Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0007917

Physical Location & Seq

Genomic Coordinates Reverse (-)

3585728 .. 3590062

Gene Structure 4335 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG043200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGAATTCGTCACTGGCACACACCCAGGTTCTGTTTTCCAAGTTGTTTCTATCTTTTTGATTGTTTTTTGCTCTCTTGCTCTGTTTTGCTCTGCTTCGAGTTCAATCACACAGGGCCAAACTTTAAAAGACGGCGCGACTTTGATATCCGATGGCCAAACCTTCGAACTGGGATTCTTCAGTCCGGGGAACTCTTCGTCCCGGTACGTGGGTATTTGGTACTACAACCTTTCAAACCAGACAATCGTTTGGGTCGCAAACAGAGAGAAGCCGATTTCCGATAAAGCTGGAGTGTTAACAATCGGAAGCGACGGTAATCTGGTGATTCGAGATGGAAACAGCGGTGAAATCTGGTCTAGCAATGTTTCATCAATATCCAAGAACACATCTGCAGTCCTGAAAGATATGGGAAACCTTGTGCTTTCGGCAAATGAAACTACCATGCCTTATTGGGATAGTTTCGATTTTCCTACGGATACGTTTTTGCCTGGGATGAGAGTGAAGGTGAACGCTAACGAGGGAGTGAATCGTGCTTTCAGGTCTTGGAAATCTGCCAACGATCCAGCTCCAGGTGATTATTTCTCGGGGGTTGATCCTCGAGCAGCACTACAGCTTATGATATGGAATGGTTCAGAAAGAAGATGGAGGAGTGGGCACTGGAACAAGCTGATATTTATTGGTCTTCCGGAAATGCCCACAAGATACTCGGCTGGTTTTAGTCTTACGGATCGGGCAGACCAAAATGGGAGCAACTACTTATCTTACACACCATGGAATGTGTCCGATAAGTTGAGGTTTCAAATTAGGTGGGATGGTTATGAAGAGCAATCTATTTGGGTGGAAGATAAAAATGAGTGGGTTGTTCTTATGTCTCAGCCGAACAAGAGCACCGAGTGTGAGCTTTACAACAGGTGCGGGAACTTCGGGCTTTGTAGTGCATCGGATGCTAGTTGTGATTGTATGCAAGGATTTGAAAGAAAAAATTTGGGTAATTGGTCAGATGGGTGTTCTAGAAAGACTCCATTGAAGTGTCAGAGAAATAGTACTACTGATGAAGATGGTGAGGATGGTTTTGTGGCGGTGAAGTGTACAAAGGTGCCGGATTTTGCAGACTTGGTGGTGTCGACAGGTCCACAGGTGTCTTGTGAGCAGTCTTGTTTGAACAATTGTTCTTGCACTGCTTATGCAGATGTTTCTGGACTTGGTTGTATGCTTTGGACAACTGAGTTGGTGGATGTGCAGCAGTTTTCAAAGGGAGGAAACACCTTGTATGTTCGTGTTGCTCATGCCGATTTAGGTGGCAGCAAAAAGTTATCCACTCTTGCGATATCTTTATTTTCTGTAGGGGGAGCAAGCTTCGTAGCTATCTTCATATTTCTTGTATGGATGTTCAGAGCAAAACTTAAAGTGTTGCCCACTACTTCAATTCCATGGTTGAGAATCAGTGAAACACCAACACACAATGCTGGCAAGAGCAAAGAATTCTCAACAGAAATGTCAGGATCAGTTGACCCTACTGTAGACGGGAATCAAGTAACTGGACTTGATGATTTGCCATCATTCAGTTTTAACAGTGTAGCTGCTGCTACAGACCACTTTTCTCTAGTAAACAAGCTTGGGAATGGGGGATTTGGTACTGTCTACAAGGGAAACCTTCCAGGACTAGAAGAAATAGCTGTCAAGAGACTTTCGCAAGTATCTTGCCAAGGGTTGGAGGAGTTTAAGAATGAGATCAATTTGATTGCTAAATTGCAGCACAGGAATCTTGTTAGGCTATTAGGCTGTTGCATTGAAGGAGAAGAAAAGATGCTGCTATATGAATACATGCCAAACAAAAGCTTGGATTTCTTTCTTTTCGGTATGTTCTCTTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

