FvH4_3g02641

Ubiquitin-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0014116
Physical Location & Seq
Reverse (-)
1337019 .. 1340760
3742 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g02641.t1

Sequence Viewer

Length: 1977 bp
ATGGATGTGATATTTGAGCCCCAGAGAGGAAGGCCCTCCTTCTCCGTTGAAGTTGGTTACTTCGACACTGTCATAGAGATCAAAGAAAAGGTTCAGAAATACCAAGGAATACCCATTTCCCAGCAAACCCTAGTCTTAAATGGCCAAGTCCTGCACGACGAACGCGACGTTGCCTACTGTCAAATCTTCGACCAATCCAAAATCCAGCTCATTATCAACTCTGAATCCGATAAACAAACTAGCAATGTCAAGCTAGAAGACTCATCCCCACCCAAGAAGGTCCATCTCAATGTGAAGACCCCCACGTCCAAAATGCATGTCTCCATAGAAATGGACCTAAACGACACCGTGGCCAAGCTGAAGGAGAAGATCCAAGGAGTGGAGCCGGTTCCCCTCAGCCGTTTGGTGCTGCATTGCACCGGTAACGAATTAAACGATCATCGATCTTTGCGCGAATGTGAGATTTCCGACAATGCAGAGATCGAGGTGAGCCTAAGAGTGTCCCCAACAACTGCTTCAGCTATTGGGGCAACAACGGTGTCCCCAGCGTCGAAAAATAAGTTGAAGCTGATGGTATTGCCCAAATGTGGGACTAAGAAAATTCCGGTGGAGGTGAATGCATCGGATAATGTAGGAGAGCTGAGGAAGGAGCTGCAGAAGTTGCACCAGAGGCTACATTTTCATCTGCCTCAGGAGAGTTACTTCTTCATCTATAAGCAGAATGTGATGGACGATGACAAGTCGTTTAGCCCTCGGCTCCTCTTGTTCATACCTCTAAATCTAATCGCCTCTCTTCAAATCCTCGAGAATTCTCCTTCAATCTCTCTCAAGATGCAAATTTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACCATTGACAACGTTAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTGCTGATTACAACATCCAGAAGGAGTCGACCCTCCATTTGGTGCTTCGTCTGCGTGGTGGTATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCTGACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTGGCAGATTACAACATCCAGAAGGAATCCACCCTTCATTTGGTGCTTCGTCTCCGTGGTGGTATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACCATCACCTTGGAGGTGGAGAGCTCAGACACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTGGCAGATTATAACATCCAGAAGGAATCCACCCTTCATTTGGTGCTTCGTCTCCGTGGTGGTATGCAGATCTTTGTCAAGACCTTGACGGGAAAGACCATCACCTTGGAGGTGGAGAGCTCAGACACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAGAGGCTTATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACCCTGGCAGACTACAACATCCAGAAGGAATCCACCCTTCATTTGGTGCTTCGTCTCCGTGGTGGTATGCAGATTTTTGTCAAGACCCTTACAGGGAAGACCATCACCCTTGAGGTGGAGAGCTCAGACACCATTGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGGATTCCACCAGACCAGCAGAGGCTTATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGTACTCTTGCAGACTACAATATCCAGAAGGAGTCTACCCTTCACCTTGTCCTCCGCCTTCGTGGTGGTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03320 map03320
Pfam Domains
Protein Families
ubiquitin

Protein Analysis

659

Amino Acids

73.91

Weight (kDa)

6.92

Isoelectric Point (pI)

