Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0007917

Physical Location & Seq

Genomic Coordinates Reverse (-)

4039017 .. 4042560

Gene Structure 3544 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031314

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGAATTCGTCACTGGTGCACACCCAGGCTCTGTTTTCCAAGGTGTTTCTATCTTTTTGATTGTTTTTTGCTCTCTTGCTCTGTTTTGCTCTGCTTTGAGTTCAATCACACAGGGCCAGCCTTTAAAAGACGGCGACACTTTGATCTCCAATAACCAAACCTTCGAACTGGGATTCTTCAGTCCGGGGAACTCTTCGTCCCGGTACGTGGGTATTTGGTACTACAACCTTTCAAACCGGACAATCGTTTGGGTCGCAAACAGAGAGAAGCCGATTTCCGGTAAAGCTGGAGTGTTAACAATCGGAAGCGATGGTAATCTGGTGATTCGAGATGGAAACAGCAGTGAAATCTGGTCTAGCAATGTTTCATCAATATCCAAGAACACATCTGCAGTCCTGAAAGATATGGGAAACCTTGTGCTTTCGGCAAATGAAACGACCATGCCTTATTGGGATAGTTTCGATTTTCCTACGGATACGTTTTTGCCTGGGATGAGAGTGAAGGTGAACGCTAAAGAGGGAGTGAATCGTGCTTTCAGGTCTTGGAAATCTGCCAACGATCCAGCTCCAGGTGATTATTTCTCGGGGGTTGATCCTCGAGCAGCACCACAGCTTATGATATGGAATGGTTCAGAAAGAAGATGGAGAAGTGGGCACTGGAACAAGCTGATATTTATTGGTCTTCCCGAAATGCCCACTAGATACTCGGCTGGTTTTAGTCTTACGGATCGGCCAGACCAAAATGGGAGCAACTTCTTAACTTACACACCATGGAATGTGTCCGATAAGCTGAGGTTTCAAATTAGGTGGGATGGTTATGAAGAGCAATCTATTTGGGTGGAAGATATAAATGAGTGGGTTGTTCTTATGTCTCAGCCGAACAAGAGCACCGGGTGTGAGCTTTACAACAAGTGTGGGAACTTCGGGCTTTGTAGTGCATCAGATGCTAGTTGTGATTGTATGCAAGGATTTGAAAGAAAAAATTTGGGGAGTTGGTCATATGGGTGTTCTAGAAAGACCCCATTGAAGTGTCAGAGAAATAGTACTACTGATGAAGATGGTGAGGATGGTTTTGTGGCGGTGAAGTGTACAAAGGTGCCGGATTTTGCAGACTTGGTGGTGTCGTCAGGTCCACAGGTGACGTGTGAGCAGTCTTGTTTGAACAATTGTTCTTGCACTGCTTATGCAGATGTTTCTGGACTTGGTTGTATGCTTTGGACAATTGAGTTGGTGGATGTGCAGCAGTTTTCAAAGGGGGGAAACACCTTGTATGTTCGTGTTGCTCATGCCGATTTAGGTGGCAGCAAAAAGATATCCACTCTTGCGATATCTTTATTTTCTGTAGCGGGAGCAATCTTCATAGCTATCTTCATATTTCTTGTATGGAGGTTCAGAGCAAAACTTAAAGTGTTGCCCACTACTTCAATTTCATGGTTGAGAATCAGTGAAACACCAACACACAATGCTGGCAAGAGCAAAGAATTCTCAACAGAAATGTCAGGATCAGTTGACCCTACTGTAGATTGGAATCAAGTAAATGGACCTGATGATTTGCCATCATTCAGTTTTAACAGTGTAGCAGCTGCTACAGACCACTTTTCTCTAGTAAACAAGCTTGGGAATGGGGGATTTGGTACTGTCTACAAGGGAAACCTTCCAGGACTAGAAGAAATAGCTGTCAAGAGACTTTCGCAAGTATCTTGCCAAGGGTTGGAGGAGTTTAAGAATGAGATCAATTTGATTGCTAAATTGCAGCACAGGAATCTTGTTAGGCTATTAGGCTGTTGCATTGAAGGAGAAGAAAAGATGCTGCTATATGAATACATGCCAAACAAAAGCTTGGATTTCTTTCTTTTTGATGCAACCAGGCAAGCACTACTAAATTGGAGTAAACGCTTCATGATTATTGAAGGGATTGCACGAGGACTCCTGTATCTTCACAGAGATTCTAGACTTCGAATAATTCATCGAGACCTGAAAGCTAGCAACATTTTGCTAGATGAAGATATGATTCCCAAAATTTCTGACTTTGTGGTTATATGGCACCTGAATATGCAATGGAAGGCATGGAATCTCTGGAATGCAAATAAAGCAGAGGATCTTATTGATCCTTCCATTGCAGAAACTTGTAATCAAACTGAATTAATCAGATGCATACATGTTGCATTGTTGTGTGTACAAGATTCCGCAGATTCCAGACCAACAATGTCGGCCGTGGTGTTAATGCTGGAGAGTGAAACTGCAAATCTTCCATCGCCAAGAGAACCCATGTTTACTTCAATTAAGAGATATGTGGATACAACCTTTAGTACAGAAGAAGAAGCCCCTGATGTCGTATCCGTAAACCATGTCACAATCACAATGGTAGATGGAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

793

Amino Acids

88.19

Weight (kDa)

5.58

Isoelectric Point (pI)

38.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	81 - 183	1.4e-34	D-mannose binding lectin
S_locus_glycop	PF00954	215 - 327	1.5e-23	S-locus glycoprotein domain
PAN_2	PF08276	353 - 413	1.4e-15	PAN-like domain
Pkinase	PF00069	534 - 679	5e-26	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	535 - 679	1.7e-29	Protein tyrosine and serine/threonine kinase
DUF3403	PF11883	745 - 792	4.8e-09	Domain of unknown function (DUF3403)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61610 AT1G61610 AT4G21390 AT4G21390
fragaria_vesca	FvH4_3g03590 FvH4_3g03590 FvH4_3g03590 FvH4_3g03590 FvH4_3g03590
malus_domestica	MD05G1329600.v1.1 MD10G1306600.v1.1
prunus_persica	Prupe.4G033200_v2.0.a1
pyrus_communis	pycom05g30270 pycom10g25870
rosa_chinensis	RchiOBHm_Chr5g0005641
rosa_laevigata	RLG00000031314
rosa_multiflora	Rmu_co8421279.1_g000001
rosa_roxburghii	Rroxscaffold_1G00070190
rosa_rugosa	Rorug04G0417000
rosa_samantha	Rh5AG044400 Rh5BG043200 Rh5CG052000 Rh5DG043200
rosa_wichuraiana	Rw5G004470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1096, 2043
AccB7I	CCANNNNNTGG	1 cut(s)	1711
AccI	GTMKAC	1 cut(s)	1641
AciI	CCGC	3 cut(s)	1079, 1346, 2187
AclWI	GGATC	6 cut(s)	554, 587, 735, 1510, 2102, 2106
AcoI	YGGCCR	2 cut(s)	731, 2211
AcsI	RAATTY	4 cut(s)	5, 982, 1481, 2019
AcuI	CTGAAG	1 cut(s)	163
AdeI	CACNNNGTG	1 cut(s)	894
