FvH4_3g07730

Peroxisome biogenesis protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0015051
Physical Location & Seq
Reverse (-)
4535403 .. 4541182
5780 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g07730.t1

Sequence Viewer

Length: 960 bp
ATGCCGGTCTTCAAAACCCCATTCAACGGCTACTCCGTCAAGTTCAGCCCCTTCTACGAGTCCCGCCTCGCCGTCGCCACCTCCCAAAACTTCGGCATCCTCGGCAACGGCCGCCTCCACGTCATCGACCTCTCCCCCTCCCCTGGGCCCACCCCCGTCGCCGAGCTCATCTCCTTCGACACCGCCGACGGCGTCTACGACCTCGCCTGGTCCGAATCTCACGACTCCCTCCTCGTCGCCGCCATCGCCGACGGCTCCGTCAAGCTCTACGACCTCGCCCTCCCGCCGGCCTCCAACCCCCTCCGCTCTCTCCACGAGCACACGCGCGAGGTCAGCTCCGCCGACTACAACCCCACGCGCCGCGACTCCTTCCTCACCGCCTCCTGGGACGACACCGTCAAGCTCTGGACCGTCGATCGTCCGGCCTCCGTCCGGACGTTCAAGGAGCACGCCTACTGCGTCTACTCCGCCGTCTGGAACCCCCGCCACGCCGACGTCTTCGCCTCCGCCTCCGGCGACTGCACCGCACGCGTCTGGGACGTGCGTGAGCCCGGATCCACCATGATCATCCCGGCGCACGAGTTCGAGATCCTCTCCTGCGACTGGAACAAGTACGACGACTGCGTCATCGCCACCGCCTCCGTCGACAAGTCCATCAAGGTGTGGGACGTCCGGTCCATCCGAGCGCCGATCTCGGTGCTCAACGGCCACGGCTACGCCGTCAGGAAAGTCAAATTCTCGCCGCACCGGCAGAGCCTGATGATGTCGTGCTCGTACGACATGTCGGTTTGCCTCTGGGATTACATGGTGGAGGACGCGCTGGTGGGGCGGTATGATCACCACTCGGAGTTCGCCGTCGGAATCGATATGAGCGTGTTGGTGGAGGGACTTCTTGCCAGCACCGGCTGGGATGAGCTCGTCTATGTTTGGCAGCACGGTACCGATCCTAGAGCGCCTTGA

Protein Analysis

320

Amino Acids

35.53

Weight (kDa)

5.3

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_CDC20-Fz PF24807 37 - 183 2.7e-11 CDC20/Fizzy WD40 domain
Beta-prop_EIPR1 PF23609 54 - 136 2e-06 EIPR1 beta-propeller
WDR55 PF24796 61 - 226 2e-09 WDR55
WD40_Prp19 PF24814 61 - 183 4.8e-13 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 64 - 184 8.6e-06 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 65 - 154 3.4e-10 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 65 - 224 9.8e-18 WDR3 first beta-propeller domain
Beta-prop_Aladin PF25460 67 - 226 3.9e-06 Aladin seven-bladed propeller
Beta-prop_WDR3_2nd PF25172 73 - 180 2.7e-06 WDR3 second beta-propeller domain
WD40_Gbeta PF25391 102 - 310 4.5e-11 G protein beta WD-40 repeat protein
Beta-prop_THOC3 PF25174 107 - 202 1.2e-13 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 124 - 312 9.2e-29 WDR5 beta-propeller domain
Beta-prop_EIPR1 PF23609 153 - 266 4.1e-15 EIPR1 beta-propeller
Beta-prop_EML_2 PF23414 162 - 308 6.7e-09 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd PF25047 165 - 312 1.1e-10 TEP-1 second beta-propeller
WD40_MABP1-WDR62_2nd PF24782 169 - 272 1.1e-10 MABP1/WDR62 second WD40 domain