37.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ubiquitin PF00240 13 - 73 2.5e-13 Ubiquitin family
ubiquitin PF00240 96 - 166 1.6e-13 Ubiquitin family
Rad60-SLD PF11976 278 - 348 1.9e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 280 - 351 2.4e-31 Ubiquitin family
Rad60-SLD PF11976 354 - 424 1.9e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 356 - 427 2.4e-31 Ubiquitin family
Rad60-SLD PF11976 430 - 500 1.9e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 432 - 503 2.4e-31 Ubiquitin family
Rad60-SLD PF11976 506 - 576 1.9e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 508 - 579 2.4e-31 Ubiquitin family
Rad60-SLD PF11976 582 - 652 1.9e-16 Ubiquitin-2 like Rad60 SUMO-like
ubiquitin PF00240 584 - 655 2.4e-31 Ubiquitin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G05230 AT4G05240 AT4G05260
fragaria_vesca FvH4_2g19820 FvH4_3g02641
malus_domestica MD05G1341200.v1.1 MD05G1341300.v1.1 MD10G1314800.v1.1
prunus_persica Prupe.4G026000_v2.0.a1
pyrus_communis pycom10g26690
rosa_chinensis RchiOBHm_Chr5g0003951
rosa_multiflora Rmu_sc0000547.1_g000007
rosa_roxburghii Rroxscaffold_1G00072020
rosa_samantha Rh5BG035000 Rh5CG038600 Rh5DG034600
rosa_wichuraiana Rw5G003290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1464
AasI GACNNNNNNGTC 1 cut(s) 304
AccB7I CCANNNNNTGG 1 cut(s) 379
AccI GTMKAC 2 cut(s) 1025, 1937
AccII CGCG 2 cut(s) 165, 453
AciI CCGC 3 cut(s) 1219, 1447, 1957
AclI AACGTT 1 cut(s) 906
AclWI GGATC 3 cut(s) 364, 1369, 1597
AcoI YGGCCR 6 cut(s) 142, 351, 988, 1216, 1444, 1672
AcsI RAATTY 3 cut(s) 600, 808, 837
AcuI CTGAAG 2 cut(s) 380, 501
AfaI GTAC 2 cut(s) 1678, 1906
AgeI ACCGGT 1 cut(s) 419
AgsI TTSAA 5 cut(s) 50, 565, 797, 819, 1835
AjiI CACGTC 1 cut(s) 306
AjnI CCWGG 5 cut(s) 1224, 1377, 1452, 1605, 1680
AjuI GAANNNNNNNTTGG 2 cut(s) 499, 531
Alw21I GWGCWC 4 cut(s) 1118, 1346, 1574, 1802
Alw26I GTCTC 4 cut(s) 325, 1280, 1508, 1736
AlwI GGATC 3 cut(s) 364, 1369, 1597
AlwNI CAGNNNCTG 1 cut(s) 958
Ama87I CYCGRG 1 cut(s) 803
AoxI GGCC 9 cut(s) 32, 142, 351, 912, 988, 1216, 1444, 1672, 1824
ApeKI GCWGC 8 cut(s) 409, 652, 952, 976, 1204, 1432, 1660, 1888
ApoI RAATTY 3 cut(s) 600, 808, 837
ArsI GACNNNNNNTTYG 4 cut(s) 303, 335, 1018, 1050
AsiGI ACCGGT 1 cut(s) 419
Asp700I GAANNNNTTC 2 cut(s) 90, 1164
AspLEI GCGC 1 cut(s) 453
AspS9I GGNCC 4 cut(s) 33, 280, 334, 946
AsuC2I CCSGG 1 cut(s) 944
AsuHPI GGTGA 9 cut(s) 499, 625, 847, 862, 1090, 1318, 1546, 1774, 1937
AvaI CYCGRG 1 cut(s) 803