AfaI	GTAC	7 cut(s)	206, 221, 1045, 1090, 1636, 2178, 2311
AfiI	CCNNNNNNNGG	4 cut(s)	208, 278, 569, 1711
AflIII	ACRYGT	2 cut(s)	1142, 2158
AjiI	CACGTC	1 cut(s)	1143
AjnI	CCWGG	5 cut(s)	25, 487, 568, 1657, 1865
AloI	GAACNNNNNNTCC	2 cut(s)	182, 214
Alw21I	GWGCWC	2 cut(s)	22, 890
Alw26I	GTCTC	3 cut(s)	876, 1678, 1965
Alw44I	GTGCAC	1 cut(s)	18
AlwI	GGATC	6 cut(s)	554, 587, 735, 1510, 2102, 2106
AlwNI	CAGNNNCTG	1 cut(s)	32
Ama87I	CYCGRG	2 cut(s)	583, 597
AoxI	GGCC	3 cut(s)	115, 731, 2211
ApaLI	GTGCAC	1 cut(s)	18
ApeKI	GCWGC	7 cut(s)	602, 1240, 1302, 1580, 1583, 1753, 1810
ApoI	RAATTY	4 cut(s)	5, 982, 1481, 2019
AseI	ATTAAT	1 cut(s)	2144
AspS9I	GGNCC	3 cut(s)	115, 1130, 1541
AsuC2I	CCSGG	3 cut(s)	186, 202, 892
AsuHPI	GGTGA	6 cut(s)	334, 517, 584, 1073, 1093, 1150
AsuII	TTCGAA	2 cut(s)	165, 1957
AsuNHI	GCTAGC	1 cut(s)	1982
AvaI	CYCGRG	2 cut(s)	583, 597
AvaII	GGWCC	2 cut(s)	1130, 1541
BaeGI	GKGCMC	2 cut(s)	22, 657
BaeI	ACNNNNGTAYC	4 cut(s)	196, 229, 1916, 1949
BanI	GGYRCC	2 cut(s)	1096, 2043
BauI	CACGAG	1 cut(s)	1920
BbsI	GAAGAC	1 cut(s)	674
Bbv12I	GWGCWC	2 cut(s)	22, 890
BbvCI	CCTCAGC	1 cut(s)	791
BbvI	GCAGC	7 cut(s)	614, 1252, 1314, 1570, 1592, 1765, 1797
BccI	CCATC	9 cut(s)	305, 326, 636, 806, 1052, 1061, 1564, 2260, 2363
BceAI	ACGGC	2 cut(s)	148, 2198
BciT130I	CCWGG	5 cut(s)	27, 489, 570, 1659, 1867
BciVI	GTATCC	3 cut(s)	469, 2290, 2347
BcnI	CCSGG	3 cut(s)	186, 202, 892
BcoDI	GTCTC	3 cut(s)	876, 1678, 1965
BfaI	CTAG	9 cut(s)	357, 699, 948, 1011, 1604, 1664, 1950, 1983, 1997
BfmI	CTRYAG	4 cut(s)	390, 1341, 1518, 1587
BfuI	GTATCC	3 cut(s)	469, 2290, 2347
BisI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
BlsI	GCNGC	7 cut(s)	604, 1242, 1304, 1582, 1585, 1755, 1812
BmcAI	AGTACT	1 cut(s)	1045
Bme1390I	CCNGG	8 cut(s)	27, 186, 202, 489, 570, 892, 1659, 1867
Bme18I	GGWCC	2 cut(s)	1130, 1541
BmeT110I	CYCGRG	2 cut(s)	583, 597
BmgBI	CACGTC	1 cut(s)	1143
BmgT120I	GGNCC	3 cut(s)	115, 1130, 1541
BmiI	GGNNCC	2 cut(s)	1098, 2045
BmrFI	CCNGG	8 cut(s)	27, 186, 202, 489, 570, 892, 1659, 1867
BmrI	ACTGGG	1 cut(s)	179
