Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007917

Physical Location & Seq

Genomic Coordinates Reverse (-)

2005205 .. 2010120

Gene Structure 4916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g03590.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGGAAATCATCACTGGTAAAAACCCAGGTTCTGTTTTCCAGCTTCTTTCTATCTTTCTAATTGTTTCTTGCTCTGTTCCTCTGATTTGCTCTGCTTCGAGTTCAATCACACAAGGTCAGACTATAAAAGACGGCCAGACTTTGATCTCCAATGGCCAAACCTTCGAGCTTGGCTTCTTCAGTCCGGGGAATTCATCGTTTCGCTACGTCGGTATTTGGTACTACAAACTTTCAGACCCGGCGATCGTTTGGGTCGCAAACAGAGAGAGCCCTGTTTCTGATAAAACTGGAGTCTTAACAATCGGAAGCGATGGAAACCTGGTGATTCTAGAAGGAAACAGCACTGAAATATGGTCCAGCAATGTCTCATCACTACCCAAGAACACATCTGCAGTCCTGAGAGATACAGGAAATCTTGTGCTTTCGACAAATGAAACCAACGAGTCATATTGGGAGAGTTTTGATAATCCTACTGATACGTTTCTGCCTGGGATGAGAGTGAAGGTGAACGCTAAAGAAGGAGAGAATCGTGCTTTCAGGTCATGGAAATCAGCCAACGATCCAGCTCCAGGTGACTATTTCTCTGGGGTTGATCCCAGAGCAGCACCACAGCTTATGATATGGAATGGTTCTGAACGGAGATGGAGAAGTGGGCATTGGAACAAGTTGATATTTATTGGTCTTCCTGATATGCCTACAAGATACGCTGCTGGGTTTAGTCTAACGGATCGTGCTGACCAAAATGGGAGCACCTACTTGTCTTACACACCGTGGAATGTGTCAGATAGGCTGAGGTTTCAGATTAGGTGGGATGGTTATGAAGAGCAGAGTATTTGGGTGGATGAGTTGAACAAGTGGGTTGATCTTATGTCTCAGCCGAACAAGAGCAGCGGGTGTGAGCTTTATAACAAGTGTGGGAACTTCGGGCTTTGTAGCGCTTCGGATGATGCTAGTTGTGAGTGTATGCAAGGATTTGAACGAAAGAATTGGGGGAACTGGTCAGAGGGGTGTGAAAGGAAGACACCATTGAAGTGTCAGAGAAATAGTACTAATGTTGAAGATGGTGAGGATGGGTTTGTGGCGGTGAAGTGTACTAAGGTGCCGGATTTTGCCGACTTAGTGGTGGTGACAGGTCCACAGATCAGCTGTGAGCAGTCTTGTTTGAACAACTGTTCATGCACTGCTTATGCAGATGTTTCTGGACTTGGTTGTATGATTTGGACAACTGAGTTGGTCGATGTGCAACAGTTTTCAAAGGGGGGAAACACATTGTATATTCGTGTTGCTCATGCCGATTTAGGTGGCAGCAAGAAACTATCCACCCTTGTGATATCACTAATTTCTGTAGCGGTTGCAATCTTCGTTGCCATCTTGATATTTCTAGTATGGAGGTTCAAAGGAAAACTTAAAGTGTTGCCCACCACTTCAATATCATGGTTGAGAATCGGTGAAACGCCAACTTATGATGCTGGCAAGAGCAAAGAATTCTCAACAGAAATGTCAGGATCAGTTGACCCGACTGTAGATGGGAATCAAGCAAATGGACCTGATTTGCCATCATTCAATTTCAACAGTGTAGCAGCTGCTACTGACCACTTTTCTCTAGTAAACAAGCTTGGCAATGGGGGATTTGGTACTGTCTACAAGGGAGTCCTTCCAGGGTTAGAAGAAGTAGCTGTCAAGAGACTTTCTCAAGTATCTTGCCAAGGGTTGGAGGAGTTTAAGAATGAGATCAATTTGATTGCTAAGTTACAGCACAGGAATCTTGTTAGGCTAGTAGGCTGTTGCATTGAAGGAGAAGAAAAGATGCTGCTATATGAATACATGCCAAACAAAAGCTTGGATTTCTTTCTTTTCGATGCAACTAAGCAAGCGCTACTAGATTGGAGTAAACGCTTCATGATTATTGAAGGGATTGCACGAGGGCTCCTGTATCTCCACAGAGATTCAAGACTTCGAATAATTCATCGAGACTTGAAAGCTAGCAACATATTGCTAGATGAAGATATGATCCCCAAAATTTCTGACTTTGGTATGGCAAGAATATTTGGGGGGAACCAACACGAAGCAAACACGATGAGAGTTGTTGGCACATACGGTTATATGTCACCTGAATATGCAATGGAAGGTCTGTTTTCAGTGAAGTCGGATGTCTATAGCTTTGGGGTATTGCTGCTAGAGATTGTGAGTGGCCGGAGGAACACTAGCTTACGAACCTCAGAACACTTGAGCCTTATTGGATATGCATGGAATCTCTGGAATGCAAATACACCAGAGGATCTCATTGATCCTTCCATTGCAGAAACTTGTAATAATCGATCTGAACTAGTGAGATGCATACATGTTGGATTGTTGTGTGTGCAAGATTCCGCAGATTCGAGACCAACCATGTCAGCAGTGGTGCTAATGCTGGAGAGTGAAACTGCAAATCTCCCATTGCCTAGAGAACCCATGTTTACTTCAATCAAGAAATATGTGGATACAACTTTTAGTACAGAAGAAGAAACCCCAGATTTAGCTTCTGTAAACCATGTCACTATTACAGTGGTAGATGGAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

854

Amino Acids

94.53

Weight (kDa)

5.22

Isoelectric Point (pI)

38.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	82 - 183	1.8e-35	D-mannose binding lectin
S_locus_glycop	PF00954	215 - 328	2e-25	S-locus glycoprotein domain
PAN_2	PF08276	354 - 414	9.3e-16	PAN-like domain
Pkinase	PF00069	534 - 736	4.3e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	535 - 732	8.1e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61610 AT1G61610 AT4G21390 AT4G21390
fragaria_vesca	FvH4_3g03590 FvH4_3g03590 FvH4_3g03590 FvH4_3g03590 FvH4_3g03590
malus_domestica	MD05G1329600.v1.1 MD10G1306600.v1.1
prunus_persica	Prupe.4G033200_v2.0.a1
pyrus_communis	pycom05g30270 pycom10g25870
rosa_chinensis	RchiOBHm_Chr5g0005641
rosa_laevigata	RLG00000031314
rosa_multiflora	Rmu_co8421279.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070190
rosa_rugosa	Rorug04G0417000
rosa_samantha	Rh5AG044400 Rh5BG043200 Rh5CG052000 Rh5DG043200
rosa_wichuraiana	Rw5G004470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	906
AccB1I	GGYRCC	1 cut(s)	1099
AccB7I	CCANNNNNTGG	1 cut(s)	1711
AccI	GTMKAC	1 cut(s)	1641
AciI	CCGC	4 cut(s)	891, 1082, 1349, 2370
AclWI	GGATC	7 cut(s)	554, 587, 735, 1513, 2005, 2282, 2286
AcoI	YGGCCR	3 cut(s)	133, 154, 2191
AcsI	RAATTY	3 cut(s)	190, 1484, 2019
AcuI	CTGAAG	1 cut(s)	163
AdeI	CACNNNGTG	1 cut(s)	771
AfaI	GTAC	5 cut(s)	221, 1048, 1093, 1636, 2494
AfeI	AGCGCT	2 cut(s)	937, 1875
AfiI	CCNNNNNNNGG	2 cut(s)	569, 1711
AflIII	ACRYGT	1 cut(s)	2341
AhlI	ACTAGT	1 cut(s)	2326
AjnI	CCWGG	5 cut(s)	25, 318, 487, 568, 1657
AjuI	GAANNNNNNNTTGG	2 cut(s)	640, 672
AleI	CACNNNNGTG	1 cut(s)	1325
Alw21I	GWGCWC	1 cut(s)	752