AvaII GGWCC 3 cut(s) 280, 334, 946
AxyI CCTNAGG 1 cut(s) 690
BalI TGGCCA 2 cut(s) 144, 353
BanII GRGCYC 5 cut(s) 21, 1118, 1346, 1574, 1802
BbsI GAAGAC 4 cut(s) 264, 302, 879, 1781
Bbv12I GWGCWC 4 cut(s) 1118, 1346, 1574, 1802
BbvCI CCTCAGC 2 cut(s) 395, 641
BbvI GCAGC 8 cut(s) 396, 639, 964, 988, 1216, 1444, 1672, 1900
BceAI ACGGC 2 cut(s) 384, 1659
BciT130I CCWGG 5 cut(s) 1226, 1379, 1454, 1607, 1682
BciVI GTATCC 2 cut(s) 1403, 1631
BcnI CCSGG 1 cut(s) 944
BcoDI GTCTC 4 cut(s) 325, 1280, 1508, 1736
BfaI CTAG 3 cut(s) 131, 240, 254
BfmI CTRYAG 1 cut(s) 653
BfuI GTATCC 2 cut(s) 1403, 1631
BglII AGATCT 3 cut(s) 1065, 1293, 1521
Bme1390I CCNGG 6 cut(s) 944, 1226, 1379, 1454, 1607, 1682
Bme18I GGWCC 3 cut(s) 280, 334, 946
BmeT110I CYCGRG 1 cut(s) 803
BmgBI CACGTC 1 cut(s) 306
BmgT120I GGNCC 4 cut(s) 33, 280, 334, 946
BmiI GGNNCC 3 cut(s) 384, 390, 758
BmrFI CCNGG 6 cut(s) 944, 1226, 1379, 1454, 1607, 1682
BmsI GCATC 2 cut(s) 629, 822
BpiI GAAGAC 4 cut(s) 264, 302, 879, 1781
Bpu10I CCTNAGC 2 cut(s) 395, 641
BpuEI CTTGAG 9 cut(s) 812, 896, 1001, 1124, 1229, 1457, 1685, 1808, 1913
BpuMI CCSGG 1 cut(s) 944
Bsa29I ATCGAT 1 cut(s) 442
BsaWI WCCGGW 3 cut(s) 419, 604, 1313
Bse118I RCCGGY 4 cut(s) 385, 419, 857, 1880
Bse1I ACTGG 1 cut(s) 1090
Bse21I CCTNAGG 1 cut(s) 690
Bse3DI GCAATG 2 cut(s) 250, 412
BseBI CCWGG 5 cut(s) 1226, 1379, 1454, 1607, 1682
BseCI ATCGAT 1 cut(s) 442
BseMI GCAATG 2 cut(s) 250, 412
BseMII CTCAG 6 cut(s) 409, 632, 704, 1359, 1587, 1815
BseNI ACTGG 1 cut(s) 1090
BseRI GAGGAG 1 cut(s) 749
BseXI GCAGC 8 cut(s) 396, 639, 964, 988, 1216, 1444, 1672, 1900
BseYI CCCAGC 2 cut(s) 120, 544
BsgI GTGCAG 1 cut(s) 137
Bsh1236I CGCG 2 cut(s) 165, 453
BshFI GGCC 9 cut(s) 34, 144, 353, 914, 990, 1218, 1446, 1674, 1826
BshTI ACCGGT 1 cut(s) 419
BshVI ATCGAT 1 cut(s) 442
BsiHKAI GWGCWC 4 cut(s) 1118, 1346, 1574, 1802
BsiHKCI CYCGRG 1 cut(s) 803
BslFI GGGAC 3 cut(s) 487, 526, 604
BsmAI GTCTC 4 cut(s) 325, 1280, 1508, 1736
BsmBI CGTCTC 3 cut(s) 1280, 1508, 1736
BsmFI GGGAC 3 cut(s) 487, 526, 604
BsmI GAATGC 2 cut(s) 622, 1164
BsnI GGCC 9 cut(s) 34, 144, 353, 914, 990, 1218, 1446, 1674, 1826
BsoBI CYCGRG 1 cut(s) 803
Bsp1286I GDGCHC 5 cut(s) 21, 1118, 1346, 1574, 1802
BspACI CCGC 3 cut(s) 1219, 1447, 1957
BspANI GGCC 9 cut(s) 34, 144, 353, 914, 990, 1218, 1446, 1674, 1826
BspCNI CTCAG 6 cut(s) 408, 633, 703, 1358, 1586, 1814
BspDI ATCGAT 1 cut(s) 442
BspFNI CGCG 2 cut(s) 165, 453
BspLI GGNNCC 3 cut(s) 384, 390, 758
BspMAI CTGCAG 1 cut(s) 657