624

Amino Acids

68.78

Weight (kDa)

5.27

Isoelectric Point (pI)

34.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	81 - 183	9.7e-35	D-mannose binding lectin
S_locus_glycop	PF00954	215 - 327	9.9e-25	S-locus glycoprotein domain
PAN_2	PF08276	353 - 413	5.5e-16	PAN-like domain
Pkinase	PF00069	534 - 616	5.4e-11	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	535 - 618	7e-15	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61610 AT1G61610 AT4G21390 AT4G21390
fragaria_vesca	FvH4_3g03590 FvH4_3g03590 FvH4_3g03590 FvH4_3g03590 FvH4_3g03590
malus_domestica	MD05G1329600.v1.1 MD10G1306600.v1.1
prunus_persica	Prupe.4G033200_v2.0.a1
pyrus_communis	pycom05g30270 pycom10g25870
rosa_chinensis	RchiOBHm_Chr5g0005641
rosa_laevigata	RLG00000031314
rosa_multiflora	Rmu_co8421279.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070190
rosa_rugosa	Rorug04G0417000
rosa_samantha	Rh5AG044400 Rh5BG043200 Rh5CG052000 Rh5DG043200
rosa_wichuraiana	Rw5G004470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1096
AccB7I	CCANNNNNTGG	1 cut(s)	1711
AccI	GTMKAC	3 cut(s)	1124, 1521, 1641
AccII	CGCG	1 cut(s)	137
AccIII	TCCGGA	1 cut(s)	685
AciI	CCGC	3 cut(s)	342, 915, 1079
AclWI	GGATC	4 cut(s)	554, 587, 735, 1510
AcoI	YGGCCR	1 cut(s)	154
AcsI	RAATTY	3 cut(s)	5, 982, 1481
AcuI	CTGAAG	1 cut(s)	163
AdeI	CACNNNGTG	1 cut(s)	894
AfaI	GTAC	5 cut(s)	206, 221, 1045, 1090, 1636
AfiI	CCNNNNNNNGG	3 cut(s)	208, 569, 1711
AgsI	TTSAA	9 cut(s)	105, 234, 800, 974, 1027, 1162, 1251, 1425, 1793
AjnI	CCWGG	4 cut(s)	25, 487, 568, 1657
AloI	GAACNNNNNNTCC	2 cut(s)	182, 214
Alw21I	GWGCWC	1 cut(s)	890
Alw26I	GTCTC	2 cut(s)	876, 1678
AlwI	GGATC	4 cut(s)	554, 587, 735, 1510
AlwNI	CAGNNNCTG	1 cut(s)	32
Ama87I	CYCGRG	2 cut(s)	583, 597
Aor13HI	TCCGGA	1 cut(s)	685
AoxI	GGCC	2 cut(s)	115, 154
ApeKI	GCWGC	7 cut(s)	602, 1240, 1302, 1580, 1583, 1753, 1810
ApoI	RAATTY	3 cut(s)	5, 982, 1481
AspLEI	GCGC	1 cut(s)	137
AspS9I	GGNCC	2 cut(s)	115, 1130
AsuC2I	CCSGG	2 cut(s)	186, 202
AsuHPI	GGTGA	6 cut(s)	334, 356, 517, 584, 1073, 1093
AsuII	TTCGAA	1 cut(s)	165
AvaI	CYCGRG	2 cut(s)	583, 597