WD40_CDC20-Fz PF24807 178 - 281 4.4e-11 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 193 - 283 2e-12 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 193 - 315 2.2e-07 WDR3 second beta-propeller domain
WD40_Prp19 PF24814 196 - 284 1.2e-09 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 206 - 312 1.5e-12 WDR3 first beta-propeller domain
WD40 PF00400 230 - 267 1e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G29260
fragaria_vesca FvH4_3g07730
malus_domestica MD05G1300300.v1.1 MD10G1279400.v1.1
prunus_persica Prupe.4G062000_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0010881
rosa_laevigata RLG00000031794
rosa_multiflora Rmu_sc0000109.1_g000002
rosa_roxburghii Rroxscaffold_1G00065480
rosa_rugosa Rorug04G0453500
rosa_samantha Rh5AG086200 Rh5BG080400 Rh5CG092900 Rh5DG080600
rosa_wichuraiana Rw0G017460 Rw0G017910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 257, 395, 623
AatII GACGTC 2 cut(s) 498, 672
Acc65I GGTACC 1 cut(s) 938
AccB1I GGYRCC 1 cut(s) 938
AccBSI CCGCTC 1 cut(s) 306
AccI GTMKAC 3 cut(s) 195, 462, 645
AccII CGCG 6 cut(s) 325, 327, 358, 363, 531, 818
AccIII TCCGGA 1 cut(s) 432
AclWI GGATC 4 cut(s) 549, 562, 583, 938
AcoI YGGCCR 2 cut(s) 109, 706
AcsI RAATTY 1 cut(s) 734
AcyI GRCGYC 3 cut(s) 192, 495, 669
AfaI GTAC 3 cut(s) 614, 776, 940
AfiI CCNNNNNNNGG 8 cut(s) 26, 143, 144, 286, 384, 432, 474, 603
AflIII ACRYGT 2 cut(s) 529, 780
AgsI TTSAA 3 cut(s) 13, 25, 442
AhdI GACNNNNNGTC 1 cut(s) 673
AjiI CACGTC 2 cut(s) 121, 541
AjnI CCWGG 3 cut(s) 142, 206, 383
AluBI AGCT 5 cut(s) 166, 265, 336, 403, 916
AluI AGCT 5 cut(s) 166, 265, 336, 403, 916
Alw21I GWGCWC 6 cut(s) 168, 321, 450, 702, 773, 918
AlwI GGATC 4 cut(s) 549, 562, 583, 938
AlwNI CAGNNNCTG 1 cut(s) 757
Aor13HI TCCGGA 1 cut(s) 432
AoxI GGCC 5 cut(s) 109, 146, 288, 423, 706
ApaI GGGCCC 1 cut(s) 150
ApeKI GCWGC 1 cut(s) 931
ApoI RAATTY 1 cut(s) 734
Asp718I GGTACC 1 cut(s) 938
AspLEI GCGC 6 cut(s) 327, 360, 577, 688, 820, 955
AspS9I GGNCC 5 cut(s) 146, 147, 210, 408, 675
AsuC2I CCSGG 2 cut(s) 552, 572
AsuHPI GGTGA 2 cut(s) 367, 830
AvaII GGWCC 3 cut(s) 210, 408, 675
BaeGI GKGCMC 1 cut(s) 150
BamHI GGATCC 1 cut(s) 554
BanI GGYRCC 1 cut(s) 938
BanII GRGCYC 4 cut(s) 150, 168, 552, 918
BauI CACGAG 2 cut(s) 314, 578
BbsI GAAGAC 1 cut(s) 490
Bbv12I GWGCWC 6 cut(s) 168, 321, 450, 702, 773, 918
BbvI GCAGC 1 cut(s) 943
BccI CCATC 3 cut(s) 251, 662, 686