BspPI GGATC 3 cut(s) 364, 1369, 1597
BsrDI GCAATG 2 cut(s) 250, 412
BsrFI RCCGGY 4 cut(s) 385, 419, 857, 1880
BsrI ACTGG 1 cut(s) 1090
BssAI RCCGGY 4 cut(s) 385, 419, 857, 1880
BssT1I CCWWGG 4 cut(s) 103, 373, 1329, 1557
Bst2UI CCWGG 5 cut(s) 1226, 1379, 1454, 1607, 1682
Bst4CI ACNGT 4 cut(s) 70, 179, 349, 538
Bst6I CTCTTC 1 cut(s) 798
BstAPI GCANNNNNTGC 1 cut(s) 661
BstC8I GCNNGC 4 cut(s) 970, 974, 1882, 1886
BstDSI CCRYGG 4 cut(s) 348, 1279, 1507, 1735
BstFNI CGCG 2 cut(s) 165, 453
BstHHI GCGC 1 cut(s) 453
BstMAI GTCTC 4 cut(s) 325, 1280, 1508, 1736
BstMWI GCNNNNNNNGC 4 cut(s) 527, 661, 670, 1048
BstNI CCWGG 5 cut(s) 1226, 1379, 1454, 1607, 1682
BstNSI RCATGY 1 cut(s) 320
BstSCI CCNGG 6 cut(s) 942, 1224, 1377, 1452, 1605, 1680
BstSFI CTRYAG 1 cut(s) 653
BstUI CGCG 2 cut(s) 165, 453
BstV1I GCAGC 8 cut(s) 396, 639, 964, 988, 1216, 1444, 1672, 1900
BstV2I GAAGAC 4 cut(s) 264, 302, 879, 1781
BstX2I RGATCY 6 cut(s) 369, 1065, 1293, 1374, 1521, 1602
BstXI CCANNNNNNTGG 3 cut(s) 331, 1330, 1558
BstYI RGATCY 6 cut(s) 369, 1065, 1293, 1374, 1521, 1602
Bsu15I ATCGAT 1 cut(s) 442
Bsu36I CCTNAGG 1 cut(s) 690
BsuI GTATCC 2 cut(s) 1403, 1631
BsuRI GGCC 9 cut(s) 34, 144, 353, 914, 990, 1218, 1446, 1674, 1826
BsuTUI ATCGAT 1 cut(s) 442
BtgI CCRYGG 4 cut(s) 348, 1279, 1507, 1735
BtrI CACGTC 1 cut(s) 306
BtsIMutI CAGTG 1 cut(s) 66
Cac8I GCNNGC 4 cut(s) 970, 974, 1882, 1886
CaiI CAGNNNCTG 1 cut(s) 958
CfoI GCGC 1 cut(s) 453
Cfr10I RCCGGY 4 cut(s) 385, 419, 857, 1880
Cfr13I GGNCC 4 cut(s) 33, 280, 334, 946
ClaI ATCGAT 1 cut(s) 442
CseI GACGC 2 cut(s) 537, 944
Csp6I GTAC 2 cut(s) 1677, 1905
CspAI ACCGGT 1 cut(s) 419
CviAII CATG 1 cut(s) 317
CviQI GTAC 2 cut(s) 1677, 1905
DrdI GACNNNNNNGTC 1 cut(s) 304
DseDI GACNNNNNNGTC 1 cut(s) 304
EaeI YGGCCR 6 cut(s) 142, 351, 988, 1216, 1444, 1672
Eam1104I CTCTTC 1 cut(s) 798
EarI CTCTTC 1 cut(s) 798
EciI GGCGGA 1 cut(s) 1946
Ecl136II GAGCTC 4 cut(s) 1116, 1344, 1572, 1800
Eco130I CCWWGG 4 cut(s) 103, 373, 1329, 1557
Eco24I GRGCYC 5 cut(s) 21, 1118, 1346, 1574, 1802
Eco47I GGWCC 3 cut(s) 280, 334, 946
Eco53kI GAGCTC 4 cut(s) 1116, 1344, 1572, 1800
Eco57I CTGAAG 2 cut(s) 380, 501
Eco81I CCTNAGG 1 cut(s) 690
Eco88I CYCGRG 1 cut(s) 803
EcoICRI GAGCTC 4 cut(s) 1116, 1344, 1572, 1800
EcoO109I RGGNCCY 1 cut(s) 33
EcoRI GAATTC 1 cut(s) 808
EcoRII CCWGG 5 cut(s) 1224, 1377, 1452, 1605, 1680
EcoT14I CCWWGG 4 cut(s) 103, 373, 1329, 1557
EcoT22I ATGCAT 2 cut(s) 318, 622
EcoT38I GRGCYC 5 cut(s) 21, 1118, 1346, 1574, 1802
