Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0007917

Physical Location & Seq

Genomic Coordinates Reverse (-)

4720153 .. 4723295

Gene Structure 3143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G004470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGAATTCGTCACTGGCACACACCCAGGTTCTGTTTTCCGAGTTGTTTCTATCTTTTTGATTGTTTTTTGCTCTCTTGCTCTGTTTTGCTCTGCTTCGAGTTCAATCACACAGGGCCAAACTTTAAAAGACGGCGCGACTTTGATCTCCGATGGCCAAACCTTCGAACTGGGATTCTTCAGTCCGGGGAACTCTTCGTCCCGGTACGTGGGTATTTGGTACTACGGCCTTTCAAACCGGACAATCGTTTGGGTCGCAAACAGAGAGAAGCCGATTTCCGATGAAGCTGGAGTGTTAACAATCGGAAGCGATGGTAATCTGGTGATTCGAGATGGAAGCAGCAGTGAAATATGGTCTAGCAATGTTTCATCAATATCCAAGAACACATCTGCAGTCCTGAAAGATACAGGAAGCCTTGTGCTTTCGGCAAATGAAACTACCATGCCTTATTGGGAGAGTTTCGATTTTCCTACGGATACGTTTTTGCCTGGGATGAGAGTGAAGGTGAACGCTAACGAGGGAGTGAATCGTGCTTTCAGGTCTTGGAAATCTGCCAACGATCCAGCTCCAGGTGATTATTTCTCGGGGGTTGATCCTCGAGCAGCACCACAGCTTATGATATGGAATGGTTCAGAAAGAAGATGGAGAAGTGGGCACTGGAACAAGCTGATATTTATTGGTCTTCCCGAAATGCCCACAAGATACGCGGCTGGTTTTAGTCTTACGGATCGGGCAGACCAAAATGGGAGCAACTACTTAACTTACACACCATGGAATGTGTCCAATAAGCTGAGGTTTCAAATTAGGTGGGATGGTTATGAAGAGCAATCTATTTGGGTGGAAGATCAAGATAAGTGGGTTGTTCTTATGTCTCAGCCGAACAAGAGCACAGAGTGTGAGCTTTACAACAAGTGTGGGAACTTCGGGCTTTGCAGTGCATCGGATGCTAGTTGTGATTGTATGCAAGGATTTGAAAGTTGGGGGAATTGGTCAGATGGGTGTTCTAGGAAGCAACATGAAGTGTGCAGAGAAATATTATCCACTCTTGCGATATCTTTATTTTCTGTAGCGGGAGCAATCTTCGTAGCCATCTTCATATTTCTAGTATGGAGGTTCAGAGCAAAACTCAAAGTGTTGCCCACCACTTCAATTTCATGGTTGAGAATCAGTGAAACACCAACACACAATGCTGGCAAGAGCAAAGAATTCTCAACAGAAATGTCAGGATCAATTGACCCTACTGTAGATTGGAATCAAGTAAATGGACCTGATGATTTGCCAGCATTCAGTTTTAACAGTGTAGCAGCTGCTACAGACCACTTTTCTCTAGTAAACAAGCTTGGGAATGGGGGATTTGGTACTGTCTACAAGGGAAACCTTCCAGGACTAGAAGAAATAGCTGTCAAGAGACTTTCGCAAGTATCTTGCCAAGGGTTGGAGGAGTTTAAGAATGAGATCAATTTGATTGCTAAATTGCAGCACAGGAATCTTGTTAGGCTATTAGGCTGTTGCATTGAAGGAGAAGAAAAGATGCTGCTATATGAATACATGCCAAACAAAAGCTTGGATTTCTTTCTTTTCGATGCAACCAGGCAAGCACTACTAAATTGGAGTAAACGCTTCATGATTATTGAAGGGATTGCACGAGGACTCCTGTATCTTCACAGAGATTCTAGACTTCGAATAATTCATCGAGACCTGAAAGCTAGCAACATTTTGTTAGATGAAGATATGATTCCCAAAATTTCTGACTTTGGTATGGCAAGAATATTTGGGGGGAACCAAAACGAAATAAACACAATGAGAGTTGTTGGAACATACGGTTATATGGCACCTGAATATGCAATGGAAGGTCTGTTTTCAGTGAAGTCAGATGTCTATAGCTTTGGGGTATTGCTGCTAGAGATTGTGAGTGGCCGGAGGAACACTAGCTTACGTACCTCAGAACACTTGAGCCTTATTGGATATGCATGGAATCTCTGGAATGCAAATAAAGCAGAGGATCTTATTGATCCTTCCATTGCAGAAACTTGTAATGAAACTGAATTAATCAGATGCATACATGTTGCGTTGTTGTGTGTACAAGATTCCGCAGATTCCAGACCAACCATGTCGGCCGTGGTGTTAATGCTGGAGAGTGAAACTGCAAATCTTCCATTGCCAAGAGAACCCATGTTTACTTCAATTAAGAGATATGTGGATACAACCTTTAGTACAGAAGAAGAAGCCCCTGGTGTAGTATCCGTAAACCATGTCACAATCACAATGGTAGATGGAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

760

Amino Acids

84.85

Weight (kDa)

5.4

Isoelectric Point (pI)

41.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	81 - 183	2.5e-34	D-mannose binding lectin
S_locus_glycop	PF00954	215 - 325	1.2e-23	S-locus glycoprotein domain
Pkinase	PF00069	442 - 647	6.2e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	443 - 708	2.4e-47	Protein tyrosine and serine/threonine kinase
DUF3403	PF11883	713 - 760	5e-08	Domain of unknown function (DUF3403)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61610 AT1G61610 AT4G21390 AT4G21390
fragaria_vesca	FvH4_3g03590 FvH4_3g03590 FvH4_3g03590 FvH4_3g03590 FvH4_3g03590
malus_domestica	MD05G1329600.v1.1 MD10G1306600.v1.1
prunus_persica	Prupe.4G033200_v2.0.a1
pyrus_communis	pycom05g30270 pycom10g25870
rosa_chinensis	RchiOBHm_Chr5g0005641
rosa_laevigata	RLG00000031314
rosa_multiflora	Rmu_co8421279.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070190
rosa_rugosa	Rorug04G0417000
rosa_samantha	Rh5AG044400 Rh5BG043200 Rh5CG052000 Rh5DG043200
rosa_wichuraiana	Rw5G004470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1831
AccB7I	CCANNNNNTGG	1 cut(s)	1435
AccI	GTMKAC	1 cut(s)	1365
AccII	CGCG	2 cut(s)	137, 707
AciI	CCGC	3 cut(s)	707, 1070, 2091
AclWI	GGATC	6 cut(s)	554, 587, 735, 1234, 2006, 2010
AcoI	YGGCCR	3 cut(s)	154, 1915, 2115
AcsI	RAATTY	3 cut(s)	5, 1205, 1743
AcuI	CTGAAG	1 cut(s)	163
AdeI	CACNNNGTG	1 cut(s)	894
AfaI	GTAC	6 cut(s)	206, 221, 1360, 1939, 2082, 2215
AfiI	CCNNNNNNNGG	3 cut(s)	208, 569, 1435
AflIII	ACRYGT	1 cut(s)	2062
