
| BspFNI | CGCG | 1 cut(s) | 41 |
| BspPI | GGATC | 2 cut(s) | 36, 209 |
| BspTNI | GGTCTC | 1 cut(s) | 107 |
| BsrDI | GCAATG | 1 cut(s) | 156 |
| BssECI | CCNNGG | 1 cut(s) | 17 |
| BssMI | GATC | 3 cut(s) | 28, 168, 201 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| Bst2UI | CCWGG | 1 cut(s) | 18 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstC8I | GCNNGC | 1 cut(s) | 157 |
| BstDEI | CTNAG | 1 cut(s) | 138 |
| BstFNI | CGCG | 1 cut(s) | 41 |
| BstH2I | RGCGCY | 1 cut(s) | 162 |
| BstHHI | GCGC | 3 cut(s) | 41, 56, 161 |
| BstKTI | GATC | 3 cut(s) | 31, 171, 204 |
| BstMAI | GTCTC | 1 cut(s) | 107 |
| BstMBI | GATC | 3 cut(s) | 28, 168, 201 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 143, 152 |
| BstNI | CCWGG | 1 cut(s) | 18 |
| BstSCI | CCNGG | 1 cut(s) | 16 |
| BstUI | CGCG | 1 cut(s) | 41 |
| BstV1I | GCAGC | 1 cut(s) | 158 |
| BstV2I | GAAGAC | 1 cut(s) | 96 |
| BtsIMutI | CAGTG | 1 cut(s) | 218 |
| Cac8I | GCNNGC | 1 cut(s) | 157 |
| CfoI | GCGC | 3 cut(s) | 41, 56, 161 |
| CviJI | RGCY | 2 cut(s) | 137, 155 |
| CviKI_1 | RGCY | 2 cut(s) | 137, 155 |
| DdeI | CTNAG | 1 cut(s) | 138 |
| DpnI | GATC | 3 cut(s) | 30, 170, 203 |
| DpnII | GATC | 3 cut(s) | 28, 168, 201 |
| EciI | GGCGGA | 1 cut(s) | 41 |
| Eco31I | GGTCTC | 1 cut(s) | 107 |
| EcoRII | CCWGG | 1 cut(s) | 16 |
| FauI | CCCGC | 1 cut(s) | 34 |
| Fnu4HI | GCNGC | 1 cut(s) | 147 |
| Fsp4HI | GCNGC | 1 cut(s) | 147 |
| GlaI | GCGC | 3 cut(s) | 40, 55, 160 |
| GluI | GCNGC | 1 cut(s) | 147 |
| HaeII | RGCGCY | 1 cut(s) | 162 |
| HhaI | GCGC | 3 cut(s) | 41, 56, 161 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 3 cut(s) | 39, 54, 159 |
| HinP1I | GCGC | 3 cut(s) | 39, 54, 159 |
| Hpy188I | TCNGA | 1 cut(s) | 10 |
| Hpy188III | TCNNGA | 1 cut(s) | 123 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 143, 152 |
| HpyF3I | CTNAG | 1 cut(s) | 138 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 3 cut(s) | 39, 54, 159 |
| Kzo9I | GATC | 3 cut(s) | 28, 168, 201 |
| LpnPI | CCDG | 5 cut(s) | 3, 30, 108, 141, 230 |
| Lsp1109I | GCAGC | 1 cut(s) | 158 |
| LweI | GCATC | 1 cut(s) | 201 |
| MalI | GATC | 3 cut(s) | 30, 170, 203 |
| MboI | GATC | 3 cut(s) | 28, 168, 201 |
| MboII | GAAGA | 4 cut(s) | 74, 101, 232, 235 |
| MnlI | CCTC | 2 cut(s) | 38, 250 |
| MseI | TTAA | 2 cut(s) | 129, 253 |
| MslI | CAYNNNNRTG | 1 cut(s) | 19 |
| MspR9I | CCNGG | 1 cut(s) | 18 |
| MvaI | CCWGG | 1 cut(s) | 18 |
| MvnI | CGCG | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 143, 152 |
| NdeII | GATC | 3 cut(s) | 28, 168, 201 |
| OliI | CACNNNNGTG | 1 cut(s) | 19 |
| PflFI | GACNNNGTC | 1 cut(s) | 118 |
| PkrI | GCNGC | 1 cut(s) | 148 |
| Psp6I | CCWGG | 1 cut(s) | 16 |
| PspGI | CCWGG | 1 cut(s) | 16 |
| PsyI | GACNNNGTC | 1 cut(s) | 118 |
| RseI | CAYNNNNRTG | 1 cut(s) | 19 |
| SaqAI | TTAA | 2 cut(s) | 129, 253 |
| SatI | GCNGC | 1 cut(s) | 147 |
| Sau3AI | GATC | 3 cut(s) | 28, 168, 201 |
| ScrFI | CCNGG | 1 cut(s) | 18 |
| SetI | ASST | 5 cut(s) | 19, 49, 139, 144, 242 |
| SfaNI | GCATC | 1 cut(s) | 201 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 19 |
| SsiI | CCGC | 2 cut(s) | 26, 41 |
| StyD4I | CCNGG | 1 cut(s) | 16 |
| Tru1I | TTAA | 2 cut(s) | 129, 253 |
| Tru9I | TTAA | 2 cut(s) | 129, 253 |
| TscAI | CASTG | 1 cut(s) | 218 |
| TseI | GCWGC | 1 cut(s) | 146 |
| TspDTI | ATGAA | 1 cut(s) | 81 |
| TspRI | CASTG | 1 cut(s) | 218 |
| Tth111I | GACNNNGTC | 1 cut(s) | 118 |