BcgI CGANNNNNNTGC 2 cut(s) 679, 713
BciT130I CCWGG 3 cut(s) 144, 208, 385
BclI TGATCA 2 cut(s) 564, 835
BcnI CCSGG 2 cut(s) 552, 572
BfaI CTAG 1 cut(s) 948
BfoI RGCGCY 2 cut(s) 689, 956
BglI GCCNNNNNGGC 1 cut(s) 748
BisI GCNGC 5 cut(s) 112, 240, 361, 743, 932
BlsI GCNGC 5 cut(s) 113, 241, 362, 744, 933
Bme1390I CCNGG 5 cut(s) 144, 208, 385, 552, 572
Bme18I GGWCC 3 cut(s) 210, 408, 675
BmeRI GACNNNNNGTC 1 cut(s) 673
BmgBI CACGTC 2 cut(s) 121, 541
BmgT120I GGNCC 5 cut(s) 146, 147, 210, 408, 675
BmiI GGNNCC 5 cut(s) 148, 256, 479, 556, 940
BmrFI CCNGG 5 cut(s) 144, 208, 385, 552, 572
BmsI GCATC 1 cut(s) 105
BpiI GAAGAC 1 cut(s) 490
BplI GAGNNNNNCTC 6 cut(s) 155, 187, 320, 352, 578, 610
BpuMI CCSGG 2 cut(s) 552, 572
Bsa29I ATCGAT 1 cut(s) 864
BsaHI GRCGYC 3 cut(s) 192, 495, 669
BsaJI CCNNGG 5 cut(s) 100, 142, 143, 384, 709
BsaWI WCCGGW 2 cut(s) 432, 672
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bsc4I CCNNNNNNNGG 8 cut(s) 26, 143, 144, 286, 384, 432, 474, 603
Bse118I RCCGGY 4 cut(s) 4, 286, 747, 902
Bse1I ACTGG 1 cut(s) 608
BseAI TCCGGA 1 cut(s) 432
BseBI CCWGG 3 cut(s) 144, 208, 385
BseCI ATCGAT 1 cut(s) 864
BseDI CCNNGG 5 cut(s) 100, 142, 143, 384, 709
BseGI GGATG 4 cut(s) 96, 567, 678, 916
BseLI CCNNNNNNNGG 8 cut(s) 26, 143, 144, 286, 384, 432, 474, 603
BseNI ACTGG 1 cut(s) 608
BseRI GAGGAG 1 cut(s) 221
BseSI GKGCMC 1 cut(s) 150
BseX3I CGGCCG 1 cut(s) 109
BseXI GCAGC 1 cut(s) 943
BseYI CCCAGC 1 cut(s) 906
BsgI GTGCAG 1 cut(s) 505
Bsh1236I CGCG 6 cut(s) 325, 327, 358, 363, 531, 818
Bsh1285I CGRYCG 2 cut(s) 112, 418
BshFI GGCC 5 cut(s) 111, 148, 290, 425, 708
BshNI GGYRCC 1 cut(s) 938
BshVI ATCGAT 1 cut(s) 864
BsiEI CGRYCG 2 cut(s) 112, 418
BsiHKAI GWGCWC 6 cut(s) 168, 321, 450, 702, 773, 918
BsiWI CGTACG 1 cut(s) 774
BslFI GGGAC 5 cut(s) 46, 401, 551, 680, 900
BslI CCNNNNNNNGG 8 cut(s) 26, 143, 144, 286, 384, 432, 474, 603
BsmFI GGGAC 5 cut(s) 46, 401, 551, 680, 900
BsnI GGCC 5 cut(s) 111, 148, 290, 425, 708
Bsp120I GGGCCC 1 cut(s) 146
Bsp1286I GDGCHC 8 cut(s) 150, 168, 321, 450, 552, 702, 773, 918
Bsp13I TCCGGA 1 cut(s) 432
Bsp143I GATC 7 cut(s) 415, 554, 564, 588, 690, 835, 943
BspANI GGCC 5 cut(s) 111, 148, 290, 425, 708
BspDI ATCGAT 1 cut(s) 864
BspEI TCCGGA 1 cut(s) 432
BspFNI CGCG 6 cut(s) 325, 327, 358, 363, 531, 818
BspLI GGNNCC 5 cut(s) 148, 256, 479, 556, 940
BspPI GGATC 4 cut(s) 549, 562, 583, 938
BspT107I GGYRCC 1 cut(s) 938
BsrBI CCGCTC 1 cut(s) 306