AgsI	TTSAA	8 cut(s)	105, 234, 800, 974, 1149, 1517, 1634, 2184
AjnI	CCWGG	6 cut(s)	25, 487, 568, 1381, 1589, 2230
AloI	GAACNNNNNNTCC	2 cut(s)	182, 214
Alw21I	GWGCWC	1 cut(s)	890
Alw26I	GTCTC	3 cut(s)	876, 1402, 1689
AlwI	GGATC	6 cut(s)	554, 587, 735, 1234, 2006, 2010
AlwNI	CAGNNNCTG	1 cut(s)	32
Ama87I	CYCGRG	2 cut(s)	583, 597
AoxI	GGCC	5 cut(s)	115, 154, 226, 1915, 2115
ApeKI	GCWGC	7 cut(s)	339, 602, 1304, 1307, 1477, 1534, 1897
ApoI	RAATTY	3 cut(s)	5, 1205, 1743
AseI	ATTAAT	1 cut(s)	2048
AspLEI	GCGC	1 cut(s)	137
AspS9I	GGNCC	2 cut(s)	115, 1265
AsuC2I	CCSGG	2 cut(s)	186, 202
AsuHPI	GGTGA	3 cut(s)	334, 517, 584
AsuII	TTCGAA	2 cut(s)	165, 1681
AsuNHI	GCTAGC	1 cut(s)	1706
AvaI	CYCGRG	2 cut(s)	583, 597
AvaII	GGWCC	1 cut(s)	1265
BaeGI	GKGCMC	1 cut(s)	657
BaeI	ACNNNNGTAYC	4 cut(s)	196, 229, 1640, 1673
BalI	TGGCCA	1 cut(s)	156
BanI	GGYRCC	1 cut(s)	1831
BauI	CACGAG	1 cut(s)	1644
BbsI	GAAGAC	1 cut(s)	674
Bbv12I	GWGCWC	1 cut(s)	890
BbvCI	CCTCAGC	1 cut(s)	791
BbvI	GCAGC	7 cut(s)	351, 614, 1294, 1316, 1489, 1521, 1884
BccI	CCATC	8 cut(s)	146, 305, 326, 636, 806, 989, 1097, 2267
BceAI	ACGGC	3 cut(s)	148, 241, 2102
BciT130I	CCWGG	6 cut(s)	27, 489, 570, 1383, 1591, 2232
BciVI	GTATCC	3 cut(s)	469, 2194, 2251
BcnI	CCSGG	2 cut(s)	186, 202
BcoDI	GTCTC	3 cut(s)	876, 1402, 1689
BfmI	CTRYAG	5 cut(s)	390, 1065, 1242, 1311, 1879
BfuI	GTATCC	3 cut(s)	469, 2194, 2251
BisI	GCNGC	8 cut(s)	340, 603, 708, 1305, 1308, 1478, 1535, 1898
BlsI	GCNGC	8 cut(s)	341, 604, 709, 1306, 1309, 1479, 1536, 1899
Bme1390I	CCNGG	8 cut(s)	27, 186, 202, 489, 570, 1383, 1591, 2232
Bme18I	GGWCC	1 cut(s)	1265
BmeT110I	CYCGRG	2 cut(s)	583, 597
BmgT120I	GGNCC	2 cut(s)	115, 1265
BmiI	GGNNCC	2 cut(s)	1781, 1833
BmrFI	CCNGG	8 cut(s)	27, 186, 202, 489, 570, 1383, 1591, 2232
BmrI	ACTGGG	1 cut(s)	179
BmsI	GCATC	5 cut(s)	934, 947, 1521, 1573, 2045
BmtI	GCTAGC	1 cut(s)	1710
BmuI	ACTGGG	1 cut(s)	179
BpiI	GAAGAC	1 cut(s)	674
BplI	GAGNNNNNCTC	2 cut(s)	1110, 1142
BpmI	CTGGAG	3 cut(s)	309, 552, 2153
Bpu10I	CCTNAGC	1 cut(s)	791
Bpu14I	TTCGAA	2 cut(s)	165, 1681
BpuEI	CTTGAG	1 cut(s)	1972