AvaII	GGWCC	1 cut(s)	1130
BaeGI	GKGCMC	1 cut(s)	657
BaeI	ACNNNNGTAYC	2 cut(s)	196, 229
BalI	TGGCCA	1 cut(s)	156
BanI	GGYRCC	1 cut(s)	1096
BbsI	GAAGAC	1 cut(s)	674
Bbv12I	GWGCWC	1 cut(s)	890
BbvI	GCAGC	7 cut(s)	614, 1252, 1314, 1567, 1570, 1765, 1797
BccI	CCATC	8 cut(s)	146, 326, 636, 806, 995, 1052, 1061, 1564
BceAI	ACGGC	1 cut(s)	148
BciT130I	CCWGG	4 cut(s)	27, 489, 570, 1659
BciVI	GTATCC	1 cut(s)	469
BcnI	CCSGG	2 cut(s)	186, 202
BcoDI	GTCTC	2 cut(s)	876, 1678
BfaI	CTAG	5 cut(s)	357, 948, 1011, 1604, 1664
BfmI	CTRYAG	5 cut(s)	390, 608, 1341, 1518, 1587
BfuI	GTATCC	1 cut(s)	469
BisI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
BlsI	GCNGC	7 cut(s)	604, 1242, 1304, 1582, 1585, 1755, 1812
BmcAI	AGTACT	1 cut(s)	1045
Bme1390I	CCNGG	6 cut(s)	27, 186, 202, 489, 570, 1659
Bme18I	GGWCC	1 cut(s)	1130
BmeT110I	CYCGRG	2 cut(s)	583, 597
BmgT120I	GGNCC	2 cut(s)	115, 1130
BmiI	GGNNCC	1 cut(s)	1098
BmrFI	CCNGG	6 cut(s)	27, 186, 202, 489, 570, 1659
BmrI	ACTGGG	1 cut(s)	179
BmsI	GCATC	3 cut(s)	934, 947, 1797
BmuI	ACTGGG	1 cut(s)	179
BpiI	GAAGAC	1 cut(s)	674
BpmI	CTGGAG	2 cut(s)	309, 552
Bpu14I	TTCGAA	1 cut(s)	165
BpuMI	CCSGG	2 cut(s)	186, 202
BsaAI	YACGTR	1 cut(s)	208
BsaJI	CCNNGG	6 cut(s)	25, 185, 488, 770, 1430, 1705
BsaWI	WCCGGW	1 cut(s)	685
Bsc4I	CCNNNNNNNGG	3 cut(s)	208, 569, 1711
Bse1I	ACTGG	4 cut(s)	19, 174, 662, 1543
Bse3DI	GCAATG	1 cut(s)	367
BseAI	TCCGGA	1 cut(s)	685
BseBI	CCWGG	4 cut(s)	27, 489, 570, 1659
BseDI	CCNNGG	6 cut(s)	25, 185, 488, 770, 1430, 1705
BseGI	GGATG	6 cut(s)	498, 817, 949, 1072, 1240, 1392
BseLI	CCNNNNNNNGG	3 cut(s)	208, 569, 1711
BseMI	GCAATG	1 cut(s)	367
BseMII	CTCAG	2 cut(s)	887, 1215
BseNI	ACTGG	4 cut(s)	19, 174, 662, 1543
BseRI	GAGGAG	2 cut(s)	661, 1730
BseSI	GKGCMC	1 cut(s)	657
BseXI	GCAGC	7 cut(s)	614, 1252, 1314, 1567, 1570, 1765, 1797
BsgI	GTGCAG	1 cut(s)	1259
Bsh1236I	CGCG	1 cut(s)	137
BshFI	GGCC	2 cut(s)	117, 156
BshNI	GGYRCC	1 cut(s)	1096
BsiHKAI	GWGCWC	1 cut(s)	890
BsiHKCI	CYCGRG	2 cut(s)	583, 597
BsiSI	CCGG	4 cut(s)	185, 202, 686, 1100
BslFI	GGGAC	1 cut(s)	184
BslI	CCNNNNNNNGG	3 cut(s)	208, 569, 1711
BsmAI	GTCTC	2 cut(s)	876, 1678