Alw26I	GTCTC	5 cut(s)	370, 876, 1678, 1965, 2374
AlwI	GGATC	7 cut(s)	554, 587, 735, 1513, 2005, 2282, 2286
AlwNI	CAGNNNCTG	1 cut(s)	32
Aor51HI	AGCGCT	2 cut(s)	937, 1875
AoxI	GGCC	3 cut(s)	133, 154, 2191
ApeKI	GCWGC	8 cut(s)	602, 707, 888, 1305, 1580, 1583, 1810, 2173
ApoI	RAATTY	3 cut(s)	190, 1484, 2019
AspLEI	GCGC	2 cut(s)	938, 1876
AspS9I	GGNCC	3 cut(s)	354, 1133, 1544
AsuC2I	CCSGG	2 cut(s)	186, 239
AsuHPI	GGTGA	8 cut(s)	334, 517, 584, 1076, 1096, 1138, 1460, 2100
AsuII	TTCGAA	1 cut(s)	1957
AsuNHI	GCTAGC	1 cut(s)	1982
AvaII	GGWCC	3 cut(s)	354, 1133, 1544
BalI	TGGCCA	1 cut(s)	156
BanI	GGYRCC	1 cut(s)	1099
BanII	GRGCYC	2 cut(s)	272, 1929
BauI	CACGAG	1 cut(s)	1920
BbsI	GAAGAC	2 cut(s)	674, 1025
Bbv12I	GWGCWC	1 cut(s)	752
BbvCI	CCTCAGC	1 cut(s)	791
BbvI	GCAGC	8 cut(s)	614, 694, 900, 1317, 1570, 1592, 1797, 2160
BccI	CCATC	9 cut(s)	305, 636, 806, 1055, 1064, 1376, 1520, 1564, 2546
BceAI	ACGGC	1 cut(s)	148
BciT130I	CCWGG	5 cut(s)	27, 320, 489, 570, 1659
BciVI	GTATCC	1 cut(s)	2473
BcnI	CCSGG	2 cut(s)	186, 239
BcoDI	GTCTC	5 cut(s)	370, 876, 1678, 1965, 2374
BcuI	ACTAGT	1 cut(s)	2326
BfmI	CTRYAG	4 cut(s)	390, 1344, 1521, 2155
BfoI	RGCGCY	2 cut(s)	939, 1877
BfuI	GTATCC	1 cut(s)	2473
BisI	GCNGC	8 cut(s)	603, 708, 889, 1306, 1581, 1584, 1811, 2174
BlsI	GCNGC	8 cut(s)	604, 709, 890, 1307, 1582, 1585, 1812, 2175
BmcAI	AGTACT	1 cut(s)	1048
Bme1390I	CCNGG	7 cut(s)	27, 186, 239, 320, 489, 570, 1659
Bme18I	GGWCC	3 cut(s)	354, 1133, 1544
BmgT120I	GGNCC	3 cut(s)	354, 1133, 1544
BmiI	GGNNCC	3 cut(s)	1101, 1928, 2057
BmrFI	CCNGG	7 cut(s)	27, 186, 239, 320, 489, 570, 1659
BmsI	GCATC	5 cut(s)	937, 1456, 1797, 1849, 2324
BmtI	GCTAGC	1 cut(s)	1986
BpiI	GAAGAC	2 cut(s)	674, 1025
BplI	GAGNNNNNCTC	2 cut(s)	1675, 1707
BpmI	CTGGAG	3 cut(s)	309, 552, 2432
Bpu10I	CCTNAGC	1 cut(s)	791
Bpu14I	TTCGAA	1 cut(s)	1957
BpuEI	CTTGAG	2 cut(s)	1677, 2248
BpuMI	CCSGG	2 cut(s)	186, 239
Bsa29I	ATCGAT	1 cut(s)	2317
BsaBI	GATNNNNATC	1 cut(s)	1530
BsaI	GGTCTC	1 cut(s)	2374
BsaJI	CCNNGG	6 cut(s)	25, 185, 488, 770, 1658, 1705
BsaXI	ACNNNNNCTCC	2 cut(s)	1911, 1941
Bsc4I	CCNNNNNNNGG	2 cut(s)	569, 1711
Bse1I	ACTGG	3 cut(s)	19, 292, 1001
Bse3DI	GCAATG	5 cut(s)	367, 1627, 2127, 2295, 2435
Bse8I	GATNNNNATC	1 cut(s)	1530
BseBI	CCWGG	5 cut(s)	27, 320, 489, 570, 1659