BmsI	GCATC	5 cut(s)	934, 947, 1797, 1849, 2141
BmtI	GCTAGC	1 cut(s)	1986
BmuI	ACTGGG	1 cut(s)	179
BpiI	GAAGAC	1 cut(s)	674
BpmI	CTGGAG	3 cut(s)	309, 552, 2249
Bpu10I	CCTNAGC	1 cut(s)	791
Bpu14I	TTCGAA	2 cut(s)	165, 1957
BpuMI	CCSGG	3 cut(s)	186, 202, 892
BsaAI	YACGTR	1 cut(s)	208
BsaBI	GATNNNNATC	2 cut(s)	315, 1527
BsaI	GGTCTC	1 cut(s)	1965
BsaJI	CCNNGG	7 cut(s)	25, 40, 185, 488, 770, 1705, 2214
BsaWI	WCCGGW	2 cut(s)	237, 278
BsaXI	ACNNNNNCTCC	2 cut(s)	1911, 1941
Bsc4I	CCNNNNNNNGG	4 cut(s)	208, 278, 569, 1711
Bse1I	ACTGG	3 cut(s)	19, 174, 662
Bse3DI	GCAATG	3 cut(s)	367, 2063, 2115
Bse8I	GATNNNNATC	2 cut(s)	315, 1527
BseBI	CCWGG	5 cut(s)	27, 489, 570, 1659, 1867
BseDI	CCNNGG	7 cut(s)	25, 40, 185, 488, 770, 1705, 2214
BseGI	GGATG	4 cut(s)	498, 817, 1072, 1240
BseJI	GATNNNNATC	2 cut(s)	315, 1527
BseLI	CCNNNNNNNGG	4 cut(s)	208, 278, 569, 1711
BseMI	GCAATG	3 cut(s)	367, 2063, 2115
BseMII	CTCAG	2 cut(s)	782, 887
BseNI	ACTGG	3 cut(s)	19, 174, 662
BseRI	GAGGAG	1 cut(s)	1730
BseSI	GKGCMC	2 cut(s)	22, 657
BseX3I	CGGCCG	1 cut(s)	2211
BseXI	GCAGC	7 cut(s)	614, 1252, 1314, 1570, 1592, 1765, 1797
BsgI	GTGCAG	1 cut(s)	1259
Bsh1285I	CGRYCG	1 cut(s)	2214
BshFI	GGCC	3 cut(s)	117, 733, 2213
BshNI	GGYRCC	2 cut(s)	1096, 2043
BsiEI	CGRYCG	1 cut(s)	2214
BsiHKAI	GWGCWC	2 cut(s)	22, 890
BsiHKCI	CYCGRG	2 cut(s)	583, 597
BsiSI	CCGG	6 cut(s)	185, 202, 238, 279, 891, 1100
BslFI	GGGAC	1 cut(s)	184
BslI	CCNNNNNNNGG	4 cut(s)	208, 278, 569, 1711
BsmAI	GTCTC	3 cut(s)	876, 1678, 1965
BsmFI	GGGAC	1 cut(s)	184
BsmI	GAATGC	1 cut(s)	2086
BsnI	GGCC	3 cut(s)	117, 733, 2213
Bso31I	GGTCTC	1 cut(s)	1965
BsoBI	CYCGRG	2 cut(s)	583, 597
Bsp119I	TTCGAA	2 cut(s)	165, 1957
Bsp1286I	GDGCHC	3 cut(s)	22, 657, 890
Bsp1407I	TGTACA	2 cut(s)	1088, 2176
Bsp143I	GATC	8 cut(s)	144, 559, 592, 727, 1502, 1731, 2098, 2107
Bsp19I	CCATGG	1 cut(s)	770
BspACI	CCGC	3 cut(s)	1079, 1346, 2187
BspANI	GGCC	3 cut(s)	117, 733, 2213
BspCNI	CTCAG	2 cut(s)	783, 886
BspHI	TCATGA	1 cut(s)	1899
BspLI	GGNNCC	2 cut(s)	1098, 2045
BspMAI	CTGCAG	1 cut(s)	394
BspOI	GCTAGC	1 cut(s)	1986
BspPI	GGATC	6 cut(s)	554, 587, 735, 1510, 2102, 2106