ErhI CCWWGG 4 cut(s) 103, 373, 1329, 1557
Esp3I CGTCTC 3 cut(s) 1280, 1508, 1736
FaeI CATG 1 cut(s) 320
FaqI GGGAC 3 cut(s) 487, 526, 604
FatI CATG 1 cut(s) 316
FblI GTMKAC 2 cut(s) 1025, 1937
FriOI GRGCYC 5 cut(s) 21, 1118, 1346, 1574, 1802
FspBI CTAG 3 cut(s) 131, 240, 254
GlaI GCGC 1 cut(s) 452
GsaI CCCAGC 2 cut(s) 124, 548
HaeIII GGCC 9 cut(s) 34, 144, 353, 914, 990, 1218, 1446, 1674, 1826
HgaI GACGC 2 cut(s) 537, 944
HhaI GCGC 1 cut(s) 453
Hin1II CATG 1 cut(s) 320
Hin6I GCGC 1 cut(s) 451
HinP1I GCGC 1 cut(s) 451
HincII GTYRAC 1 cut(s) 1026
HindII GTYRAC 1 cut(s) 1026
HphI GGTGA 9 cut(s) 499, 625, 847, 862, 1090, 1318, 1546, 1774, 1937
Hpy166II GTNNAC 2 cut(s) 1026, 1938
Hpy8I GTNNAC 2 cut(s) 1026, 1938
Hpy99I CGWCG 3 cut(s) 161, 170, 553
HpyCH4III ACNGT 4 cut(s) 70, 179, 349, 538
HpyCH4IV ACGT 4 cut(s) 168, 305, 906, 1134
HpyF10VI GCNNNNNNNGC 4 cut(s) 527, 661, 670, 1048
HpySE526I ACGT 4 cut(s) 168, 305, 906, 1134
Hsp92II CATG 1 cut(s) 320
HspAI GCGC 1 cut(s) 451
KroI GCCGGC 1 cut(s) 1880
KroNI GCCGGC 1 cut(s) 1882
LmnI GCTCC 3 cut(s) 382, 649, 762
Lsp1109I GCAGC 8 cut(s) 396, 639, 964, 988, 1216, 1444, 1672, 1900
LweI GCATC 2 cut(s) 629, 822
MaeI CTAG 3 cut(s) 131, 240, 254
MaeII ACGT 4 cut(s) 168, 305, 906, 1134
MaeIII GTNAC 3 cut(s) 56, 422, 698
MboII GAAGA 8 cut(s) 178, 269, 307, 379, 697, 785, 879, 1786
MflI RGATCY 6 cut(s) 369, 1065, 1293, 1374, 1521, 1602
MhlI GDGCHC 5 cut(s) 21, 1118, 1346, 1574, 1802
MlsI TGGCCA 2 cut(s) 144, 353
MluCI AATT 4 cut(s) 428, 600, 808, 837
MluNI TGGCCA 2 cut(s) 144, 353
MlyI GAGTC 4 cut(s) 254, 893, 1031, 1943
MmeI TCCRAC 1 cut(s) 492
Mox20I TGGCCA 2 cut(s) 144, 353
Mph1103I ATGCAT 2 cut(s) 318, 622
MroNI GCCGGC 1 cut(s) 1880
MroXI GAANNNNTTC 2 cut(s) 90, 1164
MscI TGGCCA 2 cut(s) 144, 353
MseI TTAA 3 cut(s) 137, 431, 909
MslI CAYNNNNRTG 2 cut(s) 288, 329
Msp20I TGGCCA 2 cut(s) 144, 353
MspR9I CCNGG 6 cut(s) 944, 1226, 1379, 1454, 1607, 1682
Mva1269I GAATGC 2 cut(s) 622, 1164
MvaI CCWGG 5 cut(s) 1226, 1379, 1454, 1607, 1682
MvnI CGCG 2 cut(s) 165, 453
MwoI GCNNNNNNNGC 4 cut(s) 527, 661, 670, 1048
NaeI GCCGGC 1 cut(s) 1882
NciI CCSGG 1 cut(s) 944
NgoMIV GCCGGC 1 cut(s) 1880
NlaIII CATG 1 cut(s) 320
NlaIV GGNNCC 3 cut(s) 384, 390, 758
NmeAIII GCCGAG 1 cut(s) 733
NsiI ATGCAT 2 cut(s) 318, 622
NspI RCATGY 1 cut(s) 320
PaeR7I CTCGAG 1 cut(s) 803
PcsI WCGNNNNNNNCGW 3 cut(s) 162, 165, 432
PctI GAATGC 2 cut(s) 622, 1164
PdiI GCCGGC 1 cut(s) 1882
PdmI GAANNNNTTC 2 cut(s) 90, 1164