BseCI	ATCGAT	1 cut(s)	2317
BseDI	CCNNGG	6 cut(s)	25, 185, 488, 770, 1658, 1705
BseGI	GGATG	6 cut(s)	498, 817, 847, 949, 1075, 2155
BseJI	GATNNNNATC	1 cut(s)	1530
BseLI	CCNNNNNNNGG	2 cut(s)	569, 1711
BseMI	GCAATG	5 cut(s)	367, 1627, 2127, 2295, 2435
BseMII	CTCAG	5 cut(s)	389, 782, 887, 1218, 2232
BseNI	ACTGG	3 cut(s)	19, 292, 1001
BseRI	GAGGAG	1 cut(s)	1730
BseXI	GCAGC	8 cut(s)	614, 694, 900, 1317, 1570, 1592, 1797, 2160
BseYI	CCCAGC	1 cut(s)	710
Bsh1285I	CGRYCG	1 cut(s)	246
BshFI	GGCC	3 cut(s)	135, 156, 2193
BshNI	GGYRCC	1 cut(s)	1099
BshVI	ATCGAT	1 cut(s)	2317
BsiEI	CGRYCG	1 cut(s)	246
BsiHKAI	GWGCWC	1 cut(s)	752
BsiSI	CCGG	4 cut(s)	185, 239, 1103, 2194
BslI	CCNNNNNNNGG	2 cut(s)	569, 1711
BsmAI	GTCTC	5 cut(s)	370, 876, 1678, 1965, 2374
BsmI	GAATGC	1 cut(s)	2266
BsnI	GGCC	3 cut(s)	135, 156, 2193
Bso31I	GGTCTC	1 cut(s)	2374
Bsp119I	TTCGAA	1 cut(s)	1957
Bsp1286I	GDGCHC	3 cut(s)	272, 752, 1929
BspACI	CCGC	4 cut(s)	891, 1082, 1349, 2370
BspANI	GGCC	3 cut(s)	135, 156, 2193
BspCNI	CTCAG	5 cut(s)	390, 783, 886, 1219, 2231
BspDI	ATCGAT	1 cut(s)	2317
BspHI	TCATGA	1 cut(s)	1899
BspLI	GGNNCC	3 cut(s)	1101, 1928, 2057
BspMAI	CTGCAG	1 cut(s)	394
BspOI	GCTAGC	1 cut(s)	1986
BspPI	GGATC	7 cut(s)	554, 587, 735, 1513, 2005, 2282, 2286
BspQI	GCTCTTC	1 cut(s)	816
BspT104I	TTCGAA	1 cut(s)	1957
BspT107I	GGYRCC	1 cut(s)	1099
BspTNI	GGTCTC	1 cut(s)	2374
BsrDI	GCAATG	5 cut(s)	367, 1627, 2127, 2295, 2435
BsrI	ACTGG	3 cut(s)	19, 292, 1001
BssECI	CCNNGG	6 cut(s)	25, 185, 488, 770, 1658, 1705
BssSI	CACGAG	1 cut(s)	1920
BssT1I	CCWWGG	1 cut(s)	1705
Bst2BI	CACGAG	1 cut(s)	1920
Bst2UI	CCWGG	5 cut(s)	27, 320, 489, 570, 1659
Bst4CI	ACNGT	8 cut(s)	771, 1172, 1248, 1522, 1574, 1639, 2099, 2545
Bst6I	CTCTTC	1 cut(s)	816
BstBI	TTCGAA	1 cut(s)	1957
BstC8I	GCNNGC	3 cut(s)	1471, 1872, 1984
BstDEI	CTNAG	9 cut(s)	398, 791, 873, 1095, 1117, 1227, 1746, 1866, 2218
BstDSI	CCRYGG	1 cut(s)	770
BstF5I	GGATG	6 cut(s)	498, 817, 847, 949, 1075, 2155
BstH2I	RGCGCY	2 cut(s)	939, 1877
BstHHI	GCGC	2 cut(s)	938, 1876
BstMAI	GTCTC	5 cut(s)	370, 876, 1678, 1965, 2374
BstMCI	CGRYCG	1 cut(s)	246
BstNI	CCWGG	5 cut(s)	27, 320, 489, 570, 1659
BstNSI	RCATGY	2 cut(s)	1828, 2345
BstSCI	CCNGG	7 cut(s)	25, 184, 237, 318, 487, 568, 1657
BstSFI	CTRYAG	4 cut(s)	390, 1344, 1521, 2155