BsmFI	GGGAC	1 cut(s)	184
BsnI	GGCC	2 cut(s)	117, 156
BsoBI	CYCGRG	2 cut(s)	583, 597
Bsp119I	TTCGAA	1 cut(s)	165
Bsp1286I	GDGCHC	2 cut(s)	657, 890
Bsp13I	TCCGGA	1 cut(s)	685
Bsp1407I	TGTACA	1 cut(s)	1088
Bsp143I	GATC	5 cut(s)	559, 592, 727, 1502, 1731
Bsp19I	CCATGG	2 cut(s)	770, 1430
BspACI	CCGC	3 cut(s)	342, 915, 1079
BspANI	GGCC	2 cut(s)	117, 156
BspCNI	CTCAG	2 cut(s)	886, 1216
BspEI	TCCGGA	1 cut(s)	685
BspFNI	CGCG	1 cut(s)	137
BspLI	GGNNCC	1 cut(s)	1098
BspMAI	CTGCAG	1 cut(s)	394
BspPI	GGATC	4 cut(s)	554, 587, 735, 1510
BspQI	GCTCTTC	1 cut(s)	816
BspT104I	TTCGAA	1 cut(s)	165
BspT107I	GGYRCC	1 cut(s)	1096
BsrDI	GCAATG	1 cut(s)	367
BsrGI	TGTACA	1 cut(s)	1088
BsrI	ACTGG	4 cut(s)	19, 174, 662, 1543
BssECI	CCNNGG	6 cut(s)	25, 185, 488, 770, 1430, 1705
BssMI	GATC	5 cut(s)	559, 592, 727, 1502, 1731
BssT1I	CCWWGG	3 cut(s)	770, 1430, 1705
Bst2UI	CCWGG	4 cut(s)	27, 489, 570, 1659
Bst4CI	ACNGT	4 cut(s)	314, 1519, 1574, 1639
Bst6I	CTCTTC	2 cut(s)	199, 816
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstAUI	TGTACA	1 cut(s)	1088
BstBAI	YACGTR	1 cut(s)	208
BstBI	TTCGAA	1 cut(s)	165
BstC8I	GCNNGC	2 cut(s)	1354, 1468
BstDEI	CTNAG	2 cut(s)	873, 1224
BstDSI	CCRYGG	2 cut(s)	770, 1430
BstF5I	GGATG	6 cut(s)	498, 817, 949, 1072, 1240, 1392
BstFNI	CGCG	1 cut(s)	137
BstHHI	GCGC	1 cut(s)	137
BstKTI	GATC	5 cut(s)	562, 595, 730, 1505, 1734
BstMAI	GTCTC	2 cut(s)	876, 1678
BstMBI	GATC	5 cut(s)	559, 592, 727, 1502, 1731
BstMWI	GCNNNNNNNGC	1 cut(s)	944
BstNI	CCWGG	4 cut(s)	27, 489, 570, 1659
BstNSI	RCATGY	1 cut(s)	1828
BstSCI	CCNGG	6 cut(s)	25, 184, 200, 487, 568, 1657
BstSFI	CTRYAG	5 cut(s)	390, 608, 1341, 1518, 1587
BstSLI	GKGCMC	1 cut(s)	657
BstUI	CGCG	1 cut(s)	137
BstV1I	GCAGC	7 cut(s)	614, 1252, 1314, 1567, 1570, 1765, 1797
BstV2I	GAAGAC	1 cut(s)	674
BsuI	GTATCC	1 cut(s)	469
BsuRI	GGCC	2 cut(s)	117, 156
BtgI	CCRYGG	2 cut(s)	770, 1430
BtsCI	GGATG	6 cut(s)	498, 817, 949, 1072, 1240, 1392
BtsI	GCAGTG	1 cut(s)	1176
BtsIMutI	CAGTG	5 cut(s)	12, 655, 1176, 1450, 1579
Cac8I	GCNNGC	2 cut(s)	1354, 1468
CaiI	CAGNNNCTG	1 cut(s)	32
CfoI	GCGC	1 cut(s)	137
Cfr13I	GGNCC	2 cut(s)	115, 1130
Csp6I	GTAC	5 cut(s)	205, 220, 1044, 1089, 1635