BpuMI	CCSGG	2 cut(s)	186, 202
BsaAI	YACGTR	2 cut(s)	208, 1937
BsaBI	GATNNNNATC	2 cut(s)	315, 1251
BsaI	GGTCTC	1 cut(s)	1689
BsaJI	CCNNGG	7 cut(s)	25, 185, 488, 770, 1429, 2118, 2230
BsaWI	WCCGGW	1 cut(s)	237
BsaXI	ACNNNNNCTCC	2 cut(s)	1635, 1665
Bsc4I	CCNNNNNNNGG	3 cut(s)	208, 569, 1435
Bse1I	ACTGG	3 cut(s)	19, 174, 662
Bse3DI	GCAATG	4 cut(s)	367, 1851, 2019, 2156
Bse8I	GATNNNNATC	2 cut(s)	315, 1251
BseBI	CCWGG	6 cut(s)	27, 489, 570, 1383, 1591, 2232
BseDI	CCNNGG	7 cut(s)	25, 185, 488, 770, 1429, 2118, 2230
BseGI	GGATG	3 cut(s)	498, 817, 949
BseJI	GATNNNNATC	2 cut(s)	315, 1251
BseLI	CCNNNNNNNGG	3 cut(s)	208, 569, 1435
BseMI	GCAATG	4 cut(s)	367, 1851, 2019, 2156
BseMII	CTCAG	3 cut(s)	782, 887, 1956
BseNI	ACTGG	3 cut(s)	19, 174, 662
BseRI	GAGGAG	1 cut(s)	1454
BseSI	GKGCMC	1 cut(s)	657
BseX3I	CGGCCG	1 cut(s)	2115
BseXI	GCAGC	7 cut(s)	351, 614, 1294, 1316, 1489, 1521, 1884
BsgI	GTGCAG	1 cut(s)	1045
Bsh1236I	CGCG	2 cut(s)	137, 707
Bsh1285I	CGRYCG	1 cut(s)	2118
BshFI	GGCC	5 cut(s)	117, 156, 228, 1917, 2117
BshNI	GGYRCC	1 cut(s)	1831
BsiEI	CGRYCG	1 cut(s)	2118
BsiHKAI	GWGCWC	1 cut(s)	890
BsiHKCI	CYCGRG	2 cut(s)	583, 597
BsiSI	CCGG	4 cut(s)	185, 202, 238, 1918
BslFI	GGGAC	1 cut(s)	184
BslI	CCNNNNNNNGG	3 cut(s)	208, 569, 1435
BsmAI	GTCTC	3 cut(s)	876, 1402, 1689
BsmFI	GGGAC	1 cut(s)	184
BsmI	GAATGC	2 cut(s)	1283, 1990
BsnI	GGCC	5 cut(s)	117, 156, 228, 1917, 2117
Bso31I	GGTCTC	1 cut(s)	1689
BsoBI	CYCGRG	2 cut(s)	583, 597
Bsp119I	TTCGAA	2 cut(s)	165, 1681
Bsp1286I	GDGCHC	2 cut(s)	657, 890
Bsp1407I	TGTACA	1 cut(s)	2080
Bsp143I	GATC	9 cut(s)	144, 559, 592, 727, 844, 1226, 1455, 2002, 2011
Bsp19I	CCATGG	1 cut(s)	770
BspACI	CCGC	3 cut(s)	707, 1070, 2091
BspANI	GGCC	5 cut(s)	117, 156, 228, 1917, 2117
BspCNI	CTCAG	3 cut(s)	783, 886, 1955
BspFNI	CGCG	2 cut(s)	137, 707
BspHI	TCATGA	1 cut(s)	1623
BspLI	GGNNCC	2 cut(s)	1781, 1833
BspMAI	CTGCAG	1 cut(s)	394
BspOI	GCTAGC	1 cut(s)	1710
BspPI	GGATC	6 cut(s)	554, 587, 735, 1234, 2006, 2010
BspQI	GCTCTTC	1 cut(s)	816
BspT104I	TTCGAA	2 cut(s)	165, 1681
BspT107I	GGYRCC	1 cut(s)	1831