BspQI	GCTCTTC	1 cut(s)	816
BspT104I	TTCGAA	2 cut(s)	165, 1957
BspT107I	GGYRCC	2 cut(s)	1096, 2043
BspTNI	GGTCTC	1 cut(s)	1965
BsrDI	GCAATG	3 cut(s)	367, 2063, 2115
BsrGI	TGTACA	2 cut(s)	1088, 2176
BsrI	ACTGG	3 cut(s)	19, 174, 662
BssECI	CCNNGG	7 cut(s)	25, 40, 185, 488, 770, 1705, 2214
BssMI	GATC	8 cut(s)	144, 559, 592, 727, 1502, 1731, 2098, 2107
BssSI	CACGAG	1 cut(s)	1920
BssT1I	CCWWGG	3 cut(s)	40, 770, 1705
Bst2BI	CACGAG	1 cut(s)	1920
Bst2UI	CCWGG	5 cut(s)	27, 489, 570, 1659, 1867
Bst4CI	ACNGT	3 cut(s)	1519, 1574, 1639
Bst6I	CTCTTC	2 cut(s)	199, 816
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstAUI	TGTACA	2 cut(s)	1088, 2176
BstBAI	YACGTR	1 cut(s)	208
BstBI	TTCGAA	2 cut(s)	165, 1957
BstC8I	GCNNGC	4 cut(s)	119, 1468, 1872, 1984
BstDEI	CTNAG	2 cut(s)	791, 873
BstDSI	CCRYGG	2 cut(s)	770, 2214
BstF5I	GGATG	4 cut(s)	498, 817, 1072, 1240
BstKTI	GATC	8 cut(s)	147, 562, 595, 730, 1505, 1734, 2101, 2110
BstMAI	GTCTC	3 cut(s)	876, 1678, 1965
BstMBI	GATC	8 cut(s)	144, 559, 592, 727, 1502, 1731, 2098, 2107
BstMCI	CGRYCG	1 cut(s)	2214
BstMWI	GCNNNNNNNGC	2 cut(s)	944, 2090
BstNI	CCWGG	5 cut(s)	27, 489, 570, 1659, 1867
BstNSI	RCATGY	2 cut(s)	1828, 2162
BstSCI	CCNGG	8 cut(s)	25, 184, 200, 487, 568, 890, 1657, 1865
BstSFI	CTRYAG	4 cut(s)	390, 1341, 1518, 1587
BstSLI	GKGCMC	2 cut(s)	22, 657
BstV1I	GCAGC	7 cut(s)	614, 1252, 1314, 1570, 1592, 1765, 1797
BstV2I	GAAGAC	1 cut(s)	674
BstX2I	RGATCY	1 cut(s)	2098
BstYI	RGATCY	1 cut(s)	2098
BstZI	CGGCCG	1 cut(s)	2211
BsuI	GTATCC	3 cut(s)	469, 2290, 2347
BsuRI	GGCC	3 cut(s)	117, 733, 2213
BtgI	CCRYGG	2 cut(s)	770, 2214
BtgZI	GCGATG	2 cut(s)	324, 2238
BtrI	CACGTC	1 cut(s)	1143
BtsCI	GGATG	4 cut(s)	498, 817, 1072, 1240
BtsI	GCAGTG	2 cut(s)	349, 1176
BtsIMutI	CAGTG	6 cut(s)	12, 349, 655, 1176, 1450, 1579
Cac8I	GCNNGC	4 cut(s)	119, 1468, 1872, 1984
CaiI	CAGNNNCTG	1 cut(s)	32
CciI	TCATGA	1 cut(s)	1899
Cfr13I	GGNCC	3 cut(s)	115, 1130, 1541
Csp6I	GTAC	7 cut(s)	205, 220, 1044, 1089, 1635, 2177, 2310
CspCI	CAANNNNNGTGG	4 cut(s)	788, 823, 895, 930
CviQI	GTAC	7 cut(s)	205, 220, 1044, 1089, 1635, 2177, 2310