BsrFI RCCGGY 4 cut(s) 4, 286, 747, 902
BsrI ACTGG 1 cut(s) 608
BssAI RCCGGY 4 cut(s) 4, 286, 747, 902
BssECI CCNNGG 5 cut(s) 100, 142, 143, 384, 709
BssMI GATC 7 cut(s) 415, 554, 564, 588, 690, 835, 943
BssNI GRCGYC 3 cut(s) 192, 495, 669
BssSI CACGAG 2 cut(s) 314, 578
Bst2BI CACGAG 2 cut(s) 314, 578
Bst2UI CCWGG 3 cut(s) 144, 208, 385
Bst4CI ACNGT 3 cut(s) 397, 412, 938
BstACI GRCGYC 3 cut(s) 192, 495, 669
BstC8I GCNNGC 4 cut(s) 288, 450, 529, 898
BstDSI CCRYGG 1 cut(s) 709
BstF5I GGATG 4 cut(s) 96, 567, 678, 916
BstFNI CGCG 6 cut(s) 325, 327, 358, 363, 531, 818
BstH2I RGCGCY 2 cut(s) 689, 956
BstHHI GCGC 6 cut(s) 327, 360, 577, 688, 820, 955
BstKTI GATC 7 cut(s) 418, 557, 567, 591, 693, 838, 946
BstMBI GATC 7 cut(s) 415, 554, 564, 588, 690, 835, 943
BstMCI CGRYCG 2 cut(s) 112, 418
BstMWI GCNNNNNNNGC 7 cut(s) 102, 111, 245, 333, 528, 748, 826
BstNI CCWGG 3 cut(s) 144, 208, 385
BstNSI RCATGY 1 cut(s) 784
BstSCI CCNGG 5 cut(s) 142, 206, 383, 550, 570
BstSLI GKGCMC 1 cut(s) 150
BstUI CGCG 6 cut(s) 325, 327, 358, 363, 531, 818
BstV1I GCAGC 1 cut(s) 943
BstV2I GAAGAC 1 cut(s) 490
BstX2I RGATCY 2 cut(s) 554, 588
BstYI RGATCY 2 cut(s) 554, 588
BstZI CGGCCG 1 cut(s) 109
Bsu15I ATCGAT 1 cut(s) 864
BsuRI GGCC 5 cut(s) 111, 148, 290, 425, 708
BsuTUI ATCGAT 1 cut(s) 864
BtgI CCRYGG 1 cut(s) 709
BtgZI GCGATG 2 cut(s) 229, 613
BtrI CACGTC 2 cut(s) 121, 541
BtsCI GGATG 4 cut(s) 96, 567, 678, 916
Cac8I GCNNGC 4 cut(s) 288, 450, 529, 898
CaiI CAGNNNCTG 1 cut(s) 757
CfoI GCGC 6 cut(s) 327, 360, 577, 688, 820, 955
Cfr10I RCCGGY 4 cut(s) 4, 286, 747, 902
Cfr13I GGNCC 5 cut(s) 146, 147, 210, 408, 675
ClaI ATCGAT 1 cut(s) 864
CseI GACGC 5 cut(s) 181, 448, 520, 613, 824
Csp6I GTAC 3 cut(s) 613, 775, 939
CviAII CATG 3 cut(s) 562, 781, 805
CviQI GTAC 3 cut(s) 613, 775, 939
DpnI GATC 7 cut(s) 417, 556, 566, 590, 692, 837, 945
DpnII GATC 7 cut(s) 415, 554, 564, 588, 690, 835, 943
DrdI GACNNNNNNGTC 3 cut(s) 257, 395, 623
DriI GACNNNNNGTC 1 cut(s) 673
DseDI GACNNNNNNGTC 3 cut(s) 257, 395, 623
EaeI YGGCCR 2 cut(s) 109, 706
EagI CGGCCG 1 cut(s) 109
Eam1105I GACNNNNNGTC 1 cut(s) 673
EciI GGCGGA 3 cut(s) 328, 457, 496
Ecl136II GAGCTC 2 cut(s) 166, 916
EclXI CGGCCG 1 cut(s) 109
Eco24I GRGCYC 4 cut(s) 150, 168, 552, 918
Eco47I GGWCC 3 cut(s) 210, 408, 675
Eco52I CGGCCG 1 cut(s) 109
Eco53kI GAGCTC 2 cut(s) 166, 916
EcoICRI GAGCTC 2 cut(s) 166, 916
EcoRII CCWGG 3 cut(s) 142, 206, 383
EcoT38I GRGCYC 4 cut(s) 150, 168, 552, 918