CspCI	CAANNNNNGTGG	2 cut(s)	788, 823
CviAII	CATG	5 cut(s)	442, 771, 1286, 1431, 1825
CviQI	GTAC	5 cut(s)	205, 220, 1044, 1089, 1635
DdeI	CTNAG	2 cut(s)	873, 1224
DpnI	GATC	5 cut(s)	561, 594, 729, 1504, 1733
DpnII	GATC	5 cut(s)	559, 592, 727, 1502, 1731
DraI	TTTAAA	1 cut(s)	126
DraIII	CACNNNGTG	1 cut(s)	894
EaeI	YGGCCR	1 cut(s)	154
Eam1104I	CTCTTC	2 cut(s)	199, 816
EarI	CTCTTC	2 cut(s)	199, 816
Eco130I	CCWWGG	3 cut(s)	770, 1430, 1705
Eco32I	GATATC	2 cut(s)	147, 1329
Eco47I	GGWCC	1 cut(s)	1130
Eco57I	CTGAAG	1 cut(s)	163
Eco88I	CYCGRG	2 cut(s)	583, 597
EcoRI	GAATTC	2 cut(s)	5, 1481
EcoRII	CCWGG	4 cut(s)	25, 487, 568, 1657
EcoRV	GATATC	2 cut(s)	147, 1329
EcoT14I	CCWWGG	3 cut(s)	770, 1430, 1705
ErhI	CCWWGG	3 cut(s)	770, 1430, 1705
FaeI	CATG	5 cut(s)	445, 774, 1289, 1434, 1828
FaqI	GGGAC	1 cut(s)	184
FatI	CATG	5 cut(s)	441, 770, 1285, 1430, 1824
FauI	CCCGC	1 cut(s)	908
FblI	GTMKAC	3 cut(s)	1124, 1521, 1641
Fnu4HI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
FokI	GGATG	6 cut(s)	505, 824, 956, 1079, 1247, 1399
Fsp4HI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
FspBI	CTAG	5 cut(s)	357, 948, 1011, 1604, 1664
GlaI	GCGC	1 cut(s)	136
GluI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
GsuI	CTGGAG	2 cut(s)	309, 552
HaeIII	GGCC	2 cut(s)	117, 156
HapII	CCGG	4 cut(s)	185, 202, 686, 1100
HhaI	GCGC	1 cut(s)	137
Hin1II	CATG	5 cut(s)	445, 774, 1289, 1434, 1828
Hin6I	GCGC	1 cut(s)	135
HinP1I	GCGC	1 cut(s)	135
HincII	GTYRAC	3 cut(s)	297, 1125, 1510
HindII	GTYRAC	3 cut(s)	297, 1125, 1510
HindIII	AAGCTT	3 cut(s)	1354, 1613, 1837
HinfI	GANTC	7 cut(s)	174, 325, 526, 1018, 1440, 1528, 1762
HpaI	GTTAAC	1 cut(s)	297
HpaII	CCGG	4 cut(s)	185, 202, 686, 1100
HphI	GGTGA	6 cut(s)	334, 356, 517, 584, 1073, 1093
Hpy166II	GTNNAC	9 cut(s)	297, 508, 1089, 1125, 1133, 1510, 1522, 1609, 1642
Hpy188I	TCNGA	9 cut(s)	151, 280, 305, 634, 784, 943, 1000, 1035, 1394
Hpy188III	TCNNGA	7 cut(s)	329, 397, 686, 1011, 1197, 1500, 1681
Hpy8I	GTNNAC	9 cut(s)	297, 508, 1089, 1125, 1133, 1510, 1522, 1609, 1642
Hpy99I	CGWCG	1 cut(s)	314
HpyAV	CCTTC	4 cut(s)	172, 496, 1664, 1787
HpyCH4III	ACNGT	4 cut(s)	314, 1519, 1574, 1639