BstV1I	GCAGC	8 cut(s)	614, 694, 900, 1317, 1570, 1592, 1797, 2160
BstV2I	GAAGAC	2 cut(s)	674, 1025
BstX2I	RGATCY	1 cut(s)	2278
BstYI	RGATCY	1 cut(s)	2278
Bsu15I	ATCGAT	1 cut(s)	2317
BsuI	GTATCC	1 cut(s)	2473
BsuRI	GGCC	3 cut(s)	135, 156, 2193
BsuTUI	ATCGAT	1 cut(s)	2317
BtgI	CCRYGG	1 cut(s)	770
BtgZI	GCGATG	1 cut(s)	324
BtsCI	GGATG	6 cut(s)	498, 817, 847, 949, 1075, 2155
BtsI	GCAGTG	2 cut(s)	1179, 2403
BtsIMutI	CAGTG	7 cut(s)	12, 342, 1179, 1579, 2145, 2403, 2550
Cac8I	GCNNGC	3 cut(s)	1471, 1872, 1984
CaiI	CAGNNNCTG	1 cut(s)	32
CciI	TCATGA	1 cut(s)	1899
CfoI	GCGC	2 cut(s)	938, 1876
Cfr13I	GGNCC	3 cut(s)	354, 1133, 1544
ClaI	ATCGAT	1 cut(s)	2317
CsiI	ACCWGGT	1 cut(s)	318
Csp6I	GTAC	5 cut(s)	220, 1047, 1092, 1635, 2493
CviQI	GTAC	5 cut(s)	220, 1047, 1092, 1635, 2493
DdeI	CTNAG	9 cut(s)	398, 791, 873, 1095, 1117, 1227, 1746, 1866, 2218
DraIII	CACNNNGTG	1 cut(s)	771
EaeI	YGGCCR	3 cut(s)	133, 154, 2191
Eam1104I	CTCTTC	1 cut(s)	816
EarI	CTCTTC	1 cut(s)	816
Eco130I	CCWWGG	1 cut(s)	1705
Eco24I	GRGCYC	2 cut(s)	272, 1929
Eco31I	GGTCTC	1 cut(s)	2374
Eco32I	GATATC	1 cut(s)	1332
Eco47I	GGWCC	3 cut(s)	354, 1133, 1544
Eco47III	AGCGCT	2 cut(s)	937, 1875
Eco57I	CTGAAG	1 cut(s)	163
EcoRI	GAATTC	2 cut(s)	190, 1484
EcoRII	CCWGG	5 cut(s)	25, 318, 487, 568, 1657
EcoRV	GATATC	1 cut(s)	1332
EcoT14I	CCWWGG	1 cut(s)	1705
EcoT22I	ATGCAT	2 cut(s)	2248, 2339
EcoT38I	GRGCYC	2 cut(s)	272, 1929
ErhI	CCWWGG	1 cut(s)	1705
FalI	AAGNNNNNCTT	2 cut(s)	1389, 1421
FauI	CCCGC	1 cut(s)	884
FblI	GTMKAC	1 cut(s)	1641
Fnu4HI	GCNGC	8 cut(s)	603, 708, 889, 1306, 1581, 1584, 1811, 2174
FokI	GGATG	6 cut(s)	505, 824, 854, 956, 1082, 2162
FriOI	GRGCYC	2 cut(s)	272, 1929
Fsp4HI	GCNGC	8 cut(s)	603, 708, 889, 1306, 1581, 1584, 1811, 2174
GlaI	GCGC	2 cut(s)	937, 1875
GluI	GCNGC	8 cut(s)	603, 708, 889, 1306, 1581, 1584, 1811, 2174
GsaI	CCCAGC	1 cut(s)	714
GsuI	CTGGAG	3 cut(s)	309, 552, 2432
HaeII	RGCGCY	2 cut(s)	939, 1877
HaeIII	GGCC	3 cut(s)	135, 156, 2193
HapII	CCGG	4 cut(s)	185, 239, 1103, 2194
HhaI	GCGC	2 cut(s)	938, 1876
Hin6I	GCGC	2 cut(s)	936, 1874
HinP1I	GCGC	2 cut(s)	936, 1874
HincII	GTYRAC	1 cut(s)	1513
HindII	GTYRAC	1 cut(s)	1513
HindIII	AAGCTT	2 cut(s)	1613, 1837
HpaII	CCGG	4 cut(s)	185, 239, 1103, 2194
HphI	GGTGA	8 cut(s)	334, 517, 584, 1076, 1096, 1138, 1460, 2100