DdeI	CTNAG	2 cut(s)	791, 873
DpnI	GATC	8 cut(s)	146, 561, 594, 729, 1504, 1733, 2100, 2109
DpnII	GATC	8 cut(s)	144, 559, 592, 727, 1502, 1731, 2098, 2107
DraI	TTTAAA	1 cut(s)	126
DraIII	CACNNNGTG	1 cut(s)	894
EaeI	YGGCCR	2 cut(s)	731, 2211
EagI	CGGCCG	1 cut(s)	2211
Eam1104I	CTCTTC	2 cut(s)	199, 816
EarI	CTCTTC	2 cut(s)	199, 816
EclXI	CGGCCG	1 cut(s)	2211
Eco130I	CCWWGG	3 cut(s)	40, 770, 1705
Eco31I	GGTCTC	1 cut(s)	1965
Eco32I	GATATC	2 cut(s)	1314, 1329
Eco47I	GGWCC	2 cut(s)	1130, 1541
Eco52I	CGGCCG	1 cut(s)	2211
Eco57I	CTGAAG	1 cut(s)	163
Eco88I	CYCGRG	2 cut(s)	583, 597
EcoRI	GAATTC	2 cut(s)	5, 1481
EcoRII	CCWGG	5 cut(s)	25, 487, 568, 1657, 1865
EcoRV	GATATC	2 cut(s)	1314, 1329
EcoT14I	CCWWGG	3 cut(s)	40, 770, 1705
EcoT22I	ATGCAT	1 cut(s)	2156
ErhI	CCWWGG	3 cut(s)	40, 770, 1705
FaqI	GGGAC	1 cut(s)	184
FauI	CCCGC	1 cut(s)	1339
FauNDI	CATATG	1 cut(s)	1000
FblI	GTMKAC	1 cut(s)	1641
Fnu4HI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
FokI	GGATG	4 cut(s)	505, 824, 1079, 1247
Fsp4HI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
FspBI	CTAG	9 cut(s)	357, 699, 948, 1011, 1604, 1664, 1950, 1983, 1997
GluI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
GsuI	CTGGAG	3 cut(s)	309, 552, 2249
HaeIII	GGCC	3 cut(s)	117, 733, 2213
HapII	CCGG	6 cut(s)	185, 202, 238, 279, 891, 1100
HincII	GTYRAC	2 cut(s)	297, 1510
HindII	GTYRAC	2 cut(s)	297, 1510
HindIII	AAGCTT	2 cut(s)	1613, 1837
HpaI	GTTAAC	1 cut(s)	297
HpaII	CCGG	6 cut(s)	185, 202, 238, 279, 891, 1100
HphI	GGTGA	6 cut(s)	334, 517, 584, 1073, 1093, 1150
Hpy188I	TCNGA	8 cut(s)	305, 634, 784, 943, 1035, 1394, 2026, 2150
HpyAV	CCTTC	8 cut(s)	172, 496, 1664, 1787, 1904, 2056, 2121, 2367
HpyCH4III	ACNGT	3 cut(s)	1519, 1574, 1639
HpyCH4IV	ACGT	3 cut(s)	207, 479, 1142
HpyF10VI	GCNNNNNNNGC	2 cut(s)	944, 2090
HpyF3I	CTNAG	2 cut(s)	791, 873
HpySE526I	ACGT	3 cut(s)	207, 479, 1142
KspAI	GTTAAC	1 cut(s)	297
Kzo9I	GATC	8 cut(s)	144, 559, 592, 727, 1502, 1731, 2098, 2107
LguI	GCTCTTC	1 cut(s)	816
LmnI	GCTCC	3 cut(s)	571, 747, 1349