BspTNI	GGTCTC	1 cut(s)	1689
BsrDI	GCAATG	4 cut(s)	367, 1851, 2019, 2156
BsrGI	TGTACA	1 cut(s)	2080
BsrI	ACTGG	3 cut(s)	19, 174, 662
BssECI	CCNNGG	7 cut(s)	25, 185, 488, 770, 1429, 2118, 2230
BssMI	GATC	9 cut(s)	144, 559, 592, 727, 844, 1226, 1455, 2002, 2011
BssSI	CACGAG	1 cut(s)	1644
BssT1I	CCWWGG	2 cut(s)	770, 1429
Bst2BI	CACGAG	1 cut(s)	1644
Bst2UI	CCWGG	6 cut(s)	27, 489, 570, 1383, 1591, 2232
Bst4CI	ACNGT	4 cut(s)	1243, 1298, 1363, 1823
Bst6I	CTCTTC	2 cut(s)	199, 816
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstAUI	TGTACA	1 cut(s)	2080
BstBAI	YACGTR	2 cut(s)	208, 1937
BstBI	TTCGAA	2 cut(s)	165, 1681
BstC8I	GCNNGC	4 cut(s)	1192, 1281, 1596, 1708
BstDEI	CTNAG	3 cut(s)	791, 873, 1942
BstDSI	CCRYGG	2 cut(s)	770, 2118
BstF5I	GGATG	3 cut(s)	498, 817, 949
BstFNI	CGCG	2 cut(s)	137, 707
BstHHI	GCGC	1 cut(s)	137
BstKTI	GATC	9 cut(s)	147, 562, 595, 730, 847, 1229, 1458, 2005, 2014
BstMAI	GTCTC	3 cut(s)	876, 1402, 1689
BstMBI	GATC	9 cut(s)	144, 559, 592, 727, 844, 1226, 1455, 2002, 2011
BstMCI	CGRYCG	1 cut(s)	2118
BstMWI	GCNNNNNNNGC	2 cut(s)	944, 1994
BstNI	CCWGG	6 cut(s)	27, 489, 570, 1383, 1591, 2232
BstNSI	RCATGY	2 cut(s)	1552, 2066
BstSCI	CCNGG	8 cut(s)	25, 184, 200, 487, 568, 1381, 1589, 2230
BstSFI	CTRYAG	5 cut(s)	390, 1065, 1242, 1311, 1879
BstSLI	GKGCMC	1 cut(s)	657
BstSNI	TACGTA	1 cut(s)	1937
BstUI	CGCG	2 cut(s)	137, 707
BstV1I	GCAGC	7 cut(s)	351, 614, 1294, 1316, 1489, 1521, 1884
BstV2I	GAAGAC	1 cut(s)	674
BstX2I	RGATCY	1 cut(s)	2002
BstYI	RGATCY	1 cut(s)	2002
BstZI	CGGCCG	1 cut(s)	2115
BsuI	GTATCC	3 cut(s)	469, 2194, 2251
BsuRI	GGCC	5 cut(s)	117, 156, 228, 1917, 2117
BtgI	CCRYGG	2 cut(s)	770, 2118
BtgZI	GCGATG	1 cut(s)	324
BtsCI	GGATG	3 cut(s)	498, 817, 949
BtsI	GCAGTG	2 cut(s)	349, 940
BtsIMutI	CAGTG	7 cut(s)	12, 349, 655, 940, 1174, 1303, 1869
Cac8I	GCNNGC	4 cut(s)	1192, 1281, 1596, 1708
CaiI	CAGNNNCTG	1 cut(s)	32
CciI	TCATGA	1 cut(s)	1623
CfoI	GCGC	1 cut(s)	137
Cfr13I	GGNCC	2 cut(s)	115, 1265
Csp6I	GTAC	6 cut(s)	205, 220, 1359, 1938, 2081, 2214
CspCI	CAANNNNNGTGG	6 cut(s)	788, 823, 836, 871, 895, 930