FaeI CATG 3 cut(s) 565, 784, 808
FaiI YATR 6 cut(s) 563, 782, 806, 834, 869, 924
FaqI GGGAC 5 cut(s) 46, 401, 551, 680, 900
FatI CATG 3 cut(s) 561, 780, 804
FauI CCCGC 3 cut(s) 71, 291, 491
FbaI TGATCA 2 cut(s) 564, 835
FblI GTMKAC 3 cut(s) 195, 462, 645
Fnu4HI GCNGC 5 cut(s) 112, 240, 361, 743, 932
FokI GGATG 4 cut(s) 83, 554, 665, 923
FriOI GRGCYC 4 cut(s) 150, 168, 552, 918
Fsp4HI GCNGC 5 cut(s) 112, 240, 361, 743, 932
FspBI CTAG 1 cut(s) 948
GlaI GCGC 6 cut(s) 326, 359, 576, 687, 819, 954
GluI GCNGC 5 cut(s) 112, 240, 361, 743, 932
GsaI CCCAGC 1 cut(s) 910
HaeII RGCGCY 2 cut(s) 689, 956
HaeIII GGCC 5 cut(s) 111, 148, 290, 425, 708
HgaI GACGC 5 cut(s) 181, 448, 520, 613, 824
HhaI GCGC 6 cut(s) 327, 360, 577, 688, 820, 955
Hin1I GRCGYC 3 cut(s) 192, 495, 669
Hin1II CATG 3 cut(s) 565, 784, 808
Hin6I GCGC 6 cut(s) 325, 358, 575, 686, 818, 953
HinP1I GCGC 6 cut(s) 325, 358, 575, 686, 818, 953
HincII GTYRAC 1 cut(s) 646
HindII GTYRAC 1 cut(s) 646
HinfI GANTC 5 cut(s) 59, 215, 224, 365, 861
HphI GGTGA 2 cut(s) 367, 830
Hpy166II GTNNAC 3 cut(s) 196, 463, 646
Hpy188I TCNGA 4 cut(s) 214, 683, 847, 860
Hpy188III TCNNGA 6 cut(s) 221, 406, 433, 475, 586, 724
Hpy8I GTNNAC 3 cut(s) 196, 463, 646
HpyAV CCTTC 3 cut(s) 61, 184, 379
HpyCH4III ACNGT 3 cut(s) 397, 412, 938
HpyCH4IV ACGT 5 cut(s) 120, 437, 495, 540, 669
HpyCH4V TGCA 1 cut(s) 522
HpyF10VI GCNNNNNNNGC 7 cut(s) 102, 111, 245, 333, 528, 748, 826
HpySE526I ACGT 5 cut(s) 120, 437, 495, 540, 669
Hsp92I GRCGYC 3 cut(s) 192, 495, 669
Hsp92II CATG 3 cut(s) 565, 784, 808
HspAI GCGC 6 cut(s) 325, 358, 575, 686, 818, 953
Kpn2I TCCGGA 1 cut(s) 432
KpnI GGTACC 1 cut(s) 942
KroI GCCGGC 1 cut(s) 286
KroNI GCCGGC 1 cut(s) 288
Ksp22I TGATCA 2 cut(s) 564, 835
Kzo9I GATC 7 cut(s) 415, 554, 564, 588, 690, 835, 943
LmnI GCTCC 3 cut(s) 260, 341, 445
Lsp1109I GCAGC 1 cut(s) 943
LweI GCATC 1 cut(s) 105
MaeI CTAG 1 cut(s) 948
MaeII ACGT 5 cut(s) 120, 437, 495, 540, 669
MalI GATC 7 cut(s) 417, 556, 566, 590, 692, 837, 945
MbiI CCGCTC 1 cut(s) 306
MboI GATC 7 cut(s) 415, 554, 564, 588, 690, 835, 943
MboII GAAGA 1 cut(s) 490
MflI RGATCY 2 cut(s) 554, 588
MhlI GDGCHC 8 cut(s) 150, 168, 321, 450, 552, 702, 773, 918
MluCI AATT 1 cut(s) 734
MluI ACGCGT 1 cut(s) 529
MlyI GAGTC 3 cut(s) 68, 218, 359
MmeI TCCRAC 2 cut(s) 318, 838
MroI TCCGGA 1 cut(s) 432
MroNI GCCGGC 1 cut(s) 286
MslI CAYNNNNRTG 1 cut(s) 659
MspR9I CCNGG 5 cut(s) 144, 208, 385, 552, 572