HpyCH4IV	ACGT	2 cut(s)	207, 479
HpyCH4V	TGCA	9 cut(s)	392, 938, 964, 1109, 1176, 1187, 1240, 1753, 1788
HpyF10VI	GCNNNNNNNGC	1 cut(s)	944
HpyF3I	CTNAG	2 cut(s)	873, 1224
HpySE526I	ACGT	2 cut(s)	207, 479
Hsp92II	CATG	5 cut(s)	445, 774, 1289, 1434, 1828
HspAI	GCGC	1 cut(s)	135
Kpn2I	TCCGGA	1 cut(s)	685
KspAI	GTTAAC	1 cut(s)	297
Kzo9I	GATC	5 cut(s)	559, 592, 727, 1502, 1731
LguI	GCTCTTC	1 cut(s)	816
LmnI	GCTCC	3 cut(s)	571, 747, 1349
Lsp1109I	GCAGC	7 cut(s)	614, 1252, 1314, 1567, 1570, 1765, 1797
LweI	GCATC	3 cut(s)	934, 947, 1797
MaeI	CTAG	5 cut(s)	357, 948, 1011, 1604, 1664
MaeII	ACGT	2 cut(s)	207, 479
MaeIII	GTNAC	2 cut(s)	10, 1534
MalI	GATC	5 cut(s)	561, 594, 729, 1504, 1733
MboI	GATC	5 cut(s)	559, 592, 727, 1502, 1731
MfeI	CAATTG	1 cut(s)	1165
MhlI	GDGCHC	2 cut(s)	657, 890
MlsI	TGGCCA	1 cut(s)	156
MluCI	AATT	9 cut(s)	5, 801, 982, 991, 1165, 1425, 1481, 1735, 1748
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	1 cut(s)	1012
MmeI	TCCRAC	1 cut(s)	1692
MnlI	CCTC	7 cut(s)	511, 606, 639, 786, 1057, 1250, 1708
Mox20I	TGGCCA	1 cut(s)	156
MroI	TCCGGA	1 cut(s)	685
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	5 cut(s)	125, 296, 1404, 1569, 1722
MslI	CAYNNNNRTG	1 cut(s)	1027
Msp20I	TGGCCA	1 cut(s)	156
MspA1I	CMGCKG	1 cut(s)	342
MspI	CCGG	4 cut(s)	185, 202, 686, 1100
MspR9I	CCNGG	6 cut(s)	27, 186, 202, 489, 570, 1659
MunI	CAATTG	1 cut(s)	1165
MvaI	CCWGG	4 cut(s)	27, 489, 570, 1659
MvnI	CGCG	1 cut(s)	137
MwoI	GCNNNNNNNGC	1 cut(s)	944
NciI	CCSGG	2 cut(s)	186, 202
NcoI	CCATGG	2 cut(s)	770, 1430
NdeII	GATC	5 cut(s)	559, 592, 727, 1502, 1731
NlaIII	CATG	5 cut(s)	445, 774, 1289, 1434, 1828
NlaIV	GGNNCC	1 cut(s)	1098
NmeAIII	GCCGAG	1 cut(s)	686
NmuCI	GTSAC	1 cut(s)	10
NspI	RCATGY	1 cut(s)	1828
NspV	TTCGAA	1 cut(s)	165
PaeR7I	CTCGAG	1 cut(s)	597
PciSI	GCTCTTC	1 cut(s)	816
PfeI	GAWTC	6 cut(s)	174, 325, 526, 1440, 1528, 1762
PflMI	CCANNNNNTGG	1 cut(s)	1711
PfoI	TCCNGGA	1 cut(s)	1657
PkrI	GCNGC	7 cut(s)	604, 1242, 1304, 1582, 1585, 1755, 1812
PleI	GAGTC	1 cut(s)	1012
PpsI	GAGTC	1 cut(s)	1012
Ppu21I	YACGTR	1 cut(s)	208
Psp6I	CCWGG	4 cut(s)	25, 487, 568, 1657
PspGI	CCWGG	4 cut(s)	25, 487, 568, 1657