Lsp1109I	GCAGC	7 cut(s)	614, 1252, 1314, 1570, 1592, 1765, 1797
LweI	GCATC	5 cut(s)	934, 947, 1797, 1849, 2141
MaeI	CTAG	9 cut(s)	357, 699, 948, 1011, 1604, 1664, 1950, 1983, 1997
MaeII	ACGT	3 cut(s)	207, 479, 1142
MaeIII	GTNAC	3 cut(s)	10, 1138, 2350
MalI	GATC	8 cut(s)	146, 561, 594, 729, 1504, 1733, 2100, 2109
MboI	GATC	8 cut(s)	144, 559, 592, 727, 1502, 1731, 2098, 2107
MfeI	CAATTG	2 cut(s)	1165, 1221
MflI	RGATCY	1 cut(s)	2098
MhlI	GDGCHC	3 cut(s)	22, 657, 890
MlyI	GAGTC	1 cut(s)	1920
MmeI	TCCRAC	1 cut(s)	1692
MnlI	CCTC	8 cut(s)	511, 606, 786, 1057, 1380, 1708, 1916, 2089
Mph1103I	ATGCAT	1 cut(s)	2156
MseI	TTAA	9 cut(s)	125, 296, 758, 1404, 1569, 1722, 2144, 2222, 2283
MslI	CAYNNNNRTG	3 cut(s)	1003, 1027, 2170
MspA1I	CMGCKG	1 cut(s)	1583
MspI	CCGG	6 cut(s)	185, 202, 238, 279, 891, 1100
MspR9I	CCNGG	8 cut(s)	27, 186, 202, 489, 570, 892, 1659, 1867
MunI	CAATTG	2 cut(s)	1165, 1221
Mva1269I	GAATGC	1 cut(s)	2086
MvaI	CCWGG	5 cut(s)	27, 489, 570, 1659, 1867
MwoI	GCNNNNNNNGC	2 cut(s)	944, 2090
NciI	CCSGG	3 cut(s)	186, 202, 892
NcoI	CCATGG	1 cut(s)	770
NdeI	CATATG	1 cut(s)	1000
NdeII	GATC	8 cut(s)	144, 559, 592, 727, 1502, 1731, 2098, 2107
NheI	GCTAGC	1 cut(s)	1982
NlaIV	GGNNCC	2 cut(s)	1098, 2045
NmeAIII	GCCGAG	1 cut(s)	686
NmuCI	GTSAC	3 cut(s)	10, 1138, 2350
NsiI	ATGCAT	1 cut(s)	2156
NspI	RCATGY	2 cut(s)	1828, 2162
NspV	TTCGAA	2 cut(s)	165, 1957
PaeR7I	CTCGAG	1 cut(s)	597
PagI	TCATGA	1 cut(s)	1899
PciI	ACATGT	1 cut(s)	2158
PciSI	GCTCTTC	1 cut(s)	816
PctI	GAATGC	1 cut(s)	2086
PflMI	CCANNNNNTGG	1 cut(s)	1711
PfoI	TCCNGGA	1 cut(s)	1657
PkrI	GCNGC	7 cut(s)	604, 1242, 1304, 1582, 1585, 1755, 1812
PleI	GAGTC	1 cut(s)	1920
PpsI	GAGTC	1 cut(s)	1920
Ppu21I	YACGTR	1 cut(s)	208
PscI	ACATGT	1 cut(s)	2158
PshBI	ATTAAT	1 cut(s)	2144
Psp6I	CCWGG	5 cut(s)	25, 487, 568, 1657, 1865
PspGI	CCWGG	5 cut(s)	25, 487, 568, 1657, 1865
PspN4I	GGNNCC	2 cut(s)	1098, 2045
PspPI	GGNCC	3 cut(s)	115, 1130, 1541
PspXI	VCTCGAGB	1 cut(s)	597
PstI	CTGCAG	1 cut(s)	394
PstNI	CAGNNNCTG	1 cut(s)	32
PsuI	RGATCY	1 cut(s)	2098
PvuII	CAGCTG	1 cut(s)	1583
RsaI	GTAC	7 cut(s)	206, 221, 1045, 1090, 1636, 2178, 2311