CviQI	GTAC	6 cut(s)	205, 220, 1359, 1938, 2081, 2214
DdeI	CTNAG	3 cut(s)	791, 873, 1942
DpnI	GATC	9 cut(s)	146, 561, 594, 729, 846, 1228, 1457, 2004, 2013
DpnII	GATC	9 cut(s)	144, 559, 592, 727, 844, 1226, 1455, 2002, 2011
DraI	TTTAAA	1 cut(s)	126
DraIII	CACNNNGTG	1 cut(s)	894
EaeI	YGGCCR	3 cut(s)	154, 1915, 2115
EagI	CGGCCG	1 cut(s)	2115
Eam1104I	CTCTTC	2 cut(s)	199, 816
EarI	CTCTTC	2 cut(s)	199, 816
EclXI	CGGCCG	1 cut(s)	2115
Eco105I	TACGTA	1 cut(s)	1937
Eco130I	CCWWGG	2 cut(s)	770, 1429
Eco31I	GGTCTC	1 cut(s)	1689
Eco32I	GATATC	1 cut(s)	1053
Eco47I	GGWCC	1 cut(s)	1265
Eco52I	CGGCCG	1 cut(s)	2115
Eco57I	CTGAAG	1 cut(s)	163
Eco88I	CYCGRG	2 cut(s)	583, 597
EcoRI	GAATTC	2 cut(s)	5, 1205
EcoRII	CCWGG	6 cut(s)	25, 487, 568, 1381, 1589, 2230
EcoRV	GATATC	1 cut(s)	1053
EcoT14I	CCWWGG	2 cut(s)	770, 1429
EcoT22I	ATGCAT	2 cut(s)	1972, 2060
ErhI	CCWWGG	2 cut(s)	770, 1429
FaqI	GGGAC	1 cut(s)	184
FauI	CCCGC	1 cut(s)	1063
FblI	GTMKAC	1 cut(s)	1365
Fnu4HI	GCNGC	8 cut(s)	340, 603, 708, 1305, 1308, 1478, 1535, 1898
FokI	GGATG	3 cut(s)	505, 824, 956
Fsp4HI	GCNGC	8 cut(s)	340, 603, 708, 1305, 1308, 1478, 1535, 1898
GlaI	GCGC	1 cut(s)	136
GluI	GCNGC	8 cut(s)	340, 603, 708, 1305, 1308, 1478, 1535, 1898
GsuI	CTGGAG	3 cut(s)	309, 552, 2153
HaeIII	GGCC	5 cut(s)	117, 156, 228, 1917, 2117
HapII	CCGG	4 cut(s)	185, 202, 238, 1918
HhaI	GCGC	1 cut(s)	137
Hin6I	GCGC	1 cut(s)	135
HinP1I	GCGC	1 cut(s)	135
HincII	GTYRAC	1 cut(s)	297
HindII	GTYRAC	1 cut(s)	297
HindIII	AAGCTT	2 cut(s)	1337, 1561
HpaI	GTTAAC	1 cut(s)	297
HpaII	CCGG	4 cut(s)	185, 202, 238, 1918
HphI	GGTGA	3 cut(s)	334, 517, 584
Hpy166II	GTNNAC	8 cut(s)	297, 508, 1333, 1366, 1616, 2081, 2178, 2248
Hpy8I	GTNNAC	8 cut(s)	297, 508, 1333, 1366, 1616, 2081, 2178, 2248
HpyAV	CCTTC	8 cut(s)	172, 496, 1388, 1511, 1628, 1844, 2025, 2271
HpyCH4III	ACNGT	4 cut(s)	1243, 1298, 1363, 1823
HpyCH4IV	ACGT	3 cut(s)	207, 479, 1936
HpyF10VI	GCNNNNNNNGC	2 cut(s)	944, 1994
HpyF3I	CTNAG	3 cut(s)	791, 873, 1942
HpySE526I	ACGT	3 cut(s)	207, 479, 1936
HspAI	GCGC	1 cut(s)	135
KspAI	GTTAAC	1 cut(s)	297