MvaI CCWGG 3 cut(s) 144, 208, 385
MvnI CGCG 6 cut(s) 325, 327, 358, 363, 531, 818
MwoI GCNNNNNNNGC 7 cut(s) 102, 111, 245, 333, 528, 748, 826
NaeI GCCGGC 1 cut(s) 288
NciI CCSGG 2 cut(s) 552, 572
NdeII GATC 7 cut(s) 415, 554, 564, 588, 690, 835, 943
NgoMIV GCCGGC 1 cut(s) 286
NlaIII CATG 3 cut(s) 565, 784, 808
NlaIV GGNNCC 5 cut(s) 148, 256, 479, 556, 940
NmeAIII GCCGAG 2 cut(s) 81, 187
NspI RCATGY 1 cut(s) 784
PasI CCCWGGG 1 cut(s) 143
PciI ACATGT 1 cut(s) 780
PcsI WCGNNNNNNNCGW 8 cut(s) 33, 183, 195, 210, 456, 621, 717, 870
PdiI GCCGGC 1 cut(s) 288
PfeI GAWTC 2 cut(s) 215, 861
Pfl23II CGTACG 1 cut(s) 774
PflFI GACNNNGTC 3 cut(s) 191, 395, 623
PkrI GCNGC 5 cut(s) 113, 241, 362, 744, 933
Ple19I CGATCG 1 cut(s) 418
PleI GAGTC 3 cut(s) 67, 218, 359
PpsI GAGTC 3 cut(s) 67, 218, 359
PscI ACATGT 1 cut(s) 780
Psp124BI GAGCTC 2 cut(s) 168, 918
Psp6I CCWGG 3 cut(s) 142, 206, 383
PspFI CCCAGC 1 cut(s) 906
PspGI CCWGG 3 cut(s) 142, 206, 383
PspLI CGTACG 1 cut(s) 774
PspN4I GGNNCC 5 cut(s) 148, 256, 479, 556, 940
PspOMI GGGCCC 1 cut(s) 146
PspPI GGNCC 5 cut(s) 146, 147, 210, 408, 675
PstNI CAGNNNCTG 1 cut(s) 757
PsuI RGATCY 2 cut(s) 554, 588
PsyI GACNNNGTC 3 cut(s) 191, 395, 623
PvuI CGATCG 1 cut(s) 418
RsaI GTAC 3 cut(s) 614, 776, 940
RsaNI GTAC 3 cut(s) 613, 775, 939
RseI CAYNNNNRTG 1 cut(s) 659
SacI GAGCTC 2 cut(s) 168, 918
SalI GTCGAC 1 cut(s) 644
SatI GCNGC 5 cut(s) 112, 240, 361, 743, 932
Sau3AI GATC 7 cut(s) 415, 554, 564, 588, 690, 835, 943
Sau96I GGNCC 5 cut(s) 146, 147, 210, 408, 675
SchI GAGTC 3 cut(s) 68, 218, 359
ScrFI CCNGG 5 cut(s) 144, 208, 385, 552, 572
SduI GDGCHC 8 cut(s) 150, 168, 321, 450, 552, 702, 773, 918
SfaNI GCATC 1 cut(s) 105
SinI GGWCC 3 cut(s) 210, 408, 675
SmiMI CAYNNNNRTG 1 cut(s) 659
Sse9I AATT 1 cut(s) 734
SspMI CTAG 1 cut(s) 948
SstI GAGCTC 2 cut(s) 168, 918
StyD4I CCNGG 5 cut(s) 142, 206, 383, 550, 570
TaaI ACNGT 3 cut(s) 397, 412, 938
TaiI ACGT 5 cut(s) 123, 440, 498, 543, 672
TaqI TCGA 6 cut(s) 126, 177, 414, 585, 645, 864
TasI AATT 1 cut(s) 734
TauI GCSGC 4 cut(s) 114, 242, 363, 745
TfiI GAWTC 2 cut(s) 215, 861
TseI GCWGC 1 cut(s) 931
TspGWI ACGGA 4 cut(s) 25, 247, 418, 631
Tth111I GACNNNGTC 3 cut(s) 191, 395, 623
VpaK11BI GGWCC 3 cut(s) 210, 408, 675
XapI RAATTY 1 cut(s) 734
XceI RCATGY 1 cut(s) 784
XmiI GTMKAC 3 cut(s) 195, 462, 645
XspI CTAG 1 cut(s) 948
ZraI GACGTC 2 cut(s) 496, 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.