PfeI GAWTC 9 cut(s) 224, 919, 936, 1147, 1250, 1478, 1706, 1831, 1849
PflFI GACNNNGTC 2 cut(s) 68, 1133
PflMI CCANNNNNTGG 1 cut(s) 379
PfoI TCCNGGA 2 cut(s) 1377, 1605
PinAI ACCGGT 1 cut(s) 419
PleI GAGTC 4 cut(s) 254, 892, 1030, 1942
PpsI GAGTC 4 cut(s) 254, 892, 1030, 1942
PsiI TTATAA 1 cut(s) 1464
Psp124BI GAGCTC 4 cut(s) 1118, 1346, 1574, 1802
Psp1406I AACGTT 1 cut(s) 906
Psp6I CCWGG 5 cut(s) 1224, 1377, 1452, 1605, 1680
PspFI CCCAGC 2 cut(s) 120, 544
PspGI CCWGG 5 cut(s) 1224, 1377, 1452, 1605, 1680
PspN4I GGNNCC 3 cut(s) 384, 390, 758
PspPI GGNCC 4 cut(s) 33, 280, 334, 946
PstI CTGCAG 1 cut(s) 657
PstNI CAGNNNCTG 1 cut(s) 958
PsuI RGATCY 6 cut(s) 369, 1065, 1293, 1374, 1521, 1602
PsyI GACNNNGTC 2 cut(s) 68, 1133
RsaI GTAC 2 cut(s) 1678, 1906
RsaNI GTAC 2 cut(s) 1677, 1905
RseI CAYNNNNRTG 2 cut(s) 288, 329
SacI GAGCTC 4 cut(s) 1118, 1346, 1574, 1802
SalI GTCGAC 1 cut(s) 1024
SaqAI TTAA 3 cut(s) 137, 431, 909
Sau96I GGNCC 4 cut(s) 33, 280, 334, 946
SchI GAGTC 4 cut(s) 254, 893, 1031, 1943
ScrFI CCNGG 6 cut(s) 944, 1226, 1379, 1454, 1607, 1682
SduI GDGCHC 5 cut(s) 21, 1118, 1346, 1574, 1802
SfaNI GCATC 2 cut(s) 629, 822
SfcI CTRYAG 1 cut(s) 653
Sfr274I CTCGAG 1 cut(s) 803
SinI GGWCC 3 cut(s) 280, 334, 946
SlaI CTCGAG 1 cut(s) 803
SmiMI CAYNNNNRTG 2 cut(s) 288, 329
Sse9I AATT 4 cut(s) 428, 600, 808, 837
SsiI CCGC 3 cut(s) 1219, 1447, 1957
SspMI CTAG 3 cut(s) 131, 240, 254
SstI GAGCTC 4 cut(s) 1118, 1346, 1574, 1802
StyD4I CCNGG 6 cut(s) 942, 1224, 1377, 1452, 1605, 1680
StyI CCWWGG 4 cut(s) 103, 373, 1329, 1557
TaaI ACNGT 4 cut(s) 70, 179, 349, 538
TaiI ACGT 4 cut(s) 171, 308, 909, 1137
TasI AATT 4 cut(s) 428, 600, 808, 837
TauI GCSGC 2 cut(s) 1221, 1449
TfiI GAWTC 9 cut(s) 224, 919, 936, 1147, 1250, 1478, 1706, 1831, 1849
Tru1I TTAA 3 cut(s) 137, 431, 909
Tru9I TTAA 3 cut(s) 137, 431, 909
TscAI CASTG 1 cut(s) 73
TseI GCWGC 8 cut(s) 409, 652, 952, 976, 1204, 1432, 1660, 1888
TspDTI ATGAA 6 cut(s) 671, 697, 757, 1250, 1478, 1706
TspGWI ACGGA 4 cut(s) 34, 1268, 1496, 1724
TspRI CASTG 1 cut(s) 73
Tth111I GACNNNGTC 2 cut(s) 68, 1133
Van91I CCANNNNNTGG 1 cut(s) 379
VpaK11BI GGWCC 3 cut(s) 280, 334, 946
XapI RAATTY 3 cut(s) 600, 808, 837
XceI RCATGY 1 cut(s) 320
XcmI CCANNNNNNNNNTGG 3 cut(s) 1261, 1489, 1717
XhoI CTCGAG 1 cut(s) 803
XmiI GTMKAC 2 cut(s) 1025, 1937
XmnI GAANNNNTTC 2 cut(s) 90, 1164
XspI CTAG 3 cut(s) 131, 240, 254
Zsp2I ATGCAT 2 cut(s) 318, 622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.