Kzo9I	GATC	9 cut(s)	144, 559, 592, 727, 844, 1226, 1455, 2002, 2011
LguI	GCTCTTC	1 cut(s)	816
LmnI	GCTCC	3 cut(s)	571, 747, 1073
Lsp1109I	GCAGC	7 cut(s)	351, 614, 1294, 1316, 1489, 1521, 1884
LweI	GCATC	5 cut(s)	934, 947, 1521, 1573, 2045
MaeII	ACGT	3 cut(s)	207, 479, 1936
MaeIII	GTNAC	2 cut(s)	10, 2254
MalI	GATC	9 cut(s)	146, 561, 594, 729, 846, 1228, 1457, 2004, 2013
MboI	GATC	9 cut(s)	144, 559, 592, 727, 844, 1226, 1455, 2002, 2011
MfeI	CAATTG	1 cut(s)	1230
MflI	RGATCY	1 cut(s)	2002
MhlI	GDGCHC	2 cut(s)	657, 890
MlsI	TGGCCA	1 cut(s)	156
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	1 cut(s)	1644
MmeI	TCCRAC	2 cut(s)	1416, 1792
MnlI	CCTC	9 cut(s)	511, 606, 786, 1104, 1432, 1640, 1914, 1951, 1993
Mox20I	TGGCCA	1 cut(s)	156
Mph1103I	ATGCAT	2 cut(s)	1972, 2060
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	8 cut(s)	125, 296, 758, 1293, 1446, 2048, 2126, 2187
Msp20I	TGGCCA	1 cut(s)	156
MspA1I	CMGCKG	1 cut(s)	1307
MspI	CCGG	4 cut(s)	185, 202, 238, 1918
MspR9I	CCNGG	8 cut(s)	27, 186, 202, 489, 570, 1383, 1591, 2232
MunI	CAATTG	1 cut(s)	1230
Mva1269I	GAATGC	2 cut(s)	1283, 1990
MvaI	CCWGG	6 cut(s)	27, 489, 570, 1383, 1591, 2232
MvnI	CGCG	2 cut(s)	137, 707
MwoI	GCNNNNNNNGC	2 cut(s)	944, 1994
NciI	CCSGG	2 cut(s)	186, 202
NcoI	CCATGG	1 cut(s)	770
NdeII	GATC	9 cut(s)	144, 559, 592, 727, 844, 1226, 1455, 2002, 2011
NheI	GCTAGC	1 cut(s)	1706
NlaIV	GGNNCC	2 cut(s)	1781, 1833
NmuCI	GTSAC	2 cut(s)	10, 2254
NsiI	ATGCAT	2 cut(s)	1972, 2060
NspI	RCATGY	2 cut(s)	1552, 2066
NspV	TTCGAA	2 cut(s)	165, 1681
PaeR7I	CTCGAG	1 cut(s)	597
PagI	TCATGA	1 cut(s)	1623
PciI	ACATGT	1 cut(s)	2062
PciSI	GCTCTTC	1 cut(s)	816
PctI	GAATGC	2 cut(s)	1283, 1990
PflMI	CCANNNNNTGG	1 cut(s)	1435
PfoI	TCCNGGA	1 cut(s)	1381
PkrI	GCNGC	8 cut(s)	341, 604, 709, 1306, 1309, 1479, 1536, 1899
PleI	GAGTC	1 cut(s)	1644
PpsI	GAGTC	1 cut(s)	1644
Ppu21I	YACGTR	2 cut(s)	208, 1937
PscI	ACATGT	1 cut(s)	2062
PshBI	ATTAAT	1 cut(s)	2048
Psp6I	CCWGG	6 cut(s)	25, 487, 568, 1381, 1589, 2230
PspGI	CCWGG	6 cut(s)	25, 487, 568, 1381, 1589, 2230
PspN4I	GGNNCC	2 cut(s)	1781, 1833