Hpy166II	GTNNAC	9 cut(s)	508, 1092, 1136, 1513, 1609, 1642, 1892, 2457, 2527
Hpy8I	GTNNAC	9 cut(s)	508, 1092, 1136, 1513, 1609, 1642, 1892, 2457, 2527
Hpy99I	CGWCG	1 cut(s)	212
HpyCH4III	ACNGT	8 cut(s)	771, 1172, 1248, 1522, 1574, 1639, 2099, 2545
HpyCH4IV	ACGT	2 cut(s)	207, 479
HpyF3I	CTNAG	9 cut(s)	398, 791, 873, 1095, 1117, 1227, 1746, 1866, 2218
HpySE526I	ACGT	2 cut(s)	207, 479
HspAI	GCGC	2 cut(s)	936, 1874
LguI	GCTCTTC	1 cut(s)	816
LmnI	GCTCC	3 cut(s)	571, 747, 1932
Lsp1109I	GCAGC	8 cut(s)	614, 694, 900, 1317, 1570, 1592, 1797, 2160
LweI	GCATC	5 cut(s)	937, 1456, 1797, 1849, 2324
MabI	ACCWGGT	1 cut(s)	318
MaeII	ACGT	2 cut(s)	207, 479
MaeIII	GTNAC	5 cut(s)	572, 1126, 1749, 2106, 2533
MflI	RGATCY	1 cut(s)	2278
MhlI	GDGCHC	3 cut(s)	272, 752, 1929
MlsI	TGGCCA	1 cut(s)	156
MluCI	AATT	9 cut(s)	60, 190, 985, 1338, 1484, 1564, 1735, 1962, 2019
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	3 cut(s)	300, 452, 1659
MmeI	TCCRAC	3 cut(s)	1692, 2127, 2326
Mox20I	TGGCCA	1 cut(s)	156
Mph1103I	ATGCAT	2 cut(s)	2248, 2339
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	3 cut(s)	296, 1407, 1722
MslI	CAYNNNNRTG	2 cut(s)	1030, 1325
Msp20I	TGGCCA	1 cut(s)	156
MspA1I	CMGCKG	3 cut(s)	891, 1146, 1583
MspI	CCGG	4 cut(s)	185, 239, 1103, 2194
MspR9I	CCNGG	7 cut(s)	27, 186, 239, 320, 489, 570, 1659
Mva1269I	GAATGC	1 cut(s)	2266
MvaI	CCWGG	5 cut(s)	27, 320, 489, 570, 1659
NciI	CCSGG	2 cut(s)	186, 239
NheI	GCTAGC	1 cut(s)	1982
NlaIV	GGNNCC	3 cut(s)	1101, 1928, 2057
NmuCI	GTSAC	4 cut(s)	572, 1126, 2106, 2533
NsiI	ATGCAT	2 cut(s)	2248, 2339
NspI	RCATGY	2 cut(s)	1828, 2345
NspV	TTCGAA	1 cut(s)	1957
OliI	CACNNNNGTG	1 cut(s)	1325
PagI	TCATGA	1 cut(s)	1899
PciI	ACATGT	1 cut(s)	2341
PciSI	GCTCTTC	1 cut(s)	816
PctI	GAATGC	1 cut(s)	2266
PfeI	GAWTC	9 cut(s)	325, 526, 1443, 1531, 1762, 1946, 2251, 2366, 2375
PflMI	CCANNNNNTGG	1 cut(s)	1711
PkrI	GCNGC	8 cut(s)	604, 709, 890, 1307, 1582, 1585, 1812, 2175
Ple19I	CGATCG	1 cut(s)	246
PleI	GAGTC	3 cut(s)	299, 451, 1658
PpsI	GAGTC	3 cut(s)	299, 451, 1658
PscI	ACATGT	1 cut(s)	2341
PsiI	TTATAA	1 cut(s)	906
Psp6I	CCWGG	5 cut(s)	25, 318, 487, 568, 1657
PspFI	CCCAGC	1 cut(s)	710
PspGI	CCWGG	5 cut(s)	25, 318, 487, 568, 1657
PspN4I	GGNNCC	3 cut(s)	1101, 1928, 2057
PspPI	GGNCC	3 cut(s)	354, 1133, 1544