RsaNI	GTAC	7 cut(s)	205, 220, 1044, 1089, 1635, 2177, 2310
RseI	CAYNNNNRTG	3 cut(s)	1003, 1027, 2170
SapI	GCTCTTC	1 cut(s)	816
SaqAI	TTAA	9 cut(s)	125, 296, 758, 1404, 1569, 1722, 2144, 2222, 2283
SatI	GCNGC	7 cut(s)	603, 1241, 1303, 1581, 1584, 1754, 1811
Sau3AI	GATC	8 cut(s)	144, 559, 592, 727, 1502, 1731, 2098, 2107
Sau96I	GGNCC	3 cut(s)	115, 1130, 1541
ScaI	AGTACT	1 cut(s)	1045
SchI	GAGTC	1 cut(s)	1920
ScrFI	CCNGG	8 cut(s)	27, 186, 202, 489, 570, 892, 1659, 1867
SduI	GDGCHC	3 cut(s)	22, 657, 890
SfaNI	GCATC	5 cut(s)	934, 947, 1797, 1849, 2141
SfcI	CTRYAG	4 cut(s)	390, 1341, 1518, 1587
Sfr274I	CTCGAG	1 cut(s)	597
SfuI	TTCGAA	2 cut(s)	165, 1957
SinI	GGWCC	2 cut(s)	1130, 1541
SlaI	CTCGAG	1 cut(s)	597
SmiMI	CAYNNNNRTG	3 cut(s)	1003, 1027, 2170
SmlI	CTYRAG	1 cut(s)	597
SmoI	CTYRAG	1 cut(s)	597
SsiI	CCGC	3 cut(s)	1079, 1346, 2187
SspMI	CTAG	9 cut(s)	357, 699, 948, 1011, 1604, 1664, 1950, 1983, 1997
StyD4I	CCNGG	8 cut(s)	25, 184, 200, 487, 568, 890, 1657, 1865
StyI	CCWWGG	3 cut(s)	40, 770, 1705
TaaI	ACNGT	3 cut(s)	1519, 1574, 1639
TaiI	ACGT	3 cut(s)	210, 482, 1145
TaqI	TCGA	6 cut(s)	165, 328, 462, 598, 1957, 1969
TatI	WGTACW	4 cut(s)	1043, 1088, 2176, 2309
Tru1I	TTAA	9 cut(s)	125, 296, 758, 1404, 1569, 1722, 2144, 2222, 2283
Tru9I	TTAA	9 cut(s)	125, 296, 758, 1404, 1569, 1722, 2144, 2222, 2283
TscAI	CASTG	6 cut(s)	19, 349, 662, 1183, 1450, 1579
TseFI	GTSAC	3 cut(s)	10, 1138, 2350
TseI	GCWGC	7 cut(s)	602, 1240, 1302, 1580, 1583, 1753, 1810
Tsp45I	GTSAC	3 cut(s)	10, 1138, 2350
TspGWI	ACGGA	3 cut(s)	488, 740, 2329
TspRI	CASTG	6 cut(s)	19, 349, 662, 1183, 1450, 1579
Van91I	CCANNNNNTGG	1 cut(s)	1711
VneI	GTGCAC	1 cut(s)	18
VpaK11BI	GGWCC	2 cut(s)	1130, 1541
VspI	ATTAAT	1 cut(s)	2144
XapI	RAATTY	4 cut(s)	5, 982, 1481, 2019
XbaI	TCTAGA	2 cut(s)	1010, 1949
XceI	RCATGY	2 cut(s)	1828, 2162
XhoI	CTCGAG	1 cut(s)	597
XmiI	GTMKAC	1 cut(s)	1641
XspI	CTAG	9 cut(s)	357, 699, 948, 1011, 1604, 1664, 1950, 1983, 1997
ZrmI	AGTACT	1 cut(s)	1045
Zsp2I	ATGCAT	1 cut(s)	2156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.