PspPI	GGNCC	2 cut(s)	115, 1265
PspXI	VCTCGAGB	1 cut(s)	597
PstI	CTGCAG	1 cut(s)	394
PstNI	CAGNNNCTG	1 cut(s)	32
PsuI	RGATCY	1 cut(s)	2002
PvuII	CAGCTG	1 cut(s)	1307
RsaI	GTAC	6 cut(s)	206, 221, 1360, 1939, 2082, 2215
RsaNI	GTAC	6 cut(s)	205, 220, 1359, 1938, 2081, 2214
SapI	GCTCTTC	1 cut(s)	816
SaqAI	TTAA	8 cut(s)	125, 296, 758, 1293, 1446, 2048, 2126, 2187
SatI	GCNGC	8 cut(s)	340, 603, 708, 1305, 1308, 1478, 1535, 1898
Sau3AI	GATC	9 cut(s)	144, 559, 592, 727, 844, 1226, 1455, 2002, 2011
Sau96I	GGNCC	2 cut(s)	115, 1265
SchI	GAGTC	1 cut(s)	1644
ScrFI	CCNGG	8 cut(s)	27, 186, 202, 489, 570, 1383, 1591, 2232
SduI	GDGCHC	2 cut(s)	657, 890
SfaNI	GCATC	5 cut(s)	934, 947, 1521, 1573, 2045
SfcI	CTRYAG	5 cut(s)	390, 1065, 1242, 1311, 1879
Sfr274I	CTCGAG	1 cut(s)	597
SfuI	TTCGAA	2 cut(s)	165, 1681
SinI	GGWCC	1 cut(s)	1265
SlaI	CTCGAG	1 cut(s)	597
SmlI	CTYRAG	2 cut(s)	597, 1951
SmoI	CTYRAG	2 cut(s)	597, 1951
SnaBI	TACGTA	1 cut(s)	1937
SsiI	CCGC	3 cut(s)	707, 1070, 2091
SspI	AATATT	2 cut(s)	1035, 1770
StyD4I	CCNGG	8 cut(s)	25, 184, 200, 487, 568, 1381, 1589, 2230
StyI	CCWWGG	2 cut(s)	770, 1429
TaaI	ACNGT	4 cut(s)	1243, 1298, 1363, 1823
TaiI	ACGT	3 cut(s)	210, 482, 1939
TaqI	TCGA	8 cut(s)	98, 165, 328, 462, 598, 1581, 1681, 1693
TatI	WGTACW	2 cut(s)	2080, 2213
TauI	GCSGC	1 cut(s)	710
Tru1I	TTAA	8 cut(s)	125, 296, 758, 1293, 1446, 2048, 2126, 2187
Tru9I	TTAA	8 cut(s)	125, 296, 758, 1293, 1446, 2048, 2126, 2187
TscAI	CASTG	7 cut(s)	19, 349, 662, 940, 1174, 1303, 1869
TseFI	GTSAC	2 cut(s)	10, 2254
TseI	GCWGC	7 cut(s)	339, 602, 1304, 1307, 1477, 1534, 1897
Tsp45I	GTSAC	2 cut(s)	10, 2254
TspGWI	ACGGA	3 cut(s)	488, 740, 2233
TspRI	CASTG	7 cut(s)	19, 349, 662, 940, 1174, 1303, 1869
Van91I	CCANNNNNTGG	1 cut(s)	1435
VpaK11BI	GGWCC	1 cut(s)	1265
VspI	ATTAAT	1 cut(s)	2048
XapI	RAATTY	3 cut(s)	5, 1205, 1743
XbaI	TCTAGA	1 cut(s)	1673
XceI	RCATGY	2 cut(s)	1552, 2066
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2116
XhoI	CTCGAG	1 cut(s)	597
XmiI	GTMKAC	1 cut(s)	1365
Zsp2I	ATGCAT	2 cut(s)	1972, 2060

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.