PstI	CTGCAG	1 cut(s)	394
PstNI	CAGNNNCTG	1 cut(s)	32
PsuI	RGATCY	1 cut(s)	2278
PvuI	CGATCG	1 cut(s)	246
PvuII	CAGCTG	2 cut(s)	1146, 1583
RsaI	GTAC	5 cut(s)	221, 1048, 1093, 1636, 2494
RsaNI	GTAC	5 cut(s)	220, 1047, 1092, 1635, 2493
RseI	CAYNNNNRTG	2 cut(s)	1030, 1325
SapI	GCTCTTC	1 cut(s)	816
SaqAI	TTAA	3 cut(s)	296, 1407, 1722
SatI	GCNGC	8 cut(s)	603, 708, 889, 1306, 1581, 1584, 1811, 2174
Sau96I	GGNCC	3 cut(s)	354, 1133, 1544
ScaI	AGTACT	1 cut(s)	1048
SchI	GAGTC	3 cut(s)	300, 452, 1659
ScrFI	CCNGG	7 cut(s)	27, 186, 239, 320, 489, 570, 1659
SduI	GDGCHC	3 cut(s)	272, 752, 1929
SexAI	ACCWGGT	1 cut(s)	318
SfaNI	GCATC	5 cut(s)	937, 1456, 1797, 1849, 2324
SfcI	CTRYAG	4 cut(s)	390, 1344, 1521, 2155
SfuI	TTCGAA	1 cut(s)	1957
SinI	GGWCC	3 cut(s)	354, 1133, 1544
SmiMI	CAYNNNNRTG	2 cut(s)	1030, 1325
SmlI	CTYRAG	2 cut(s)	1692, 2227
SmoI	CTYRAG	2 cut(s)	1692, 2227
SpeI	ACTAGT	1 cut(s)	2326
Sse9I	AATT	9 cut(s)	60, 190, 985, 1338, 1484, 1564, 1735, 1962, 2019
SsiI	CCGC	4 cut(s)	891, 1082, 1349, 2370
SspI	AATATT	1 cut(s)	2046
StyD4I	CCNGG	7 cut(s)	25, 184, 237, 318, 487, 568, 1657
StyI	CCWWGG	1 cut(s)	1705
TaaI	ACNGT	8 cut(s)	771, 1172, 1248, 1522, 1574, 1639, 2099, 2545
TaiI	ACGT	2 cut(s)	210, 482
TaqI	TCGA	9 cut(s)	98, 165, 425, 1236, 1857, 1957, 1969, 2317, 2378
TasI	AATT	9 cut(s)	60, 190, 985, 1338, 1484, 1564, 1735, 1962, 2019
TatI	WGTACW	3 cut(s)	1046, 1091, 2492
TfiI	GAWTC	9 cut(s)	325, 526, 1443, 1531, 1762, 1946, 2251, 2366, 2375
Tru1I	TTAA	3 cut(s)	296, 1407, 1722
Tru9I	TTAA	3 cut(s)	296, 1407, 1722
TscAI	CASTG	7 cut(s)	19, 349, 1186, 1579, 2145, 2403, 2550
TseFI	GTSAC	4 cut(s)	572, 1126, 2106, 2533
TseI	GCWGC	8 cut(s)	602, 707, 888, 1305, 1580, 1583, 1810, 2173
Tsp45I	GTSAC	4 cut(s)	572, 1126, 2106, 2533
TspDTI	ATGAA	8 cut(s)	183, 447, 834, 1164, 1833, 1888, 1955, 2016
TspGWI	ACGGA	2 cut(s)	652, 740
TspRI	CASTG	7 cut(s)	19, 349, 1186, 1579, 2145, 2403, 2550
Van91I	CCANNNNNTGG	1 cut(s)	1711
VpaK11BI	GGWCC	3 cut(s)	354, 1133, 1544
XapI	RAATTY	3 cut(s)	190, 1484, 2019
XbaI	TCTAGA	1 cut(s)	328
XceI	RCATGY	2 cut(s)	1828, 2345
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2395
XmiI	GTMKAC	1 cut(s)	1641
ZrmI	AGTACT	1 cut(s)	1048
Zsp2I	ATGCAT	2 cut(s)	2248, 2339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.