PspN4I	GGNNCC	1 cut(s)	1098
PspPI	GGNCC	2 cut(s)	115, 1130
PspXI	VCTCGAGB	1 cut(s)	597
PstI	CTGCAG	1 cut(s)	394
PstNI	CAGNNNCTG	1 cut(s)	32
RsaI	GTAC	5 cut(s)	206, 221, 1045, 1090, 1636
RsaNI	GTAC	5 cut(s)	205, 220, 1044, 1089, 1635
RseI	CAYNNNNRTG	1 cut(s)	1027
SalI	GTCGAC	1 cut(s)	1123
SapI	GCTCTTC	1 cut(s)	816
SaqAI	TTAA	5 cut(s)	125, 296, 1404, 1569, 1722
SatI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
Sau3AI	GATC	5 cut(s)	559, 592, 727, 1502, 1731
Sau96I	GGNCC	2 cut(s)	115, 1130
ScaI	AGTACT	1 cut(s)	1045
SchI	GAGTC	1 cut(s)	1012
ScrFI	CCNGG	6 cut(s)	27, 186, 202, 489, 570, 1659
SduI	GDGCHC	2 cut(s)	657, 890
SfaNI	GCATC	3 cut(s)	934, 947, 1797
SfcI	CTRYAG	5 cut(s)	390, 608, 1341, 1518, 1587
Sfr274I	CTCGAG	1 cut(s)	597
SfuI	TTCGAA	1 cut(s)	165
SinI	GGWCC	1 cut(s)	1130
SlaI	CTCGAG	1 cut(s)	597
SmiMI	CAYNNNNRTG	1 cut(s)	1027
SmlI	CTYRAG	1 cut(s)	597
SmoI	CTYRAG	1 cut(s)	597
Sse9I	AATT	9 cut(s)	5, 801, 982, 991, 1165, 1425, 1481, 1735, 1748
SsiI	CCGC	3 cut(s)	342, 915, 1079
SspMI	CTAG	5 cut(s)	357, 948, 1011, 1604, 1664
StyD4I	CCNGG	6 cut(s)	25, 184, 200, 487, 568, 1657
StyI	CCWWGG	3 cut(s)	770, 1430, 1705
TaaI	ACNGT	4 cut(s)	314, 1519, 1574, 1639
TaiI	ACGT	2 cut(s)	210, 482
TaqI	TCGA	6 cut(s)	98, 165, 328, 462, 598, 1124
TasI	AATT	9 cut(s)	5, 801, 982, 991, 1165, 1425, 1481, 1735, 1748
TatI	WGTACW	2 cut(s)	1043, 1088
TfiI	GAWTC	6 cut(s)	174, 325, 526, 1440, 1528, 1762
Tru1I	TTAA	5 cut(s)	125, 296, 1404, 1569, 1722
Tru9I	TTAA	5 cut(s)	125, 296, 1404, 1569, 1722
TscAI	CASTG	5 cut(s)	19, 662, 1183, 1450, 1579
TseFI	GTSAC	1 cut(s)	10
TseI	GCWGC	7 cut(s)	602, 1240, 1302, 1580, 1583, 1753, 1810
Tsp45I	GTSAC	1 cut(s)	10
TspDTI	ATGAA	6 cut(s)	357, 447, 834, 1068, 1360, 1833
TspGWI	ACGGA	2 cut(s)	488, 740
TspRI	CASTG	5 cut(s)	19, 662, 1183, 1450, 1579
Van91I	CCANNNNNTGG	1 cut(s)	1711
VpaK11BI	GGWCC	1 cut(s)	1130
XapI	RAATTY	3 cut(s)	5, 982, 1481
XbaI	TCTAGA	1 cut(s)	1010
XceI	RCATGY	1 cut(s)	1828
XhoI	CTCGAG	1 cut(s)	597
XmiI	GTMKAC	3 cut(s)	1124, 1521, 1641
XspI	CTAG	5 cut(s)	357, 948, 1011, 1604, 1664
ZrmI	AGTACT	1 cut(s)	1045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.